abn [Wed, 7 Feb 2024 10:26:08 +0000 (11:26 +0100)]
[TetraIntersect] This test can be re-activated.
abn [Wed, 7 Feb 2024 10:09:10 +0000 (11:09 +0100)]
[TetraIntersect] Settting TransformedTriangle::THRESHOLD to 100
+ see previous commit : we can not keep 20 because of P1P1 intersector which uses
barycentric computation. A small threshold produces sometimes more
intersection points, which disturbs the (improper) barycentric
computation.
abn [Thu, 25 Jan 2024 19:37:39 +0000 (20:37 +0100)]
[TetraIntersec] Several bug fixes in Grandy's implementation
+ triple product inconsistency was not properly detected (now using original deltas from douple prod computation)
+ f/F factor set to 20 (not 500) as in Grandy's article -> (will be set to 100, see next commit)
+ epsilonEqual used when necessary: when it provides more points in polygon A or B (risk is completely missing a point in polygon!)
+ better handling of degenerated case where PQR triangle is in h=0
plane, or when P,Q or R close to a tet corner
+ fixed surface-edge intersection test: triple product equality (and zeroing) must be checked with care
+ using 'long double' is not necessary -> double are enough
abn [Mon, 5 Feb 2024 16:07:36 +0000 (17:07 +0100)]
[TetraIntersect] Formatting and including what's inline really inline!
(nothing new in this commit)
+ better log (corner, edge, ... names)
+ and various other minor formattings ...
Nabil Ghodbane [Thu, 1 Feb 2024 10:30:24 +0000 (11:30 +0100)]
bos #40795 [CEA] COTECH 156.2 - Check if native HDF5 can be used for DB10 version
Anthony Geay [Wed, 31 Jan 2024 12:32:39 +0000 (13:32 +0100)]
Small doc into test used to make connection between client and server for IA
abn [Thu, 21 Dec 2023 09:11:24 +0000 (10:11 +0100)]
[OverlapDEC] valgrind on uninitialized array of bool
abn [Wed, 13 Dec 2023 21:08:10 +0000 (22:08 +0100)]
[OverlapDEC] Fixing ODEC work algo sharing 1
abn [Thu, 7 Dec 2023 20:03:47 +0000 (21:03 +0100)]
[OverlapDEC] Bug fix for transfer of multi-compo field
+ adding tests illustrating transfer of several fields
+ doc and minor fix in workSharing algo (was improperly identifying less loaded proc -> should not impact result, just balancing)
+ C++ style loops
+ more debug info
mbs [Sat, 20 Jan 2024 13:58:55 +0000 (13:58 +0000)]
Updated copyright comment
jfa [Sat, 13 Jan 2024 00:09:25 +0000 (00:09 +0000)]
Merge branch 'V9_12_BR'
NATHALIE GORE [Mon, 18 Dec 2023 08:47:54 +0000 (09:47 +0100)]
add test for Nan - computeTriangleHeight
NATHALIE GORE [Fri, 15 Dec 2023 07:20:15 +0000 (08:20 +0100)]
Fix computation height of isocel triangle with base equal zero : NaN
jfa [Mon, 20 Nov 2023 18:26:53 +0000 (18:26 +0000)]
Increment version: 9.12.0
abn [Thu, 9 Nov 2023 20:12:20 +0000 (21:12 +0100)]
Expose MPI configuration in CMake export file.
Anida Khizar [Tue, 3 Oct 2023 08:53:53 +0000 (10:53 +0200)]
[ParaMEDFileMesh] geometric type is passed as an argument for fields partial loading
abn [Mon, 23 Oct 2023 14:38:34 +0000 (16:38 +0200)]
New method: getHiddenCppPointerAsLongLong()
+ useful for mixed wrapping tools, for example mixing MEDCoupling's SWIG
and PyBind11/Nanobind
Anthony Geay [Thu, 17 Aug 2023 13:55:09 +0000 (15:55 +0200)]
[
EDF28448] : MEDFileUMesh.declarePartsUpdated and MEDFileField1TS context manager dealing with file and not file situation indifferently
Anthony Geay [Wed, 16 Aug 2023 08:16:04 +0000 (10:16 +0200)]
[
EDF27375] : Add InterpKernelDEC.synchronizeWithDefaultValue and retrieveNonFetchedIds methods
Anthony Geay [Mon, 14 Aug 2023 08:43:38 +0000 (10:43 +0200)]
[
EDF27860] : MEDCouplingUMesh.getCellsContainingPoints eps parameter specifies a balls radius relative to the conidered cell
Anthony Geay [Fri, 11 Aug 2023 07:55:19 +0000 (09:55 +0200)]
[
EDF27988] : Implementation of MEDCouplingUMesh.explodeMeshTo for MEDFileUMesh.reduceToCells
Anthony Geay [Mon, 7 Aug 2023 14:29:10 +0000 (16:29 +0200)]
[
EDF27859] : Correct bug in case of HEXA/HEXA in P1P0 mode with PLANAR_FACE5 / PLANAR_FACE6 / GENERAL_24
Anthony Geay [Mon, 7 Aug 2023 14:22:09 +0000 (16:22 +0200)]
[
EDF27859] : In salome test mechanism : explicit python executable.
Anthony Geay [Fri, 4 Aug 2023 07:39:13 +0000 (09:39 +0200)]
[
EDF28170] : management of structure elements pipes using SEG4 elements. Management of Gauss Points on SEG4 cell types
jfa [Wed, 19 Jul 2023 15:11:46 +0000 (16:11 +0100)]
Merge branch 'V9_11_BR'
mbs [Mon, 19 Jun 2023 16:54:13 +0000 (17:54 +0100)]
updated copyright message
mbs [Fri, 16 Jun 2023 18:59:09 +0000 (19:59 +0100)]
updated copyright message
abn [Mon, 12 Jun 2023 19:49:45 +0000 (21:49 +0200)]
Bug fix: isColinear3D() was using wrongly dimensionned epsilon
Anthony Geay [Mon, 5 Jun 2023 05:55:32 +0000 (07:55 +0200)]
[KW103] : Fix invalid usage of CMAKE_DEPENDENT_OPTION
jfa [Thu, 25 May 2023 13:55:03 +0000 (14:55 +0100)]
Increment version: 9.11.0
abn [Tue, 16 May 2023 07:42:18 +0000 (09:42 +0200)]
Minor: wider exception check in *DEC test
abn [Fri, 12 May 2023 13:10:52 +0000 (15:10 +0200)]
[DEC] Enhance ctors on Python side to accept mpi4py communicators
+ factory pattern with 'New' static method
+ can use 'MPI._addressof(<my_communicator>)' in direct constructors
abn [Mon, 15 May 2023 11:47:12 +0000 (13:47 +0200)]
New feature: colinearizeEdges(): merge colinear edges of polyhedrons
+ typically to be used after simplifyPolyhedra()
abn [Tue, 25 Apr 2023 19:23:08 +0000 (21:23 +0200)]
Doc: indicating how to pass MPI_Comm from mpi4py
Nabil Ghodbane [Mon, 17 Apr 2023 12:17:36 +0000 (14:17 +0200)]
fix compilation issues. Tested on all supported Linux distributions:
- CentOS 7, 8
- Debian 9,10, 11
- Fedora 32, 34, 36, 37
- Ubuntu 20.04, 22.04
abn [Mon, 17 Apr 2023 09:04:31 +0000 (11:04 +0200)]
Portability: Mac
abn [Fri, 14 Apr 2023 12:00:17 +0000 (14:00 +0200)]
Minor: exception propagation when scipy not available was buggy
Anida Khizar [Fri, 17 Mar 2023 13:46:53 +0000 (14:46 +0100)]
[Bug fix] faces duplication during partitioning
Anida Khizar [Wed, 11 Jan 2023 14:48:19 +0000 (15:48 +0100)]
[Partial load] Implementation of a partial parallel load (of mesh and field) from a user-defined partition
Nabil Ghodbane [Tue, 21 Mar 2023 12:14:09 +0000 (13:14 +0100)]
Fix MEDCoupling tests currently failing on Windows OS:
1/ fix import in python scripts
2/ fix PYTHONPATH search path in CTestTestfileInstall.cmake consistently for Windows
3/ Implement Linux which equivalent command on Windows
Taking into account code review as discussed in this pull request: https://codev-tuleap.cea.fr/plugins/git/?action=pull-requests&repo_id=146&group_id=116#/pull-requests/2456/overview
Anthony Geay [Wed, 15 Mar 2023 09:52:41 +0000 (10:52 +0100)]
[
EDF27364] : Partial connectivity only extraction of cells of a mesh (MEDFileUMesh.LoadConnectivityOnlyPartOf)
abn [Mon, 13 Mar 2023 12:12:25 +0000 (13:12 +0100)]
Bug fix: findCellIdsOnBoundary() wrongly throwing if void mesh.
abn [Fri, 3 Mar 2023 11:57:50 +0000 (12:57 +0100)]
Minor: buildInnerBoundary(): degenerated case was not handled properly.
When a cell of the cracking group is on the skin of the initial mesh
it should be discarded.
abn [Fri, 10 Mar 2023 17:20:20 +0000 (18:20 +0100)]
MEDFile -> write40 functionality
Anthony Geay [Thu, 2 Mar 2023 12:18:07 +0000 (13:18 +0100)]
[
EDF27213] : Fix VTK version detection
Anthony Geay [Wed, 15 Feb 2023 09:02:31 +0000 (10:02 +0100)]
New references checked for PYRA5 due to modification of shape function in
fd8dbd34764 commit
Anthony Geay [Wed, 8 Feb 2023 12:54:05 +0000 (13:54 +0100)]
Implement all derivatives for a shape functions based on ASTER implementation. Thank you to Emmanuelle.
Anthony Geay [Tue, 31 Jan 2023 08:27:55 +0000 (09:27 +0100)]
[
EDF26877] : management of computation of measure field on field on Gauss Point in the special case where SpaceDim is not equal to MeshDim
Anthony Geay [Mon, 23 Jan 2023 16:29:31 +0000 (17:29 +0100)]
[
EDF26877] : Improvement of precision of integral computation of fields on Gauss Points. Only configuration with spaceDim == meshDim suported for the moment
abn [Fri, 27 Jan 2023 15:34:50 +0000 (16:34 +0100)]
Minor: portability on MacOS
Antoine KARCHER [Mon, 16 Jan 2023 09:43:30 +0000 (10:43 +0100)]
Fix MEDCOUPLING compilation issue on Windows
Anthony Geay [Wed, 4 Jan 2023 16:24:53 +0000 (17:24 +0100)]
Make it compile on RH8 native compiler of cluster
Anthony Geay [Wed, 28 Dec 2022 07:37:01 +0000 (08:37 +0100)]
[
EDF26665] : MEDFileFieldMultiTS.setInfo added in Python wrapping of MEDLoader
Anthony Geay [Wed, 21 Dec 2022 16:23:47 +0000 (17:23 +0100)]
Implementation of new DataArrayInt.locateComponentId method
Anthony Geay [Tue, 20 Dec 2022 15:13:16 +0000 (16:13 +0100)]
Implementation of MEDCoupling1SGTUMesh.computeTriangleHeight and DataArrayDouble.minPerTuple
abn [Thu, 15 Dec 2022 20:44:03 +0000 (21:44 +0100)]
Bug fix: MEDFileUMesh::Aggregate wrongly handling duplicated families
jfa [Fri, 16 Dec 2022 08:10:01 +0000 (11:10 +0300)]
Merge branch 'V9_10_BR'
Anthony Geay [Mon, 28 Nov 2022 16:34:34 +0000 (17:34 +0100)]
[
EDF26362] : Check at write time of MEDFileUMesh instance consitency between DataArrayDouble instances indirectly aggregated accross data structure
Anthony Geay [Mon, 28 Nov 2022 14:43:48 +0000 (15:43 +0100)]
Warning hunting
Anthony Geay [Mon, 28 Nov 2022 14:43:23 +0000 (15:43 +0100)]
[
EDF26451] : implementation of MEDFileMesh.addGroupsAtLevel
Anthony Geay [Mon, 28 Nov 2022 08:06:16 +0000 (09:06 +0100)]
[
EDF26299] : Quick fix for symmetrization of the behavior between families at nodes and cells
jfa [Tue, 22 Nov 2022 11:19:01 +0000 (14:19 +0300)]
Increment version: 9.10.0
abn [Fri, 21 Oct 2022 08:15:28 +0000 (10:15 +0200)]
Cygwin portability
Anthony Geay [Mon, 10 Oct 2022 10:49:01 +0000 (12:49 +0200)]
[tuleap30906] : fix compilation error in UB22
Anthony Geay [Fri, 7 Oct 2022 13:49:07 +0000 (15:49 +0200)]
Make it work with debian9 native g++ version 6.3.0
Anthony Geay [Fri, 7 Oct 2022 12:17:11 +0000 (14:17 +0200)]
[
EDF26238] : fix performance on MEDFileMesh::getGroupsOnSpecifiedLev method
Yoann Audouin [Mon, 26 Sep 2022 06:42:12 +0000 (08:42 +0200)]
Removing compiler warning (unused argument)
Anthony Geay [Wed, 14 Sep 2022 16:07:30 +0000 (18:07 +0200)]
Add MEDFileMesh.ConvertToMEDFileGeoType method
Anthony Geay [Mon, 12 Sep 2022 07:51:31 +0000 (09:51 +0200)]
[tuleap30958] : windows porting
Anthony Geay [Thu, 8 Sep 2022 06:24:40 +0000 (08:24 +0200)]
Management of derivatives of shape functions of NORM_HEXA8,NORM_PENTA6,NORM_PYRA5,NORM_PENTA15,NORM_HEXA20,NORM_HEXA27
Anthony Geay [Fri, 2 Sep 2022 09:49:27 +0000 (11:49 +0200)]
Keep track of datetime of configuration
Anthony Geay [Wed, 24 Aug 2022 13:37:09 +0000 (15:37 +0200)]
Fix problem for not locatable points in the context of NodeFE spatial discr
Anthony Geay [Thu, 18 Aug 2022 09:08:14 +0000 (11:08 +0200)]
Small refactoring of interpolation and implementation of localization of points regarding associated reference FE element.
abn [Wed, 8 Jun 2022 12:03:05 +0000 (14:03 +0200)]
Bug fix MEDCouplingRemapper::reverseTransfer()
abn [Fri, 20 May 2022 18:49:13 +0000 (20:49 +0200)]
Adding an extra test case for buildInnerBoundaryAlongM1Group()
abn [Thu, 2 Jun 2022 14:42:29 +0000 (16:42 +0200)]
Disabling usage of MEDCOUPLING_BUILD_PY_TESTS at application level.
+ updating CTestTestfileInstall.cmake files
vsr [Fri, 3 Jun 2022 09:52:08 +0000 (12:52 +0300)]
Fix problems with `salome test`
vsr [Tue, 31 May 2022 08:05:48 +0000 (11:05 +0300)]
Merge branch 'V9_9_BR'
abn [Thu, 12 May 2022 19:16:40 +0000 (21:16 +0200)]
[Bug fix]: buildInnerBoundaryAlongM1Group
+ some tetrahedral configurations not handled properly
+ rewrote algorithm for findCellsToRenumber()
vsr [Thu, 12 May 2022 10:43:01 +0000 (13:43 +0300)]
bos #29863 [CEA 29586] MEDCouplingBascisTest failing: SWIG 4 compatibility (temporary solution)
vsr [Thu, 5 May 2022 12:12:30 +0000 (15:12 +0300)]
Copyright update 2022
vsr [Thu, 5 May 2022 07:36:56 +0000 (10:36 +0300)]
Increment version: 9.9.0
abn [Fri, 29 Apr 2022 18:45:56 +0000 (20:45 +0200)]
Introducing MEDCOUPLING_BUILD_PY_TESTS (default ON) to allow disabling
Python tests.
abn [Thu, 28 Apr 2022 07:25:52 +0000 (09:25 +0200)]
Fixing CMake to allow inclusion as a sub-project.
Anthony Geay [Tue, 19 Apr 2022 09:30:28 +0000 (11:30 +0200)]
[
EDF25207] : More robust implementation keeping the same amount size of object for MeshElement objects
Anthony Geay [Mon, 11 Apr 2022 12:13:25 +0000 (14:13 +0200)]
[
EDF25207] : Fix bbox computation in the polhedron with more than 255 nodes context
[
EDF25207] : Non regression test
Anthony Geay [Wed, 30 Mar 2022 13:15:57 +0000 (15:15 +0200)]
Merge branch 'duc/new_function'
Anida Khizar [Mon, 28 Mar 2022 16:04:46 +0000 (18:04 +0200)]
Bug fix: infinite loop when ordering 1D cells of piecewise meshes made up of closed parts
DUC ANH HOANG [Tue, 29 Mar 2022 10:18:36 +0000 (12:18 +0200)]
new sort function for the pairs list which can replace sortEachPairToMakeALinkedList
Anida Khizar [Thu, 17 Feb 2022 21:23:54 +0000 (22:23 +0100)]
[Bug fix] : creation of redundant nodes in BuildSlice3D
abn [Fri, 4 Mar 2022 16:25:36 +0000 (17:25 +0100)]
[Bug fix] Intersect2DMeshWith1DLine now handles properly closed loops
abn [Thu, 3 Feb 2022 12:28:42 +0000 (13:28 +0100)]
Static members of CellModel and Units fix.
+ static items moved into dedicated methods with local static variables
+ avoid strange crashes in complex code couplings on some compilers.
eap [Mon, 17 Jan 2022 11:39:32 +0000 (14:39 +0300)]
bos #26461 [EDF] (2021) MedCoupling: debug tetra/tetra 3d intersector algorithm
Anthony Geay [Wed, 29 Dec 2021 14:44:51 +0000 (15:44 +0100)]
Fix error in deepCopy of MEDFileJoints for ASTERXX splitter
Anthony Geay [Wed, 29 Dec 2021 10:38:18 +0000 (11:38 +0100)]
Addition of MEDFileJointOneStep.clearCorrespondences method to update joints for ASTERXX splitter
Anthony Geay [Mon, 20 Dec 2021 07:40:48 +0000 (08:40 +0100)]
[
EDF24514] : GlobalNodeIds array was missing whereas a Global node array is present in MED file
vsr [Fri, 10 Dec 2021 09:38:08 +0000 (12:38 +0300)]
Merge branch 'V9_8_BR'
vsr [Fri, 26 Nov 2021 10:38:14 +0000 (13:38 +0300)]
Increment version: 9.8.0
eap [Mon, 8 Nov 2021 16:28:43 +0000 (19:28 +0300)]
bos #26452 [EDF] (2021) SMESH: orientation of faces
jfa [Wed, 17 Nov 2021 13:27:38 +0000 (16:27 +0300)]
[bos #26432] [CEA 26431] import/export SAUV removal