From 0d4ae71d75cfba76495f7417a6d42959d4740332 Mon Sep 17 00:00:00 2001 From: Nabil Ghodbane Date: Thu, 13 Apr 2023 09:12:34 +0200 Subject: [PATCH] add windows compilation scripts for PERSALYS: ongoing task --- products/compil_scripts/PERSALYS-v13.0.bat | 98 +++++ products/compil_scripts/YDEFX.bat | 66 +++ products/compil_scripts/cminpack-1.3.6.bat | 66 +++ products/compil_scripts/openturns-1.19.bat | 447 +++++++++++++++++++++ 4 files changed, 677 insertions(+) create mode 100644 products/compil_scripts/PERSALYS-v13.0.bat create mode 100644 products/compil_scripts/YDEFX.bat create mode 100644 products/compil_scripts/cminpack-1.3.6.bat create mode 100644 products/compil_scripts/openturns-1.19.bat diff --git a/products/compil_scripts/PERSALYS-v13.0.bat b/products/compil_scripts/PERSALYS-v13.0.bat new file mode 100644 index 0000000..a0be008 --- /dev/null +++ b/products/compil_scripts/PERSALYS-v13.0.bat @@ -0,0 +1,98 @@ +@echo off + +echo ########################################################################## +echo hdf5 %VERSION% +echo ########################################################################## + +IF NOT DEFINED SAT_DEBUG ( + SET SAT_DEBUG=0 +) + +SET PRODUCT_BUILD_TYPE=Release +if %SAT_DEBUG% == 1 ( + set PRODUCT_BUILD_TYPE=Debug +) + +if NOT exist "%PRODUCT_INSTALL%" mkdir %PRODUCT_INSTALL% + +REM clean BUILD directory +if exist "%BUILD_DIR%" rmdir /Q /S %BUILD_DIR% +mkdir %BUILD_DIR% + +SET CMAKE_OPTIONS=-DCMAKE_INSTALL_PREFIX:STRING=%PRODUCT_INSTALL:\=/% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DCMAKE_BUILD_TYPE:STRING=%PRODUCT_BUILD_TYPE% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DBUILD_SHARED_LIBS:BOOL=ON +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DADAO_ROOT_DIR=%ADAO_ROOT_DIR:\=/% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DBOOST_ROOT:PATH=%BOOST_ROOT_DIR:\=/% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DGUI_ROOT_DIR=%GUI_ROOT_DIR:\=/% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DSalomeGUI_DIR=%GUI_ROOT_DIR:\=/%/adm_local/cmake_files +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DKERNEL_ROOT_DIR=%KERNEL_ROOT_DIR:\=/% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DSalomeKERNEL_DIR=%KERNEL_ROOT_DIR:\=/%/salome_adm/cmake_files +REM SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DOpenTURNS_DIR=$OT_ROOT_DIR/lib/cmake/openturns +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DPy2cpp_DIR=%PY2CPP_ROOT_DIR:\=/%/lib/cmake/py2cpp +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DQWT_INCLUDE_DIR=%QWT_ROOT_DIR:\=/%/include +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DUSE_SPHINX=OFF +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DSPHINX_ROOT_DIR=%SPHINX_ROOT_DIR:\=/% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DYACS_ROOT_DIR=%YACS_ROOT_DIR:\=/% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DSalomeYACS_DIR=%YACS_ROOT_DIR:\=/%/adm/cmake +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -Dydefx_DIR=%YDEFX_ROOT_DIR:\=/%/salome_adm/cmake_files +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DAdaoCppLayer_INCLUDE_DIR=%ADAO_INTERFACE_ROOT_DIR:\=/%/include +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DAdaoCppLayer_ROOT_DIR=%ADAO_INTERFACE_ROOT_DIR:\=/% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DUSE_SALOME=ON +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DTBB_ROOT=%TBB_ROOT_DIR:\=/% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DTBB_INCLUDE_DIR=%TBB_ROOT_DIR:\=/%/include +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DPYTHON_EXECUTABLE=%PYTHONBIN:\=/% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DPYTHON_INCLUDE_DIR=%PYTHON_INCLUDE:\=/% +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DCMAKE_FIND_ROOT_PATH=ON +REM CMAKE_OPTIONS+=" -DSWIG_EXECUTABLE:PATH=$(which swig)" +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DCGNS_INCLUDE_DIR:PATH=%CGNS_ROOT_DIR:\=/%/include + +if defined CMAKE_GENERATOR ( + set CMAKE_OPTIONS=%CMAKE_OPTIONS% -DCMAKE_GENERATOR=%CMAKE_GENERATOR% +) else ( + set CMAKE_OPTIONS=%CMAKE_OPTIONS% -DCMAKE_GENERATOR="Visual Studio 15 2017 Win64" +) + +set MSBUILDDISABLENODEREUSE=1 + +cd %BUILD_DIR% + +echo. +echo -------------------------------------------------------------------------- +echo *** %CMAKE_ROOT%\bin\cmake %CMAKE_OPTIONS% %SOURCE_DIR% +echo -------------------------------------------------------------------------- + +%CMAKE_ROOT%\bin\cmake %CMAKE_OPTIONS% %SOURCE_DIR% +if NOT %ERRORLEVEL% == 0 ( + echo ERROR on CMake + exit 1 +) + +echo. +echo -------------------------------------------------------------------------- +echo *** msbuild %MAKE_OPTIONS% ALL_BUILD.vcxproj /p:Configuration=%PRODUCT_BUILD_TYPE% /p:Platform=x64 +echo -------------------------------------------------------------------------- + +msbuild %MAKE_OPTIONS% ALL_BUILD.vcxproj /p:Configuration=%PRODUCT_BUILD_TYPE% /p:Platform=x64 +if NOT %ERRORLEVEL% == 0 ( + echo ERROR on msbuild ALL_BUILD.vcxproj + exit 2 +) + +echo. +echo -------------------------------------------------------------------------- +echo *** msbuild %MAKE_OPTIONS% INSTALL.vcxproj /p:Configuration=%PRODUCT_BUILD_TYPE% /p:Platform=x64 +echo -------------------------------------------------------------------------- + +msbuild %MAKE_OPTIONS% INSTALL.vcxproj /p:Configuration=%PRODUCT_BUILD_TYPE% /p:Platform=x64 +if NOT %ERRORLEVEL% == 0 ( + echo ERROR on msbuild INSTALL.vcxproj + exit 3 +) + +taskkill /F /IM "mspdbsrv.exe" + +echo. +echo ########## END + + diff --git a/products/compil_scripts/YDEFX.bat b/products/compil_scripts/YDEFX.bat new file mode 100644 index 0000000..44347d8 --- /dev/null +++ b/products/compil_scripts/YDEFX.bat @@ -0,0 +1,66 @@ +@echo off + +echo ########################################################################## +echo YDEFX %VERSION% +echo ########################################################################## + +IF NOT DEFINED SAT_DEBUG ( + SET SAT_DEBUG=0 +) + +SET PRODUCT_BUILD_TYPE=Release + +REM TODO: NGH: not Tested yet +if %SAT_DEBUG% == 1 ( + set PRODUCT_BUILD_TYPE=Debug +) + +if NOT exist "%PRODUCT_INSTALL%" mkdir %PRODUCT_INSTALL% + +REM clean BUILD directory +if exist "%BUILD_DIR%" rmdir /Q /S %BUILD_DIR% +mkdir %BUILD_DIR% + +SET CMAKE_OPTIONS= +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DCMAKE_INSTALL_PREFIX:STRING=%PRODUCT_INSTALL:\=/% +set CMAKE_OPTIONS=%CMAKE_OPTIONS% -DCMAKE_BUILD_TYPE:STRING=%PRODUCT_BUILD_TYPE% +set CMAKE_OPTIONS=%CMAKE_OPTIONS% -DCMAKE_GENERATOR="Visual Studio 15 2017 Win64" + + +cd %BUILD_DIR% + +echo. +echo -------------------------------------------------------------------------- +echo *** %CMAKE_ROOT%\bin\cmake %CMAKE_OPTIONS% %SOURCE_DIR% +echo -------------------------------------------------------------------------- + +%CMAKE_ROOT%\bin\cmake %CMAKE_OPTIONS% %SOURCE_DIR% +if NOT %ERRORLEVEL% == 0 ( + echo ERROR on YDEFX + exit 1 +) + +echo. +echo -------------------------------------------------------------------------- +echo *** msbuild %MAKE_OPTIONS% /p:Configuration=Release ALL_BUILD.vcxproj +echo -------------------------------------------------------------------------- + +msbuild %MAKE_OPTIONS% /p:Configuration=%PRODUCT_BUILD_TYPE% /p:Platform=x64 ALL_BUILD.vcxproj +if NOT %ERRORLEVEL% == 0 ( + echo ERROR on msbuild ALL_BUILD.vcxproj + exit 2 +) + +echo. +echo -------------------------------------------------------------------------- +echo *** msbuild %MAKE_OPTIONS% /p:Configuration=%PRODUCT_BUILD_TYPE% /p:Platform=x64 INSTALL.vcxproj +echo -------------------------------------------------------------------------- + +msbuild %MAKE_OPTIONS% /p:Configuration=%PRODUCT_BUILD_TYPE% /p:Platform=x64 INSTALL.vcxproj +if NOT %ERRORLEVEL% == 0 ( + echo ERROR on msbuild INSTALL.vcxproj + exit 3 +) + +echo. +echo ########## END diff --git a/products/compil_scripts/cminpack-1.3.6.bat b/products/compil_scripts/cminpack-1.3.6.bat new file mode 100644 index 0000000..ed9cb9f --- /dev/null +++ b/products/compil_scripts/cminpack-1.3.6.bat @@ -0,0 +1,66 @@ +@echo off + +echo ########################################################################## +echo cminpack %VERSION% +echo ########################################################################## + +IF NOT DEFINED SAT_DEBUG ( + SET SAT_DEBUG=0 +) + +SET PRODUCT_BUILD_TYPE=Release + +REM TODO: NGH: not Tested yet +if %SAT_DEBUG% == 1 ( + set PRODUCT_BUILD_TYPE=Debug +) + +if NOT exist "%PRODUCT_INSTALL%" mkdir %PRODUCT_INSTALL% + +REM clean BUILD directory +if exist "%BUILD_DIR%" rmdir /Q /S %BUILD_DIR% +mkdir %BUILD_DIR% + +SET CMAKE_OPTIONS= +SET CMAKE_OPTIONS=%CMAKE_OPTIONS% -DCMAKE_INSTALL_PREFIX:STRING=%PRODUCT_INSTALL:\=/% +set CMAKE_OPTIONS=%CMAKE_OPTIONS% -DCMAKE_BUILD_TYPE:STRING=%PRODUCT_BUILD_TYPE% +set CMAKE_OPTIONS=%CMAKE_OPTIONS% -DCMAKE_GENERATOR="Visual Studio 15 2017 Win64" + + +cd %BUILD_DIR% + +echo. +echo -------------------------------------------------------------------------- +echo *** %CMAKE_ROOT%\bin\cmake %CMAKE_OPTIONS% %SOURCE_DIR% +echo -------------------------------------------------------------------------- + +%CMAKE_ROOT%\bin\cmake %CMAKE_OPTIONS% %SOURCE_DIR% +if NOT %ERRORLEVEL% == 0 ( + echo ERROR on cminpack + exit 1 +) + +echo. +echo -------------------------------------------------------------------------- +echo *** msbuild %MAKE_OPTIONS% /p:Configuration=Release ALL_BUILD.vcxproj +echo -------------------------------------------------------------------------- + +msbuild %MAKE_OPTIONS% /p:Configuration=%PRODUCT_BUILD_TYPE% /p:Platform=x64 ALL_BUILD.vcxproj +if NOT %ERRORLEVEL% == 0 ( + echo ERROR on msbuild ALL_BUILD.vcxproj + exit 2 +) + +echo. +echo -------------------------------------------------------------------------- +echo *** msbuild %MAKE_OPTIONS% /p:Configuration=%PRODUCT_BUILD_TYPE% /p:Platform=x64 INSTALL.vcxproj +echo -------------------------------------------------------------------------- + +msbuild %MAKE_OPTIONS% /p:Configuration=%PRODUCT_BUILD_TYPE% /p:Platform=x64 INSTALL.vcxproj +if NOT %ERRORLEVEL% == 0 ( + echo ERROR on msbuild INSTALL.vcxproj + exit 3 +) + +echo. +echo ########## END diff --git a/products/compil_scripts/openturns-1.19.bat b/products/compil_scripts/openturns-1.19.bat new file mode 100644 index 0000000..fdc7b80 --- /dev/null +++ b/products/compil_scripts/openturns-1.19.bat @@ -0,0 +1,447 @@ +#!/bin/bash + +echo "##########################################################################" +echo "openturns" $VERSION +echo "##########################################################################" + +# we don't install in python directory -> modify environment as described in INSTALL file + +#mkdir -p $PRODUCT_INSTALL/lib/python${PYTHON_VERSION}/site-packages +export PATH=$(pwd)/bin:$PATH +export PYTHONPATH=$(pwd):$PYTHONPATH +export PYTHONPATH=${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION}/site-packages:$PYTHONPATH + +CMAKE_OPTIONS="" +if [ -n "$SAT_HPC" ] && [ -n "$MPI_ROOT_DIR" ]; then + echo "WARNING: setting CC and CXX environment variables and target MPI wrapper" + CMAKE_OPTIONS+=" -DCMAKE_CXX_COMPILER:STRING=${MPI_CXX_COMPILER}" + CMAKE_OPTIONS+=" -DCMAKE_C_COMPILER:STRING=${MPI_C_COMPILER}" +fi + +CMAKE_OPTIONS+=" -DCMAKE_INSTALL_PREFIX:STRING=${PRODUCT_INSTALL}" +CMAKE_OPTIONS+=" -DCMAKE_INSTALL_LIBDIR:STRING=lib" +CMAKE_OPTIONS+=" -DCMAKE_BUILD_TYPE:STRING=Release" +CMAKE_OPTIONS+=" -DPYTHON_EXECUTABLE=${PYTHONBIN}" + +if [ -n "$SWIG_ROOT_DIR" ] && [ "$SAT_swig_IS_NATIVE" != "1" ]; then + CMAKE_OPTIONS+=" -DSWIG_EXECUTABLE=${SWIG_ROOT_DIR}/bin/swig" +fi + +if [ -n "$TBB_ROOT_DIR" ] && [ "$SAT_tbb_IS_NATIVE" != "1" ]; then + CMAKE_OPTIONS+=" -DTBB_ROOT_DIR=${TBB_ROOT_DIR}" + CMAKE_OPTIONS+=" -Dtbb_DIR=${TBB_ROOT_DIR}/lib/cmake" +fi + +# https://github.com/persalys/persalys/issues/745 +LINUX_DISTRIBUTION="$DIST_NAME$DIST_VERSION" +case $LINUX_DISTRIBUTION in + UB22*|CO8*|CO9*|FD36|FD37) + echo "WARNING: switching OFF TBB support" + CMAKE_OPTIONS+=" -DUSE_TBB=OFF" + ;; + *) + ;; +esac + +# Blas/Lapack +if [ -n "$LAPACK_ROOT_DIR" ] && [ "$SAT_lapack_IS_NATIVE" != "1" ]; then + CMAKE_OPTIONS+=" -DLAPACK_DIR=${LAPACK_ROOT_DIR}/lib/cmake/lapack-3.8.0" + CMAKE_OPTIONS+=" -DCBLAS_DIR=${LAPACK_ROOT_DIR}/lib/cmake/cblas-3.8.0" + CMAKE_OPTIONS+=" -DCBLAS_LIBRARIES=$LAPACK_ROOT_DIR/lib/libcblas.so" + CMAKE_OPTIONS+=" -DBLAS_LIBRARIES=$LAPACK_ROOT_DIR/lib/libblas.so" +fi + +### libxml2 settings +if [ -n "$LIBXML2_ROOT_DIR" ] && [ "$SAT_libxml2_IS_NATIVE" != "1" ]; then + CMAKE_OPTIONS+=" -DLIBXML2_INCLUDE_DIR:STRING=${LIBXML2_ROOT_DIR}/include/libxml2" + CMAKE_OPTIONS+=" -DLIBXML2_LIBRARIES:STRING=${LIBXML2_ROOT_DIR}/lib/libxml2.so" + CMAKE_OPTIONS+=" -DLIBXML2_XMLLINT_EXECUTABLE=${LIBXML2_ROOT_DIR}/bin/xmllint" +fi + +# HDF5 +if [ -n "$HDF5_ROOT_DIR" ] && [ "$SAT_hdf5_IS_NATIVE" != "1" ]; then + CMAKE_OPTIONS+=" -DHDF5_DIR:PATH=${HDF5_ROOT_DIR}/share/cmake/hdf5" + CMAKE_OPTIONS+=" -DHDF5_USE_STATIC_LIBRARIES:BOOL=OFF" + CMAKE_OPTIONS+=" -DHDF5_ROOT:PATH=${HDF5_ROOT_DIR}" + CMAKE_OPTIONS+=" -DHDF5_hdf5_LIBRARY_RELEASE=${HDF5_ROOT_DIR}/lib" + CMAKE_OPTIONS+=" -DHDF5_hdf5_hl_LIBRARY_RELEASE=${HDF5_ROOT_DIR}/lib/libhdf5_hl.so" + CMAKE_OPTIONS+=" -DHDF5_HL_LIBRARY=${HDF5_ROOT_DIR}/lib/libhdf5_hl.so" + CMAKE_OPTIONS+=" -DHDF5_C_INCLUDE_DIR=${HDF5_ROOT_DIR}/include" +fi + +# CMINPACK +if [ -n "$CMINPACK_ROOT_DIR" ] && [ "$SAT_cminpack_IS_NATIVE" != "1" ]; then + CMAKE_OPTIONS+=" -DCMINPACK_ROOT_DIR=${CMINPACK_ROOT_DIR}" + CMAKE_OPTIONS+=" -DCMINPACK_INCLUDE_DIR=${CMINPACK_ROOT_DIR}/include/cminpack-1" + CMAKE_OPTIONS+=" -DCMINPACK_LIBRARY=$CMINPACK_ROOT_DIR/lib/libcminpack_s.a" +else + CMAKE_OPTIONS+=" -DCMINPACK_ROOT_DIR=${CMINPACK_ROOT_DIR}" + CMAKE_OPTIONS+=" -DCMINPACK_INCLUDE_DIR=${CMINPACK_ROOT_DIR}/include/cminpack-1" +fi + +# Blas/Lapack +if [ -n "$LAPACK_ROOT_DIR" ] && [ "$SAT_lapack_IS_NATIVE" != "1" ]; then + CMAKE_OPTIONS+=" -DLAPACK_DIR=${LAPACK_ROOT_DIR}/lib/cmake/lapack-3.8.0" + CMAKE_OPTIONS+=" -DCBLAS_DIR=${LAPACK_ROOT_DIR}/lib/cmake/cblas-3.8.0" + CMAKE_OPTIONS+=" -DCBLAS_LIBRARIES=$LAPACK_ROOT_DIR/lib/libcblas.so" + CMAKE_OPTIONS+=" -DBLAS_LIBRARIES=$LAPACK_ROOT_DIR/lib/libblas.so" +fi + +if [[ $DIST_NAME == "CO" && $DIST_VERSION == "8" && -f /usr/lib64/libcblas.so && -f /usr/lib64/libblas.so ]]; then + CMAKE_OPTIONS+=" -DCBLAS_LIBRARIES=/usr/lib64/libcblas.so" + CMAKE_OPTIONS+=" -DBLAS_LIBRARIES=/usr/lib64/libblas.so" +fi + +### libxml2 settings +if [ -n "$LIBXML2_ROOT_DIR" ] && [ "$SAT_libxml2_IS_NATIVE" != "1" ]; then + CMAKE_OPTIONS+=" -DLIBXML2_INCLUDE_DIR:STRING=${LIBXML2_ROOT_DIR}/include/libxml2" + CMAKE_OPTIONS+=" -DLIBXML2_LIBRARIES:STRING=${LIBXML2_ROOT_DIR}/lib/libxml2.so" + CMAKE_OPTIONS+=" -DLIBXML2_XMLLINT_EXECUTABLE=${LIBXML2_ROOT_DIR}/bin/xmllint" +fi + +## nlopt +if [ -n "$NLOPT_ROOT_DIR" ] && [ "$SAT_nlopt_IS_NATIVE" != "1" ]; then + CMAKE_OPTIONS+=" -DNLOPT_INCLUDE_DIRS:STRING=${NLOPT_ROOT_DIR}/include" + CMAKE_OPTIONS+=" -DNLOPT_LIBRARIES:STRING=${NLOPT_ROOT_DIR}/lib" + CMAKE_OPTIONS+=" -DNLOPT_DIR:STRING=${NLOPT_ROOT_DIR}" +fi + +echo +echo "*** cmake" $CMAKE_OPTIONS + +rm -rf $BUILD_DIR +mkdir -p $BUILD_DIR/openturns +mkdir -p $BUILD_DIR/cache/pip + +# since we are using several nodes and share the same $HOME +# compilation can get screwed up. +# following this discussion: https://tex.stackexchange.com/questions/467824/is-it-possible-to-relocate-my-texmf-directory +# we define the following environment variables +export TEXMFHOME=$BUILD_DIR/texmf +export TEXMFVAR=$BUILD_DIR/texlive +export TEXMFCONFIG=$BUILD_DIR/texlive +mkdir -p $TEXMFHOME +mkdir -p $TEXMFVAR +mkdir -p $TEXMFCONFIG + +cd $BUILD_DIR/openturns +cmake $CMAKE_OPTIONS $SOURCE_DIR/openturns-1.19 +if [ $? -ne 0 ] +then + echo "ERROR on cmake" + exit 1 +fi + +echo +echo "*** make" $MAKE_OPTIONS +make $MAKE_OPTIONS +if [ $? -ne 0 ] +then + echo "ERROR on make" + exit 2 +fi + +echo +echo "*** make install" +make install +if [ $? -ne 0 ] +then + echo "ERROR on make install" + exit 3 +fi + +echo +echo "*** check installation" +if [! -d "${PRODUCT_INSTALL}/lib" ]; then + mkdir -p ${PRODUCT_INSTALL}/lib +fi + +if [ -d "${PRODUCT_INSTALL}/lib64" ]; then + echo "WARNING: moving lib64 to lib" + mv ${PRODUCT_INSTALL}/lib64/* ${PRODUCT_INSTALL}/lib/ + rmdir ${PRODUCT_INSTALL}/lib64 +elif [ -d "${PRODUCT_INSTALL}/local/lib64" ]; then + echo "WARNING: moving local/lib64 to lib" + mv ${PRODUCT_INSTALL}/local/lib64/* ${PRODUCT_INSTALL}/lib/ + rmdir ${PRODUCT_INSTALL}/local/lib64 +fi + +if [[ -d "${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION}/dist-packages" ]]; then + echo "WARNING: renaming ${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION}/dist-packages as ${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION}/site-packages" + cd ${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION} + ls -l + mv dist-packages site-packages + ls -l + cd $BUILD_DIR/openturns +fi + +export PYTHONPATH=${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION}/site-packages:${PYTHONPATH} +export LD_LIBRARY_PATH=${PRODUCT_INSTALL}/lib:${LD_LIBRARY_PATH} +chmod +x ${SOURCE_DIR}/openturns-1.19/python/test/t_features.py +${SOURCE_DIR}/openturns-1.19/python/test/t_features.py +if [ $? -ne 0 ] +then + echo "ERROR testing Openturns features...." + exit 4 +fi + +LD_LIBRARY_PATH_REF=${LD_LIBRARY_PATH} +if [[ -d "$SOURCE_DIR/otfftw-0.12" ]]; then + declare -A OTC + OTC["otagrum"]="0.6" + OTC["otfftw"]="0.12" + OTC["otmixmod"]="0.13" + OTC["otmorris"]="0.13" + OTC["otpmml"]="1.12" + OTC["otrobopt"]="0.11" + OTC["otsubsetinverse"]="1.9" + OTC["otsvm"]="0.11" + + for k in ${!OTC[@]}; + do + echo + echo "*** C O M P O N E N T : $k-${OTC[$k]} " + if [[ $k == "otagrum" ]]; then + echo "WARNING: skipping $k.." + continue + fi + cd $BUILD_DIR + mkdir ${BUILD_DIR}/$k + cd ${BUILD_DIR}/$k + CMAKE_EXTRA_OPTIONS= + if [[ $DIST_NAME == "CO" ]]; then + CMAKE_EXTRA_OPTIONS+=" -DBUILD_DOC=OFF" # needs extra latex modules on CentOS 7, 8 + CMAKE_EXTRA_OPTIONS+=" -DUSE_SPHINX=OFF" + fi + if [[ $k == "otmixmod" ]]; then + CMAKE_EXTRA_OPTIONS+=" -DBUILD_DOC=OFF" + CMAKE_EXTRA_OPTIONS+=" -DSOURCEFILES=$SOURCE_DIR/$k-${OTC[$k]}" + elif [[ $k == "otsubsetinverse" ]]; then + CMAKE_EXTRA_OPTIONS+=" -DOPENTURNS_HOME=$PRODUCT_INSTALL" + CMAKE_EXTRA_OPTIONS+=" -DCMAKE_SKIP_INSTALL_RPATH:BOOL=ON" + CMAKE_EXTRA_OPTIONS+=" -DUSE_SPHINX=OFF" + elif [[ $k == "otfftw" ]]; then + CMAKE_EXTRA_OPTIONS+=" -DBUILD_DOC=OFF" + elif [[ $k == "otmorris" ]]; then + case $LINUX_DISTRIBUTION in + DB*|FD*|UB*) + echo "WARNING: switching OFF documentation build" + CMAKE_EXTRA_OPTIONS+=" -DBUILD_DOC=OFF" + CMAKE_EXTRA_OPTIONS+=" -DUSE_SPHINX=OFF" # missing package to be installed. + ;; + esac + elif [[ $k == "otrobopt" ]]; then + case $LINUX_DISTRIBUTION in + DB*|FD*|UB*) + echo "WARNING: switching OFF documentation build" + CMAKE_EXTRA_OPTIONS+=" -DBUILD_DOC=OFF" + CMAKE_EXTRA_OPTIONS+=" -DUSE_SPHINX=OFF" # missing package to be installed. + ;; + esac + elif [[ $k == "otsvm" ]]; then + case $LINUX_DISTRIBUTION in + DB*|FD*|UB*) + echo "WARNING: switching OFF documentation build" + CMAKE_EXTRA_OPTIONS+=" -DBUILD_DOC=OFF" + CMAKE_EXTRA_OPTIONS+=" -DUSE_SPHINX=OFF" # missing package to be installed. + ;; + esac + elif [[ $k == "otpmml" ]]; then + CMAKE_EXTRA_OPTIONS+=" -DBUILD_DOC=OFF" + fi + + echo + echo "*** cmake " $CMAKE_OPTIONS ${CMAKE_EXTRA_OPTIONS} $SOURCE_DIR/$k-${OTC[$k]} + cmake $CMAKE_OPTIONS ${CMAKE_EXTRA_OPTIONS} $SOURCE_DIR/$k-${OTC[$k]} + if [ $? -ne 0 ] + then + echo "ERROR on cmake" + exit 1 + fi + + echo + echo "*** make" $MAKE_OPTIONS + make $MAKE_OPTIONS + if [ $? -ne 0 ] + then + echo "ERROR on make" + exit 2 + fi + + echo + echo "*** make install" + make install + if [ $? -ne 0 ] + then + echo "ERROR on make install" + exit 3 + fi + done + + declare -A OTP + OTP["otfmi"]="0.15" + OTP["otpod"]="0.6.8" + OTP["otwrapy"]="0.11" + for k in ${!OTP[@]}; + do + echo + echo "*** C O M P O N E N T : $k-${OTP[$k]} " + + if [ "$SAT_Python_IS_NATIVE" == "1" ]; then + if [ $k == "otfmi" ]; then + echo "INFO: install dill-0.3.4" + ${PYTHONBIN} -m pip install --cache-dir=$BUILD_DIR/cache/pip $SOURCE_DIR/dill-0.3.4/dill-0.3.4-py2.py3-none-any.whl --no-deps --prefix=$PRODUCT_INSTALL + if [ $? -ne 0 ] + then + echo "FATAL: could not install dill-0.3.4" + exit 6 + fi + elif [ $k == "otpod" ]; then + if [[ $DIST_NAME == "CO" && $DIST_VERSION == "8" ]]; then + echo "*** skipping: since system Cython too old" + continue + fi + echo "INFO: install scikit-learn-0.24.2" + ${PYTHONBIN} -m pip install --cache-dir=$BUILD_DIR/cache/pip $SOURCE_DIR/scikit-learn-0.24.2/scikit-learn-0.24.2.tar.gz --no-deps --prefix=$PRODUCT_INSTALL + if [ $? -ne 0 ] + then + echo "FATAL: could not install scikit-0.24.2" + exit 6 + fi + echo "INFO: install threadpoolctl-3.0.0" + ${PYTHONBIN} -m pip install --cache-dir=$BUILD_DIR/cache/pip $SOURCE_DIR/threadpoolctl-3.0.0/threadpoolctl-3.0.0-py3-none-any.whl --no-deps --prefix=$PRODUCT_INSTALL + if [ $? -ne 0 ] + then + echo "FATAL: could not install threadpoolctl 3.0.0" + exit 6 + fi + fi + else # non native Python + if [[ $k == "otfmi" ]]; then + echo "INFO: install dill-0.3.4" + ${PYTHONBIN} -m pip install --cache-dir=$BUILD_DIR/cache/pip $SOURCE_DIR/dill-0.3.4/dill-0.3.4-py2.py3-none-any.whl --no-deps + if [ $? -ne 0 ] + then + echo "FATAL: could not install dikk-0.3.4" + exit 5 + fi + elif [[ $k == "otpod" ]]; then + echo "INFO: install threadpoolctl-3.0.0" + ${PYTHONBIN} -m pip install --cache-dir=$BUILD_DIR/cache/pip $SOURCE_DIR/threadpoolctl-3.0.0/threadpoolctl-3.0.0-py3-none-any.whl --no-deps + if [ $? -ne 0 ] + then + echo "FATAL: could not install readpoolctl 3.0.0" + exit 6 + fi + echo "INFO: install joblib-1.1.0" + ${PYTHONBIN} -m pip install --cache-dir=$BUILD_DIR/cache/pip $SOURCE_DIR/joblib-1.1.0/joblib-1.1.0-py2.py3-none-any.whl --no-deps + if [ $? -ne 0 ] + then + echo "FATAL: could not install joblib-1.1.0" + exit 6 + fi + echo "INFO: install decorator-5.1.0" + ${PYTHONBIN} -m pip install --cache-dir=$BUILD_DIR/cache/pip $SOURCE_DIR/decorator-5.1.0/decorator-5.1.0-py3-none-any.whl --no-deps + if [ $? -ne 0 ] + then + echo "FATAL: could not install decorator-5.1.0" + exit 6 + fi + echo "INFO: install scikit-learn-0.24.2" + ${PYTHONBIN} -m pip install --cache-dir=$BUILD_DIR/cache/pip $SOURCE_DIR/scikit-learn-0.24.2/scikit-learn-0.24.2.tar.gz --no-deps + if [ $? -ne 0 ] + then + echo "FATAL: could not install scikit-0.24.2" + exit 6 + fi + fi + fi + + cd $BUILD_DIR + mkdir ${BUILD_DIR}/$k + cd ${BUILD_DIR}/$k + cp -R $SOURCE_DIR/$k-${OTP[$k]}/* . + # + $PYTHONBIN setup.py build + if [ $? -ne 0 ] + then + echo "ERROR on ${PYTHONBIN} setup.py build" + exit 4 + fi + # + $PYTHONBIN setup.py install --prefix=$PRODUCT_INSTALL + if [ $? -ne 0 ] + then + echo "ERROR on ${PYTHONBIN} setup.py install --prefix=$PRODUCT_INSTALL" + exit 5 + fi + done + + # + # O P E N T U R N S + # + if [ -f ${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION}/site-packages/site.py ]; then + echo "INFO: site.py already installed" + elif [ "$SAT_Python_IS_NATIVE" == "1" ]; then + # check first whether the init.py file is installed + echo "WARNING: missing init.py file. Installing it from system Python installation" + SITE_PATCH= + LINUX_DISTRIBUTION="$DIST_NAME$DIST_VERSION" + case $LINUX_DISTRIBUTION in + DB11) + SITE_PATCH=/usr/lib/pypy/dist-packages/setuptools/site-patch.py + ;; + DB10) + SITE_PATCH=/usr/lib/python3/dist-packages/setuptools/site-patch.py + ;; + UB22*) + SITE_PATCH=/usr/lib/pypy/dist-packages/setuptools/site-patch.py + ;; + UB20*) + SITE_PATCH=/usr/lib/python3/dist-packages/setuptools/site-patch.py + ;; + FD32) + SITE_PATCH=/usr/lib/python3.8/site-packages/setuptools/site-patch.py + ;; + FD34) + SITE_PATCH=$SOURCE_DIR/addons/site-patch.py + ;; + FD36) + SITE_PATCH=$SOURCE_DIR/addons/site-patch.py + ;; + FD37) + SITE_PATCH=$SOURCE_DIR/addons/site-patch.py + ;; + CO8*) + SITE_PATCH=/usr/lib/pypy/dist-packages/setuptools/site-patch.py + ;; + *) + SITE_PATCH=$SOURCE_DIR/addons/site-patch.py + ;; + esac + # check whether this file exists + if [ "${SITE_PATCH}" == "" ]; then + cp $SOURCE_DIR/addons/site-patch.py ${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION}/site-packages/site.py + else + cp $SITE_PATCH ${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION}/site-packages/site.py + fi + elif [ -f ${PYTHON_ROOT_DIR}/lib/python${PYTHON_VERSION}/site-packages/setuptools/site-patch.py ]; then + cp ${PYTHON_ROOT_DIR}/lib/python${PYTHON_VERSION}/site-packages/setuptools/site-patch.py ${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION}/site-packages/site.py + else + echo "ERROR: could not find site-patch.py" + exit 7 + fi +fi + +cd ${PRODUCT_INSTALL}/lib +# On some nodes, the link to OT is not done properly. +# In addition to this issue, it seems that there is a bug in openturns 1.19 which uses 20 instead of 19 as suffix. +if [[ ! -f libOT.so.0 ]]; then + echo "INFO: Fixing libOT.so" + ln -sf libOT.so.0.20.0 libOT.so.0.20 + ln -sf libOT.so.0.20 libOT.so.0 + ln -sf libOT.so.0 libOT.so +fi + +echo +echo "########## END" -- 2.39.2