From: Bernard Secher Date: Thu, 3 Sep 2020 05:48:12 +0000 (+0200) Subject: update CDMATH X-Git-Tag: V9_6_0~57 X-Git-Url: http://git.salome-platform.org/gitweb/?a=commitdiff_plain;h=f346c9baa32aba798edc1d6571f4b8d1b12a4e54;p=tools%2Fsolverlab.git update CDMATH --- diff --git a/CDMATH/.gitignore b/CDMATH/.gitignore new file mode 100644 index 0000000..24bf7e7 --- /dev/null +++ b/CDMATH/.gitignore @@ -0,0 +1,27 @@ +# Compiled Object files +*.slo +*.lo +*.o +*.pyc + +# Compiled Dynamic libraries +*.so +*.dylib + +# Compiled Static libraries +*.lai +*.la +*.a + +# Temporary files +*~ + +# Automatically generated documentation files +doc/* +pre_requis/MEDFile/doc/* +*.map + +# Eclipse files +.cproject +.project +.settings/* diff --git a/CDMATH/CMakeLists.txt b/CDMATH/CMakeLists.txt old mode 100644 new mode 100755 index b330341..313a04a --- a/CDMATH/CMakeLists.txt +++ b/CDMATH/CMakeLists.txt @@ -16,15 +16,28 @@ option (CDMATH_WITH_PYTHON "Compile Python interface for CDMATH." OFF) option (CDMATH_WITH_POSTPRO "Install postprocessing Python modules." OFF) option (CDMATH_WITH_PACKAGE "Generate RPM, Debian and tarball packages." OFF) option (CDMATH_WITH_TESTS "Compile unit testing." OFF) + +#Path to installed libraries set (PETSC_DIR OFF CACHE STRING "PETSc library path" ) -set (HDF5_ROOT OFF CACHE STRING "HDF5 library path" )#For the compilation of MED with a specific version +set (SLEPC_DIR OFF CACHE STRING "SLEPc library path" ) +set (F2CBLASLAPACK_DIR OFF CACHE STRING "F2CBLASLAPACK library path" ) +set (HDF5_ROOT OFF CACHE STRING "HDF5 library path" )#For the compilation of MED with a specific version of HDF5 set (MEDFILE_ROOT_DIR OFF CACHE STRING "MED library path" ) set (MEDCOUPLING_ROOT_DIR OFF CACHE STRING "MEDCoupling library path" ) -set (DOWNLOAD_MED ${CDMATH_SOURCE_DIR}/pre_requis/med-4.0.0.tar.gz CACHE STRING "MED tarball path/url") -set (DOWNLOAD_MEDCOUPLING ${CDMATH_SOURCE_DIR}/pre_requis/medCoupling-9.4.0.tar.gz CACHE STRING "MEDCoupling tarball path/url" ) -set (DOWNLOAD_PETSC ${CDMATH_SOURCE_DIR}/pre_requis/PETSc/petsc-lite-3.13.1.tar.gz CACHE STRING "PETSc tarball path/url" ) -set (DOWNLOAD_HDF5 ${CDMATH_SOURCE_DIR}/pre_requis/PETSc/hdf5-1.10.3.tar.gz CACHE STRING "HDF5 tarball path/url" ) -set (DOWNLOAD_SLEPC ${CDMATH_SOURCE_DIR}/pre_requis/PETSc/slepc-3.13.1.tar.gz CACHE STRING "SLEPC tarball path/url" ) + +#url of tarball librairies +set (DOWNLOAD_PETSC http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.13.2.tar.gz + CACHE STRING "PETSc tarball path/url" ) +set (DOWNLOAD_SLEPC https://slepc.upv.es/download/distrib/slepc-3.13.2.tar.gz + CACHE STRING "SLEPC tarball path/url" ) +set (DOWNLOAD_F2CBLASLAPACK ${CDMATH_SOURCE_DIR}/pre_requis/PETSc/f2cblaslapack-3.4.2.q4.tar.gz + CACHE STRING "F2CBLASLAPACK tarball path/url" ) +set (DOWNLOAD_HDF5 ${CDMATH_SOURCE_DIR}/pre_requis/PETSc/hdf5-1.10.3.tar.gz + CACHE STRING "HDF5 tarball path/url" ) +set (DOWNLOAD_MED http://files.salome-platform.org/Salome/other/med-4.0.0.tar.gz + CACHE STRING "MED tarball path/url") +set (DOWNLOAD_MEDCOUPLING http://files.salome-platform.org/Salome/other/medCoupling-9.4.0.tar.gz + CACHE STRING "MEDCoupling tarball path/url" ) # Base directories @@ -33,97 +46,140 @@ set (MESH_DIR ${CDMATH_SOURCE_DIR}/mesh) set (LINEARSOLVER_DIR ${CDMATH_SOURCE_DIR}/linearsolver) set (CDMATH_SWIG_DIR ${CDMATH_SOURCE_DIR}/swig) set (CDMATH_POSTPRO_DIR ${CDMATH_SOURCE_DIR}/postprocessing) -set (PRE_REQUIS_DIR ${CDMATH_SOURCE_DIR}/pre_requis) set (TESTS_DIR ${CDMATH_SOURCE_DIR}/tests) list (APPEND CMAKE_MODULE_PATH "${CDMATH_SOURCE_DIR}/cmake_files") # PETSc and HDF5 -if (CDMATH_WITH_PETSC OR PETSC_DIR OR DOWNLOAD_PETSC OR DEFINED ENV{PETSC_DIR} ) - message ( STATUS "Checking variable PETSC_DIR : " $ENV{PETSC_DIR} ) +if (CDMATH_WITH_PETSC OR PETSC_DIR OR DEFINED ENV{PETSC_DIR} ) if ( DEFINED ENV{PETSC_DIR} OR PETSC_DIR) - if(NOT PETSC_DIR) + if (NOT PETSC_DIR) set(PETSC_DIR $ENV{PETSC_DIR}) + message ( STATUS "Checking variable PETSC_DIR : " $ENV{PETSC_DIR} ) + else (NOT PETSC_DIR) + message ( STATUS "Checking variable PETSC_DIR : " ${PETSC_DIR} ) endif(NOT PETSC_DIR) find_package (PETSc 3.4 REQUIRED) petsc_get_version () - string(REPLACE ";" ":" PETSC_INCLUDES_PATH "${PETSC_INCLUDES}")# use colon instead of semicolon in environment file env_CDMATH.sh - message ( STATUS "PETSC found. Version is ${PETSC_VERSION_MAJOR}.${PETSC_VERSION_MINOR}.${PETSC_VERSION_SUBMINOR}" ) + + message ( STATUS "PETSc found. Version is ${PETSC_VERSION_MAJOR}.${PETSC_VERSION_MINOR}.${PETSC_VERSION_SUBMINOR}" ) + set(PETSC_INSTALL ${PETSC_DIR}) #Define and search slepc variables - set(SLEPC_DIR ${PETSC_DIR}/${PETSC_ARCH}) + if ( NOT SLEPC_DIR ) + if ( DEFINED ENV{SLEPC_DIR} ) + set(SLEPC_DIR $ENV{SLEPC_DIR}) + else ( DEFINED ENV{SLEPC_DIR} ) + set(SLEPC_DIR ${PETSC_DIR}/${PETSC_ARCH}) + endif( DEFINED ENV{SLEPC_DIR} ) + endif( NOT SLEPC_DIR) + message ( STATUS "Checking variable SLEPC_DIR" ) if ( IS_DIRECTORY ${SLEPC_DIR}/include AND EXISTS ${SLEPC_DIR}/lib/libslepc.so) set(SLEPC_INCLUDES ${SLEPC_DIR}/include) set(SLEPC_LIBRARIES ${SLEPC_DIR}/lib/libslepc.so) - message( STATUS "SLEPC found at ${SLEPC_DIR}" ) + message( STATUS "SLEPc found at ${SLEPC_DIR}" ) else() - message( FATAL_ERROR "SLEPC not found at ${SLEPC_DIR}" ) + message( FATAL_ERROR "SLEPc not found at ${SLEPC_DIR}" ) endif() - #HDF5 to be found in petsc external packages - if( NOT HDF5_ROOT AND NOT DEFINED ENV{HDF5_ROOT} )#hdf5 is not defined in the environment - set(HDF5_ROOT $ENV{PETSC_DIR}/$ENV{PETSC_ARCH})# define hint for hdf5/med installation in petsc external packages - endif( NOT HDF5_ROOT AND NOT DEFINED ENV{HDF5_ROOT} ) - + #define hdf5 variables + if ( NOT HDF5_ROOT )#hdf5 is not defined in cmake arguments + if ( DEFINED ENV{HDF5_ROOT} )#hdf5 is defined in the environment + set(HDF5_ROOT $ENV{HDF5_ROOT}) + else( DEFINED ENV{HDF5_ROOT} )#hdf5 is not defined in the environment + #HDF5 to be found in petsc external packages + set(HDF5_ROOT ${PETSC_DIR}/${PETSC_ARCH})# define hint for hdf5/med installation in petsc external packages + endif( DEFINED ENV{HDF5_ROOT} ) + endif( NOT HDF5_ROOT ) + set(HDF5_LIBRARY_DIR ${HDF5_ROOT}/lib) + set(HDF5_INCLUDE_DIRS ${HDF5_ROOT}/include) else ( DEFINED ENV{PETSC_DIR} OR PETSC_DIR ) - message ( STATUS "PETSC_DIR not set, searching petsc in the system" ) + message ( STATUS "PETSC_DIR not set, searching PETSc and SLEPc in the system" ) - if ( IS_DIRECTORY "/usr/include/petsc/" AND EXISTS "/usr/lib64/libpetsc.so" AND IS_DIRECTORY "/usr/include/slepc/" AND EXISTS "/usr/lib64/libslepc.so" ) #Case fedora/redhat system install + if ( IS_DIRECTORY "/usr/include/petsc/" AND EXISTS "/usr/lib64/libpetsc.so" ) #Case fedora/redhat system install message ( STATUS "PETSC includes found in /usr/include/petsc/" ) message ( STATUS "PETSC library found in /usr/lib64" ) set(PETSC_DIR /usr/) set(PETSC_INCLUDES /usr/include/petsc /usr/include/petsc/petsc/mpiuni) set(PETSC_LIBRARIES /usr/lib64/libpetsc.so) - #set(PETSC_VERSION "3.8") #3.8 for fedora 26 , 3.9 for fedora 29 , 3.10 for fedora 30, , 3.12 for fedora 32 - petsc_get_version () - set (CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, petsc-devel (>= 3.4)") # This is not fully working yet. - - message( STATUS "SLEPC includes found in /usr/include/slepc/" ) - message( STATUS "SLEPC library found in /usr/lib64/slepc/" ) - set(SLEPC_DIR /usr/) - set(SLEPC_INCLUDES ${SLEPC_DIR}/include) - set(SLEPC_LIBRARIES ${SLEPC_DIR}/lib/libslepc.so) + set(PETSC_VERSION "3.8") #3.8 for fedora 26 , 3.9 for fedora 29 , 3.10 for fedora 30, , 3.12 for fedora 32 + + set(CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, petsc-devel (>= 3.4)") # This is not fully working yet. + set(PETSC_INSTALL ${PETSC_DIR}) + + #Define and search slepc variables + if ( IS_DIRECTORY "/usr/include/slepc/" AND EXISTS "/usr/lib64/libslepc.so" ) + message( STATUS "SLEPc includes found in /usr/include/slepc/" ) + message( STATUS "SLEPc library found in /usr/lib64/slepc/" ) + set(SLEPC_DIR /usr/) + set(SLEPC_INCLUDES ${SLEPC_DIR}/include) + set(SLEPC_LIBRARIES ${SLEPC_DIR}/lib/libslepc.so) + set (CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, slepc-devel (>= 3.4)") # This is not fully working yet. + else ( IS_DIRECTORY "/usr/include/slepc/" AND EXISTS "/usr/lib64/libslepc.so" ) + message( FATAL_ERROR "SLEPc not found in the system" ) + endif( IS_DIRECTORY "/usr/include/slepc/" AND EXISTS "/usr/lib64/libslepc.so" ) #HDF5 to be found in the system - set (CPACK_DEBIAN_PACKAGE_DEPENDS "libhdf5-dev") - set (CPACK_RPM_PACKAGE_REQUIRES "hdf5-devel") + if ( NOT HDF5_ROOT AND NOT DEFINED ENV{HDF5_ROOT} )#hdf5 is not defined in the environment + find_package(HDF5 REQUIRED) + set(CPACK_DEBIAN_PACKAGE_DEPENDS "libhdf5-dev") + set(CPACK_RPM_PACKAGE_REQUIRES "hdf5-devel") + endif( NOT HDF5_ROOT AND NOT DEFINED ENV{HDF5_ROOT} ) + - #elseif ( IS_DIRECTORY "/usr/lib/petsc/" AND EXISTS "/usr/lib/petsc/lib/libpetsc_real.so" AND IS_DIRECTORY "/usr/lib/slepc/" AND EXISTS "/usr/lib/slepc/lib/libslepc_real.so") #Case ubuntu/debian system install - # message ( STATUS "PETSC found in /usr/lib/petsc/ and exists /usr/lib/petsc/lib/libpetsc_real.so") + #elseif ( IS_DIRECTORY "/usr/lib/petsc/include" AND EXISTS "/usr/lib/petsc/lib/libpetsc_real.so" ) #Case ubuntu/debian system install + # message ( STATUS "PETSc includes found in /usr/lib/petsc/include") + # message ( STATUS "PETSc library found in /usr/lib/petsc/lib/libpetsc_real.so") # set(PETSC_DIR /usr/lib/petsc/) # set(PETSC_INCLUDES ${PETSC_DIR}/include ${PETSC_DIR}/include/petsc/mpiuni) - # set(PETSC_LIBRARIES ${PETSC_DIR}/libpetsc_real.so) + # set(PETSC_LIBRARIES ${PETSC_DIR}/lib/libpetsc_real.so) # find_package (PETSc 3.4 REQUIRED) # petsc_get_version () # set (CPACK_DEBIAN_PACKAGE_DEPENDS "${CPACK_DEBIAN_PACKAGE_DEPENDS}, petsc-dev (>= 3.4)") # This is not fully working yet. - # message ( STATUS "SLEPC found in /usr/lib/slepc/ and exists /usr/lib/slepc/lib/libslepc_real.so") - # set(SLEPC_DIR /usr/lib/slepc/) - # set(SLEPC_INCLUDES ${SLEPC_DIR}/include ) - # set(SLEPC_LIBRARIES ${SLEPC_DIR}/libslepc_real.so) + # Define and search slepc variables + # if ( IS_DIRECTORY "/usr/lib/slepc/include" AND EXISTS "/usr/lib/slepc/lib/libslepc_real.so" ) + # message( STATUS "SLEPc includes found in /usr/lib/slepc/include" ) + # message( STATUS "SLEPc library found in /usr/lib/slepc/lib/libslepc_real.so" ) + # set(SLEPC_DIR /usr/lib/slepc/) + # set(SLEPC_INCLUDES ${SLEPC_DIR}/include) + # set(SLEPC_LIBRARIES ${SLEPC_DIR}/lib/libslepc_real.so) + # set (CPACK_DEBIAN_PACKAGE_REQUIRES "${CPACK_DEBIAN_PACKAGE_REQUIRES}, slepc-devel (>= 3.4)") # This is not fully working yet. + # else ( IS_DIRECTORY "/usr/lib/slepc/include" AND EXISTS "/usr/lib/slepc/lib/libslepc_real.so" ) + # message( FATAL_ERROR "SLEPc not found in the system" ) + # endif( IS_DIRECTORY "/usr/lib/slepc/include" AND EXISTS "/usr/lib/slepc/lib/libslepc_real.so" ) #elseif ( IS_DIRECTORY "/usr/local/lib/python2.7/dist-packages/petsc") #Case ubuntu/debian system pip install - else ( IS_DIRECTORY "/usr/include/petsc/" AND EXISTS "/usr/lib64/libpetsc.so" AND IS_DIRECTORY "/usr/include/slepc/" AND EXISTS "/usr/lib64/libslepc.so" ) # No petsc in system, do compile petsc along with slepc as an external package - message (STATUS "PETSC not found in the system, PETSC (with SLEPC and HDF5) will be downloaded and compiled" ) - set(PETSC_SRC ${CDMATH_SOURCE_DIR}/pre_requis/PETSc) - set(PETSC_DIR ${CMAKE_INSTALL_PREFIX}/share/petsc_install) # Location of the final install - set(PETSC_INCLUDES ${PETSC_DIR}/include/ ${PETSC_DIR}/include/petsc/mpiuni) - set(PETSC_LIBRARIES ${PETSC_DIR}/lib/libpetsc.so) + else ( IS_DIRECTORY "/usr/include/petsc/" AND EXISTS "/usr/lib64/libpetsc.so" ) # No petsc in system, do compile petsc along with slepc as an external package + message (STATUS "PETSC not found in the system") + message (STATUS "PETSC will be downloaded and compiled from ${DOWNLOAD_PETSC}" ) + message (STATUS "SLEPC will be downloaded and compiled from ${DOWNLOAD_SLEPC}" ) + message (STATUS "HDF5 will be downloaded and compiled from ${DOWNLOAD_HDF5}" ) + + #extract tarball name + string(LENGTH "${DOWNLOAD_PETSC}" tarball_url_length)#length of the tarball + string(FIND "${DOWNLOAD_PETSC}" "/" start_tarball_name REVERSE )# last occurence of "/" + MATH(EXPR start_tarball_name "${start_tarball_name}+1")#start after the occurence of "/" + MATH(EXPR tarball_name_length "${tarball_url_length}-${start_tarball_name}-7")#name ends before .tar.gz that counts for 7 characters + string(SUBSTRING ${DOWNLOAD_PETSC} ${start_tarball_name} ${tarball_name_length} PETSC_TARBALL_NAME) + + set(PETSC_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/${PETSC_TARBALL_NAME}) # Location of the final install + set(PETSC_INSTALL ${CMAKE_INSTALL_PREFIX}/share/petsc)#folder to copy petsc libraries and include files ExternalProject_Add (PETSc URL ${DOWNLOAD_PETSC} - SOURCE_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/PETSc + SOURCE_DIR ${PETSC_DIR} BUILD_IN_SOURCE TRUE - CONFIGURE_COMMAND /configure --prefix=${PETSC_DIR} --with-debugging=0 --with-mpi=0 --download-f2cblaslapack=${PETSC_SRC}/f2cblaslapack-3.4.2.q4.tar.gz --with-fc=0 --download-slepc=${DOWNLOAD_SLEPC} --download-hdf5=${DOWNLOAD_HDF5} - BUILD_COMMAND make all + CONFIGURE_COMMAND /configure --prefix=${PETSC_INSTALL} --with-debugging=0 --with-mpi=0 --download-f2cblaslapack=${DOWNLOAD_F2CBLASLAPACK} --with-fc=0 --download-slepc=${DOWNLOAD_SLEPC} --download-hdf5=${DOWNLOAD_HDF5} + BUILD_COMMAND make TEST_COMMAND make check - INSTALL_COMMAND make install + INSTALL_COMMAND make all INSTALL_DIR ${PETSC_DIR} STAMP_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis LOG_DOWNLOAD TRUE # Wrap download in script to log output @@ -134,33 +190,35 @@ if (CDMATH_WITH_PETSC OR PETSC_DIR OR DOWNLOAD_PETSC OR DEFINED ENV{PETSC_DIR} ) LOG_INSTALL TRUE # Wrap install in script to log output ) - petsc_get_version () - string(REPLACE ";" ":" PETSC_INCLUDES_PATH "${PETSC_INCLUDES}")# use colon instead of semicolon in environment file env_CDMATH.sh - message ( STATUS "PETSC found. Version is ${PETSC_VERSION_MAJOR}.${PETSC_VERSION_MINOR}.${PETSC_VERSION_SUBMINOR}" ) + #file (STRINGS "${PETSC_DIR}/${PETSC_ARCH}/include/petscversion.h" vstrings REGEX "#define PETSC_VERSION_(RELEASE|MAJOR|MINOR|SUBMINOR|PATCH) ") + #message( STATUS "PETSc version is ${PETSC_VERSION_MAJOR}.${PETSC_VERSION_MINOR}.${PETSC_VERSION_SUBMINOR}" ) + message( STATUS "PETSc, SLEPc and HDF5 will be installed at ${PETSC_INSTALL}") + string(SUBSTRING ${PETSC_TARBALL_NAME} 6 ${tarball_name_length} PETSC_VERSION) #define slepc variables - set(SLEPC_DIR ${PETSC_DIR}/${PETSC_ARCH}) + set(SLEPC_DIR ${PETSC_INSTALL}) set(SLEPC_INCLUDES ${SLEPC_DIR}/include) set(SLEPC_LIBRARIES ${SLEPC_DIR}/lib/libslepc.so) - #HDF5 to be found in petsc external packages - if ( NOT HDF5_ROOT AND NOT DEFINED ENV{HDF5_ROOT} )#hdf5 is not defined in the environment - set(HDF5_ROOT $ENV{PETSC_DIR}/$ENV{PETSC_ARCH})# define hint for hdf5/med installation in petsc external packages - endif( NOT HDF5_ROOT AND NOT DEFINED ENV{HDF5_ROOT} ) - - endif ( IS_DIRECTORY "/usr/include/petsc/" AND EXISTS "/usr/lib64/libpetsc.so" AND IS_DIRECTORY "/usr/include/slepc/" AND EXISTS "/usr/lib64/libslepc.so" ) + #define hdf5 variables + if ( NOT HDF5_ROOT )#hdf5 is not defined in cmake arguments + if ( DEFINED ENV{HDF5_ROOT} )#hdf5 is defined in the environment + set(HDF5_ROOT $ENV{HDF5_ROOT}) + else( DEFINED ENV{HDF5_ROOT} )#hdf5 is not defined in the environment + set(HDF5_ROOT ${PETSC_INSTALL})#HDF5 to be found in petsc installation + endif( DEFINED ENV{HDF5_ROOT} ) + endif( NOT HDF5_ROOT ) + set(HDF5_LIBRARY_DIR ${HDF5_ROOT}/lib) + set(HDF5_INCLUDE_DIRS ${HDF5_ROOT}/include) + + endif ( IS_DIRECTORY "/usr/include/petsc/" AND EXISTS "/usr/lib64/libpetsc.so" ) endif ( DEFINED ENV{PETSC_DIR} OR PETSC_DIR ) if ( ${PETSC_VERSION} VERSION_GREATER 3.5 ) add_definitions(-DPETSC_VERSION_GREATER_3_5) endif( ${PETSC_VERSION} VERSION_GREATER 3.5 ) - -endif( CDMATH_WITH_PETSC OR PETSC_DIR OR DOWNLOAD_PETSC OR DEFINED ENV{PETSC_DIR} ) - -#HDF5 -if ( NOT HDF5_ROOT AND DEFINED ENV{HDF5_ROOT} )#hdf5 is defined in the environment - set(HDF5_ROOT $ENV{HDF5_ROOT}) -endif( NOT HDF5_ROOT AND DEFINED ENV{HDF5_ROOT} ) +string(REPLACE ";" ":" PETSC_INCLUDES_INSTALL "${PETSC_INCLUDES}")# use colon instead of semicolon in environment file env_CDMATH.sh +endif( CDMATH_WITH_PETSC OR PETSC_DIR OR DEFINED ENV{PETSC_DIR} ) #MED if( MEDFILE_ROOT_DIR OR DEFINED ENV{MEDFILE_ROOT_DIR}) @@ -169,20 +227,17 @@ if( MEDFILE_ROOT_DIR OR DEFINED ENV{MEDFILE_ROOT_DIR}) set(MEDFILE_ROOT_DIR $ENV{MEDFILE_ROOT_DIR} ) endif( NOT MEDFILE_ROOT_DIR ) - message (STATUS "Seeking MEDFile library in ${MEDFILE_ROOT_DIR}") find_package (MEDFile REQUIRED) + message (STATUS "MEDFile found in ${MEDFILE_ROOT_DIR}") else( MEDFILE_ROOT_DIR OR DEFINED ENV{MEDFILE_ROOT_DIR}) - find_package (HDF5 REQUIRED) - add_library(hdf5 SHARED IMPORTED) - set_property(TARGET hdf5 PROPERTY IMPORTED_LOCATION ${HDF5_ROOT}/lib/libhdf5.so) - - string(FIND "${HDF5_LIBRARIES}" "libhdf5.so" pos) - string(SUBSTRING "${HDF5_LIBRARIES}" 0 ${pos} HDF5_LIBRARY_DIR) + #string(FIND "${HDF5_LIBRARIES}" "libhdf5.so" pos) + #string(SUBSTRING "${HDF5_LIBRARIES}" 0 ${pos} HDF5_LIBRARY_DIR) + message(STATUS "MED will be downloaded and installed from ${DOWNLOAD_MED}") set(MACHINE PCLINUX) set(MEDFILE_DEFINITIONS "-D${MACHINE} -DMEDFILE_INSTALL_DOC=OFF")#Comment ne pas compiler la doc ? - set(MEDFILE_ROOT_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/med_install) # Location of the final install + set(MEDFILE_ROOT_DIR ${CMAKE_INSTALL_PREFIX}/share/med) # Location of the final install #extraction of the tarball archive name string(LENGTH "${DOWNLOAD_MED}" tarball_url_length)#length of the name of the tarball @@ -191,14 +246,11 @@ else( MEDFILE_ROOT_DIR OR DEFINED ENV{MEDFILE_ROOT_DIR}) MATH(EXPR tarball_name_length "${tarball_url_length}-${start_tarball_name}-7")#name ends before .tar.gz that counts for 7 characters string(SUBSTRING ${DOWNLOAD_MED} ${start_tarball_name} ${tarball_name_length} MED_TARBALL_NAME) - message(STATUS "MED tarball name is ${MED_TARBALL_NAME}") - ExternalProject_Add (MED URL ${DOWNLOAD_MED} #location of med tarball SOURCE_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/${MED_TARBALL_NAME} BUILD_IN_SOURCE TRUE CONFIGURE_COMMAND /configure --prefix=${MEDFILE_ROOT_DIR} --with-hdf5=${HDF5_ROOT} --with-hdf5-include=${HDF5_ROOT}/include --with-hdf5-lib=${HDF5_LIBRARY_DIR} --with-hdf5-bin=${HDF5_ROOT}/bin --with-swig=yes - DEPENDS hdf5 BUILD_COMMAND make INSTALL_COMMAND make install INSTALL_DIR ${MEDFILE_ROOT_DIR} @@ -213,11 +265,8 @@ else( MEDFILE_ROOT_DIR OR DEFINED ENV{MEDFILE_ROOT_DIR}) set(MEDFILE_INCLUDE_DIRS ${MEDFILE_ROOT_DIR}/include)# Nécessaire pour le medloader et les sous-dossiers mesh, et IJKMesh set(MEDFILE_C_LIBRARIES med medC)# Nécessaire pour le medloader -endif( MEDFILE_ROOT_DIR OR DEFINED ENV{MEDFILE_ROOT_DIR}) -#For the environment file -set(MEDFILE_C_LIBRARIES_PATH ${MEDFILE_ROOT_DIR}/lib/libmed.so ${MEDFILE_ROOT_DIR}/lib/libmedC.so) -string(REPLACE ";" ":" MEDFILE_C_LIBRARIES_PATH "${MEDFILE_C_LIBRARIES_PATH}")# use colon instead of semicolon in environment file env_CDMATH.sh +endif( MEDFILE_ROOT_DIR OR DEFINED ENV{MEDFILE_ROOT_DIR}) add_library(med SHARED IMPORTED) set_property(TARGET med PROPERTY IMPORTED_LOCATION ${MEDFILE_ROOT_DIR}/lib/libmed.so) @@ -240,28 +289,25 @@ if( MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR}) endif( NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so OR NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/lib/libmedcoupling.so OR NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/include/MEDCoupling.hxx) else( MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR}) - - set(MEDCOUPLING_ROOT_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/medCoupling_install) # Location of the final install + message(STATUS "MEDCoupling will be downloaded and installed from ${DOWNLOAD_MEDCOUPLING}") + set(MEDCOUPLING_ROOT_DIR ${CMAKE_INSTALL_PREFIX}/share/medcoupling) # Location of the final install + SET(ENV{HDF5_ROOT} ${HDF5_ROOT})#MEDCoupling install process seems to require an environment variable #extraction of the tarball archive name - string(LENGTH ${DOWNLOAD_MEDCOUPLING} tarball_url_length)#length of the tarball - string(FIND ${DOWNLOAD_MEDCOUPLING} "/" start_tarball_name REVERSE )# last occurence of "/" + string(LENGTH "${DOWNLOAD_MEDCOUPLING}" tarball_url_length)#length of the tarball + string(FIND "${DOWNLOAD_MEDCOUPLING}" "/" start_tarball_name REVERSE )# last occurence of "/" MATH(EXPR start_tarball_name "${start_tarball_name}+1")#start after the occurence of "/" MATH(EXPR tarball_name_length "${tarball_url_length}-${start_tarball_name}-7")#name ends before .tar.gz that counts for 7 characters string(SUBSTRING ${DOWNLOAD_MEDCOUPLING} ${start_tarball_name} ${tarball_name_length} MEDCOUPLING_TARBALL_NAME) string(SUBSTRING ${MEDCOUPLING_TARBALL_NAME} 12 ${tarball_name_length} MEDCOUPLING_VERSION_NAME) - message(STATUS "MEDCOUPLING tarball name is ${MEDCOUPLING_TARBALL_NAME}") - message(STATUS "MEDCOUPLING version is ${MEDCOUPLING_VERSION_NAME}") - - SET(ENV{HDF5_ROOT} ${HDF5_ROOT})#MEDCoupling install process seems to require an environment variable + message(STATUS "MEDCoupling version is ${MEDCOUPLING_VERSION_NAME}") ExternalProject_Add (MEDCoupling URL ${DOWNLOAD_MEDCOUPLING} #location of medcoupling tarball SOURCE_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/${MEDCOUPLING_TARBALL_NAME} # BUILD_IN_SOURCE FALSE CONFIGURE_COMMAND cmake /${MEDCOUPLING_TARBALL_NAME} -DCMAKE_INSTALL_PREFIX=${MEDCOUPLING_ROOT_DIR} -DCONFIGURATION_ROOT_DIR=/configuration-${MEDCOUPLING_VERSION_NAME} -DMEDFILE_ROOT_DIR=${MEDFILE_ROOT_DIR} -DMEDCOUPLING_ENABLE_PARTITIONER=OFF -DMEDCOUPLING_PARTITIONER_METIS=OFF -DMEDCOUPLING_PARTITIONER_SCOTCH=OFF -DMEDCOUPLING_ENABLE_RENUMBER=OFF -DMEDCOUPLING_BUILD_DOC=OFF -DHDF5_ROOT_DIR=${HDF5_ROOT} - DEPENDS med BUILD_COMMAND make INSTALL_COMMAND make install INSTALL_DIR ${MEDCOUPLING_ROOT_DIR} @@ -273,81 +319,126 @@ else( MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR}) LOG_TEST TRUE # Wrap test in script to log output LOG_INSTALL TRUE # Wrap install in script to log output ) -endif( MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR} ) -set(MEDCOUPLING_INCLUDE_DIR ${MEDCOUPLING_ROOT_DIR}/include) +endif( MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR} ) -#For the environment file -set(MEDCOUPLING_LIBRARIES_PATH ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so ${MEDCOUPLING_ROOT_DIR}/lib/libmedcoupling.so) -string(REPLACE ";" ":" MEDCOUPLING_LIBRARIES_PATH "${MEDCOUPLING_LIBRARIES_PATH}")# use colon instead of semicolon in environment file env_CDMATH.sh +set(MEDCOUPLING_INCLUDE_DIR ${MEDCOUPLING_ROOT_DIR}/include) +set(MEDCOUPLING_LIBRARIES ${MEDCOUPLING_ROOT_DIR}/lib )#for environment file env_CDMATH.sh add_library(medloader SHARED IMPORTED ) set_property(TARGET medloader PROPERTY IMPORTED_LOCATION ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so) add_library(medcoupling SHARED IMPORTED ) set_property(TARGET medcoupling PROPERTY IMPORTED_LOCATION ${MEDCOUPLING_ROOT_DIR}/lib/libmedcoupling.so) -if(DEFINED MED AND DEFINED PETSc) +if (TARGET MED AND TARGET PETSc) ExternalProject_Add_StepDependencies( MED build PETSc )#PETSc doit être compilé avant MED car c'est PETSc qui compile HDF5 -endif(DEFINED MED AND DEFINED PETSc) +endif(TARGET MED AND TARGET PETSc) -if(DEFINED MED AND DEFINED MEDCoupling) +if (TARGET MED AND TARGET MEDCoupling) ExternalProject_Add_StepDependencies( MEDCoupling build MED )#MED doit être compilé avant MEDCoupling -endif(DEFINED MED AND DEFINED MEDCoupling) +endif(TARGET MED AND TARGET MEDCoupling) + +if (TARGET PETSc AND TARGET MEDCoupling) + ExternalProject_Add_StepDependencies( MEDCoupling build PETSc )#PETSc doit être compilé avant MEDCoupling (car il contient hdf5) +endif(TARGET PETSc AND TARGET MEDCoupling) # Paraview variables for env_CDMATH.sh -if (CDMATH_WITH_PYTHON AND CDMATH_WITH_POSTPRO) - set (PV_LIB_DIR /usr/lib/python2.7/dist-packages/:/usr/lib64/paraview/) - set (PV_PYTHON_DIR /usr/lib/python2.7/dist-packages:/usr/lib64/paraview/site-packages/:/usr/lib64/paraview/site-packages/paraview/:/usr/lib64/paraview/site-packages/vtk/:/usr/lib64/paraview/python2.7/site-packages/:/usr/lib64/paraview/python2.7/site-packages/paraview/:/usr/lib64/paraview/python2.7/site-packages/vtkmodules:/usr/lib64/paraview/python3.7/site-packages/:/usr/lib64/paraview/python3.7/site-packages/paraview/:/usr/lib64/paraview/python3.7/site-packages/vtkmodules) -endif () +if (CDMATH_WITH_PYTHON AND CDMATH_WITH_POSTPRO) +#find_package(VTK) +#find_package(ParaView) + + #extraction of the paraview version" + IF ( EXISTS "/usr/include/paraview/vtkPVConfig.h" ) + file(STRINGS /usr/include/paraview/vtkPVConfig.h vtkConfig) + ELSE ( EXISTS "/usr/include/paraview/vtkPVConfig.h" ) + message(WARNING "Could not find ParaView configuration file vtkPVConfig.h. Postprocessing won't work") + ENDIF( EXISTS "/usr/include/paraview/vtkPVConfig.h" ) + + FOREACH(line ${vtkConfig}) + string(FIND "${line}" "#define PARAVIEW_VERSION_FULL " pos) + IF(NOT ${pos} EQUAL -1) + string(LENGTH ${line} line_length)#length of the tarball + MATH(EXPR start_pv_version "${line_length}-6")#line ends with "x.y.z", that counts for 7 characters + string(SUBSTRING ${line} ${start_pv_version} 5 PV_VERSION) + break() + ENDIF(NOT ${pos} EQUAL -1) + ENDFOREACH(line vtkConfig) + + message(STATUS "ParaView version is ${PV_VERSION}" ) + IF ( ${PV_VERSION} VERSION_GREATER 5.6.0 OR ${PV_VERSION} VERSION_EQUAL 5.6.0 )#Use python 3, use VERSION_GREATER_EQUAL if cmake >=3.7 + SET(PYTHON2OR3 "3") + ELSE ( ${PV_VERSION} VERSION_GREATER 5.6.0 OR ${PV_VERSION} VERSION_EQUAL 5.6.0 )#Use python 2 + SET(PYTHON2OR3 "2") + ENDIF( ${PV_VERSION} VERSION_GREATER 5.6.0 OR ${PV_VERSION} VERSION_EQUAL 5.6.0 ) + + set (PV_LIB_DIR /usr/lib/python${PYTHON2OR3}.7/dist-packages/paraview/:/usr/lib64/paraview/:/usr/lib/paraview/) + set (PV_PYTHON_DIR /usr/lib/python${PYTHON2OR3}.7/dist-packages/paraview/:/usr/lib64/paraview/site-packages/:/usr/lib64/paraview/site-packages/paraview/:/usr/lib64/paraview/site-packages/vtk/:/usr/lib64/paraview/python${PYTHON2OR3}.7/site-packages/:/usr/lib64/paraview/python${PYTHON2OR3}.7/site-packages/paraview/:/usr/lib64/paraview/python${PYTHON2OR3}.7/site-packages/vtkmodules:/usr/lib/paraview/site-packages/paraview:/usr/lib/paraview/site-packages/paraview/vtk) + +endif(CDMATH_WITH_PYTHON AND CDMATH_WITH_POSTPRO) # Swig interface -if (CDMATH_WITH_PYTHON) - find_package (PYTHON REQUIRED) - find_package (SWIG 3.0 REQUIRED) - set (CPACK_DEBIAN_PACKAGE_DEPENDS "${CPACK_DEBIAN_PACKAGE_DEPENDS}, python-dev, python-numpy, swig") - set (CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, python-devel, numpy, swig") - add_subdirectory (${CDMATH_SWIG_DIR}) -endif () +if (CDMATH_WITH_PYTHON) + IF (${CMAKE_VERSION} VERSION_GREATER "3.12.0") + find_package(Python ${PYTHON2OR3} REQUIRED COMPONENTS Interpreter Development ) + SET(PYTHON_EXECUTABLE ${Python_EXECUTABLE}) + ELSE (${CMAKE_VERSION} VERSION_GREATER "3.12.0") + find_package(PythonInterp ${PYTHON2OR3} REQUIRED ) + find_package(PythonLibs ${PYTHON2OR3} REQUIRED ) + set(Python_LIBRARIES ${PYTHON_LIBRARIES}) + set(Python_INCLUDE_DIRS ${PYTHON_INCLUDE_DIRS}) + set(Python_VERSION ${PYTHON_VERSION_STRING}) + ENDIF(${CMAKE_VERSION} VERSION_GREATER "3.12.0") + + message(STATUS "Python version is ${Python_VERSION}") + + find_package (SWIG 3.0 REQUIRED) + set (CPACK_DEBIAN_PACKAGE_DEPENDS "${CPACK_DEBIAN_PACKAGE_DEPENDS}, python-dev, python-numpy, swig") + set (CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, python-devel, numpy, swig") + add_subdirectory (${CDMATH_SWIG_DIR}) +endif(CDMATH_WITH_PYTHON) find_package (XDR REQUIRED) add_subdirectory (${BASE_DIR}) add_subdirectory (${MESH_DIR}) -if (CDMATH_WITH_PETSC) +if (CDMATH_WITH_PETSC) add_subdirectory (${LINEARSOLVER_DIR}) -endif () +endif(CDMATH_WITH_PETSC) # Documentation if (CDMATH_WITH_DOCUMENTATION) find_package (Doxygen) set (CPACK_DEBIAN_PACKAGE_DEPENDS "${CPACK_DEBIAN_PACKAGE_DEPENDS}, doxygen, graphviz, mscgen") set (CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, doxygen, graphviz, mscgen") - if (NOT DOXYGEN_FOUND) + if (NOT DOXYGEN_FOUND) message (FATAL_ERROR "Doxygen is needed to build the documentation. Please install it correctly.") - endif (NOT DOXYGEN_FOUND) + endif(NOT DOXYGEN_FOUND) configure_file (Doxyfile.in ${PROJECT_BINARY_DIR}/Doxyfile @ONLY IMMEDIATE) add_custom_target (doc COMMAND ${DOXYGEN_EXECUTABLE} ${PROJECT_BINARY_DIR}/Doxyfile SOURCES ${PROJECT_BINARY_DIR}/Doxyfile) - if ( IS_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/doc/html) - install (DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/doc/html DESTINATION share/doc/cdmath) - endif() -endif () + if ( IS_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/doc/html) + install(DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/doc/html DESTINATION doc/cdmath-dev-doc) + endif( IS_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/doc/html) +endif(CDMATH_WITH_DOCUMENTATION) + +#Debug option : todo = sort flags +set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -pg -fprofile-arcs -ftest-coverage -lgcov") +if (${CMAKE_BUILD_TYPE} STREQUAL "Debug") + SET(CMAKE_EXE_LINKER_FLAGS "-pg -fprofile-arcs -ftest-coverage -lgcov") + SET(CMAKE_CXX_FLAGS "-fprofile-arcs -ftest-coverage") +endif(${CMAKE_BUILD_TYPE} STREQUAL "Debug") # Tests -if (CDMATH_WITH_TESTS) - set (CMAKE_EXE_LINKER_FLAGS "-pg -fprofile-arcs -ftest-coverage -lgcov") - enable_testing () +if (CDMATH_WITH_TESTS) find_package (CPPUNIT REQUIRED) -endif () -if (CDMATH_WITH_TESTS AND CDMATH_WITH_PYTHON) enable_testing () add_subdirectory (${TESTS_DIR})#contains c++ and python tests -endif() +endif(CDMATH_WITH_TESTS) # Packaging if (CDMATH_WITH_PACKAGE) include (CPackLists.txt) -endif () +endif(CDMATH_WITH_PACKAGE) # Postprocessing if (CDMATH_WITH_PYTHON AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/README.md b/CDMATH/README.md index 5a696a7..9b2ca6b 100755 --- a/CDMATH/README.md +++ b/CDMATH/README.md @@ -30,21 +30,19 @@ Create your source directory. For instance: * `cd ~/workspace/cdmath` Download from GitHub -* click on the following link : `https://github.com/ndjinga/CDMATH/archive/master.zip` then unzip the file in a directory cdmath-master -* or type the following in a terminal : `wget https://github.com/ndjinga/CDMATH/archive/master.zip` then unzip the file in a directory cdmath-master +* click on the following link : `https://github.com/ndjinga/CDMATH/archive/master.zip`, then unzip the file in a directory cdmath-master +* or type the following in a terminal : `wget https://github.com/ndjinga/CDMATH/archive/master.zip`, then unzip the file in a directory cdmath-master * or clone the git repository to a folder cdmath-master: `git clone https://github.com/ndjinga/CDMATH.git cdmath-master` Set environment for the compilation of CDMATH --------------------------------------------- -Dependencies. The following packages list is sufficient on Ubuntu 14.04, Ubuntu 16.04, Ubuntu 18.04 : +Dependencies. The following package list is sufficient on Ubuntu 14.04, Ubuntu 16.04, Ubuntu 18.04 : - `cmake3` (mandatory) - `g++` or another C++ compiler (mandatory) - - `libhdf5-dev` (mandatory) - `python-dev`, `python-numpy` and `swig`, if you want to use CDMATH commands in Python scripts. Use the compilation option `-DCDMATH_WITH_PYTHON=ON`. (highly recommended) - `python-matplotlib` and `paraview` for postprocessing tools such as plotting curves (matplotlib) or generating 3D view images (paraview). Use the compilation option `-DCDMATH_WITH_POSTPRO=ON` (recommended). - - `petsc` if you want to solve large spase linear systems. Typically required for implicit methods. Use the compilation option `-DCDMATH_WITH_PETSC=ON` (recommended). - `jupyter`, in order to generate and visualise nice reports from test case simulations (optional) - `doxygen`, `graphviz` and `mscgen`, if you want to generate a nice source code documentation in `~/workspace/cdmath/cdmath_install/doc/`. Use the compilation option `-DCDMATH_WITH_DOCUMENTATION=ON` (optional). - `libcppunit-dev`, if you want to generate unit tests. Use the compilation option `-DCDMATH_WITH_TESTS=ON` (optional). @@ -59,27 +57,35 @@ Directories. Create the suggested build and installation folders: Compile and install CDMATH -------------------------- -Generate makefiles for a minimum version: -* `cmake ../cdmath-master/ -DCMAKE_INSTALL_PREFIX=../cdmath_install -DCMAKE_BUILD_TYPE=Release` - -Or generate makefiles for an all-options version: -* `cmake ../cdmath-master -DCMAKE_INSTALL_PREFIX=../cdmath_install -DCMAKE_BUILD_TYPE=Release -G"Eclipse CDT4 - Unix Makefiles" -D_ECLIPSE_VERSION=4.3 -DCDMATH_WITH_PETSC=ON -DCDMATH_WITH_PYTHON=ON -DCDMATH_WITH_POSTPRO=ON -DCDMATH_WITH_TESTS=ON -DCDMATH_WITH_DOCUMENTATION=ON` - +Simpler build for a minimum version: +* `cmake ../cdmath-master/ -DCMAKE_INSTALL_PREFIX=../cdmath_install -DCMAKE_BUILD_TYPE=Release -DCDMATH_WITH_PETSC=ON -DCDMATH_WITH_PYTHON=ON ` +> This will download and build the following dependencies +> - PETSc from http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.13.2.tar.gz +> - SLEPc from https://slepc.upv.es/download/distrib/slepc-3.13.2.tar.gz +> - HDF5 http://files.salome-platform.org/Salome/other/med-4.0.0.tar.gz +> - MEDFILE from http://files.salome-platform.org/Salome/other/med-4.0.0.tar.gz +> - MEDCOUPLING from http://files.salome-platform.org/Salome/other/medCoupling-9.4.0.tar.gz + +Advanced build for an all-options version: +* `cmake ../cdmath-master -DCMAKE_INSTALL_PREFIX=../cdmath_install -DCMAKE_BUILD_TYPE=Release -G"Eclipse CDT4 - Unix Makefiles" -D_ECLIPSE_VERSION=4.3 -DCDMATH_WITH_PETSC=ON -DCDMATH_WITH_PYTHON=ON -DCDMATH_WITH_POSTPRO=ON -DCDMATH_WITH_TESTS=ON -DCDMATH_WITH_DOCUMENTATION=ON -DPETSC_DIR=${PETSC_DIR} -DMEDFILE_ROOT_DIR=${MEDFILE_ROOT_DIR} -DMEDCOUPLING_ROOT_DIR=${MEDCOUPLING_ROOT_DIR}` +> This assumes that you have an existing +> - install of PETSc (with submodules SLEPC and HDF5) at the location given by the environment variable PETSC_DIR and the architecture variable PETSC_ARCH +> See the instructions given in [the official documentation](http://www.mcs.anl.gov/petsc/documentation/installation.html) +> - install of MED at the location given by the environment variable MEDFILE_ROOT_DIR +> - install of MEDCOUPLING at the location given by the environment variable MEDCOUPLING_ROOT_DIR + +The 3 dependencies PETSC, MED and MEDCOUPLING should have been compiled with the same version of HDF5 +Warning : the linux package libhdf5-dev is generally not compatible with the libraries MED and MEDCoupling Compile and install: * `make` -* `make install` +* `make doc install` Run unit and example tests: -* make check +* make example Run validation tests: * make validation -Notes for compilation options: -* Eclipse: The Cmake options `-G"Eclipse CDT4 - Unix Makefiles" -D_ECLIPSE_VERSION=4.3` create project files if you want to develop CDMATH with Eclipse Kepler or higher. -* HDF5: On some systems (not Ubuntu 14.04 nor Ubuntu 16.04), you may have to use the compilation option `-DHDF5_ROOT_DIR=/path/to/hdf5/library` too. -* PETSc: If the library Petsc is already installed in your system (packages libpetsc-dev for ubuntu and petsc-devel for fedora 25 and 26), you may save time and disk space by using the installed library instead of installing a new one. In order to do so use the compilation options `-DPETSC_DIR=/path/to/petsc/installation/petsc -DPETSC_ARCH=arch-linux2-c-opt`. If you prefer to compile PETSc yourself from the sources you may follow the instructions given in [the official documentation](http://www.mcs.anl.gov/petsc/documentation/installation.html). - Use of CDMATH ------------- We recommend using CDMATH in python scripts which avoids the hassle of having to edit Makefile files and compiling every C++ scripts. @@ -91,11 +97,14 @@ Then in your terminal simply type If performance or parallelism is an issue for your simulations, you can use CDMATH librairies with your C++ code : * C++ libraries: `export LD_LIBRARY_PATH=~/workspace/cdmath/cdmath_install/lib` - * To know how to include the right libraries for compilation, see the makefiles of the examples. They include the list `-linterpkernel -lmedC -lmedloader -lmedcoupling -lbase -lmesh -llinearsolver`. + * To know how to include the right libraries for compilation, see the makefiles of the examples. They include the list ` -lmedC -lmedloader -lmedcoupling -lbase -lmesh -llinearsolver`. The CDMATH environment variables consist in : - * C++ libraries: `export LD_LIBRARY_PATH=~/workspace/cdmath/cdmath_install/lib` - * Python libraries: `export PYTHONPATH=~/workspace/cdmath/cdmath_install/lib/cdmath:~/workspace/cdmath/cdmath_install/bin/cdmath` + * CDMATH C++ library path: `~/workspace/cdmath/cdmath_install/lib` + * CDMATH Python library paths: `~/workspace/cdmath/cdmath_install/lib/cdmath:~/workspace/cdmath/cdmath_install/bin/cdmath` + * PETSc, SLEPc and HDF5 library path: `${PETSC_DIR}/${PETSC_ARCH}/lib` + * MED library path: `${MEDFILE_ROOT_DIR}/lib` + * MEDCOUPLING library path: `${MEDCOUPLING_ROOT_DIR}/lib` Create Linux installation packages for CDMATH --------------------------------------------- diff --git a/CDMATH/cmake_files/FindCDMATH.cmake b/CDMATH/cmake_files/FindCDMATH.cmake old mode 100644 new mode 100755 index 6c99918..87fb033 --- a/CDMATH/cmake_files/FindCDMATH.cmake +++ b/CDMATH/cmake_files/FindCDMATH.cmake @@ -54,20 +54,32 @@ set(CDMATH_INCLUDES ${CDMATH_DIR}/include) if (NOT (IS_DIRECTORY ${CDMATH_INCLUDES}) ) message (SEND_ERROR "CDMATH_INCLUDES can not be used, ${CDMATH_INCLUDES} does not exist.") endif () +set(MED_INCLUDES ${CDMATH_DIR}/share/med/include) +if (NOT (IS_DIRECTORY ${MED_INCLUDES}) ) + message (SEND_ERROR "MED_INCLUDES can not be used, ${MED_INCLUDES} does not exist.") +endif () +set(MEDCOUPLING_INCLUDES ${CDMATH_DIR}/share/medcoupling/include) +if (NOT (IS_DIRECTORY ${MEDCOUPLING_INCLUDES}) ) + message (SEND_ERROR "MEDCOUPLING_INCLUDES can not be used, ${MEDCOUPLING_INCLUDES} does not exist.") +endif () # CDMATH libraries against which to link # This sets the variable ${CDMATH_LIBRARIES}. set(CDMATH_LIBDIR ${CDMATH_DIR}/lib) -if (NOT (IS_DIRECTORY ${CDMATH_LIBDIR}) ) +if ( NOT (IS_DIRECTORY ${CDMATH_LIBDIR}) ) message (SEND_ERROR "CDMATH_LIBDIR can not be used, ${CDMATH_LIBDIR} does not exist.") endif () -find_library (INTERPKERNEL_LIB NAMES interpkernel PATHS ${CDMATH_LIBDIR}) -find_library (MEDC_LIB NAMES medC PATHS ${CDMATH_LIBDIR}) -find_library (MEDLOADER_LIB NAMES medloader PATHS ${CDMATH_LIBDIR}) -find_library (MEDCOUPLING_LIB NAMES medcoupling PATHS ${CDMATH_LIBDIR}) find_library (CDMATHBASE_LIB NAMES base PATHS ${CDMATH_LIBDIR}) find_library (CDMATHMESH_LIB NAMES mesh PATHS ${CDMATH_LIBDIR}) -find_library (CDMATHLINEARSOLVER_LIB NAMES linearsolver PATHS ${CDMATH_LIBDIR}) +find_library (MEDC_LIB NAMES medC PATHS ${CDMATH_DIR}/share/med/lib) +find_library (MEDLOADER_LIB NAMES medloader PATHS ${CDMATH_DIR}/share/medcoupling/lib/) +find_library (MEDCOUPLING_LIB NAMES medcoupling PATHS ${CDMATH_DIR}/share/medcoupling/lib/) +#find_library (CDMATHLINEARSOLVER_LIB NAMES linearsolver PATHS ${CDMATH_LIBDIR}) set (CDMATH_LIBRARIES - ${INTERPKERNEL_LIB} ${MEDC_LIB} ${MEDLOADER_LIB} ${MEDCOUPLING_LIB} - ${CDMATHBASE_LIB} ${CDMATHMESH_LIB} ${CDMATHLINEARSOLVER_LIB}) + ${MEDC_LIB} + ${MEDLOADER_LIB} + ${MEDCOUPLING_LIB} + ${CDMATHBASE_LIB} + ${CDMATHMESH_LIB} +# ${CDMATHLINEARSOLVER_LIB} + ) diff --git a/CDMATH/cmake_files/FindPETSc.cmake b/CDMATH/cmake_files/FindPETSc.cmake old mode 100644 new mode 100755 index 649ae8e..a81c9f9 --- a/CDMATH/cmake_files/FindPETSc.cmake +++ b/CDMATH/cmake_files/FindPETSc.cmake @@ -81,8 +81,9 @@ find_path (PETSC_DIR include/petsc.h #RedHat paths /usr/include/petsc # Debian paths - /usr/lib/petscdir/3.7.6 /usr/lib/petscdir/3.7 - /usr/lib/petscdir/3.6.2 /usr/lib/petscdir/3.6 + /usr/lib/petscdir/3.12.4 /usr/lib/petscdir/3.12 #Ubuntu 20.04 + /usr/lib/petscdir/3.7.6 /usr/lib/petscdir/3.7 #Ubuntu 18.04 + /usr/lib/petscdir/3.6.2 /usr/lib/petscdir/3.6 #Ubuntu 16.04 /usr/lib/petscdir/3.5.1 /usr/lib/petscdir/3.5 /usr/lib/petscdir/3.4.2 /usr/lib/petscdir/3.4 /usr/lib/petscdir/3.3 /usr/lib/petscdir/3.2 /usr/lib/petscdir/3.1 @@ -97,9 +98,10 @@ find_program (MAKE_EXECUTABLE NAMES make gmake) if (PETSC_DIR AND NOT PETSC_ARCH) set (_petsc_arches $ENV{PETSC_ARCH} # If set, use environment variable first - linux-gnu-c-debug linux-gnu-c-opt # Debian defaults (petsc compilation) + linux-gnu-c-debug linux-gnu-c-opt # old Debian defaults (petsc compilation) + arch-linux-c-opt or arch-linux-c-debug # new Debian defaults (petsc compilation) x86_64-linux-gnu-real i686-linux-gnu-real # Debian defaults (petsc system installation) - arch-linux2-c-opt or arch-linux2-c-debug # RedHat defaults (petsc compilation) + arch-linux2-c-opt or arch-linux2-c-debug # old RedHat defaults (petsc compilation) x86_64-redhat-linux-gnu i686-redhat-linux-gnu # RedHat defaults (petsc apt installation) x86_64-unknown-linux-gnu i386-unknown-linux-gnu) set (petscconf "NOTFOUND" CACHE FILEPATH "Cleared" FORCE) diff --git a/CDMATH/cmake_files/FindPYTHON.cmake b/CDMATH/cmake_files/FindPYTHON.cmake index df658fb..8139e53 100755 --- a/CDMATH/cmake_files/FindPYTHON.cmake +++ b/CDMATH/cmake_files/FindPYTHON.cmake @@ -1,236 +1,181 @@ -# Copyright (C) 2007-2012 CEA/DEN, EDF R&D, OPEN CASCADE -# -# Copyright (C) 2003-2007 OPEN CASCADE, EADS/CCR, LIP6, CEA/DEN, -# CEDRAT, EDF R&D, LEG, PRINCIPIA R&D, BUREAU VERITAS -# -# This library is free software; you can redistribute it and/or -# modify it under the terms of the GNU Lesser General Public -# License as published by the Free Software Foundation; either -# version 2.1 of the License. -# -# This library is distributed in the hope that it will be useful, -# but WITHOUT ANY WARRANTY; without even the implied warranty of -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU -# Lesser General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public -# License along with this library; if not, write to the Free Software -# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -# -# See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com -# - -# ------ - -MESSAGE(STATUS "Check for python ...") - -# ------ - -IF(PYTHON_IS_MANDATORY STREQUAL 0) - SET(PYTHON_IS_MANDATORY 0) - SET(PYTHON_IS_OPTIONAL 1) -ENDIF(PYTHON_IS_MANDATORY STREQUAL 0) -IF(PYTHON_IS_OPTIONAL STREQUAL 0) - SET(PYTHON_IS_MANDATORY 1) - SET(PYTHON_IS_OPTIONAL 0) -ENDIF(PYTHON_IS_OPTIONAL STREQUAL 0) -IF(NOT PYTHON_IS_MANDATORY AND NOT PYTHON_IS_OPTIONAL) - SET(PYTHON_IS_MANDATORY 1) - SET(PYTHON_IS_OPTIONAL 0) -ENDIF(NOT PYTHON_IS_MANDATORY AND NOT PYTHON_IS_OPTIONAL) - -# ------ - -SET(PYTHON_STATUS 1) -IF(WITHOUT_PYTHON OR WITH_PYTHON STREQUAL 0) - SET(PYTHON_STATUS 0) - MESSAGE(STATUS "python disabled from command line.") -ENDIF(WITHOUT_PYTHON OR WITH_PYTHON STREQUAL 0) - -# ------ - -IF(PYTHON_STATUS) - IF(WITH_PYTHON) - SET(PYTHON_ROOT_USER ${WITH_PYTHON}) - ENDIF(WITH_PYTHON) - IF(NOT PYTHON_ROOT_USER) - SET(PYTHON_ROOT_USER $ENV{PYTHON_ROOT}) - ENDIF(NOT PYTHON_ROOT_USER) - IF(NOT PYTHON_ROOT_USER) - SET(PYTHON_ROOT_USER $ENV{PYTHONHOME}) - ENDIF(NOT PYTHON_ROOT_USER) -ENDIF(PYTHON_STATUS) - -# ------ - -IF(PYTHON_STATUS) - IF(PYTHON_ROOT_USER) - SET(PYTHON_FIND_PATHS_OPTION NO_DEFAULT_PATH) - ELSE(PYTHON_ROOT_USER) - SET(PYTHON_FIND_PATHS_OPTION) - ENDIF(PYTHON_ROOT_USER) -ENDIF(PYTHON_STATUS) - -# ------ - -IF(PYTHON_STATUS) - IF(WINDOWS) - IF(CMAKE_BUILD_TYPE STREQUAL Release) - SET(PYTHON_EXECUTABLE_TO_FIND python) - ELSE(CMAKE_BUILD_TYPE STREQUAL Release) - SET(PYTHON_EXECUTABLE_TO_FIND python_d) - ENDIF(CMAKE_BUILD_TYPE STREQUAL Release) - ELSE(WINDOWS) - SET(PYTHON_EXECUTABLE_TO_FIND python) - ENDIF(WINDOWS) - IF(NOT PYTHON_ROOT_USER) - SET(PYTHON_EXECUTABLE_PATHS) - ELSE(NOT PYTHON_ROOT_USER) - IF(WINDOWS) - SET(PYTHON_EXECUTABLE_PATHS ${PYTHON_ROOT_USER}) - ELSE(WINDOWS) - SET(PYTHON_EXECUTABLE_PATHS ${PYTHON_ROOT_USER}/bin) - ENDIF(WINDOWS) - ENDIF(NOT PYTHON_ROOT_USER) - FIND_PROGRAM(PYTHON_EXECUTABLE ${PYTHON_EXECUTABLE_TO_FIND} PATHS ${PYTHON_EXECUTABLE_PATHS} ${PYTHON_FIND_PATHS_OPTION}) - IF(PYTHON_EXECUTABLE) - MESSAGE(STATUS "python found: ${PYTHON_EXECUTABLE}") - IF(PYTHON_EXECUTABLE STREQUAL /usr/bin/python) - ELSE(PYTHON_EXECUTABLE STREQUAL /usr/bin/python) - SET(PYTHON_ROOT_USER ${PYTHON_EXECUTABLE}) - GET_FILENAME_COMPONENT(PYTHON_ROOT_USER ${PYTHON_ROOT_USER} PATH) - IF(NOT WINDOWS) - GET_FILENAME_COMPONENT(PYTHON_ROOT_USER ${PYTHON_ROOT_USER} PATH) - ENDIF(NOT WINDOWS) - ENDIF(PYTHON_EXECUTABLE STREQUAL /usr/bin/python) - ELSE(PYTHON_EXECUTABLE) - IF(PYTHON_ROOT_USER) - MESSAGE(STATUS "${PYTHON_EXECUTABLE_TO_FIND} not found in ${PYTHON_EXECUTABLE_PATHS}, check your PYTHON installation.") - ELSE(PYTHON_ROOT_USER) - MESSAGE(STATUS "${PYTHON_EXECUTABLE_TO_FIND} not found on system, try to use WITH_PYTHON option or PYTHON_ROOT environment variable.") - ENDIF(PYTHON_ROOT_USER) - SET(PYTHON_STATUS 0) - ENDIF(PYTHON_EXECUTABLE) -ENDIF(PYTHON_STATUS) - -# ------ - -IF(PYTHON_STATUS) - EXECUTE_PROCESS( - COMMAND ${PYTHON_EXECUTABLE} -c "import sys; sys.stdout.write(sys.version[:3])" - OUTPUT_VARIABLE PYTHON_VERSION - ) -ENDIF(PYTHON_STATUS) - -# ------ - -IF(PYTHON_STATUS) - IF(PYTHON_ROOT_USER) - SET(PYTHON_FIND_PATHS_OPTION NO_DEFAULT_PATH) - ELSE(PYTHON_ROOT_USER) - SET(PYTHON_FIND_PATHS_OPTION) - ENDIF(PYTHON_ROOT_USER) -ENDIF(PYTHON_STATUS) - -# ------ - -IF(PYTHON_STATUS) - IF(PYTHON_ROOT_USER) - SET(PYTHON_INCLUDE_PATHS ${PYTHON_ROOT_USER}/include ${PYTHON_ROOT_USER}/include/python${PYTHON_VERSION}) - ELSE(PYTHON_ROOT_USER) - SET(PYTHON_INCLUDE_PATHS /usr/include/python${PYTHON_VERSION}) - ENDIF(PYTHON_ROOT_USER) - SET(PYTHON_INCLUDE_TO_FIND Python.h) - FIND_PATH(PYTHON_INCLUDE_DIR ${PYTHON_INCLUDE_TO_FIND} PATHS ${PYTHON_INCLUDE_PATHS} ${PYTHON_FIND_PATHS_OPTION}) - SET(PYTHON_DEFINITIONS) - IF(PYTHON_INCLUDE_DIR) - SET(PYTHON_INCLUDES -I${PYTHON_INCLUDE_DIR})# to remove - SET(PYTHON_INCLUDE_DIRS ${PYTHON_INCLUDE_DIR}) - IF(WINDOWS) - IF(CMAKE_BUILD_TYPE STREQUAL Release) - ELSE(CMAKE_BUILD_TYPE STREQUAL Release) - SET(PYTHON_INCLUDES ${PYTHON_INCLUDES} -DHAVE_DEBUG_PYTHON)# to remove - SET(PYTHON_DEFINITIONS "-DHAVE_DEBUG_PYTHON") - ENDIF(CMAKE_BUILD_TYPE STREQUAL Release) - ENDIF(WINDOWS) - MESSAGE(STATUS "${PYTHON_INCLUDE_TO_FIND} found in ${PYTHON_INCLUDE_DIR}") - ELSE(PYTHON_INCLUDE_DIR) - SET(PYTHON_STATUS 0) - IF(PYTHON_ROOT_USER) - MESSAGE(STATUS "${PYTHON_INCLUDE_TO_FIND} not found in ${PYTHON_INCLUDE_PATHS}, check your PYTHON installation.") - ELSE(PYTHON_ROOT_USER) - MESSAGE(STATUS "${PYTHON_INCLUDE_TO_FIND} not found on system, try to use WITH_PYTHON option or PYTHON_ROOT environment variable.") - ENDIF(PYTHON_ROOT_USER) - ENDIF(PYTHON_INCLUDE_DIR) -ENDIF(PYTHON_STATUS) - -# ---- - -IF(PYTHON_STATUS) - IF(PYTHON_ROOT_USER) - IF(WINDOWS) - SET(PYTHON_LIB_PATHS ${PYTHON_ROOT_USER}/libs) - ELSE(WINDOWS) - SET(PYTHON_LIB_PATHS ${PYTHON_ROOT_USER}/lib ${PYTHON_ROOT_USER}/lib/python${PYTHON_VERSION}/config) - ENDIF(WINDOWS) - ELSE(PYTHON_ROOT_USER) - SET(PYTHON_LIB_PATHS) - ENDIF(PYTHON_ROOT_USER) - IF(WINDOWS) - STRING(REPLACE "." "" PYTHON_VERSION_WITHOUT_DOT ${PYTHON_VERSION}) - IF(CMAKE_BUILD_TYPE STREQUAL Release) - FIND_LIBRARY(PYTHON_LIB python${PYTHON_VERSION_WITHOUT_DOT} PATHS ${PYTHON_LIB_PATHS} ${PYTHON_FIND_PATHS_OPTION}) - ELSE(CMAKE_BUILD_TYPE STREQUAL Release) - FIND_LIBRARY(PYTHON_LIB python${PYTHON_VERSION_WITHOUT_DOT}_d PATHS ${PYTHON_LIB_PATHS} ${PYTHON_FIND_PATHS_OPTION}) - ENDIF(CMAKE_BUILD_TYPE STREQUAL Release) - ELSE(WINDOWS) - FIND_LIBRARY(PYTHON_LIB python${PYTHON_VERSION} PATHS ${PYTHON_LIB_PATHS} ${PYTHON_FIND_PATHS_OPTION}) - ENDIF(WINDOWS) - SET(PYTHON_LIBS) - IF(PYTHON_LIB) - SET(PYTHON_LIBS ${PYTHON_LIBS} ${PYTHON_LIB}) - MESSAGE(STATUS "python lib found: ${PYTHON_LIB}") - ELSE(PYTHON_LIB) - SET(PYTHON_STATUS 0) - IF(PYTHON_ROOT_USER) - MESSAGE(STATUS "python lib not found in ${PYTHON_LIB_PATHS}, check your PYTHON installation.") - ELSE(PYTHON_ROOT_USER) - MESSAGE(STATUS "python lib not found on system, try to use WITH_PYTHON option or PYTHON_ROOT environment variable.") - ENDIF(PYTHON_ROOT_USER) - ENDIF(PYTHON_LIB) -ENDIF(PYTHON_STATUS) - -# ---- - -SET(NUMPY_STATUS 0) -IF(PYTHON_STATUS) - EXECUTE_PROCESS( - COMMAND ${PYTHON_EXECUTABLE} -c "import numpy ; import sys ; sys.stdout.write(numpy.get_include())" - OUTPUT_VARIABLE NUMPY_INCLUDE_DIR - ERROR_QUIET - ) - IF(NUMPY_INCLUDE_DIR) - SET(NUMPY_STATUS 1) - ENDIF(NUMPY_INCLUDE_DIR) - IF(NUMPY_STATUS) - SET(PYTHON_INCLUDES ${PYTHON_INCLUDES} -DWITH_NUMPY -I${NUMPY_INCLUDE_DIR})# to remove - SET(PYTHON_INCLUDE_DIRS ${PYTHON_INCLUDE_DIRS} ${NUMPY_INCLUDE_DIR}) - SET(PYTHON_DEFINITIONS "${PYTHON_DEFINITIONS} -DWITH_NUMPY") - MESSAGE(STATUS "numpy found : ${NUMPY_INCLUDE_DIR}") - ELSE(NUMPY_STATUS) - MESSAGE(STATUS "numpy not found") - ENDIF(NUMPY_STATUS) -ENDIF(PYTHON_STATUS) - -# ---- - -IF(PYTHON_STATUS) - SET(PYTHON_CPPFLAGS ${PYTHON_INCLUDES})# to remove - SET(PYLOGLEVEL WARNING) -ELSE(PYTHON_STATUS) - IF(PYTHON_IS_MANDATORY) - MESSAGE(FATAL_ERROR "python not found ... mandatory ... abort") - ELSE(PYTHON_IS_MANDATORY) - MESSAGE(STATUS "python not found ... optional ... disabled") - ENDIF(PYTHON_IS_MANDATORY) -ENDIF(PYTHON_STATUS) +# Distributed under the OSI-approved BSD 3-Clause License. See accompanying +# file Copyright.txt or https://cmake.org/licensing for details. + +#[=======================================================================[.rst: +FindPython +---------- + +Find Python interpreter, compiler and development environment (include +directories and libraries). + +Three components are supported: + +* ``Interpreter``: search for Python interpreter. +* ``Compiler``: search for Python compiler. Only offered by IronPython. +* ``Development``: search for development artifacts (include directories and + libraries). + +If no ``COMPONENTS`` is specified, ``Interpreter`` is assumed. + +To ensure consistent versions between components ``Interpreter``, ``Compiler`` +and ``Development``, specify all components at the same time:: + + find_package (Python COMPONENTS Interpreter Development) + +This module looks preferably for version 3 of Python. If not found, version 2 +is searched. +To manage concurrent versions 3 and 2 of Python, use :module:`FindPython3` and +:module:`FindPython2` modules rather than this one. + +Imported Targets +^^^^^^^^^^^^^^^^ + +This module defines the following :ref:`Imported Targets `: + +``Python::Interpreter`` + Python interpreter. Target defined if component ``Interpreter`` is found. +``Python::Compiler`` + Python compiler. Target defined if component ``Compiler`` is found. +``Python::Python`` + Python library. Target defined if component ``Development`` is found. + +Result Variables +^^^^^^^^^^^^^^^^ + +This module will set the following variables in your project +(see :ref:`Standard Variable Names `): + +``Python_FOUND`` + System has the Python requested components. +``Python_Interpreter_FOUND`` + System has the Python interpreter. +``Python_EXECUTABLE`` + Path to the Python interpreter. +``Python_INTERPRETER_ID`` + A short string unique to the interpreter. Possible values include: + * Python + * ActivePython + * Anaconda + * Canopy + * IronPython +``Python_STDLIB`` + Standard platform independent installation directory. + + Information returned by + ``distutils.sysconfig.get_python_lib(plat_specific=False,standard_lib=True)``. +``Python_STDARCH`` + Standard platform dependent installation directory. + + Information returned by + ``distutils.sysconfig.get_python_lib(plat_specific=True,standard_lib=True)``. +``Python_SITELIB`` + Third-party platform independent installation directory. + + Information returned by + ``distutils.sysconfig.get_python_lib(plat_specific=False,standard_lib=False)``. +``Python_SITEARCH`` + Third-party platform dependent installation directory. + + Information returned by + ``distutils.sysconfig.get_python_lib(plat_specific=True,standard_lib=False)``. +``Python_Compiler_FOUND`` + System has the Python compiler. +``Python_COMPILER`` + Path to the Python compiler. Only offered by IronPython. +``Python_COMPILER_ID`` + A short string unique to the compiler. Possible values include: + * IronPython +``Python_Development_FOUND`` + System has the Python development artifacts. +``Python_INCLUDE_DIRS`` + The Python include directories. +``Python_LIBRARIES`` + The Python libraries. +``Python_LIBRARY_DIRS`` + The Python library directories. +``Python_RUNTIME_LIBRARY_DIRS`` + The Python runtime library directories. +``Python_VERSION`` + Python version. +``Python_VERSION_MAJOR`` + Python major version. +``Python_VERSION_MINOR`` + Python minor version. +``Python_VERSION_PATCH`` + Python patch version. + +Hints +^^^^^ + +``Python_ROOT_DIR`` + Define the root directory of a Python installation. + +``Python_USE_STATIC_LIBS`` + * If not defined, search for shared libraries and static libraries in that + order. + * If set to TRUE, search **only** for static libraries. + * If set to FALSE, search **only** for shared libraries. + +Commands +^^^^^^^^ + +This module defines the command ``Python_add_library`` which have the same +semantic as :command:`add_library` but take care of Python module naming rules +(only applied if library is of type ``MODULE``) and add dependency to target +``Python::Python``:: + + Python_add_library (my_module MODULE src1.cpp) + +If library type is not specified, ``MODULE`` is assumed. +#]=======================================================================] + + +set (_PYTHON_PREFIX Python) + +if (DEFINED Python_FIND_VERSION) + set (_Python_REQUIRED_VERSION_MAJOR ${Python_FIND_VERSION_MAJOR}) + + include (${CMAKE_CURRENT_LIST_DIR}/FindPython/Support.cmake) +else() + # iterate over versions in quiet and NOT required modes to avoid multiple + # "Found" messages and prematurally failure. + set (_Python_QUIETLY ${Python_FIND_QUIETLY}) + set (_Python_REQUIRED ${Python_FIND_REQUIRED}) + set (Python_FIND_QUIETLY TRUE) + set (Python_FIND_REQUIRED FALSE) + + set (_Python_REQUIRED_VERSIONS 3 2) + set (_Python_REQUIRED_VERSION_LAST 2) + + foreach (_Python_REQUIRED_VERSION_MAJOR IN LISTS _Python_REQUIRED_VERSIONS) + set (Python_FIND_VERSION ${_Python_REQUIRED_VERSION_MAJOR}) + include (${CMAKE_CURRENT_LIST_DIR}/FindPython/Support.cmake) + if (Python_FOUND OR + _Python_REQUIRED_VERSION_MAJOR EQUAL _Python_REQUIRED_VERSION_LAST) + break() + endif() + # clean-up some CACHE variables to ensure look-up restart from scratch + foreach (_Python_ITEM IN LISTS _Python_CACHED_VARS) + unset (${_Python_ITEM} CACHE) + endforeach() + endforeach() + + unset (Python_FIND_VERSION) + + set (Python_FIND_QUIETLY ${_Python_QUIETLY}) + set (Python_FIND_REQUIRED ${_Python_REQUIRED}) + if (Python_FIND_REQUIRED OR NOT Python_FIND_QUIETLY) + # call again validation command to get "Found" or error message + find_package_handle_standard_args (Python HANDLE_COMPONENTS + REQUIRED_VARS ${_Python_REQUIRED_VARS} + VERSION_VAR Python_VERSION) + endif() +endif() + +if (COMMAND __Python_add_library) + macro (Python_add_library) + __Python_add_library (Python ${ARGV}) + endmacro() +endif() + +unset (_PYTHON_PREFIX) diff --git a/CDMATH/cmake_files/FindParaView.cmake b/CDMATH/cmake_files/FindParaView.cmake new file mode 100755 index 0000000..c6b786d --- /dev/null +++ b/CDMATH/cmake_files/FindParaView.cmake @@ -0,0 +1,224 @@ +#[==[.md +# paraview-config.cmake + +This file is used by CMake when finding ParaView. + +The following variables are provided by this module: + + * `ParaView_VERSION`: The version of ParaView found. + * `ParaView_PREFIX_PATH`: Install prefix for ParaView. + * `PARAVIEW_USE_QT`: If ParaView's Qt GUI is available. + * `PARAVIEW_USE_MPI`: If ParaView is built with MPI support. + * `PARAVIEW_USE_PYTHON`: If ParaView is built with Python support. + * `PARAVIEW_PYTHONPATH`: Where ParaView's Python modules live under the + install prefix. Unset if Python is not available. + * `PARAVIEW_PLUGIN_SUBDIR`: The subdirectory under the library directory for + plugins. + * `ParaView_CLIENT_XML_FILES`: XML files for client applications to use to + reproduce ParaView's menu items. Only provided if `PARAVIEW_USE_QT` + is set. + * `ParaView_LIBRARIES`: The list of modules specified by `COMPONENTS` and + `OPTIONAL_COMPONENTS`. This may be used in `MODULES` arguments in the API + (e.g., `vtk_module_autoinit`). All modules are also targets and may be + linked to using `target_link_libraries`. +#]==] + +set(${CMAKE_FIND_PACKAGE_NAME}_CMAKE_MODULE_PATH_save "${CMAKE_MODULE_PATH}") +list(INSERT CMAKE_MODULE_PATH 0 + "${CMAKE_CURRENT_LIST_DIR}") + +set("${CMAKE_FIND_PACKAGE_NAME}_CMAKE_PREFIX_PATH_save" "${CMAKE_PREFIX_PATH}") +include("${CMAKE_CURRENT_LIST_DIR}/paraview-prefix.cmake") +set("${CMAKE_FIND_PACKAGE_NAME}_PREFIX_PATH" + "${_vtk_module_import_prefix}") +unset(_vtk_module_import_prefix) +list(INSERT CMAKE_PREFIX_PATH 0 + "${${CMAKE_FIND_PACKAGE_NAME}_PREFIX_PATH}") + +set("${CMAKE_FIND_PACKAGE_NAME}_VERSION" "@PARAVIEW_VERSION_FULL@") + +unset("${CMAKE_FIND_PACKAGE_NAME}_FOUND") + +set(_paraview_use_external_vtk "@PARAVIEW_USE_EXTERNAL_VTK@") +set(_paraview_find_package_args) +if (NOT _paraview_use_external_vtk) + list(APPEND _paraview_find_package_args + PATHS "${CMAKE_CURRENT_LIST_DIR}/vtk" + NO_DEFAULT_PATH) +endif () +if (${CMAKE_FIND_PACKAGE_NAME}_FIND_QUIETLY) + list(APPEND _paraview_find_package_args + QUIET) +endif () +find_package(VTK REQUIRED + ${_paraview_find_package_args}) +if (NOT VTK_FOUND) + set("${CMAKE_FIND_PACKAGE_NAME}_FOUND" 0) +endif () +unset(_paraview_find_package_args) +unset(_paraview_use_external_vtk) + +set(PARAVIEW_USE_QT "@PARAVIEW_USE_QT@") +set(PARAVIEW_USE_MPI "@PARAVIEW_USE_MPI@") +set(PARAVIEW_USE_PYTHON "@PARAVIEW_USE_PYTHON@") +set(PARAVIEW_PLUGIN_SUBDIR "paraview@paraview_version_suffix@/plugins") + +if (PARAVIEW_USE_PYTHON) + set(PARAVIEW_PYTHONPATH "@PARAVIEW_PYTHON_SITE_PACKAGES_SUFFIX@") + include("${CMAKE_CURRENT_LIST_DIR}/ParaViewPython-targets.cmake") + # Unset this for now; these targets will be defined later. + unset("${CMAKE_FIND_PACKAGE_NAME}_FOUND") + unset("${CMAKE_FIND_PACKAGE_NAME}_NOT_FOUND_MESSAGE") +endif () + +include("${CMAKE_CURRENT_LIST_DIR}/${CMAKE_FIND_PACKAGE_NAME}-targets.cmake") +include("${CMAKE_CURRENT_LIST_DIR}/${CMAKE_FIND_PACKAGE_NAME}-vtk-module-properties.cmake") + +include("${CMAKE_CURRENT_LIST_DIR}/paraview-find-package-helpers.cmake" OPTIONAL) +include("${CMAKE_CURRENT_LIST_DIR}/${CMAKE_FIND_PACKAGE_NAME}-vtk-module-find-packages.cmake") + +include("${CMAKE_CURRENT_LIST_DIR}/${CMAKE_FIND_PACKAGE_NAME}Plugins-paraview_plugins-targets-depends.cmake") +include("${CMAKE_CURRENT_LIST_DIR}/${CMAKE_FIND_PACKAGE_NAME}Plugins-targets.cmake") +include("${CMAKE_CURRENT_LIST_DIR}/${CMAKE_FIND_PACKAGE_NAME}Plugins-paraview-plugin-properties.cmake") + +include("${CMAKE_CURRENT_LIST_DIR}/ParaViewTools-targets.cmake" OPTIONAL) + +include("${CMAKE_CURRENT_LIST_DIR}/ParaViewClient.cmake") +include("${CMAKE_CURRENT_LIST_DIR}/ParaViewPlugin.cmake") +include("${CMAKE_CURRENT_LIST_DIR}/ParaViewServerManager.cmake") +include("${CMAKE_CURRENT_LIST_DIR}/ParaViewTesting.cmake") +include("${CMAKE_CURRENT_LIST_DIR}/vtkModuleWrapClientServer.cmake") + +if (@PARAVIEW_USE_PYTHON@) # PARAVIEW_USE_PYTHON + include("${CMAKE_CURRENT_LIST_DIR}/paraview.modules-vtk-python-module-properties.cmake") +endif () + +if (@PARAVIEW_USE_QT@) # PARAVIEW_USE_QT + include("${CMAKE_CURRENT_LIST_DIR}/${CMAKE_FIND_PACKAGE_NAME}Client-targets.cmake") + include("${CMAKE_CURRENT_LIST_DIR}/ParaView-client-xml.cmake") +endif () + +set(_paraview_components_to_check) +foreach (_paraview_component IN LISTS "${CMAKE_FIND_PACKAGE_NAME}_FIND_COMPONENTS") + if (DEFINED "${CMAKE_FIND_PACKAGE_NAME}_${_paraview_component}_FOUND") + # It was already not-found (likely due to `find-package` failures). + elseif (TARGET "${CMAKE_FIND_PACKAGE_NAME}::${_paraview_component}") + list(APPEND _paraview_components_to_check + "${_paraview_component}") + else () + set("${CMAKE_FIND_PACKAGE_NAME}_${_paraview_component}_FOUND" 0) + list(APPEND "${CMAKE_FIND_PACKAGE_NAME}_${_paraview_component}_NOT_FOUND_MESSAGE" + "The ${_paraview_component} component is not available.") + endif () +endforeach () +unset(_paraview_component) + +set(_paraview_vtk_components) + +while (_paraview_components_to_check) + list(GET _paraview_components_to_check 0 _paraview_component) + list(REMOVE_AT _paraview_components_to_check 0) + if (DEFINED "${CMAKE_FIND_PACKAGE_NAME}_${_paraview_component}_FOUND") + # We've already made a determiniation. + continue () + endif () + + get_property(_paraview_dependencies + TARGET "${CMAKE_FIND_PACKAGE_NAME}::${_paraview_component}" + PROPERTY "INTERFACE_paraview_module_depends") + string(REPLACE "${CMAKE_FIND_PACKAGE_NAME}::" "" _paraview_dependencies "${_paraview_dependencies}") + set(_paraview_all_dependencies_checked TRUE) + foreach (_paraview_dependency IN LISTS _paraview_dependencies) + # Handle VTK module dependencies. + string(FIND "${_paraview_component}" "VTK::" _paraview_vtk_idx) + if (NOT _paraview_vtk_idx EQUAL -1) + unset(_paraview_vtk_idx) + if (NOT TARGET "${_paraview_dependency}") + set("${CMAKE_FIND_PACKAGE_NAME}_${_paraview_component}_FOUND" 0) + list(APPEND "${CMAKE_FIND_PACKAGE_NAME}_${_paraview_component}_NOT_FOUND_MESSAGE" + "Failed to find the ${_paraview_dependency} module.") + endif () + continue () + endif () + unset(_paraview_vtk_idx) + + if (DEFINED "${CMAKE_FIND_PACKAGE_NAME}_${_paraview_dependency}_FOUND") + if (NOT ${CMAKE_FIND_PACKAGE_NAME}_${_paraview_dependency}_FOUND) + set("${CMAKE_FIND_PACKAGE_NAME}_${_paraview_component}_FOUND" 0) + list(APPEND "${CMAKE_FIND_PACKAGE_NAME}_${_paraview_component}_NOT_FOUND_MESSAGE" + "Failed to find the ${_paraview_dependency} component.") + endif () + else () + # Check its dependencies. + list(APPEND _paraview_components_to_check + "${_paraview_dependency}") + set(_paraview_all_found FALSE) + endif () + endforeach () + if (NOT DEFINED "${CMAKE_FIND_PACKAGE_NAME}_${_paraview_component}_FOUND") + if (_paraview_all_dependencies_checked) + set("${CMAKE_FIND_PACKAGE_NAME}_${_paraview_component}_FOUND" 1) + else () + list(APPEND _paraview_components_to_check + "${_paraview_component}") + endif () + endif () + unset(_paraview_all_dependencies_checked) + unset(_paraview_dependency) + unset(_paraview_dependencies) +endwhile () +unset(_paraview_component) +unset(_paraview_components_to_check) + +set(_paraview_missing_components) +foreach (_paraview_component IN LISTS "${CMAKE_FIND_PACKAGE_NAME}_FIND_COMPONENTS") + if (NOT ${CMAKE_FIND_PACKAGE_NAME}_${_paraview_component}_FOUND AND ${CMAKE_FIND_PACKAGE_NAME}_FIND_REQUIRED_${_paraview_component}) + list(APPEND _paraview_missing_components + "${_paraview_component}") + endif () +endforeach () + +if (_paraview_missing_components) + list(REMOVE_DUPLICATES _paraview_missing_components) + list(SORT _paraview_missing_components) + string(REPLACE ";" ", " _paraview_missing_components "${_paraview_missing_components}") + set("${CMAKE_FIND_PACKAGE_NAME}_FOUND" 0) + set("${CMAKE_FIND_PACKAGE_NAME}_NOT_FOUND_MESSAGE" + "Could not find the ${CMAKE_FIND_PACKAGE_NAME} package with the following required components: ${_paraview_missing_components}.") +endif () +unset(_paraview_missing_components) + +set("${CMAKE_FIND_PACKAGE_NAME}_LIBRARIES") +if (NOT DEFINED "${CMAKE_FIND_PACKAGE_NAME}_FOUND") + # If nothing went wrong, we've successfully found the package. + set("${CMAKE_FIND_PACKAGE_NAME}_FOUND" 1) + # Build the `_LIBRARIES` variable. + foreach (_paraview_component IN LISTS "${CMAKE_FIND_PACKAGE_NAME}_FIND_COMPONENTS") + list(APPEND "${CMAKE_FIND_PACKAGE_NAME}_LIBRARIES" + "${CMAKE_FIND_PACKAGE_NAME}::${_paraview_component}") + endforeach () + unset(_paraview_component) +endif () + +set(CMAKE_PREFIX_PATH "${${CMAKE_FIND_PACKAGE_NAME}_CMAKE_PREFIX_PATH_save}") +unset("${CMAKE_FIND_PACKAGE_NAME}_CMAKE_PREFIX_PATH_save") + +set(CMAKE_MODULE_PATH "${${CMAKE_FIND_PACKAGE_NAME}_CMAKE_MODULE_PATH_save}") +unset(${CMAKE_FIND_PACKAGE_NAME}_CMAKE_MODULE_PATH_save) + +# Compatibility with old code. +if (NOT ${CMAKE_FIND_PACKAGE_NAME}_FIND_VERSION) + set(PARAVIEW_USE_FILE "${CMAKE_CURRENT_LIST_DIR}/paraview-use-file-deprecated.cmake") +elseif (${CMAKE_FIND_PACKAGE_NAME}_FIND_VERSION VERSION_LESS 5.7) + set(PARAVIEW_USE_FILE "${CMAKE_CURRENT_LIST_DIR}/paraview-use-file-compat.cmake") +else () + set(PARAVIEW_USE_FILE "${CMAKE_CURRENT_LIST_DIR}/paraview-use-file-error.cmake") +endif () + +# 5.8 renamed these variables, so provide them if 5.8 is not the minimum +# requested. +if (NOT ${CMAKE_FIND_PACKAGE_NAME}_FIND_VERSION OR + ${CMAKE_FIND_PACKAGE_NAME}_FIND_VERSION VERSION_LESS "5.8") + set(PARAVIEW_BUILD_QT_GUI "${PARAVIEW_USE_QT}") + set(PARAVIEW_ENABLE_PYTHON "${PARAVIEW_USE_PYTHON}") +endif () diff --git a/CDMATH/env_CDMATH.sh b/CDMATH/env_CDMATH.sh old mode 100644 new mode 100755 index a7754a4..a7ab61b --- a/CDMATH/env_CDMATH.sh +++ b/CDMATH/env_CDMATH.sh @@ -1,23 +1,19 @@ #!/bin/bash export CDMATH_INSTALL=@CMAKE_INSTALL_PREFIX@ -export PETSC_DIR=@PETSC_DIR@ +export PETSC_DIR=@PETSC_INSTALL@ export PETSC_ARCH=@PETSC_ARCH@ -export PETSC_INCLUDES=@PETSC_INCLUDES_PATH@ -export PETSC_LIBRARIES=@PETSC_LIBRARIES@ -export SLEPC_DIR=@SLEPC_DIR@ -export SLEPC_INCLUDES=@SLEPC_INCLUDES@ -export SLEPC_LIBRARIES=@SLEPC_LIBRARIES@ +export PETSC_INCLUDES=@PETSC_INCLUDES_INSTALL@ +export PETSC_LIBRARIES=@PETSC_DIR@/@PETSC_ARCH@/lib export MEDFILE_ROOT_DIR=@MEDFILE_ROOT_DIR@ export MEDFILE_INCLUDE_DIRS=@MEDFILE_INCLUDE_DIRS@ -export MEDFILE_C_LIBRARIES=@MEDFILE_C_LIBRARIES_PATH@ +export MEDFILE_LIBRARIES=@MEDFILE_ROOT_DIR@/lib export MEDCOUPLING_ROOT_DIR=@MEDCOUPLING_ROOT_DIR@ export MEDCOUPLING_INCLUDE_DIR=@MEDCOUPLING_INCLUDE_DIR@ -export MEDCOUPLING_LIBRARIES=@MEDCOUPLING_LIBRARIES_PATH@ -export MEDCOUPLING_INSTALL_PYTHON=@MEDCOUPLING_INSTALL_PYTHON@ +export MEDCOUPLING_LIBRARIES=@MEDCOUPLING_LIBRARIES@ export PV_LIB_DIR=@PV_LIB_DIR@ export PV_PYTHON_DIR=@PV_PYTHON_DIR@ -export LD_LIBRARY_PATH=$CDMATH_INSTALL/lib:$CDMATH_INSTALL/lib/medcoupling:$CDMATH_INSTALL/lib/med:$PETSC_DIR/$PETSC_ARCH/lib:$PETSC_DIR/lib:$PETSC_LIBRARIES:$SLEPC_LIBRARIES:$PV_LIB_DIR:${LD_LIBRARY_PATH} -export PYTHONPATH=$CDMATH_INSTALL/lib/cdmath:$CDMATH_INSTALL/bin/cdmath:$CDMATH_INSTALL/bin/cdmath/postprocessing:$CDMATH_INSTALL/$MEDCOUPLING_INSTALL_PYTHON:$PV_PYTHON_DIR:${PYTHONPATH} +export LD_LIBRARY_PATH=$CDMATH_INSTALL/lib:$MEDCOUPLING_LIBRARIES:$MEDFILE_LIBRARIES:$PETSC_LIBRARIES:${PETSC_DIR}/${PETSC_ARCH}/lib:$PV_LIB_DIR:${LD_LIBRARY_PATH} +export PYTHONPATH=$CDMATH_INSTALL/lib/cdmath:$CDMATH_INSTALL/bin/cdmath:$CDMATH_INSTALL/bin/cdmath/postprocessing:$CDMATH_INSTALL/$PV_PYTHON_DIR:$MEDCOUPLING_LIBRARIES:$MEDFILE_LIBRARIES:$PETSC_LIBRARIES:${PETSC_DIR}/${PETSC_ARCH}/lib:${PYTHONPATH} diff --git a/CDMATH/linearsolver/inc/CMakeLists.txt b/CDMATH/linearsolver/inc/CMakeLists.txt old mode 100644 new mode 100755 index 0c7ec51..cb01f87 --- a/CDMATH/linearsolver/inc/CMakeLists.txt +++ b/CDMATH/linearsolver/inc/CMakeLists.txt @@ -1,4 +1,7 @@ +INCLUDE_DIRECTORIES( + ${SLEPC_INCLUDES} +) -FILE(GLOB include_linearsolver_HXX . *.hxx) +FILE(GLOB include_linearsolver_HXX . *.hxx ) INSTALL(FILES ${include_linearsolver_HXX} DESTINATION include) diff --git a/CDMATH/linearsolver/inc/SparseMatrixPetsc.hxx b/CDMATH/linearsolver/inc/SparseMatrixPetsc.hxx index 704f79e..d06cd26 100755 --- a/CDMATH/linearsolver/inc/SparseMatrixPetsc.hxx +++ b/CDMATH/linearsolver/inc/SparseMatrixPetsc.hxx @@ -14,6 +14,7 @@ #include "MEDCouplingUMesh.hxx" #include "Vector.hxx" #include + #include #include diff --git a/CDMATH/linearsolver/src/CMakeLists.txt b/CDMATH/linearsolver/src/CMakeLists.txt old mode 100644 new mode 100755 index 54a471c..bbf20ef --- a/CDMATH/linearsolver/src/CMakeLists.txt +++ b/CDMATH/linearsolver/src/CMakeLists.txt @@ -7,10 +7,6 @@ INCLUDE_DIRECTORIES( ${SLEPC_INCLUDES} ) -IF (CMAKE_CDMATH_TESTS) - SET(CMAKE_CXX_FLAGS "-fprofile-arcs -ftest-coverage") -ENDIF (CMAKE_CDMATH_TESTS) - FILE(GLOB src_linearsolver_CXX . *.cxx) ADD_LIBRARY(linearsolver SHARED ${src_linearsolver_CXX} ${MPI_CXX_LIBRARIES}) diff --git a/CDMATH/mesh/inc/Field.hxx b/CDMATH/mesh/inc/Field.hxx old mode 100644 new mode 100755 index 38e09a9..752f15c --- a/CDMATH/mesh/inc/Field.hxx +++ b/CDMATH/mesh/inc/Field.hxx @@ -245,9 +245,9 @@ class Field DoubleTab getNormEuclidean( void ) const ; - double max( void ) const ; + double max( int component=0 ) const ; - double min( void ) const ; + double min( int component=0 ) const ; void setTime ( double time, int iter ); @@ -295,11 +295,18 @@ class Field /** * Computes the maximum of each component of the field - * The field may be multicomponent so the result of the function + * The field may be multicomponent so the result of the function is a vector * return the vector of numerical value of the Linfinity norm of each component of the field */ Vector normMax() const; + /** + * Computes the maximum of each component of the field as well as the index where the maximum was found + * The field may be multicomponent so the result of the function is a vector of values and a vector of indices + * return the vector of numerical value of the Linfinity norm of each component of the field AND the corresponding vector of indices + */ + Vector componentMax(Vector & Indices) const; + const Field& operator= ( const Field& f ) ; Field operator+ ( const Field& f ) const ; diff --git a/CDMATH/mesh/src/Field.cxx b/CDMATH/mesh/src/Field.cxx old mode 100644 new mode 100755 index 4314379..64044f6 --- a/CDMATH/mesh/src/Field.cxx +++ b/CDMATH/mesh/src/Field.cxx @@ -409,29 +409,29 @@ Field::getNormEuclidean() const } double -Field::max() const +Field::max(int component) const { - if( getNumberOfComponents() !=1) - throw CdmathException("double Field::max() : field should have a single component in order to extract maximum value"); + if( component >= getNumberOfComponents() ) + throw CdmathException("double Field::max() : component number should be smaller than field number of components"); - double result=0; + double result=-1e100; for(int i=0; i= getNumberOfComponents() ) + throw CdmathException("double Field::min() : component number should be smaller than field number of components"); double result=1e100; for(int i=0; i (*this)(i,0)) - result = (*this)(i,0); + if( result > (*this)(i,component)) + result = (*this)(i,component); return result; } @@ -557,6 +557,24 @@ Field::normMax ( ) const return result; } +Vector +Field::componentMax(Vector & Indices) const +{ + int nbComp=_field->getNumberOfComponents(); + int nbElems=getNumberOfElements(); + + Vector result(nbComp);//Vector containing the Linfinity norm of each component + + for(int i=0; iresult(j)) + { + result(j)=fabs((*this)(i,j)); + Indices(j)=i; + } + return result; +} + //---------------------------------------------------------------------- double& Field::operator() ( int ielem ) diff --git a/CDMATH/postprocessing/PV_routines.py b/CDMATH/postprocessing/PV_routines.py old mode 100644 new mode 100755 index bf46a56..2891699 --- a/CDMATH/postprocessing/PV_routines.py +++ b/CDMATH/postprocessing/PV_routines.py @@ -64,9 +64,9 @@ def Slice_PV_field_data_to_numpyArray(field, inputFileName = field.getName() field.writeVTK(inputFileName) - numpy_array = Slice_PV_data_to_numpyArray(inputFileName+"_0.vtu", point, normal, resolution) + numpy_array = Slice_PV_data_to_numpyArray(inputFileName+"_1.vtu", point, normal, resolution) - os.remove(inputFileName+"_0.vtu") + os.remove(inputFileName+"_1.vtu") return numpy_array def Slice_PV_field_data_to_txt_file(field, outputFileName, diff --git a/CDMATH/postprocessing/VTK_routines.py b/CDMATH/postprocessing/VTK_routines.py old mode 100644 new mode 100755 index 14a00b8..7022789 --- a/CDMATH/postprocessing/VTK_routines.py +++ b/CDMATH/postprocessing/VTK_routines.py @@ -39,9 +39,9 @@ def Extract_field_data_over_line_to_numpyArray(field, point1, point2, resolution inputFileName = field.getName()#os.getcwd()+field.get_name() field.writeVTK(inputFileName) - numpy_array = Extract_VTK_data_over_line_to_numpyArray(inputFileName+"_0.vtu", point1, point2, resolution) + numpy_array = Extract_VTK_data_over_line_to_numpyArray(inputFileName+"_1.vtu", point1, point2, resolution) - os.remove(inputFileName+"_0.vtu") + os.remove(inputFileName+"_1.vtu") return numpy_array def Extract_field_data_over_line_to_txt_file(field, point1, point2, resolution, outputFileName): @@ -89,9 +89,9 @@ def Slice_field_data_to_numpyArray(field, inputFileName = field.getName() field.writeVTK(inputFileName) - numpy_array = Slice_VTK_data_to_numpyArray(inputFileName+"_0.vtu", point, normal, resolution) + numpy_array = Slice_VTK_data_to_numpyArray(inputFileName+"_1.vtu", point, normal, resolution) - os.remove(inputFileName+"_0.vtu") + os.remove(inputFileName+"_1.vtu") return numpy_array def Slice_field_data_to_txt_file(field, outputFileName, diff --git a/CDMATH/swig/CMakeLists.txt b/CDMATH/swig/CMakeLists.txt old mode 100644 new mode 100755 index 73af47c..c153857 --- a/CDMATH/swig/CMakeLists.txt +++ b/CDMATH/swig/CMakeLists.txt @@ -1,5 +1,12 @@ INCLUDE(${SWIG_USE_FILE}) +INCLUDE_DIRECTORIES( + ${Python_INCLUDE_DIRS} + ${MEDCOUPLING_INCLUDE_DIR} + ${BASE_DIR}/inc + ${MESH_DIR}/inc +) + SET(_extra_lib_SWIG) if (CDMATH_WITH_PETSC) INCLUDE_DIRECTORIES( @@ -19,18 +26,21 @@ SET_SOURCE_FILES_PROPERTIES(${CMAKE_BINARY_DIR}/swig/cdmath.i PROPERTIES CPLUSPL SET_SOURCE_FILES_PROPERTIES(${CMAKE_BINARY_DIR}/swig/cdmath.i PROPERTIES C OFF) SET_SOURCE_FILES_PROPERTIES(${CMAKE_BINARY_DIR}/swig/cdmath.i PROPERTIES SWIG_DEFINITIONS "-shadow") -INCLUDE_DIRECTORIES( - ${PYTHON_INCLUDE_DIRS} - ${MEDCOUPLING_INCLUDE_DIR} - ${BASE_DIR}/inc - ${MESH_DIR}/inc -) -IF(${CMAKE_VERSION} VERSION_LESS "3.8.0") +#Trying to remove warnings due to cmake policies cmp0078 and cmp0086 +IF (${CMAKE_VERSION} VERSION_GREATER "3.13.0") + cmake_policy(SET CMP0078 NEW) + IF (${CMAKE_VERSION} VERSION_GREATER "3.14.0") + cmake_policy(SET CMP0086 NEW) + ENDIF(${CMAKE_VERSION} VERSION_GREATER "3.14.0") +ENDIF(${CMAKE_VERSION} VERSION_GREATER "3.13.0") + +IF (${CMAKE_VERSION} VERSION_LESS "3.8.0") SWIG_ADD_MODULE(cdmath python ${CMAKE_BINARY_DIR}/swig/cdmath.i) -ELSE() +ELSE (${CMAKE_VERSION} VERSION_LESS "3.8.0") SWIG_ADD_LIBRARY(cdmath TYPE SHARED LANGUAGE python SOURCES ${CMAKE_BINARY_DIR}/swig/cdmath.i) -ENDIF() -SWIG_LINK_LIBRARIES(cdmath ${PYTHON_LIBS} base mesh ${medloader} ${medcoupling} ${_extra_lib_SWIG}) +ENDIF(${CMAKE_VERSION} VERSION_LESS "3.8.0") + +SWIG_LINK_LIBRARIES(cdmath ${Python_LIBRARIES} base mesh ${medloader} ${medcoupling} ${_extra_lib_SWIG}) INSTALL(TARGETS _cdmath DESTINATION lib/cdmath) INSTALL(FILES ${CMAKE_CURRENT_BINARY_DIR}/cdmath.py DESTINATION bin/cdmath) diff --git a/CDMATH/tests/CMakeLists.txt b/CDMATH/tests/CMakeLists.txt old mode 100644 new mode 100755 index 648c8db..d476cdf --- a/CDMATH/tests/CMakeLists.txt +++ b/CDMATH/tests/CMakeLists.txt @@ -1,10 +1,8 @@ -# nom du projet tests +# Nom du projet tests PROJECT(tests) CMAKE_MINIMUM_REQUIRED(VERSION 2.8) IF (CDMATH_WITH_TESTS) - ADD_SUBDIRECTORY(cdmath) - INCLUDE_DIRECTORIES( ${MEDCOUPLING_INCLUDE_DIR} ${BASE_DIR}/inc @@ -12,44 +10,49 @@ IF (CDMATH_WITH_TESTS) cdmath ) - SET(_extra_lib_TESTS) - if (CDMATH_WITH_PETSC) - INCLUDE_DIRECTORIES( - ${LINEARSOLVER_DIR}/inc - ${PETSC_INCLUDES} - ${SLEPC_INCLUDES} - ) - SET(_extra_lib_TESTS linearsolver ${PETSC_LIBRARIES} ${SLEPC_LIBRARIES}) - endif (CDMATH_WITH_PETSC) - SET(MAIN_SOURCES MainTests.cxx ) ADD_EXECUTABLE(TestCDMATH ${MAIN_SOURCES}) - if (CDMATH_WITH_PETSC) - SET_TARGET_PROPERTIES(TestCDMATH PROPERTIES COMPILE_FLAGS -DCDMATH_WITH_PETSC) - else(CDMATH_WITH_PETSC) - SET_TARGET_PROPERTIES(TestCDMATH PROPERTIES COMPILE_FLAGS "") - endif (CDMATH_WITH_PETSC) + if (CDMATH_WITH_PETSC) + INCLUDE_DIRECTORIES( + ${LINEARSOLVER_DIR}/inc + ${PETSC_INCLUDES} + ${SLEPC_INCLUDES} + ) + SET(_extra_lib_TESTS linearsolver ${PETSC_LIBRARIES} ${SLEPC_LIBRARIES}) + SET_TARGET_PROPERTIES(TestCDMATH PROPERTIES COMPILE_FLAGS -DCDMATH_WITH_PETSC) + SET(TESTS_LIBRARY_PATH ${CMAKE_BINARY_DIR}/base/lib:${CMAKE_BINARY_DIR}/mesh/lib:${CMAKE_BINARY_DIR}/linearsolver/lib:${MEDCOUPLING_ROOT_DIR}/lib:${MEDFILE_ROOT_DIR}/lib:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT}/lib ) + else (CDMATH_WITH_PETSC) + SET(_extra_lib_TESTS) + SET_TARGET_PROPERTIES(TestCDMATH PROPERTIES COMPILE_FLAGS "") + SET(TESTS_LIBRARY_PATH ${CMAKE_BINARY_DIR}/base/lib:${CMAKE_BINARY_DIR}/mesh/lib:${MEDCOUPLING_ROOT_DIR}/lib:${MEDFILE_ROOT_DIR}/lib:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT}/lib ) + endif(CDMATH_WITH_PETSC) + + if (CDMATH_WITH_PYTHON) + SET(TESTS_PYTHON_PATH ${CMAKE_BINARY_DIR}/swig:${CMAKE_BINARY_DIR}/postprocessing ) + endif(CDMATH_WITH_PYTHON) TARGET_LINK_LIBRARIES(TestCDMATH TestMesh base mesh ${CPPUNIT_LIBS} ${_extra_lib_TESTS}) ADD_TEST(UnitTestCDMATH TestCDMATH) - SET_PROPERTY(TEST UnitTestCDMATH PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib") + SET_PROPERTY(TEST UnitTestCDMATH PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}") + INSTALL(TARGETS TestCDMATH DESTINATION tests/unit_tests) + + ADD_SUBDIRECTORY(cdmath) + + IF (CDMATH_WITH_PYTHON) + ADD_SUBDIRECTORY(swig) + ENDIF (CDMATH_WITH_PYTHON) - INSTALL(TARGETS TestCDMATH DESTINATION bin/tests) ENDIF (CDMATH_WITH_TESTS) ADD_SUBDIRECTORY(ressources) -IF (CDMATH_WITH_PYTHON) - ADD_SUBDIRECTORY(swig) -ENDIF (CDMATH_WITH_PYTHON) - -FILE(COPY doc/ DESTINATION convergence) -INSTALL( DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/convergence DESTINATION share/doc/) +FILE(COPY doc/ DESTINATION convergence_tests) +INSTALL( DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/convergence_tests DESTINATION doc/) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) # Examples tests @@ -62,6 +65,8 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) add_custom_target (examples COMMAND ctest -R Example)# may be replace ctest -R with ctest -L add_custom_target (validation COMMAND ctest -R validation)# may be replace ctest -R with ctest -L + add_custom_target (spectrum COMMAND ctest -R Spectrum)# may be replace ctest -R with ctest -L + add_custom_target (beltrami COMMAND ctest -R Beltrami)# may be replace ctest -R with ctest -L add_custom_target (poisson COMMAND ctest -R Poisson)# may be replace ctest -R with ctest -L add_custom_target (diffusion COMMAND ctest -R Diffusion)# may be replace ctest -R with ctest -L add_custom_target (transport COMMAND ctest -R Transport)# may be replace ctest -R with ctest -L @@ -77,6 +82,8 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) add_custom_target (noscaling COMMAND ctest -R no_scaling)# may be replace ctest -R with ctest -L add_custom_target (2D COMMAND ctest -R 2D)# may be replace ctest -R with ctest -L add_custom_target (3D COMMAND ctest -R 3D)# may be replace ctest -R with ctest -L + add_custom_target (FE COMMAND ctest -R FE)# may be replace ctest -R with ctest -L + add_custom_target (FV COMMAND ctest -R FV)# may be replace ctest -R with ctest -L add_custom_target (shock COMMAND ctest -R Shock)# may be replace ctest -R with ctest -L add_custom_target (vortex COMMAND ctest -R Vortex)# may be replace ctest -R with ctest -L add_custom_target (riemann COMMAND ctest -R RiemannProblem)# may be replace ctest -R with ctest -L diff --git a/CDMATH/tests/cdmath/CMakeLists.txt b/CDMATH/tests/cdmath/CMakeLists.txt old mode 100644 new mode 100755 index 6082e01..c55cf74 --- a/CDMATH/tests/cdmath/CMakeLists.txt +++ b/CDMATH/tests/cdmath/CMakeLists.txt @@ -32,4 +32,4 @@ else (CDMATH_WITH_PETSC) TARGET_LINK_LIBRARIES(TestMesh base mesh medloader medcoupling med) endif (CDMATH_WITH_PETSC) -INSTALL(TARGETS TestMesh DESTINATION lib) +INSTALL(TARGETS TestMesh DESTINATION tests/unit_tests) diff --git a/CDMATH/tests/cdmath/SparseMatrixPetscTests.cxx b/CDMATH/tests/cdmath/SparseMatrixPetscTests.cxx old mode 100644 new mode 100755 index 2e1009b..ed8ef4f --- a/CDMATH/tests/cdmath/SparseMatrixPetscTests.cxx +++ b/CDMATH/tests/cdmath/SparseMatrixPetscTests.cxx @@ -129,13 +129,13 @@ SparseMatrixPetscTests::testClassSparseMatrixPetsc( void ) CPPUNIT_ASSERT_DOUBLES_EQUAL( 2, vp[1],1.e-5); std::vector< Vector > Vp = A.getEigenvectors(2); - CPPUNIT_ASSERT_DOUBLES_EQUAL( 0, Vp[0][0] - Vp[0][1],1.e-5); - CPPUNIT_ASSERT_DOUBLES_EQUAL( 0, Vp[1][0] + Vp[1][1],1.e-5); + CPPUNIT_ASSERT_DOUBLES_EQUAL( 0, abs(Vp[0][0]) - abs(Vp[0][1]),1.e-5); + CPPUNIT_ASSERT_DOUBLES_EQUAL( 0, abs(Vp[1][0]) - abs(Vp[1][1]),1.e-5); MEDCoupling::DataArrayDouble * VpArrayDouble = A.getEigenvectorsDataArrayDouble(2); const double *values=VpArrayDouble->getConstPointer(); - CPPUNIT_ASSERT_DOUBLES_EQUAL( 0, values[0] + values[1],1.e-5); - CPPUNIT_ASSERT_DOUBLES_EQUAL( 0, values[2] - values[3],1.e-5); + CPPUNIT_ASSERT_DOUBLES_EQUAL( 0, abs(values[0]) - abs(values[1]),1.e-5); + CPPUNIT_ASSERT_DOUBLES_EQUAL( 0, abs(values[2]) - abs(values[3]),1.e-5); A.setValue(0,0,-1.); A.setValue(0,1, 1.); diff --git a/CDMATH/tests/examples/BurgersEquation1D/1DBurgersEquation_shock_formation.py b/CDMATH/tests/examples/BurgersEquation1D/1DBurgersEquation_shock_formation.py old mode 100644 new mode 100755 index 61b9730..bc472d8 --- a/CDMATH/tests/examples/BurgersEquation1D/1DBurgersEquation_shock_formation.py +++ b/CDMATH/tests/examples/BurgersEquation1D/1DBurgersEquation_shock_formation.py @@ -44,7 +44,7 @@ def Flux_Godunov2(u_l, u_r): elif (u_l*u_l>u_r*u_r): flux = max(1./3.*u_l*u_l*u_l,1./3.*u_r*u_r*u_r) else: - print "u_l ",u_l, " u_r ", u_r + print( "u_l ",u_l, " u_r ", u_r ) return flux def Du_ncsv(u_l, u_i, u_r): diff --git a/CDMATH/tests/examples/CMakeLists.txt b/CDMATH/tests/examples/CMakeLists.txt old mode 100644 new mode 100755 index ead83ae..003c184 --- a/CDMATH/tests/examples/CMakeLists.txt +++ b/CDMATH/tests/examples/CMakeLists.txt @@ -5,13 +5,13 @@ file(GLOB NICE_EXAMPLES_TO_INSTALL TransportEquation Poisson1DEF Poisson2DEF Poisson2DEF_DISK Poisson2DEF_DISK_StiffBC Poisson2DEF_SQUARE_StiffBC Poisson1DVF Poisson2DVF Poisson2DVF_DISK Poisson2DVF_DISK_StiffBC Poisson3DEF Poisson3DEF_BALL Poisson3DVF Poisson3DVF_BALL Poisson3DEF_RadiatorAndWindow Poisson3DSphereEF Poisson3DTorusEF Poisson3DCubeSkinEF # Laplace-Beltrami on surface - Laplace-BeltramiSpectrum3DEF #Spectrum of Laplace operator + SpectrumLaplace2DEF SpectrumLaplace2DVF SpectrumLaplaceBeltrami3DEF #Spectrum of Laplace operator WaveSystem1DUpwind WaveSystem1DUpwind_RiemannProblem WaveSystem1Staggered_RiemannProblem WaveSystem2DUpwind_RiemannProblem WaveSystem_Stationary/WaveSystemUpwind WaveSystem_Stationary/WaveSystemCentered WaveSystem_Stationary/WaveSystemPStag WaveSystem_Stationary/WaveSystemStaggered WaveSystem_Shock/WaveSystemUpwind WaveSystem_Shock/WaveSystemCentered WaveSystem_Shock/WaveSystemPStag WaveSystem_Shock/WaveSystemStaggered ) -install(DIRECTORY ${NICE_EXAMPLES_TO_INSTALL} DESTINATION share/examples) +install(DIRECTORY ${NICE_EXAMPLES_TO_INSTALL} DESTINATION examples) IF (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_SUBDIRECTORY(TransportEquation1DUpwindExplicit) @@ -34,7 +34,9 @@ IF (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_SUBDIRECTORY(Poisson3DSphereEF) ADD_SUBDIRECTORY(Poisson3DTorusEF) ADD_SUBDIRECTORY(Poisson3DCubeSkinEF) - ADD_SUBDIRECTORY(Laplace-BeltramiSpectrum3DEF) + ADD_SUBDIRECTORY(SpectrumLaplace2DEF) + ADD_SUBDIRECTORY(SpectrumLaplace2DVF) + ADD_SUBDIRECTORY(SpectrumLaplaceBeltrami3DEF) ADD_SUBDIRECTORY(Poisson3DEF) ADD_SUBDIRECTORY(Poisson3DEF_RadiatorAndWindow) ADD_SUBDIRECTORY(Poisson3DEF_BALL) diff --git a/CDMATH/tests/examples/EulerSystem_Shock/EulerSystemUpwind/CMakeLists.txt b/CDMATH/tests/examples/EulerSystem_Shock/EulerSystemUpwind/CMakeLists.txt old mode 100644 new mode 100755 index 821ab64..7e96b52 --- a/CDMATH/tests/examples/EulerSystem_Shock/EulerSystemUpwind/CMakeLists.txt +++ b/CDMATH/tests/examples/EulerSystem_Shock/EulerSystemUpwind/CMakeLists.txt @@ -21,100 +21,100 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) SET(MESH_FILE ../../../ressources/meshSquare.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindExplicit_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/squareWithSquares.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindExplicit_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/meshCube.med ) ADD_TEST(ExampleEulerSystem_3DShock_UpwindExplicit_CUBE_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindExplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindExplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindExplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindExplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/cubeWithCubes.med ) ADD_TEST(ExampleEulerSystem_3DShock_UpwindExplicit_CUBE_cubes ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindExplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindExplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindExplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindExplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithTriangles.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindExplicit_DISK_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSquares.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindExplicit_DISK_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindExplicit_DISK_spiderWeb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithHexagons.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindExplicit_DISK_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindExplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(IMPLICIT_SCHEME 1 ) SET(MESH_FILE ../../../ressources/meshSquare.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindImplicit_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/squareWithSquares.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindImplicit_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/meshCube.med ) ADD_TEST(ExampleEulerSystem_3DShock_UpwindImplicit_CUBE_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindImplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindImplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindImplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindImplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/cubeWithCubes.med ) ADD_TEST(ExampleEulerSystem_3DShock_UpwindImplicit_CUBE_cubes ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindImplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindImplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindImplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_3DShock_UpwindImplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithTriangles.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindImplicit_DISK_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSquares.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindImplicit_DISK_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindImplicit_DISK_spiderWeb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithHexagons.med ) ADD_TEST(ExampleEulerSystem_2DShock_UpwindImplicit_DISK_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/EulerSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleEulerSystem_2DShock_UpwindImplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/EulerSystem_Shock/EulerSystemUpwind/EulerSystemUpwind.py b/CDMATH/tests/examples/EulerSystem_Shock/EulerSystemUpwind/EulerSystemUpwind.py old mode 100644 new mode 100755 index f27e3a1..01e2467 --- a/CDMATH/tests/examples/EulerSystem_Shock/EulerSystemUpwind/EulerSystemUpwind.py +++ b/CDMATH/tests/examples/EulerSystem_Shock/EulerSystemUpwind/EulerSystemUpwind.py @@ -27,7 +27,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_shock(my_mesh, isCircle): - print "Initial data : Spherical wave" + print( "Initial data : Spherical wave" ) dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -87,7 +87,7 @@ def jacobianMatrices(normale,coeff,rho_l,q_l,rho_r,q_r): u_l = q_l/rho_l; u_r = q_r/rho_r; if rho_l<0 or rho_r<0 : - print "rho_l=",rho_l, " rho_r= ",rho_r + print( "rho_l=",rho_l, " rho_r= ",rho_r ) raise ValueError("Negative density") u = (u_l*sqrt(rho_l)+u_r*sqrt(rho_r))/(sqrt(rho_l)+sqrt(rho_r)); un=u*normale; @@ -184,7 +184,7 @@ def computeDivergenceMatrix(my_mesh,implMat,Un): implMat.addValue(j*nbComp,cellAutre*nbComp,Am) implMat.addValue(j*nbComp, j*nbComp,Am*(-1.)) elif(Fk.getGroupName() != "Neumann"):#Nothing to do for Neumann boundary condition - print Fk.getGroupName() + print( Fk.getGroupName() ) raise ValueError("computeFluxes: Unknown boundary condition name"); maxAbsEigVa = max(maxAbsEigVa,abs(un+c0),abs(un-c0)); @@ -209,7 +209,7 @@ def EulerSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, i elif(filename.find("disk")>-1 or filename.find("Disk")>-1): pressure_field, velocity_field = initial_conditions_shock(my_mesh,True) else: - print "Mesh name : ", filename + print( "Mesh name : ", filename ) raise ValueError("Mesh name should contain substring square, cube or disk") #iteration vectors @@ -252,7 +252,7 @@ def EulerSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, i LS.setSndMember(Un) Un=LS.solve(); if(not LS.getStatus()): - print "Linear system did not converge ", LS.getNumberOfIter(), " GMRES iterations" + print( "Linear system did not converge ", LS.getNumberOfIter(), " GMRES iterations") raise ValueError("Pas de convergence du système linéaire"); dUn-=Un @@ -281,12 +281,12 @@ def EulerSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, i velocity_field.writeVTK("EulerSystem"+str(dim)+"DUpwind"+"_isImplicit"+str(isImplicit)+meshName+"_velocity",False); print("-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt)) - print + print() if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint") elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time) pressure_field.setTime(time,0); pressure_field.writeVTK("EulerSystem"+str(dim)+"DUpwind"+"_isImplicit"+str(isImplicit)+meshName+"_pressure_Stat"); @@ -301,17 +301,17 @@ def EulerSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, i PV_routines.Save_PV_data_to_picture_file("EulerSystem"+str(dim)+"DUpwind"+"_isImplicit"+str(isImplicit)+meshName+"_velocity_Stat"+'_0.vtu',"Velocity",'CELLS',"EulerSystem"+str(dim)+"DUpwind"+meshName+"_velocity_Stat") else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint") def solve(my_mesh,filename,resolution, isImplicit): - print "Resolution of the Euler system in dimension ", my_mesh.getSpaceDimension() + print( "Resolution of the Euler system in dimension ", my_mesh.getSpaceDimension()) if( my_mesh.getSpaceDimension()!=2): raise ValueError("Only dimension 2 simulations allowed") - print "Numerical method : upwind" - print "Initial data : spherical wave" - print "Wall boundary conditions" - print "Mesh name : ",filename , my_mesh.getNumberOfCells(), " cells" + print( "Numerical method : upwind") + print( "Initial data : spherical wave") + print( "Wall boundary conditions") + print( "Mesh name : ",filename , my_mesh.getNumberOfCells(), " cells") # Problem data tmax = 1. diff --git a/CDMATH/tests/examples/HeatEquation1DExplicit/HeatEquation1DExplicit.py b/CDMATH/tests/examples/HeatEquation1DExplicit/HeatEquation1DExplicit.py old mode 100644 new mode 100755 index bfe7c70..658941e --- a/CDMATH/tests/examples/HeatEquation1DExplicit/HeatEquation1DExplicit.py +++ b/CDMATH/tests/examples/HeatEquation1DExplicit/HeatEquation1DExplicit.py @@ -21,7 +21,7 @@ import sys from copy import deepcopy def HeatEquation1DExplicit(nx,cfl): - print "Simulation of 1D heat equation with an explicit scheme" + print( "Simulation of 1D heat equation with an explicit scheme") ##################### Simulation parameters a = 0.0 # space domain : a <= x <= b @@ -92,10 +92,10 @@ def HeatEquation1DExplicit(nx,cfl): plt.savefig("HeatEquation1D_Explicit_"+str(nx)+"Cells_CFL"+str(cfl)+"_ResultField_"+str(it)+".png") #plt.show() - print "Exact solution minimum : ", min(u_initial), "Numerical solution minimum : ", min(u) - print "Exact solution maximum : ", max(u_initial), "Numerical solution maximum : ", max(u) - print "Exact solution variation : ", np.sum([abs(u_initial[i] - u_initial[(i-1)%nx]) for i in range(nx)]), "Numerical solution variation : ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]) - print "l1 numerical error : ", dx*np.sum([abs(u[i] - u_initial[i]) for i in range(nx)]) + print( "Exact solution minimum : ", min(u_initial), "Numerical solution minimum : ", min(u) ) + print( "Exact solution maximum : ", max(u_initial), "Numerical solution maximum : ", max(u) ) + print( "Exact solution variation : ", np.sum([abs(u_initial[i] - u_initial[(i-1)%nx]) for i in range(nx)]), "Numerical solution variation : ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]) ) + print( "l1 numerical error : ", dx*np.sum([abs(u[i] - u_initial[i]) for i in range(nx)]) ) print("Simulation of heat equation with explicit scheme done.") diff --git a/CDMATH/tests/examples/HeatEquation1DImplicit/HeatEquation1DImplicit.py b/CDMATH/tests/examples/HeatEquation1DImplicit/HeatEquation1DImplicit.py old mode 100644 new mode 100755 index 64532b0..0090e51 --- a/CDMATH/tests/examples/HeatEquation1DImplicit/HeatEquation1DImplicit.py +++ b/CDMATH/tests/examples/HeatEquation1DImplicit/HeatEquation1DImplicit.py @@ -30,7 +30,7 @@ def implicitSchemeMatrix(nx,cfl): return implMat def HeatEquation1DImplicit(nx,cfl): - print "Simulation of 1D heat equation with an implicit scheme" + print( "Simulation of 1D heat equation with an implicit scheme") ##################### Simulation parameters a = 0.0 # space domain : a <= x <= b @@ -96,7 +96,7 @@ def HeatEquation1DImplicit(nx,cfl): LS.setSndMember(Un) Un=LS.solve() if(not LS.getStatus()): - print "Linear system did not converge ", iterGMRES, " GMRES iterations" + print( "Linear system did not converge ", iterGMRES, " GMRES iterations" ) raise ValueError("Pas de convergence du système linéaire"); for i in range(nx): u[i]=Un[i] @@ -117,10 +117,10 @@ def HeatEquation1DImplicit(nx,cfl): plt.savefig("HeatEquation1D_Implicit_"+str(nx)+"Cells_CFL"+str(cfl)+"_ResultField_"+str(it)+".png") #plt.show() - print "Exact solution minimum : ", min(u_initial), "Numerical solution minimum : ", min(u) - print "Exact solution maximum : ", max(u_initial), "Numerical solution maximum : ", max(u) - print "Exact solution variation : ", np.sum([abs(u_initial[i] - u_initial[(i-1)%nx]) for i in range(nx)]), "Numerical solution variation : ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]) - print "l1 numerical error : ", dx*np.sum([abs(u[i] - u_initial[i]) for i in range(nx)]) + print( "Exact solution minimum : ", min(u_initial), "Numerical solution minimum : ", min(u) ) + print( "Exact solution maximum : ", max(u_initial), "Numerical solution maximum : ", max(u) ) + print( "Exact solution variation : ", np.sum([abs(u_initial[i] - u_initial[(i-1)%nx]) for i in range(nx)]), "Numerical solution variation : ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]) ) + print( "l1 numerical error : ", dx*np.sum([abs(u[i] - u_initial[i]) for i in range(nx)]) ) print("Simulation of heat equation with implicit scheme done.") diff --git a/CDMATH/tests/examples/Poisson1DEF/CMakeLists.txt b/CDMATH/tests/examples/Poisson1DEF/CMakeLists.txt old mode 100644 new mode 100755 index 29ed476..c9b03c3 --- a/CDMATH/tests/examples/Poisson1DEF/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson1DEF/CMakeLists.txt @@ -4,8 +4,8 @@ install(FILES ${MESH_MED} DESTINATION share/examples/Poisson1DEF) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_1DEF ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteElements1DPoisson.py) - SET_PROPERTY(TEST ExamplePoisson_1DEF PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_1DEF APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_1DEF PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_1DEF APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson1DEF/FiniteElements1DPoisson.py b/CDMATH/tests/examples/Poisson1DEF/FiniteElements1DPoisson.py old mode 100644 new mode 100755 index 1222963..8e8286e --- a/CDMATH/tests/examples/Poisson1DEF/FiniteElements1DPoisson.py +++ b/CDMATH/tests/examples/Poisson1DEF/FiniteElements1DPoisson.py @@ -110,9 +110,9 @@ print("Linear system matrix building done") LS=cdmath.LinearSolver(Rigidite,RHS,100,1.E-6,"CG","ILU")#Remplacer CG par CHOLESKY pour solveur direct SolSyst=LS.solve() -print "Preconditioner used : ", LS.getNameOfPc() -print "Number of iterations used : ", LS.getNumberOfIter() -print "Final residual : ", LS.getResidu() +print( "Preconditioner used : ", LS.getNameOfPc() ) +print( "Number of iterations used : ", LS.getNumberOfIter() ) +print( "Final residual : ", LS.getResidu() ) print("Linear system solved") # Création du champ résultat @@ -156,7 +156,7 @@ for i in range(nbNodes) : print("Absolute error = max(| exact solution - numerical solution |) = ",erreur_abs ) print("Relative error = max(| exact solution - numerical solution |)/max(| exact solution |) = ",erreur_abs/max_abs_sol_exacte) -print ("Maximum numerical solution = ", max_sol_num, " Minimum numerical solution = ", min_sol_num) -print ("Maximum exact solution = ", my_RHSfield.max()/(pi*pi), " Minimum exact solution = ", my_RHSfield.min()/(pi*pi)) +print("Maximum numerical solution = ", max_sol_num, " Minimum numerical solution = ", min_sol_num) +print("Maximum exact solution = ", my_RHSfield.max()/(pi*pi), " Minimum exact solution = ", my_RHSfield.min()/(pi*pi)) assert erreur_abs/max_abs_sol_exacte <1. diff --git a/CDMATH/tests/examples/Poisson1DVF/CMakeLists.txt b/CDMATH/tests/examples/Poisson1DVF/CMakeLists.txt old mode 100644 new mode 100755 index 5fc47de..6f78283 --- a/CDMATH/tests/examples/Poisson1DVF/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson1DVF/CMakeLists.txt @@ -2,8 +2,8 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_1DVF_uniform ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes1DPoisson.py ) - SET_PROPERTY(TEST ExamplePoisson_1DVF_uniform PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_1DVF_uniform APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_1DVF_uniform PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_1DVF_uniform APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson1DVF/FiniteVolumes1DPoisson.py b/CDMATH/tests/examples/Poisson1DVF/FiniteVolumes1DPoisson.py old mode 100644 new mode 100755 index 64fbe0a..db077ed --- a/CDMATH/tests/examples/Poisson1DVF/FiniteVolumes1DPoisson.py +++ b/CDMATH/tests/examples/Poisson1DVF/FiniteVolumes1DPoisson.py @@ -50,7 +50,7 @@ for i in range(nbCells): maxNbNeighbours= max(1+Ci.getNumberOfFaces(),maxNbNeighbours) print("Right hand side discretisation done") -print "Max nb of neighbours = ", maxNbNeighbours +print( "Max nb of neighbours = ", maxNbNeighbours ) # Construction de la matrice et du vecteur second membre du système linéaire #=========================================================================== @@ -84,10 +84,10 @@ print("Linear system matrix building done") LS=cdmath.LinearSolver(Rigidite,RHS,100,1.E-6,"GMRES","ILU") SolSyst=LS.solve() -print "Preconditioner used : ", LS.getNameOfPc() -print "Number of iterations used : ", LS.getNumberOfIter() -print "Final residual : ", LS.getResidu() -print "Linear system solved" +print( "Preconditioner used : ", LS.getNameOfPc() ) +print( "Number of iterations used : ", LS.getNumberOfIter() ) +print( "Final residual : ", LS.getResidu() ) +print( "Linear system solved") # Création du champ résultat #=========================== @@ -133,7 +133,7 @@ for i in range(nbCells) : print("Absolute error = max(| exact solution - numerical solution |) = ",erreur_abs ) print("Relative error = max(| exact solution - numerical solution |)/max(| exact solution |) = ",erreur_abs/max_abs_sol_exacte) -print ("Maximum numerical solution = ", max_sol_num, " Minimum numerical solution = ", min_sol_num) -print ("Maximum exact solution = ", my_RHSfield.max()/(pi*pi), " Minimum exact solution = ", my_RHSfield.min()/(pi*pi)) +print("Maximum numerical solution = ", max_sol_num, " Minimum numerical solution = ", min_sol_num) +print("Maximum exact solution = ", my_RHSfield.max()/(pi*pi), " Minimum exact solution = ", my_RHSfield.min()/(pi*pi)) assert erreur_abs/max_abs_sol_exacte <1. diff --git a/CDMATH/tests/examples/Poisson2DEF/CMakeLists.txt b/CDMATH/tests/examples/Poisson2DEF/CMakeLists.txt old mode 100644 new mode 100755 index b95971a..8a3094e --- a/CDMATH/tests/examples/Poisson2DEF/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson2DEF/CMakeLists.txt @@ -9,8 +9,8 @@ install(FILES ${MESH_MED} DESTINATION share/examples/Poisson2DEF) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_2DEF_SQUARE ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteElements2DPoisson_SQUARE.py) - SET_PROPERTY(TEST ExamplePoisson_2DEF_SQUARE PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DEF_SQUARE APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DEF_SQUARE PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DEF_SQUARE APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson2DEF_DISK/CMakeLists.txt b/CDMATH/tests/examples/Poisson2DEF_DISK/CMakeLists.txt old mode 100644 new mode 100755 index 4e59897..3e6b99d --- a/CDMATH/tests/examples/Poisson2DEF_DISK/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson2DEF_DISK/CMakeLists.txt @@ -9,8 +9,8 @@ install(FILES ${MESH_MED} DESTINATION share/examples/Poisson2DEF_DISK) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_2DEF_DISK ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteElements2DPoisson_DISK.py) - SET_PROPERTY(TEST ExamplePoisson_2DEF_DISK PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DEF_DISK APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DEF_DISK PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DEF_DISK APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson2DEF_DISK/FiniteElements2DPoisson_DISK.py b/CDMATH/tests/examples/Poisson2DEF_DISK/FiniteElements2DPoisson_DISK.py old mode 100644 new mode 100755 index 94ccfec..6b8d6d0 --- a/CDMATH/tests/examples/Poisson2DEF_DISK/FiniteElements2DPoisson_DISK.py +++ b/CDMATH/tests/examples/Poisson2DEF_DISK/FiniteElements2DPoisson_DISK.py @@ -123,9 +123,9 @@ print("Linear system matrix building done") LS=cdmath.LinearSolver(Rigidite,RHS,100,1.E-6,"CG","ILU")#Remplacer CG par CHOLESKY pour solveur direct SolSyst=LS.solve() -print "Preconditioner used : ", LS.getNameOfPc() -print "Number of iterations used : ", LS.getNumberOfIter() -print "Final residual : ", LS.getResidu() +print( "Preconditioner used : ", LS.getNameOfPc() ) +print( "Number of iterations used : ", LS.getNumberOfIter() ) +print( "Final residual : ", LS.getResidu() ) print("Linear system solved") # Création du champ résultat diff --git a/CDMATH/tests/examples/Poisson2DEF_DISK_StiffBC/CMakeLists.txt b/CDMATH/tests/examples/Poisson2DEF_DISK_StiffBC/CMakeLists.txt old mode 100644 new mode 100755 index 0e909c5..e5d5d9a --- a/CDMATH/tests/examples/Poisson2DEF_DISK_StiffBC/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson2DEF_DISK_StiffBC/CMakeLists.txt @@ -9,8 +9,8 @@ install(FILES ${MESH_MED} DESTINATION share/examples/Poisson2DEF_DISK_StiffBC) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_2DEF_DISK_StiffBC ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteElements2DPoisson_DISK_StiffBC.py) - SET_PROPERTY(TEST ExamplePoisson_2DEF_DISK_StiffBC PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DEF_DISK_StiffBC APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DEF_DISK_StiffBC PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DEF_DISK_StiffBC APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson2DEF_DISK_StiffBC/FiniteElements2DPoisson_DISK_StiffBC.py b/CDMATH/tests/examples/Poisson2DEF_DISK_StiffBC/FiniteElements2DPoisson_DISK_StiffBC.py old mode 100644 new mode 100755 index e2a4ad0..d7e4ca2 --- a/CDMATH/tests/examples/Poisson2DEF_DISK_StiffBC/FiniteElements2DPoisson_DISK_StiffBC.py +++ b/CDMATH/tests/examples/Poisson2DEF_DISK_StiffBC/FiniteElements2DPoisson_DISK_StiffBC.py @@ -174,10 +174,10 @@ print("Linear system matrix building done") LS=cdmath.LinearSolver(Rigidite,RHS,100,1.E-6,"CG","ILU")#Remplacer CG par CHOLESKY pour solveur direct SolSyst=LS.solve() -print "Preconditioner used : ", LS.getNameOfPc() -print "Number of iterations used : ", LS.getNumberOfIter() -print "Final residual : ", LS.getResidu() -print("Linear system solved") +print( "Preconditioner used : ", LS.getNameOfPc() ) +print( "Number of iterations used : ", LS.getNumberOfIter() ) +print( "Final residual : ", LS.getResidu() ) +print( "Linear system solved") # Création du champ résultat #=========================== @@ -216,7 +216,7 @@ l2_error = (my_ExactSol - my_ResultField).normL2()[0] print("L2 absolute error = norm( exact solution - numerical solution ) = ",l2_error ) print("L2 relative error = norm( exact solution - numerical solution )/norm( exact solution ) = ",l2_error/l2_norm_sol_exacte) -print ("Maximum numerical solution = ", my_ResultField.max(), " Minimum numerical solution = ", my_ResultField.min()) -print ("Maximum exact solution = ", my_ExactSol.max(), " Minimum exact solution = ", my_ExactSol.min()) +print("Maximum numerical solution = ", my_ResultField.max(), " Minimum numerical solution = ", my_ResultField.min()) +print("Maximum exact solution = ", my_ExactSol.max(), " Minimum exact solution = ", my_ExactSol.min()) assert l2_error/l2_norm_sol_exacte <1. diff --git a/CDMATH/tests/examples/Poisson2DEF_SQUARE_StiffBC/CMakeLists.txt b/CDMATH/tests/examples/Poisson2DEF_SQUARE_StiffBC/CMakeLists.txt old mode 100644 new mode 100755 index e22fc5a..42bdb57 --- a/CDMATH/tests/examples/Poisson2DEF_SQUARE_StiffBC/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson2DEF_SQUARE_StiffBC/CMakeLists.txt @@ -9,8 +9,8 @@ install(FILES ${MESH_MED} DESTINATION share/examples/Poisson2DEF_SQUARE_StiffBC) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_2DEF_SQUARE_StiffBC ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteElements2DPoisson_SQUARE_StiffBC.py) - SET_PROPERTY(TEST ExamplePoisson_2DEF_SQUARE_StiffBC PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DEF_SQUARE_StiffBC APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DEF_SQUARE_StiffBC PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DEF_SQUARE_StiffBC APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson2DEF_SQUARE_StiffBC/FiniteElements2DPoisson_SQUARE_StiffBC.py b/CDMATH/tests/examples/Poisson2DEF_SQUARE_StiffBC/FiniteElements2DPoisson_SQUARE_StiffBC.py old mode 100644 new mode 100755 index 9360d13..1911238 --- a/CDMATH/tests/examples/Poisson2DEF_SQUARE_StiffBC/FiniteElements2DPoisson_SQUARE_StiffBC.py +++ b/CDMATH/tests/examples/Poisson2DEF_SQUARE_StiffBC/FiniteElements2DPoisson_SQUARE_StiffBC.py @@ -173,10 +173,10 @@ print("Linear system matrix building done") LS=cdmath.LinearSolver(Rigidite,RHS,100,1.E-6,"CG","ILU")#Remplacer CG par CHOLESKY pour solveur direct SolSyst=LS.solve() -print "Preconditioner used : ", LS.getNameOfPc() -print "Number of iterations used : ", LS.getNumberOfIter() -print "Final residual : ", LS.getResidu() -print("Linear system solved") +print( "Preconditioner used : ", LS.getNameOfPc() ) +print( "Number of iterations used : ", LS.getNumberOfIter() ) +print( "Final residual : ", LS.getResidu() ) +print( "Linear system solved") # Création du champ résultat #=========================== @@ -215,7 +215,7 @@ l2_error = (my_ExactSol - my_ResultField).normL2()[0] print("L2 absolute error = norm( exact solution - numerical solution ) = ",l2_error ) print("L2 relative error = norm( exact solution - numerical solution )/norm( exact solution ) = ",l2_error/l2_norm_sol_exacte) -print ("Maximum numerical solution = ", my_ResultField.max(), " Minimum numerical solution = ", my_ResultField.min()) -print ("Maximum exact solution = ", my_ExactSol.max(), " Minimum exact solution = ", my_ExactSol.min()) +print("Maximum numerical solution = ", my_ResultField.max(), " Minimum numerical solution = ", my_ResultField.min()) +print("Maximum exact solution = ", my_ExactSol.max(), " Minimum exact solution = ", my_ExactSol.min()) assert l2_error/l2_norm_sol_exacte <1. diff --git a/CDMATH/tests/examples/Poisson2DVF/CMakeLists.txt b/CDMATH/tests/examples/Poisson2DVF/CMakeLists.txt old mode 100644 new mode 100755 index 86bd872..6c4dd87 --- a/CDMATH/tests/examples/Poisson2DVF/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson2DVF/CMakeLists.txt @@ -2,44 +2,44 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_2DVF_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_SQUARE.py) - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/meshSquare.med ) ADD_TEST(ExamplePoisson_2DVF_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_SQUARE.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithLocRefSquares.med ) ADD_TEST(ExamplePoisson_2DVF_SQUARE_loc_ref ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_SQUARE.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_loc_ref PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_loc_ref APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_loc_ref PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_loc_ref APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithCheckerboardSquares.med ) ADD_TEST(ExamplePoisson_2DVF_SQUARE_checkerboard ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_SQUARE.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_checkerboard PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_checkerboard APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_checkerboard PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_checkerboard APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithHexagons.med ) ADD_TEST(ExamplePoisson_2DVF_SQUARE_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_SQUARE.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithBrickWall.med ) ADD_TEST(ExamplePoisson_2DVF_SQUARE_brickwall ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_SQUARE.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_brickwall PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_brickwall APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_brickwall PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_brickwall APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithDeformedQuadrangles.med ) ADD_TEST(ExamplePoisson_2DVF_SQUARE_deformed_quadrangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_SQUARE.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_deformed_quadrangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_deformed_quadrangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_deformed_quadrangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_SQUARE_deformed_quadrangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson2DVF_DISK/CMakeLists.txt b/CDMATH/tests/examples/Poisson2DVF_DISK/CMakeLists.txt old mode 100644 new mode 100755 index 3d66204..662147a --- a/CDMATH/tests/examples/Poisson2DVF_DISK/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson2DVF_DISK/CMakeLists.txt @@ -4,26 +4,26 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) SET(MESH_FILE ../../ressources/diskWithSquares.med ) ADD_TEST(ExamplePoisson_2DVF_DISK_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_DISK.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/diskWithTriangles.med ) ADD_TEST(ExamplePoisson_2DVF_DISK_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_DISK.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/diskWithHexagons.med ) ADD_TEST(ExamplePoisson_2DVF_DISK_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_DISK.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExamplePoisson_2DVF_DISK_spiderweb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_DISK.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_spiderweb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_spiderweb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_spiderweb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_spiderweb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson2DVF_DISK/FiniteVolumes2DPoisson_DISK.py b/CDMATH/tests/examples/Poisson2DVF_DISK/FiniteVolumes2DPoisson_DISK.py old mode 100644 new mode 100755 index 91ab5fd..e003ed6 --- a/CDMATH/tests/examples/Poisson2DVF_DISK/FiniteVolumes2DPoisson_DISK.py +++ b/CDMATH/tests/examples/Poisson2DVF_DISK/FiniteVolumes2DPoisson_DISK.py @@ -26,8 +26,8 @@ nbCells = my_mesh.getNumberOfCells() if( my_mesh.getSpaceDimension()!=2 or my_mesh.getMeshDimension()!=2) : raise ValueError("Wrong space or mesh dimension : space and mesh dimensions should be 2") -print "Mesh loading done" -print "Number of cells = ", nbCells +print( "Mesh loading done" ) +print( "Number of cells = ", nbCells ) #Discrétisation du second membre et extraction du nb max de voisins d'une cellule #================================================================================ @@ -50,7 +50,7 @@ for i in range(nbCells): maxNbNeighbours= max(1+Ci.getNumberOfFaces(),maxNbNeighbours) print("Right hand side discretisation done") -print "Maximum number of neighbours = ", maxNbNeighbours +print("Maximum number of neighbours = ", maxNbNeighbours ) # Construction de la matrice et du vecteur second membre du système linéaire #=========================================================================== @@ -87,10 +87,10 @@ print("Linear system matrix building done") LS=cdmath.LinearSolver(Rigidite,RHS,500,1.E-6,"GMRES","ILU") SolSyst=LS.solve() -print "Preconditioner used : ", LS.getNameOfPc() -print "Number of iterations used : ", LS.getNumberOfIter() -print "Final residual : ", LS.getResidu() -print "Linear system solved" +print( "Preconditioner used : ", LS.getNameOfPc() ) +print( "Number of iterations used : ", LS.getNumberOfIter() ) +print( "Final residual : ", LS.getResidu() ) +print( "Linear system solved" ) # Création du champ résultat #=========================== diff --git a/CDMATH/tests/examples/Poisson2DVF_DISK_StiffBC/CMakeLists.txt b/CDMATH/tests/examples/Poisson2DVF_DISK_StiffBC/CMakeLists.txt old mode 100644 new mode 100755 index e97511d..0ccf7bb --- a/CDMATH/tests/examples/Poisson2DVF_DISK_StiffBC/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson2DVF_DISK_StiffBC/CMakeLists.txt @@ -4,26 +4,26 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) SET(MESH_FILE ../../ressources/diskWithSquares.med ) ADD_TEST(ExamplePoisson_2DVF_DISK_StiffBC_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_DISK_StiffBC.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/diskWithTriangles.med ) ADD_TEST(ExamplePoisson_2DVF_DISK_StiffBC_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_DISK_StiffBC.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/diskWithHexagons.med ) ADD_TEST(ExamplePoisson_2DVF_DISK_StiffBC_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_DISK_StiffBC.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExamplePoisson_2DVF_DISK_StiffBC_spiderweb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes2DPoisson_DISK_StiffBC.py ${MESH_FILE}) - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_spiderweb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_spiderweb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_spiderweb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_2DVF_DISK_StiffBC_spiderweb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson2DVF_DISK_StiffBC/FiniteVolumes2DPoisson_DISK_StiffBC.py b/CDMATH/tests/examples/Poisson2DVF_DISK_StiffBC/FiniteVolumes2DPoisson_DISK_StiffBC.py old mode 100644 new mode 100755 index f5282de..b3b09aa --- a/CDMATH/tests/examples/Poisson2DVF_DISK_StiffBC/FiniteVolumes2DPoisson_DISK_StiffBC.py +++ b/CDMATH/tests/examples/Poisson2DVF_DISK_StiffBC/FiniteVolumes2DPoisson_DISK_StiffBC.py @@ -27,8 +27,8 @@ nbCells = my_mesh.getNumberOfCells() if( my_mesh.getSpaceDimension()!=2 or my_mesh.getMeshDimension()!=2) : raise ValueError("Wrong space or mesh dimension : space and mesh dimensions should be 2") -print "Mesh loading done" -print "Number of cells = ", nbCells +print( "Mesh loading done" ) +print( "Number of cells = ", nbCells ) #Discrétisation du second membre et extraction du nb max de voisins d'une cellule #================================================================================ @@ -59,7 +59,7 @@ for i in range(nbCells): maxNbNeighbours= max(1+Ci.getNumberOfFaces(),maxNbNeighbours) print("Right hand side discretisation done") -print "Maximum number of neighbours = ", maxNbNeighbours +print( "Maximum number of neighbours = ", maxNbNeighbours) # Construction de la matrice et du vecteur second membre du système linéaire #=========================================================================== @@ -104,10 +104,10 @@ print("Linear system matrix building done") LS=cdmath.LinearSolver(Rigidite,RHS,500,1.E-6,"GMRES","ILU") SolSyst=LS.solve() -print "Preconditioner used : ", LS.getNameOfPc() -print "Number of iterations used : ", LS.getNumberOfIter() -print "Final residual : ", LS.getResidu() -print "Linear system solved" +print( "Preconditioner used : ", LS.getNameOfPc() ) +print( "Number of iterations used : ", LS.getNumberOfIter() ) +print( "Final residual : ", LS.getResidu() ) +print( "Linear system solved" ) # Création du champ résultat #=========================== diff --git a/CDMATH/tests/examples/Poisson3DCubeSkinEF/CMakeLists.txt b/CDMATH/tests/examples/Poisson3DCubeSkinEF/CMakeLists.txt old mode 100644 new mode 100755 index c1c1db8..1e551a6 --- a/CDMATH/tests/examples/Poisson3DCubeSkinEF/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson3DCubeSkinEF/CMakeLists.txt @@ -9,8 +9,8 @@ install(FILES ${MESH_MED} DESTINATION share/examples/Poisson3DCubeSkinEF) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoissonBeltrami_3DFE_CUBESKIN ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteElements3DPoissonCubeSkin.py) - SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_CUBESKIN PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_CUBESKIN APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_CUBESKIN PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_CUBESKIN APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson3DEF/CMakeLists.txt b/CDMATH/tests/examples/Poisson3DEF/CMakeLists.txt old mode 100644 new mode 100755 index 2e9bdb1..59e362d --- a/CDMATH/tests/examples/Poisson3DEF/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson3DEF/CMakeLists.txt @@ -9,8 +9,8 @@ install(FILES ${MESH_MED} DESTINATION share/examples/Poisson3DEF) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_3DEF_CUBE ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteElements3DPoisson_CUBE.py) - SET_PROPERTY(TEST ExamplePoisson_3DEF_CUBE PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_3DEF_CUBE APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DEF_CUBE PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DEF_CUBE APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson3DEF_BALL/CMakeLists.txt b/CDMATH/tests/examples/Poisson3DEF_BALL/CMakeLists.txt old mode 100644 new mode 100755 index 854d190..9e64f40 --- a/CDMATH/tests/examples/Poisson3DEF_BALL/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson3DEF_BALL/CMakeLists.txt @@ -9,8 +9,8 @@ install(FILES ${MESH_MED} DESTINATION share/examples/Poisson3DEF_BALL) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_3DEF_BALL ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteElements3DPoisson_BALL.py) - SET_PROPERTY(TEST ExamplePoisson_3DEF_BALL PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_3DEF_BALL APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DEF_BALL PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DEF_BALL APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson3DEF_BALL/FiniteElements3DPoisson_BALL.py b/CDMATH/tests/examples/Poisson3DEF_BALL/FiniteElements3DPoisson_BALL.py old mode 100644 new mode 100755 index 9756e68..b53f1e0 --- a/CDMATH/tests/examples/Poisson3DEF_BALL/FiniteElements3DPoisson_BALL.py +++ b/CDMATH/tests/examples/Poisson3DEF_BALL/FiniteElements3DPoisson_BALL.py @@ -131,9 +131,9 @@ print("Linear system matrix building done") #================================= LS=cdmath.LinearSolver(Rigidite,RHS,100,1.E-6,"CG","ILU")#,"ILU" Remplacer CG par CHOLESKY pour solveur direct SolSyst=LS.solve() -print "Preconditioner used : ", LS.getNameOfPc() -print "Number of iterations used : ", LS.getNumberOfIter() -print "Final residual : ", LS.getResidu() +print("Preconditioner used : ", LS.getNameOfPc() ) +print("Number of iterations used : ", LS.getNumberOfIter() ) +print("Final residual : ", LS.getResidu() ) print("Linear system solved") # Création du champ résultat @@ -179,6 +179,6 @@ for i in range(nbNodes) : print("Absolute error = max(| exact solution - numerical solution |) = ",erreur_abs ) print("Relative error = max(| exact solution - numerical solution |)/max(| exact solution |) = ",erreur_abs/max_abs_sol_exacte) -print ("Maximum numerical solution = ", max_sol_num, " Minimum numerical solution = ", min_sol_num) +print("Maximum numerical solution = ", max_sol_num, " Minimum numerical solution = ", min_sol_num) assert erreur_abs/max_abs_sol_exacte <1. diff --git a/CDMATH/tests/examples/Poisson3DEF_RadiatorAndWindow/CMakeLists.txt b/CDMATH/tests/examples/Poisson3DEF_RadiatorAndWindow/CMakeLists.txt old mode 100644 new mode 100755 index e3312c2..758e321 --- a/CDMATH/tests/examples/Poisson3DEF_RadiatorAndWindow/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson3DEF_RadiatorAndWindow/CMakeLists.txt @@ -9,8 +9,8 @@ install(FILES ${MESH_MED} DESTINATION share/examples/Poisson3DEF_RadiatorAndWind if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_3DEF_CUBE_RadiatorAndWindow ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteElements3DPoisson_CUBE_RadiatorAndWindow.py) - SET_PROPERTY(TEST ExamplePoisson_3DEF_CUBE_RadiatorAndWindow PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_3DEF_CUBE_RadiatorAndWindow APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DEF_CUBE_RadiatorAndWindow PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DEF_CUBE_RadiatorAndWindow APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson3DEF_RadiatorAndWindow/FiniteElements3DPoisson_CUBE_RadiatorAndWindow.py b/CDMATH/tests/examples/Poisson3DEF_RadiatorAndWindow/FiniteElements3DPoisson_CUBE_RadiatorAndWindow.py old mode 100644 new mode 100755 index 08b203d..3ec911c --- a/CDMATH/tests/examples/Poisson3DEF_RadiatorAndWindow/FiniteElements3DPoisson_CUBE_RadiatorAndWindow.py +++ b/CDMATH/tests/examples/Poisson3DEF_RadiatorAndWindow/FiniteElements3DPoisson_CUBE_RadiatorAndWindow.py @@ -192,8 +192,8 @@ for j in boundaryNodes: #sauvegarde sur le disque dur du résultat dans un fichier paraview my_Temperature.writeVTK("FiniteElements3DTemperature") -print "Minimum temperature= ", my_Temperature.min(), ", maximum temperature= ", my_Temperature.max() +print( "Minimum temperature= ", my_Temperature.min(), ", maximum temperature= ", my_Temperature.max() ) assert my_Temperature.min()>= min(Tmur,Tfenetre,Tradiateur) and my_Temperature.max()<= max(Tmur,Tfenetre,Tradiateur) -print "Numerical solution of 3D Laplace equation using finite elements done" +print( "Numerical solution of 3D Laplace equation using finite elements done" ) diff --git a/CDMATH/tests/examples/Poisson3DSphereEF/CMakeLists.txt b/CDMATH/tests/examples/Poisson3DSphereEF/CMakeLists.txt old mode 100644 new mode 100755 index 1808dcb..e4a33ca --- a/CDMATH/tests/examples/Poisson3DSphereEF/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson3DSphereEF/CMakeLists.txt @@ -9,8 +9,8 @@ install(FILES ${MESH_MED} DESTINATION share/examples/Poisson3DSphereEF) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoissonBeltrami_3DFE_SPHERE ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteElements3DPoissonSphere.py) - SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_SPHERE PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_SPHERE APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_SPHERE PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_SPHERE APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson3DTorusEF/CMakeLists.txt b/CDMATH/tests/examples/Poisson3DTorusEF/CMakeLists.txt old mode 100644 new mode 100755 index 5ebbd1a..a6b6ba0 --- a/CDMATH/tests/examples/Poisson3DTorusEF/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson3DTorusEF/CMakeLists.txt @@ -9,8 +9,8 @@ install(FILES ${MESH_MED} DESTINATION share/examples/Poisson3DTorusEF) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoissonBeltrami_3DFE_TORUS ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteElements3DPoissonTorus.py) - SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_TORUS PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_TORUS APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_TORUS PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoissonBeltrami_3DFE_TORUS APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson3DTorusEF/FiniteElements3DPoissonTorus.py b/CDMATH/tests/examples/Poisson3DTorusEF/FiniteElements3DPoissonTorus.py old mode 100644 new mode 100755 index b3b4785..d99fc87 --- a/CDMATH/tests/examples/Poisson3DTorusEF/FiniteElements3DPoissonTorus.py +++ b/CDMATH/tests/examples/Poisson3DTorusEF/FiniteElements3DPoissonTorus.py @@ -174,8 +174,8 @@ print("Numerical solution of Poisson equation on a torus using finite elements d #Calcul de l'erreur commise par rapport à la solution exacte #=========================================================== -max_sol_exacte=exactSolField.getNormEuclidean().max() -erreur_max=(exactSolField - my_ResultField).getNormEuclidean().max() +max_sol_exacte=exactSolField.normMax()[0] +erreur_max=(exactSolField - my_ResultField).normMax()[0] max_sol_num=my_ResultField.max() min_sol_num=my_ResultField.min() diff --git a/CDMATH/tests/examples/Poisson3DVF/CMakeLists.txt b/CDMATH/tests/examples/Poisson3DVF/CMakeLists.txt old mode 100644 new mode 100755 index b96cf43..1a57869 --- a/CDMATH/tests/examples/Poisson3DVF/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson3DVF/CMakeLists.txt @@ -2,26 +2,26 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_3DVF_CUBE_cubes ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes3DPoisson_CUBE.py) - SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/meshCube.med ) ADD_TEST(ExamplePoisson_3DVF_CUBE_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes3DPoisson_CUBE.py) - SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/cubeWithLocRefCubes.med ) ADD_TEST(ExamplePoisson_3DVF_CUBE_loc_ref ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes3DPoisson_CUBE.py) - SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_loc_ref PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_loc_ref APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_loc_ref PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_loc_ref APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/3DCheckerboard/checkerboard_4x4x4.med ) ADD_TEST(ExamplePoisson_3DVF_CUBE_checkerboard ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes3DPoisson_CUBE.py) - SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_checkerboard PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_checkerboard APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_checkerboard PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DVF_CUBE_checkerboard APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson3DVF_BALL/CMakeLists.txt b/CDMATH/tests/examples/Poisson3DVF_BALL/CMakeLists.txt old mode 100644 new mode 100755 index fed3355..bc87002 --- a/CDMATH/tests/examples/Poisson3DVF_BALL/CMakeLists.txt +++ b/CDMATH/tests/examples/Poisson3DVF_BALL/CMakeLists.txt @@ -5,8 +5,8 @@ file(COPY ${MESH_FILE} DESTINATION ${CMAKE_CURRENT_BINARY_DIR}) if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExamplePoisson_3DVF_BALL_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/FiniteVolumes3DPoisson_BALL.py) - SET_PROPERTY(TEST ExamplePoisson_3DVF_BALL_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExamplePoisson_3DVF_BALL_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DVF_BALL_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExamplePoisson_3DVF_BALL_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/Poisson3DVF_BALL/FiniteVolumes3DPoisson_BALL.py b/CDMATH/tests/examples/Poisson3DVF_BALL/FiniteVolumes3DPoisson_BALL.py old mode 100644 new mode 100755 index 548c51b..940eb2c --- a/CDMATH/tests/examples/Poisson3DVF_BALL/FiniteVolumes3DPoisson_BALL.py +++ b/CDMATH/tests/examples/Poisson3DVF_BALL/FiniteVolumes3DPoisson_BALL.py @@ -90,9 +90,9 @@ print("Linear system matrix building done") LS=cdmath.LinearSolver(Rigidite,RHS,500,1.E-6,"GMRES","ILU") SolSyst=LS.solve() -print "Preconditioner used : ", LS.getNameOfPc() -print "Number of iterations used : ", LS.getNumberOfIter() -print "Final residual : ", LS.getResidu() +print( "Preconditioner used : ", LS.getNameOfPc() ) +print( "Number of iterations used : ", LS.getNumberOfIter() ) +print( "Final residual : ", LS.getResidu() ) print("Linear system solved") # Création du champ résultat @@ -140,6 +140,6 @@ for i in range(nbCells) : print("Absolute error = max(| exact solution - numerical solution |) = ",erreur_abs ) print("Relative error = max(| exact solution - numerical solution |)/max(| exact solution |) = ",erreur_abs/max_abs_sol_exacte) -print ("Maximum numerical solution = ", max_sol_num, " Minimum numerical solution = ", min_sol_num) +print("Maximum numerical solution = ", max_sol_num, " Minimum numerical solution = ", min_sol_num) assert erreur_abs/max_abs_sol_exacte <1. diff --git a/CDMATH/tests/examples/SpectrumLaplace2DEF/CMakeLists.txt b/CDMATH/tests/examples/SpectrumLaplace2DEF/CMakeLists.txt new file mode 100755 index 0000000..3aedd8d --- /dev/null +++ b/CDMATH/tests/examples/SpectrumLaplace2DEF/CMakeLists.txt @@ -0,0 +1,29 @@ + +if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) + + #Cartesian cells split into right triangles + ADD_TEST(ExampleSpectrumLaplace_2DEF_SQUARE_rightTriangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumLaplace2DEF_SQUARE.py) + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DEF_SQUARE_rightTriangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DEF_SQUARE_rightTriangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + + SET(MESH_FILE ../../ressources/meshSquare.med ) + SET(MESH_NAME "DelaunayTriangles" ) + ADD_TEST(ExampleSpectrumLaplace_2DEF_SQUARE_DelaunayTriangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumLaplace2DEF_SQUARE.py ${MESH_FILE} ${MESH_NAME}) + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DEF_SQUARE_DelaunayTriangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DEF_SQUARE_DelaunayTriangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + + SET(MESH_FILE ../../ressources/2DFlatCrossTriangles/squareWithFlatCrossTriangles_0.med ) + SET(MESH_NAME "flatCrossTriangles" ) + ADD_TEST(ExampleSpectrumLaplace_2DEF_SQUARE_flatCrossTriangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumLaplace2DEF_SQUARE.py ${MESH_FILE} ${MESH_NAME}) + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DEF_SQUARE_flatCrossTriangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DEF_SQUARE_flatCrossTriangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + + SET(MESH_FILE ../../ressources/2DSkinnyTriangles/squareWithSkinnyTriangles_0.med ) + SET(MESH_NAME "skinnyTriangles" ) + ADD_TEST(ExampleSpectrumLaplace_2DEF_SQUARE_skinnyTriangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumLaplace2DEF_SQUARE.py ${MESH_FILE} ${MESH_NAME}) + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DEF_SQUARE_skinnyTriangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DEF_SQUARE_skinnyTriangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + +endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) + + diff --git a/CDMATH/tests/examples/SpectrumLaplace2DEF/SpectrumLaplace2DEF_SQUARE.py b/CDMATH/tests/examples/SpectrumLaplace2DEF/SpectrumLaplace2DEF_SQUARE.py new file mode 100755 index 0000000..5443f21 --- /dev/null +++ b/CDMATH/tests/examples/SpectrumLaplace2DEF/SpectrumLaplace2DEF_SQUARE.py @@ -0,0 +1,147 @@ +# -*-coding:utf-8 -* +#=============================================================================================================================== +# Name : Calcul EF du spectre de l'opérateur de Laplace 2D -\triangle avec conditions aux limites de Dirichlet u=0 +# Author : Michaël Ndjinga +# Copyright : CEA Saclay 2020 +# Description : Utilisation de la méthode des éléménts finis P1 avec champs discrétisés aux noeuds d'un maillage triangulaire +# Création et sauvegarde des champs résultant en utilisant la librairie CDMATH +#================================================================================================================================ + +import cdmath +import sys + +if len(sys.argv) >2 :#load a mesh file + my_mesh = cdmath.Mesh(sys.argv[1]) + mesh_name=sys.argv[2] +else : #rectangular mesh split into triangles + xmin=0 + xmax=1 + ymin=0 + ymax=1 + + nx=15 + ny=15 + + my_mesh = cdmath.Mesh(xmin,xmax,nx,ymin,ymax,ny,0) + mesh_name="RightTriangles" + +if( my_mesh.getSpaceDimension()!=2 or my_mesh.getMeshDimension()!=2) : + raise ValueError("Wrong space or mesh dimension : space and mesh dimensions should be 2") +if(not my_mesh.isTriangular()) : + raise ValueError("Wrong cell types : mesh is not made of triangles") +eps=1e-6 +my_mesh.setGroupAtPlan(0.,0,eps,"DirichletBorder")#Bord GAUCHE +my_mesh.setGroupAtPlan(1.,0,eps,"DirichletBorder")#Bord DROIT +my_mesh.setGroupAtPlan(0.,1,eps,"DirichletBorder")#Bord BAS +my_mesh.setGroupAtPlan(1.,1,eps,"DirichletBorder")#Bord HAUT + +nbNodes = my_mesh.getNumberOfNodes() +nbCells = my_mesh.getNumberOfCells() + +print("Mesh loading done") +print("Number of nodes=", nbNodes) +print("Number of cells=", nbCells) + +#Détermination des noeuds intérieurs +#=================================== +nbInteriorNodes = 0 +nbBoundaryNodes = 0 +maxNbNeighbours = 0#This is to determine the number of non zero coefficients in the sparse finite element rigidity matrix +interiorNodes=[] +boundaryNodes=[] + +#parcours des noeuds pour discrétisation du second membre et extraction 1) des noeuds intérieur 2) des noeuds frontière 3) du nb max voisins d'un noeud +for i in range(nbNodes): + Ni=my_mesh.getNode(i) + if my_mesh.isBorderNode(i): # Détection des noeuds frontière + boundaryNodes.append(i) + nbBoundaryNodes=nbBoundaryNodes+1 + else: # Détection des noeuds intérieurs + interiorNodes.append(i) + nbInteriorNodes=nbInteriorNodes+1 + maxNbNeighbours= max(1+Ni.getNumberOfCells(),maxNbNeighbours) #true only in 2D, otherwise use function Ni.getNumberOfEdges() + +print("nb of interior nodes=", nbInteriorNodes) +print("nb of boundary nodes=", nbBoundaryNodes) +print("Max nb of neighbours=", maxNbNeighbours) + +# Construction de la matrice de rigidité +#======================================== +Rigidite=cdmath.SparseMatrixPetsc(nbInteriorNodes,nbInteriorNodes,maxNbNeighbours)# warning : third argument is max number of non zero coefficients per line of the matrix + +# Vecteurs gradient de la fonction de forme associée à chaque noeud d'un triangle (hypothèse 2D) +GradShapeFunc0=cdmath.Vector(2) +GradShapeFunc1=cdmath.Vector(2) +GradShapeFunc2=cdmath.Vector(2) + +nodal_volumes=cdmath.Vector(nbInteriorNodes) + +#On parcourt les triangles du domaine +for i in range(nbCells): + + Ci=my_mesh.getCell(i) + + #Contribution à la matrice de rigidité + nodeId0=Ci.getNodeId(0) + nodeId1=Ci.getNodeId(1) + nodeId2=Ci.getNodeId(2) + + N0=my_mesh.getNode(nodeId0) + N1=my_mesh.getNode(nodeId1) + N2=my_mesh.getNode(nodeId2) + + #Formule des gradients voir EF P1 -> calcul déterminants + GradShapeFunc0[0]= (N1.y()-N2.y())/2 + GradShapeFunc0[1]=-(N1.x()-N2.x())/2 + GradShapeFunc1[0]=-(N0.y()-N2.y())/2 + GradShapeFunc1[1]= (N0.x()-N2.x())/2 + GradShapeFunc2[0]= (N0.y()-N1.y())/2 + GradShapeFunc2[1]=-(N0.x()-N1.x())/2 + + #Création d'un tableau (numéro du noeud, gradient de la fonction de forme + GradShapeFuncs={nodeId0 : GradShapeFunc0} + GradShapeFuncs[nodeId1]=GradShapeFunc1 + GradShapeFuncs[nodeId2]=GradShapeFunc2 + + + # Remplissage de la matrice de rigidité et du second membre + for j in [nodeId0,nodeId1,nodeId2] : + if boundaryNodes.count(j)==0 : #seuls les noeuds intérieurs contribuent au système linéaire (matrice de rigidité et second membre) + j_int=interiorNodes.index(j)#indice du noeud j en tant que noeud intérieur + nodal_volumes[j_int]+=Ci.getMeasure()/3 + #Contribution de la cellule triangulaire i à la ligne j_int du système linéaire + for k in [nodeId0,nodeId1,nodeId2] : + if boundaryNodes.count(k)==0 : #seuls les noeuds intérieurs contribuent à la matrice du système linéaire + k_int=interiorNodes.index(k)#indice du noeud k en tant que noeud intérieur + Rigidite.addValue(j_int,k_int,GradShapeFuncs[j]*GradShapeFuncs[k]/Ci.getMeasure()) + #else: si condition limite non nulle au bord, ajouter la contribution du bord au second membre de la cellule j + +print("Stiffness matrix construction done") +quit() +# Conditionnement de la matrice de rigidité +#================================= +cond = Rigidite.getConditionNumber() +print("Condition number is ",cond) + +# Spectre de la matrice de rigidité +#================================== +#Homogénéisation de la matrice de rigidité (sinon elle tend vers zero de meme que ses valeurs propres) +for i in range(nbInteriorNodes): + nodal_volumes[i]=1/nodal_volumes[i] +Rigidite.leftDiagonalScale(nodal_volumes) + +nev=10 +d=Rigidite.getEigenvectorsDataArrayDouble(nev) +my_eigenfield = cdmath.Field("Eigenvectors field", cdmath.NODES, my_mesh, nev) +for j in range(nbInteriorNodes): + for k in range(nev): + my_eigenfield[interiorNodes[j],k]=d[j,k];#remplissage des valeurs pour les noeuds intérieurs +for j in range(nbBoundaryNodes): + for k in range(nev): + my_eigenfield[boundaryNodes[j],k]=0;#remplissage des valeurs pour les noeuds frontière (condition limite) +for k in range(nev): + my_eigenfield.setInfoOnComponent(k,d.getInfoOnComponent(k)) + +# Sauvegarde du champ résultat +#=========================== +my_eigenfield.writeVTK("spectrumFiniteElementsOn"+mesh_name+"Laplace") diff --git a/CDMATH/tests/examples/SpectrumLaplace2DVF/CMakeLists.txt b/CDMATH/tests/examples/SpectrumLaplace2DVF/CMakeLists.txt new file mode 100755 index 0000000..d4e9171 --- /dev/null +++ b/CDMATH/tests/examples/SpectrumLaplace2DVF/CMakeLists.txt @@ -0,0 +1,45 @@ + +if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) + + ADD_TEST(ExampleSpectrumLaplace_2DVF_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumLaplace2DVF_SQUARE.py ) + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + +# SET(MESH_FILE ../../ressources/squareWithLocRefSquares.med ) +# SET(MESH_NAME "LocRefSquares" ) + +# ADD_TEST(ExampleSpectrumLaplace_2DVF_SQUARE_loc_ref ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumLaplace2DVF_SQUARE.py ${MESH_FILE} ${MESH_NAME}) +# SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_loc_ref PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") +# SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_loc_ref APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + + SET(MESH_FILE ../../ressources/squareWithCheckerboardSquares.med ) + SET(MESH_NAME "Checkerboard" ) + + ADD_TEST(ExampleSpectrumLaplace_2DVF_SQUARE_checkerboard ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumLaplace2DVF_SQUARE.py ${MESH_FILE} ${MESH_NAME}) + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_checkerboard PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_checkerboard APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + + SET(MESH_FILE ../../ressources/meshSquare.med ) + SET(MESH_NAME "DelaunayTriangles" ) + + ADD_TEST(ExampleSpectrumLaplace_2DVF_SQUARE_DelaunayTriangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumLaplace2DVF_SQUARE.py ${MESH_FILE} ${MESH_NAME}) + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_DelaunayTriangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_DelaunayTriangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + + SET(MESH_FILE ../../ressources/2DFlatCrossTriangles/squareWithFlatCrossTriangles_0.med ) + SET(MESH_NAME "flatCrossTriangles" ) + + ADD_TEST(ExampleSpectrumLaplace_2DVF_SQUARE_flatCrossTriangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumLaplace2DVF_SQUARE.py ${MESH_FILE} ${MESH_NAME}) + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_flatCrossTriangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_flatCrossTriangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + + SET(MESH_FILE ../../ressources/2DSkinnyTriangles/squareWithSkinnyTriangles_0.med ) + SET(MESH_NAME "skinnyTriangles" ) + + ADD_TEST(ExampleSpectrumLaplace_2DVF_SQUARE_skinnyTriangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumLaplace2DVF_SQUARE.py ${MESH_FILE} ${MESH_NAME}) + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_skinnyTriangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplace_2DVF_SQUARE_skinnyTriangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + +endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) + + diff --git a/CDMATH/tests/examples/SpectrumLaplace2DVF/SpectrumLaplace2DVF_SQUARE.py b/CDMATH/tests/examples/SpectrumLaplace2DVF/SpectrumLaplace2DVF_SQUARE.py new file mode 100755 index 0000000..a60054c --- /dev/null +++ b/CDMATH/tests/examples/SpectrumLaplace2DVF/SpectrumLaplace2DVF_SQUARE.py @@ -0,0 +1,92 @@ +# -*-coding:utf-8 -* +#=============================================================================================================================== +# Name : Calcul VF du spectre de l'opérateur de Laplace 2D -\triangle avec conditions aux limites de Dirichlet u=0 +# Author : Michaël Ndjinga +# Copyright : CEA Saclay 2020 +# Description : Utilisation de la méthode des volumes finis P1 avec champs discrétisés aux cellules d'un maillage quelconque +# Création et sauvegarde des champs résultant en utilisant la librairie CDMATH +#================================================================================================================================ + +import cdmath +import sys + +if len(sys.argv) >2 :#non rectangular mesh + my_mesh = cdmath.Mesh(sys.argv[1]) + mesh_name=sys.argv[2] +else : #rectangular mesh +# Création d'un maillage cartésien du domaine carré [0,1]x[0,1], définition des bords +#==================================================================================== + xmin=0 + xmax=1 + ymin=0 + ymax=1 + + nx=15 + ny=15 + + my_mesh = cdmath.Mesh(xmin,xmax,nx,ymin,ymax,ny) + mesh_name="RegularGrid" + + eps=1e-6 + my_mesh.setGroupAtPlan(0,0,eps,"DirichletBorder")#Bord GAUCHE + my_mesh.setGroupAtPlan(1,0,eps,"DirichletBorder")#Bord DROIT + my_mesh.setGroupAtPlan(0,1,eps,"DirichletBorder")#Bord BAS + my_mesh.setGroupAtPlan(1,1,eps,"DirichletBorder")#Bord HAUT + +nbCells = my_mesh.getNumberOfCells() + +if( my_mesh.getSpaceDimension()!=2 or my_mesh.getMeshDimension()!=2) : + raise ValueError("Wrong space or mesh dimension : space and mesh dimensions should be 2") + +print("Mesh loading done") +print("Number of cells = ", nbCells) + +#Détermination du nb max de voisins d'une cellule +#================================================ +maxNbNeighbours=0#This is to determine the number of non zero coefficients in the sparse finite volumes rigidity matrix +#parcours des cellules pour extraction du nb max de voisins d'une cellule +for i in range(nbCells): + Ci=my_mesh.getCell(i) + # compute maximum number of neighbours + maxNbNeighbours= max(1+Ci.getNumberOfFaces(),maxNbNeighbours) + +print("Max nb of neighbours = ", maxNbNeighbours) + +# Construction de la matrice et du vecteur second membre du système linéaire +#=========================================================================== +Rigidite=cdmath.SparseMatrixPetsc(nbCells,nbCells,maxNbNeighbours)# warning : third argument is max number of non zero coefficients per line of the matrix +#Parcours des cellules du domaine +for i in range(nbCells): + Ci=my_mesh.getCell(i) + for j in range(Ci.getNumberOfFaces()):# parcours des faces voisinnes + Fj=my_mesh.getFace(Ci.getFaceId(j)) + if not Fj.isBorder(): + k=Fj.getCellId(0) + if k==i : + k=Fj.getCellId(1) + Ck=my_mesh.getCell(k) + distance=Ci.getBarryCenter().distance(Ck.getBarryCenter()) + coeff=Fj.getMeasure()/Ci.getMeasure()/distance + Rigidite.addValue(i,k,-coeff) # terme extradiagonal + else: + coeff=Fj.getMeasure()/Ci.getMeasure()/Ci.getBarryCenter().distance(Fj.getBarryCenter()) + #For the particular case where the mesh boundary does not coincide with the domain boundary + Rigidite.addValue(i,i,coeff) # terme diagonal + +print("Stiffness matrix construction done") + +# Conditionnement de la matrice de rigidité +#================================= +cond = Rigidite.getConditionNumber() +print("Condition number is ",cond) + +# Spectre de la matrice de rigidité +#================================== +nev=10 +d=Rigidite.getEigenvectorsDataArrayDouble(nev) +my_eigenfield = cdmath.Field("Eigenvectors field", cdmath.CELLS, my_mesh, nev) +my_eigenfield.setFieldByDataArrayDouble(d) + +# Sauvegarde du champ résultat +#=========================== +my_eigenfield.writeVTK("spectrumFiniteVolumesOn"+mesh_name+"Laplace") diff --git a/CDMATH/tests/examples/SpectrumLaplaceBeltrami3DEF/CMakeLists.txt b/CDMATH/tests/examples/SpectrumLaplaceBeltrami3DEF/CMakeLists.txt new file mode 100755 index 0000000..9488daf --- /dev/null +++ b/CDMATH/tests/examples/SpectrumLaplaceBeltrami3DEF/CMakeLists.txt @@ -0,0 +1,27 @@ + +if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) + + SET(MESH_FILE ../../ressources/meshSphere.med ) + SET(MESH_NAME "Sphere" ) + + ADD_TEST(ExampleSpectrumLaplaceBeltrami_3DFE_SPHERE ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumFiniteElements3DLaplace-Beltrami.py ${MESH_FILE} ${MESH_NAME} ) + SET_PROPERTY(TEST ExampleSpectrumLaplaceBeltrami_3DFE_SPHERE PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplaceBeltrami_3DFE_SPHERE APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + + SET(MESH_FILE ../../ressources/meshTorus.med ) + SET(MESH_NAME "Torus" ) + + ADD_TEST(ExampleSpectrumLaplaceBeltrami_3DFE_TORUS ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumFiniteElements3DLaplace-Beltrami.py ${MESH_FILE} ${MESH_NAME} ) + SET_PROPERTY(TEST ExampleSpectrumLaplaceBeltrami_3DFE_TORUS PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplaceBeltrami_3DFE_TORUS APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + + SET(MESH_FILE ../../ressources/meshCubeSkin.med ) + SET(MESH_NAME "CubeSkin" ) + + ADD_TEST(ExampleSpectrumLaplaceBeltrami_3DFE_CUBESKIN ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/SpectrumFiniteElements3DLaplace-Beltrami.py ${MESH_FILE} ${MESH_NAME} ) + SET_PROPERTY(TEST ExampleSpectrumLaplaceBeltrami_3DFE_CUBESKIN PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleSpectrumLaplaceBeltrami_3DFE_CUBESKIN APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") + +endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) + + diff --git a/CDMATH/tests/examples/SpectrumLaplaceBeltrami3DEF/SpectrumFiniteElements3DLaplace-Beltrami.py b/CDMATH/tests/examples/SpectrumLaplaceBeltrami3DEF/SpectrumFiniteElements3DLaplace-Beltrami.py new file mode 100755 index 0000000..59439bb --- /dev/null +++ b/CDMATH/tests/examples/SpectrumLaplaceBeltrami3DEF/SpectrumFiniteElements3DLaplace-Beltrami.py @@ -0,0 +1,133 @@ +# -*-coding:utf-8 -* +#=============================================================================================================================== +# Name : Calcul EF du spectre de l'opérateur de Laplace-Beltrami -\triangle sur une surface en 3D +# Author : Michael Ndjinga +# Copyright : CEA Saclay 2020 +# Description : Utilisation de la méthode des éléménts finis P1 avec champs discrétisés aux noeuds d'un maillage triangulaire +# Création et sauvegarde des champs résultant en utilisant la librairie CDMATH +#================================================================================================================================ + +import cdmath +import sys + +#Chargement du maillage triangulaire de la surface +#================================================= +my_mesh = cdmath.Mesh(sys.argv[1]) +mesh_name=sys.argv[2] +if(not my_mesh.isTriangular()) : + raise ValueError("Wrong cell types : mesh is not made of triangles") +if(my_mesh.getMeshDimension()!=2) : + raise ValueError("Wrong mesh dimension : expected a surface of dimension 2") +if(my_mesh.getSpaceDimension()!=3) : + raise ValueError("Wrong space dimension : expected a space of dimension 3") + +nbNodes = my_mesh.getNumberOfNodes() +nbCells = my_mesh.getNumberOfCells() + +print("Mesh building/loading done") +print("nb of nodes=", nbNodes) +print("nb of cells=", nbCells) + +maxNbNeighbours = my_mesh.getMaxNbNeighbours(cdmath.NODES)+1#This is to determine the number of non zero coefficients in the sparse finite element rigidity matrix + +# Construction de la matrice de rigidité +#======================================= +Rigidite=cdmath.SparseMatrixPetsc(nbNodes,nbNodes,maxNbNeighbours)# warning : third argument is number of non zero coefficients per line + +# Vecteurs gradient de la fonction de forme associée à chaque noeud d'un triangle +GradShapeFunc0=cdmath.Vector(3) +GradShapeFunc1=cdmath.Vector(3) +GradShapeFunc2=cdmath.Vector(3) + +normalFace0=cdmath.Vector(3) +normalFace1=cdmath.Vector(3) + +nodal_volumes=cdmath.Vector(nbNodes) + +#On parcourt les triangles du domaine +for i in range(nbCells): + + Ci=my_mesh.getCell(i) + + #Contribution à la matrice de rigidité + nodeId0=Ci.getNodeId(0) + nodeId1=Ci.getNodeId(1) + nodeId2=Ci.getNodeId(2) + N0=my_mesh.getNode(nodeId0) + N1=my_mesh.getNode(nodeId1) + N2=my_mesh.getNode(nodeId2) + + #Build normal to cell Ci + normalFace0[0]=Ci.getNormalVector(0,0) + normalFace0[1]=Ci.getNormalVector(0,1) + normalFace0[2]=Ci.getNormalVector(0,2) + normalFace1[0]=Ci.getNormalVector(1,0) + normalFace1[1]=Ci.getNormalVector(1,1) + normalFace1[2]=Ci.getNormalVector(1,2) + + normalCell = normalFace0.crossProduct(normalFace1) + normalCell = normalCell/normalCell.norm() + + cellMat=cdmath.Matrix(4) + cellMat[0,0]=N0.x() + cellMat[0,1]=N0.y() + cellMat[0,2]=N0.z() + cellMat[1,0]=N1.x() + cellMat[1,1]=N1.y() + cellMat[1,2]=N1.z() + cellMat[2,0]=N2.x() + cellMat[2,1]=N2.y() + cellMat[2,2]=N2.z() + cellMat[3,0]=normalCell[0] + cellMat[3,1]=normalCell[1] + cellMat[3,2]=normalCell[2] + cellMat[0,3]=1 + cellMat[1,3]=1 + cellMat[2,3]=1 + cellMat[3,3]=0 + + #Formule des gradients voir EF P1 -> calcul déterminants + GradShapeFunc0[0]= cellMat.partMatrix(0,0).determinant()/2 + GradShapeFunc0[1]=-cellMat.partMatrix(0,1).determinant()/2 + GradShapeFunc0[2]= cellMat.partMatrix(0,2).determinant()/2 + GradShapeFunc1[0]=-cellMat.partMatrix(1,0).determinant()/2 + GradShapeFunc1[1]= cellMat.partMatrix(1,1).determinant()/2 + GradShapeFunc1[2]=-cellMat.partMatrix(1,2).determinant()/2 + GradShapeFunc2[0]= cellMat.partMatrix(2,0).determinant()/2 + GradShapeFunc2[1]=-cellMat.partMatrix(2,1).determinant()/2 + GradShapeFunc2[2]= cellMat.partMatrix(2,2).determinant()/2 + + #Création d'un tableau (numéro du noeud, gradient de la fonction de forme + GradShapeFuncs={nodeId0 : GradShapeFunc0} + GradShapeFuncs[nodeId1]=GradShapeFunc1 + GradShapeFuncs[nodeId2]=GradShapeFunc2 + + # Remplissage de la matrice de rigidité et du second membre + for j in [nodeId0,nodeId1,nodeId2] : + nodal_volumes[j]+=Ci.getMeasure()/3 + #Contribution de la cellule triangulaire i à la ligne j du système linéaire + for k in [nodeId0,nodeId1,nodeId2] : + Rigidite.addValue(j,k,GradShapeFuncs[j]*GradShapeFuncs[k]/Ci.getMeasure()) + +print("Linear system matrix building done") + +# Conditionnement de la matrice de rigidité +#========================================== +cond = Rigidite.getConditionNumber(True) +print("Condition number is ",cond) + +# Spectre de la matrice de rigidité +#================================== +#Homogénéisation de la matrice de rigidité (sinon elle tend vers zero de meme que ses valeurs propres) +for i in range(nbNodes): + nodal_volumes[i]=1/nodal_volumes[i] +Rigidite.leftDiagonalScale(nodal_volumes) + +nev=9 +d=Rigidite.getEigenvectorsDataArrayDouble(nev) +my_eigenfield = cdmath.Field("Eigenvectors field", cdmath.NODES, my_mesh, nev) +my_eigenfield.setFieldByDataArrayDouble(d) + +# Sauvegarde du champ résultat +#=========================== +my_eigenfield.writeVTK("spectrumFiniteElementsOn"+mesh_name+"LaplaceBeltrami") diff --git a/CDMATH/tests/examples/TransportEquation/CMakeLists.txt b/CDMATH/tests/examples/TransportEquation/CMakeLists.txt old mode 100644 new mode 100755 index 331d29d..e43415f --- a/CDMATH/tests/examples/TransportEquation/CMakeLists.txt +++ b/CDMATH/tests/examples/TransportEquation/CMakeLists.txt @@ -2,8 +2,8 @@ if (CDMATH_WITH_PYTHON ) ADD_TEST(ExampleTransportEquation_2DUpwind_Explicit ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/TransportEquationUpwind.py) - SET_PROPERTY(TEST ExampleTransportEquation_2DUpwind_Explicit PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleTransportEquation_2DUpwind_Explicit APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExampleTransportEquation_2DUpwind_Explicit PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleTransportEquation_2DUpwind_Explicit APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON ) diff --git a/CDMATH/tests/examples/TransportEquation/TransportEquationUpwind.py b/CDMATH/tests/examples/TransportEquation/TransportEquationUpwind.py old mode 100644 new mode 100755 index 629cf1d..b534a9c --- a/CDMATH/tests/examples/TransportEquation/TransportEquationUpwind.py +++ b/CDMATH/tests/examples/TransportEquation/TransportEquationUpwind.py @@ -10,7 +10,7 @@ import VTK_routines precision=1e-5 def initial_conditions_transport_equation(my_mesh): - print "Initial_data","Shock" + print( "Initial_data","Shock") dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -101,7 +101,7 @@ def computeDivergenceMatrix(my_mesh,nbVoisinsMax,dt,test_bc,velocity): implMat.addValue(j*nbComp,cellAutre*nbComp,Am) implMat.addValue(j*nbComp, j*nbComp,Am*(-1.)) elif(test_bc!="Neumann" and Fk.getGroupName() != "Neumann"):#Nothing to do for Neumann boundary condition - print Fk.getGroupName() + print( Fk.getGroupName() ) raise ValueError("computeFluxes: Unknown boundary condition name"); return implMat @@ -158,7 +158,7 @@ def TransportEquationVF(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu LS.setSndMember(Un+S*dt) Un=LS.solve(); if(not LS.getStatus()): - print "Linear system did not converge ", LS.getNumberOfIter(), " GMRES iterations" + print("Linear system did not converge ", LS.getNumberOfIter(), " GMRES iterations") raise ValueError("Pas de convergence du système linéaire"); dUn-=Un @@ -174,10 +174,10 @@ def TransportEquationVF(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu #Sauvegardes if(it%output_freq==0 or it>=ntmax or isStationary or time >=tmax): - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : ", maxVector[0] + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : ", maxVector[0] ) if(isImplicit): - print "Linear system converged in ", LS.getNumberOfIter(), " GMRES iterations" + print( "Linear system converged in ", LS.getNumberOfIter(), " GMRES iterations" ) for k in range(nbCells): unknown_field[k] =Un[k] @@ -185,16 +185,16 @@ def TransportEquationVF(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu unknown_field.setTime(time,it); unknown_field.writeVTK("TransportEquation"+str(dim)+"DUpwind"+meshName,False); - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : ", maxVector[0] + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : ", maxVector[0] ) if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" ) raise ValueError("Maximum number of time steps reached : Stationary state not found !!!!!!!") elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time) if(test_bc=="Periodic"): - print "Mass loss: ", (total_mass_initial-unknown_field.integral()).norm(), " precision required= ", precision + print( "Mass loss: ", (total_mass_initial-unknown_field.integral()).norm(), " precision required= ", precision ) assert (total_mass_initial-unknown_field.integral()).norm() max_initial ): - print "-- Iter: " + str(it) + " max principle violated : max(t) > max(0) : max(t)= ",max(u), " max(0)= ", max_initial + print( "-- Iter: " + str(it) + " max principle violated : max(t) > max(0) : max(t)= ",max(u), " max(0)= ", max_initial ) if ( min(u) < min_initial ): - print "-- Iter: " + str(it) + " min principle violated : min(t) < min(0) : min(t)= ",min(u), " min(0)= ", min_initial + print( "-- Iter: " + str(it) + " min principle violated : min(t) < min(0) : min(t)= ",min(u), " min(0)= ", min_initial ) if ( np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]) > total_var_initial ): - print "-- Iter: " + str(it) + " total variation increased : var(t) > var(0) : var(t)= ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]), " var(0)= ", total_var_initial + print( "-- Iter: " + str(it) + " total variation increased : var(t) > var(0) : var(t)= ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]), " var(0)= ", total_var_initial ) time += dt it += 1 @@ -119,15 +119,15 @@ def Transport1DCenteredImplicit(nx,cfl): line1.set_ydata(u) writer.grab_frame() if (it % output_freq == 0): - print("-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt)) + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) np.savetxt( "TransportEquation_CenteredImplicit_"+str(nx)+"Cells_CFL"+str(cfl)+"_ResultField_"+str(it)+".txt", u, delimiter="\n") plt.savefig("TransportEquation_CenteredImplicit_"+str(nx)+"Cells_CFL"+str(cfl)+"_ResultField_"+str(it)+".png") #plt.show() - print "Exact solution minimum : ", min(u_initial), "Numerical solution minimum : ", min(u) - print "Exact solution maximum : ", max(u_initial), "Numerical solution maximum : ", max(u) - print "Exact solution variation : ", np.sum([abs(u_initial[i] - u_initial[(i-1)%nx]) for i in range(nx)]), "Numerical solution variation : ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]) - print "l1 numerical error : ", dx*np.sum([abs(u[i] - u_initial[i]) for i in range(nx)]) + print( "Exact solution minimum : ", min(u_initial), "Numerical solution minimum : ", min(u) ) + print( "Exact solution maximum : ", max(u_initial), "Numerical solution maximum : ", max(u) ) + print( "Exact solution variation : ", np.sum([abs(u_initial[i] - u_initial[(i-1)%nx]) for i in range(nx)]), "Numerical solution variation : ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]) ) + print( "l1 numerical error : ", dx*np.sum([abs(u[i] - u_initial[i]) for i in range(nx)]) ) print("Simulation of transport equation with implicit centered scheme done.") diff --git a/CDMATH/tests/examples/TransportEquation1DUpwindExplicit/1DTransportEquationUpwindExplicit.py b/CDMATH/tests/examples/TransportEquation1DUpwindExplicit/1DTransportEquationUpwindExplicit.py old mode 100644 new mode 100755 index 9ac84c9..d49da95 --- a/CDMATH/tests/examples/TransportEquation1DUpwindExplicit/1DTransportEquationUpwindExplicit.py +++ b/CDMATH/tests/examples/TransportEquation1DUpwindExplicit/1DTransportEquationUpwindExplicit.py @@ -21,7 +21,7 @@ import sys from copy import deepcopy def Transport1DUpwindExplicit(nx,cfl): - print "Simulation of 1D transport equation with explicit upwind scheme" + print( "Simulation of 1D transport equation with explicit upwind scheme" ) ##################### Simulation parameters a = 0.0 # space domain : a <= x <= b @@ -92,10 +92,10 @@ def Transport1DUpwindExplicit(nx,cfl): plt.savefig("TransportEquation_UpwindExplicit_"+str(nx)+"Cells_CFL"+str(cfl)+"_ResultField_"+str(it)+".png") #plt.show() - print "Exact solution minimum : ", min(u_initial), "Numerical solution minimum : ", min(u) - print "Exact solution maximum : ", max(u_initial), "Numerical solution maximum : ", max(u) - print "Exact solution variation : ", np.sum([abs(u_initial[i] - u_initial[(i-1)%nx]) for i in range(nx)]), "Numerical solution variation : ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]) - print "l1 numerical error : ", dx*np.sum([abs(u[i] - u_initial[i]) for i in range(nx)]) + print( "Exact solution minimum : ", min(u_initial), "Numerical solution minimum : ", min(u) ) + print( "Exact solution maximum : ", max(u_initial), "Numerical solution maximum : ", max(u) ) + print( "Exact solution variation : ", np.sum([abs(u_initial[i] - u_initial[(i-1)%nx]) for i in range(nx)]), "Numerical solution variation : ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]) ) + print( "l1 numerical error : ", dx*np.sum([abs(u[i] - u_initial[i]) for i in range(nx)]) ) print("Simulation of transport equation with explicit upwind scheme done.") diff --git a/CDMATH/tests/examples/TransportEquation1DUpwindImplicit/1DTransportEquationUpwindImplicit.py b/CDMATH/tests/examples/TransportEquation1DUpwindImplicit/1DTransportEquationUpwindImplicit.py old mode 100644 new mode 100755 index f9d212d..84ddf39 --- a/CDMATH/tests/examples/TransportEquation1DUpwindImplicit/1DTransportEquationUpwindImplicit.py +++ b/CDMATH/tests/examples/TransportEquation1DUpwindImplicit/1DTransportEquationUpwindImplicit.py @@ -31,7 +31,7 @@ def upwindSchemeMatrix(nx,cfl): return upwindMat def Transport1DUpwindImplicit(nx,cfl): - print "Simulation of 1D transport equation with implicit upwind scheme" + print( "Simulation of 1D transport equation with implicit upwind scheme" ) ##################### Simulation parameters a = 0.0 # space domain : a <= x <= b @@ -98,7 +98,7 @@ def Transport1DUpwindImplicit(nx,cfl): LS.setSndMember(Un) Un=LS.solve() if(not LS.getStatus()): - print "Linear system did not converge ", iterGMRES, " GMRES iterations" + print( "Linear system did not converge ", iterGMRES, " GMRES iterations") raise ValueError("Pas de convergence du système linéaire"); for i in range(nx): u[i]=Un[i] @@ -119,10 +119,10 @@ def Transport1DUpwindImplicit(nx,cfl): plt.savefig("TransportEquation_UpwindImplicit_"+str(nx)+"Cells_CFL"+str(cfl)+"_ResultField_"+str(it)+".png") #plt.show() - print "Exact solution minimum : ", min(u_initial), "Numerical solution minimum : ", min(u) - print "Exact solution maximum : ", max(u_initial), "Numerical solution maximum : ", max(u) - print "Exact solution variation : ", np.sum([abs(u_initial[i] - u_initial[(i-1)%nx]) for i in range(nx)]), "Numerical solution variation : ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]) - print "l1 numerical error : ", dx*np.sum([abs(u[i] - u_initial[i]) for i in range(nx)]) + print( "Exact solution minimum : ", min(u_initial), "Numerical solution minimum : ", min(u) ) + print( "Exact solution maximum : ", max(u_initial), "Numerical solution maximum : ", max(u) ) + print( "Exact solution variation : ", np.sum([abs(u_initial[i] - u_initial[(i-1)%nx]) for i in range(nx)]), "Numerical solution variation : ", np.sum([abs(u[i] - u[(i-1)%nx]) for i in range(nx)]) ) + print( "l1 numerical error : ", dx*np.sum([abs(u[i] - u_initial[i]) for i in range(nx)]) ) print("Simulation of transport equation with implicit upwind scheme done.") diff --git a/CDMATH/tests/examples/WaveSystem1DStaggered_RiemannProblem/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem1DStaggered_RiemannProblem/CMakeLists.txt old mode 100644 new mode 100755 index 62d7ec8..d7a9aea --- a/CDMATH/tests/examples/WaveSystem1DStaggered_RiemannProblem/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem1DStaggered_RiemannProblem/CMakeLists.txt @@ -3,8 +3,8 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExampleWaveSystem_1DStaggered_RiemannProblem ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystem1DStaggered_RiemannProblem.py) - SET_PROPERTY(TEST ExampleWaveSystem_1DStaggered_RiemannProblem PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_1DStaggered_RiemannProblem APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_1DStaggered_RiemannProblem PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_1DStaggered_RiemannProblem APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem1DStaggered_RiemannProblem/WaveSystem1DStaggered_RiemannProblem.py b/CDMATH/tests/examples/WaveSystem1DStaggered_RiemannProblem/WaveSystem1DStaggered_RiemannProblem.py old mode 100644 new mode 100755 index 9fb4274..363c0e0 --- a/CDMATH/tests/examples/WaveSystem1DStaggered_RiemannProblem/WaveSystem1DStaggered_RiemannProblem.py +++ b/CDMATH/tests/examples/WaveSystem1DStaggered_RiemannProblem/WaveSystem1DStaggered_RiemannProblem.py @@ -15,7 +15,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_Riemann_problem(a,b,nx): - print "Initial data Riemann problem" + print( "Initial data Riemann problem" ) dx = (b - a) / nx #space step x=[a+0.5*dx + i*dx for i in range(nx)] # array of cell center (1D mesh) @@ -129,7 +129,7 @@ def WaveSystemVF(ntmax, tmax, cfl, a,b,nx, output_freq, meshName,scaling): LS_staggered.setSndMember(Un_staggered) Un_staggered=LS_staggered.solve(); if(not LS_staggered.getStatus()): - print "Linear system did not converge for staggered scheme ", LS.getNumberOfIter(), " GMRES iterations" + print( "Linear system did not converge for staggered scheme ", LS.getNumberOfIter(), " GMRES iterations" ) raise ValueError("Pas de convergence du système linéaire"); dUn_staggered-=Un_staggered @@ -145,22 +145,22 @@ def WaveSystemVF(ntmax, tmax, cfl, a,b,nx, output_freq, meshName,scaling): #Sauvegardes if(it==1 or it%output_freq==0 or it>=ntmax or isStationary or time >=tmax): - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Linear system converged in ", LS_staggered.getNumberOfIter(), " GMRES iterations" + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Linear system converged in ", LS_staggered.getNumberOfIter(), " GMRES iterations" ) np.savetxt("WaveSystem"+str(dim)+"DStaggered"+meshName+"_pressure"+str(it)+".txt", pressure_field_staggered, delimiter="\n") np.savetxt("WaveSystem"+str(dim)+"DStaggered"+meshName+"_velocity"+str(it)+".txt", velocity_field_staggered, delimiter="\n") plt.savefig("WaveSystem"+str(dim)+"DStaggered"+meshName+"_pressure"+str(it)+".png") - print - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) + print() + print("-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt)) if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" ) return elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time - print "------------------------------------------------------------------------------------" + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time) + print( "------------------------------------------------------------------------------------") np.savetxt( "WaveSystem"+str(dim)+"DStaggered"+meshName+"_pressure_Stat.txt", pressure_field_staggered, delimiter="\n") np.savetxt( "WaveSystem"+str(dim)+"DStaggered"+meshName+"_velocity_Stat.txt", velocity_field_staggered, delimiter="\n") @@ -168,16 +168,16 @@ def WaveSystemVF(ntmax, tmax, cfl, a,b,nx, output_freq, meshName,scaling): return else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint") return def solve( a,b,nx, meshName, scaling, meshType, cfl): - print "Resolution of the Wave system in dimension 1 on "+str(nx)+ " cells, staggered scheme" - print "Initial data : ", "Riemann problem" - print "Boundary conditions : ", "Neumann" - print "Mesh name : ",meshName , ", ", nx, " cells" + print( "Resolution of the Wave system in dimension 1 on "+str(nx)+ " cells, staggered scheme") + print( "Initial data : ", "Riemann problem") + print( "Boundary conditions : ", "Neumann") + print( "Mesh name : ",meshName , ", ", nx, " cells") # Problem data tmax = 10000. diff --git a/CDMATH/tests/examples/WaveSystem1DUpwind/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem1DUpwind/CMakeLists.txt old mode 100644 new mode 100755 index 0ebd48c..8a4f4e7 --- a/CDMATH/tests/examples/WaveSystem1DUpwind/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem1DUpwind/CMakeLists.txt @@ -2,8 +2,8 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExampleWaveSystem_1DFV_Upwind ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystem1DUpwind.py) - SET_PROPERTY(TEST ExampleWaveSystem_1DFV_Upwind PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_1DFV_Upwind APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_1DFV_Upwind PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_1DFV_Upwind APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem1DUpwind/WaveSystem1DUpwind.py b/CDMATH/tests/examples/WaveSystem1DUpwind/WaveSystem1DUpwind.py old mode 100644 new mode 100755 index 88f9973..1adc62a --- a/CDMATH/tests/examples/WaveSystem1DUpwind/WaveSystem1DUpwind.py +++ b/CDMATH/tests/examples/WaveSystem1DUpwind/WaveSystem1DUpwind.py @@ -143,8 +143,8 @@ def WaveSystem1DVF(ntmax, tmax, cfl, my_mesh, output_freq, resolution): #Sauvegardes if(it%output_freq==0 or it>=ntmax or isStationary or time >=tmax): print("-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt)) - print "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 - print + print( "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ) + print() for k in range(nbCells): pressure_field[k]=U[k,0] @@ -155,15 +155,15 @@ def WaveSystem1DVF(ntmax, tmax, cfl, my_mesh, output_freq, resolution): velocity_field.setTime(time,it); velocity_field.writeCSV("WaveSystem1DUpwind_velocity"); - print("-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt)) - print "|| Un+1 - Un || : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 - print + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "|| Un+1 - Un || : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ) + print() if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" ) raise ValueError("Maximum number of time steps reached : Stationary state not found !!!!!!!") elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time ) for k in range(nbCells): pressure_field[k]=U[k,0] velocity_field[k,0]=U[k,1]/rho0 @@ -174,7 +174,7 @@ def WaveSystem1DVF(ntmax, tmax, cfl, my_mesh, output_freq, resolution): velocity_field.writeCSV("WaveSystem1DUpwind_velocity_Stat"); else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint" ) raise ValueError("Maximum time reached : Stationary state not found !!!!!!!") diff --git a/CDMATH/tests/examples/WaveSystem1DUpwind_RiemannProblem/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem1DUpwind_RiemannProblem/CMakeLists.txt old mode 100644 new mode 100755 index f9fed6d..6abd336 --- a/CDMATH/tests/examples/WaveSystem1DUpwind_RiemannProblem/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem1DUpwind_RiemannProblem/CMakeLists.txt @@ -3,8 +3,8 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExampleWaveSystem_1DUpwind_RiemannProblem ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystem1DUpwind_RiemannProblem.py) - SET_PROPERTY(TEST ExampleWaveSystem_1DUpwind_RiemannProblem PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_1DUpwind_RiemannProblem APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_1DUpwind_RiemannProblem PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_1DUpwind_RiemannProblem APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem1DUpwind_RiemannProblem/WaveSystem1DUpwind_RiemannProblem.py b/CDMATH/tests/examples/WaveSystem1DUpwind_RiemannProblem/WaveSystem1DUpwind_RiemannProblem.py old mode 100644 new mode 100755 index 280c3fd..9ae483b --- a/CDMATH/tests/examples/WaveSystem1DUpwind_RiemannProblem/WaveSystem1DUpwind_RiemannProblem.py +++ b/CDMATH/tests/examples/WaveSystem1DUpwind_RiemannProblem/WaveSystem1DUpwind_RiemannProblem.py @@ -15,7 +15,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_Riemann_problem(a,b,nx): - print "Initial data Riemann problem" + print( "Initial data Riemann problem" ) dx = (b - a) / nx #space step x=[a+0.5*dx + i*dx for i in range(nx)] # array of cell center (1D mesh) @@ -152,7 +152,7 @@ def WaveSystemVF(ntmax, tmax, cfl, a,b,nx, output_freq, meshName,scaling): LS.setSndMember(Un_implicite) Un_implicite=LS.solve(); if(not LS.getStatus()): - print "Linear system did not converge ", LS.getNumberOfIter(), " GMRES iterations" + print( "Linear system did not converge ", LS.getNumberOfIter(), " GMRES iterations" ) raise ValueError("Pas de convergence du système linéaire"); dUn_implicite-=Un_implicite @@ -171,8 +171,8 @@ def WaveSystemVF(ntmax, tmax, cfl, a,b,nx, output_freq, meshName,scaling): #Sauvegardes if(it==1 or it%output_freq==0 or it>=ntmax or isStationary or time >=tmax): - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Linear system converged in ", LS.getNumberOfIter(), " GMRES iterations" + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Linear system converged in ", LS.getNumberOfIter(), " GMRES iterations" ) np.savetxt("WaveSystem" +str(dim)+"DUpwindExplicit"+meshName+"_pressure"+str(it)+".txt", pressure_field , delimiter="\n") np.savetxt("WaveSystem" +str(dim)+"DUpwindExplicit"+meshName+"_velocity"+str(it)+".txt", velocity_field , delimiter="\n") @@ -180,15 +180,15 @@ def WaveSystemVF(ntmax, tmax, cfl, a,b,nx, output_freq, meshName,scaling): np.savetxt("WaveSystem" +str(dim)+"DUpwindImplicit"+meshName+"_velocity"+str(it)+".txt", velocity_field , delimiter="\n") plt.savefig("WaveSystem"+str(dim)+"DUpwind" +meshName+"_pressure"+str(it)+".png") - print - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) + print() + print("-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" ) return elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time - print "------------------------------------------------------------------------------------" + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time ) + print( "------------------------------------------------------------------------------------") np.savetxt( "WaveSystem"+str(dim)+"DUpwind"+meshName+"_pressure_Stat.txt", pressure_field, delimiter="\n") np.savetxt( "WaveSystem"+str(dim)+"DUpwind"+meshName+"_velocity_Stat.txt", velocity_field, delimiter="\n") @@ -196,16 +196,16 @@ def WaveSystemVF(ntmax, tmax, cfl, a,b,nx, output_freq, meshName,scaling): return else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint") return def solve( a,b,nx, meshName, scaling, meshType, cfl): - print "Resolution of the Wave system in dimension 1 on "+str(nx)+ " cells, upwind scheme" - print "Initial data : ", "Riemann problem" - print "Boundary conditions : ", "Neumann" - print "Mesh name : ",meshName , ", ", nx, " cells" + print( "Resolution of the Wave system in dimension 1 on "+str(nx)+ " cells, upwind scheme") + print( "Initial data : ", "Riemann problem") + print( "Boundary conditions : ", "Neumann") + print( "Mesh name : ",meshName , ", ", nx, " cells") # Problem data tmax = 10000. diff --git a/CDMATH/tests/examples/WaveSystem2DUpwind_RiemannProblem/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem2DUpwind_RiemannProblem/CMakeLists.txt old mode 100644 new mode 100755 index 2c5ec61..6e16e23 --- a/CDMATH/tests/examples/WaveSystem2DUpwind_RiemannProblem/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem2DUpwind_RiemannProblem/CMakeLists.txt @@ -18,76 +18,76 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) SET(MESH_FILE ../../ressources/meshSquare.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithBrickWall.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_brickwall ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_brickwall PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_brickwall APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_brickwall PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_brickwall APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithCheckerboardSquares.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_checkerboard ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_checkerboard PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_checkerboard APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_checkerboard PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_checkerboard APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithDeformedQuadrangles.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_deformedQuadrangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_deformedQuadrangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_deformedQuadrangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_deformedQuadrangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_deformedQuadrangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithHexagons.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindExplicit_SQUARE_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(IMPLICIT_SCHEME 1 ) SET(MESH_FILE ../../ressources/meshSquare.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithBrickWall.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_brickwall ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_brickwall PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_brickwall APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_brickwall PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_brickwall APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithCheckerboardSquares.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_checkerboard ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_checkerboard PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_checkerboard APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_checkerboard PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_checkerboard APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithDeformedQuadrangles.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_deformedQuadrangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_deformedQuadrangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_deformedQuadrangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_deformedQuadrangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_deformedQuadrangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../ressources/squareWithHexagons.med ) ADD_TEST(ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DRiemannProblem_UpwindImplicit_SQUARE_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem2DUpwind_RiemannProblem/WaveSystemUpwind.py b/CDMATH/tests/examples/WaveSystem2DUpwind_RiemannProblem/WaveSystemUpwind.py old mode 100644 new mode 100755 index e03f833..964aeff --- a/CDMATH/tests/examples/WaveSystem2DUpwind_RiemannProblem/WaveSystemUpwind.py +++ b/CDMATH/tests/examples/WaveSystem2DUpwind_RiemannProblem/WaveSystemUpwind.py @@ -27,7 +27,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_RiemannProblem(my_mesh): - print "Initial data : Riemann problem" + print( "Initial data : Riemann problem" ) dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -163,7 +163,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, is LS.setSndMember(Un) Un=LS.solve(); if(not LS.getStatus()): - print "Linear system did not converge ", LS.getNumberOfIter(), " GMRES iterations" + print( "Linear system did not converge ", LS.getNumberOfIter(), " GMRES iterations" ) raise ValueError("Pas de convergence du système linéaire"); dUn-=Un @@ -176,7 +176,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, is #Sauvegardes if(it%output_freq==0 or it>=ntmax or isStationary or time >=tmax): - print("-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt)) + print("-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) for k in range(nbCells): pressure_field[k] =Un[k*(dim+1)+0] @@ -192,12 +192,12 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, is velocity_field.writeVTK("WaveSystem"+str(dim)+"DUpwind"+"_isImplicit"+str(isImplicit)+meshName+"_velocity",False); print("-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt)) - print + print() if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint") elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time) pressure_field.setTime(time,0); pressure_field.writeVTK("WaveSystem"+str(dim)+"DUpwind"+"_isImplicit"+str(isImplicit)+meshName+"_pressure_Stat"); @@ -212,15 +212,15 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, is PV_routines.Save_PV_data_to_picture_file("WaveSystem"+str(dim)+"DUpwind"+"_isImplicit"+str(isImplicit)+meshName+"_velocity_Stat"+'_0.vtu',"Velocity",'CELLS',"WaveSystem"+str(dim)+"DUpwind"+meshName+"_velocity_Stat") else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint") def solve(my_mesh,filename,resolution, isImplicit): - print "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() - print "Numerical method : upwind" - print "Initial data : single straight discontinuity (Riemann problem)" - print "Neumann boundary conditions" - print "Mesh name : ",filename , my_mesh.getNumberOfCells(), " cells" + print( "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() ) + print( "Numerical method : upwind") + print( "Initial data : single straight discontinuity (Riemann problem)") + print( "Neumann boundary conditions") + print( "Mesh name : ",filename , my_mesh.getNumberOfCells(), " cells") # Problem data tmax = 1. diff --git a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemCentered/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemCentered/CMakeLists.txt old mode 100644 new mode 100755 index 1b0a86e..d112a48 --- a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemCentered/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemCentered/CMakeLists.txt @@ -19,50 +19,50 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) SET(MESH_FILE ../../../ressources/meshSquare.med ) ADD_TEST(ExampleWaveSystem_2DShock_Centered_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/squareWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DShock_Centered_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/meshCube.med ) ADD_TEST(ExampleWaveSystem_3DShock_Centered_CUBE_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_Centered_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_Centered_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_Centered_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_Centered_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/cubeWithCubes.med ) ADD_TEST(ExampleWaveSystem_3DShock_Centered_CUBE_cubes ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_Centered_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_Centered_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_Centered_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_Centered_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithTriangles.med ) ADD_TEST(ExampleWaveSystem_2DShock_Centered_DISK_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DShock_Centered_DISK_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExampleWaveSystem_2DShock_Centered_DISK_spiderWeb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithHexagons.med ) ADD_TEST(ExampleWaveSystem_2DShock_Centered_DISK_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Centered_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemCentered/WaveSystemCentered.py b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemCentered/WaveSystemCentered.py old mode 100644 new mode 100755 index c78c613..bed8816 --- a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemCentered/WaveSystemCentered.py +++ b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemCentered/WaveSystemCentered.py @@ -28,7 +28,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_shock(my_mesh, isCircle): - print "Initial data : Spherical wave" + print( "Initial data : Spherical wave" ) dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -145,7 +145,7 @@ def computeDivergenceMatrix(my_mesh,nbVoisinsMax,dt): implMat.addValue(j*nbComp,cellAutre*nbComp,Am) implMat.addValue(j*nbComp, j*nbComp,Am*(-1.)) elif(Fk.getGroupName() != "Neumann"):#Nothing to do for Neumann boundary condition - print Fk.getGroupName() + print( Fk.getGroupName() ) raise ValueError("computeFluxes: Unknown boundary condition name"); return implMat @@ -174,7 +174,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): elif(filename.find("disk")>-1 or filename.find("Disk")>-1): pressure_field, velocity_field = initial_conditions_shock(my_mesh,True) else: - print "Mesh name : ", filename + print( "Mesh name : ", filename ) raise ValueError("Mesh name should contain substring square, cube or disk") for k in range(nbCells): @@ -215,7 +215,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): cvgceLS=LS.getStatus(); iterGMRES=LS.getNumberOfIter(); if(not cvgceLS): - print "Linear system did not converge ", iterGMRES, " GMRES iterations" + print( "Linear system did not converge ", iterGMRES, " GMRES iterations" ) raise ValueError("Pas de convergence du système linéaire"); dUn-=Un @@ -228,9 +228,9 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): #Sauvegardes if(it%output_freq==0 or it>=ntmax or isStationary or time >=tmax): - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 - print "Linear system converged in ", iterGMRES, " GMRES iterations" + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 ) + print( "Linear system converged in ", iterGMRES, " GMRES iterations" ) for k in range(nbCells): pressure_field[k]=Un[k*(dim+1)+0] @@ -245,15 +245,15 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): velocity_field.setTime(time,it); velocity_field.writeVTK("WaveSystem"+str(dim)+"DCentered"+meshName+"_velocity",False); - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 - print + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 ) + print() if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" ) elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time - print "------------------------------------------------------------------------------------" + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time ) + print( "------------------------------------------------------------------------------------" ) pressure_field.setTime(time,0); pressure_field.writeVTK("WaveSystem"+str(dim)+"DCentered"+meshName+"_pressure_Stat"); @@ -265,15 +265,15 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): PV_routines.Save_PV_data_to_picture_file("WaveSystem"+str(dim)+"DCentered"+meshName+"_velocity_Stat"+'_0.vtu',"Velocity",'CELLS',"WaveSystem"+str(dim)+"DCentered"+meshName+"_velocity_Stat") else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint" ) def solve(my_mesh,meshName,resolution): - print "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() - print "Numerical method : implicit centered" - print "Initial data : spherical wave" - print "Wall boundary conditions" - print "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells" + print( "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() ) + print( "Numerical method : implicit centered") + print( "Initial data : spherical wave") + print( "Wall boundary conditions") + print( "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells") # Problem data tmax = 1000. diff --git a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemPStag/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemPStag/CMakeLists.txt old mode 100644 new mode 100755 index 7f85fc7..fcfbb10 --- a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemPStag/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemPStag/CMakeLists.txt @@ -19,50 +19,50 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) SET(MESH_FILE ../../../ressources/meshSquare.med ) ADD_TEST(ExampleWaveSystem_2DShock_PStag_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/squareWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DShock_PStag_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/meshCube.med ) ADD_TEST(ExampleWaveSystem_3DShock_PStag_CUBE_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_PStag_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_PStag_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_PStag_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_PStag_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/cubeWithCubes.med ) ADD_TEST(ExampleWaveSystem_3DShock_PStag_CUBE_cubes ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_PStag_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_PStag_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_PStag_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_PStag_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithTriangles.med ) ADD_TEST(ExampleWaveSystem_2DShock_PStag_DISK_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DShock_PStag_DISK_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExampleWaveSystem_2DShock_PStag_DISK_spiderWeb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithHexagons.med ) ADD_TEST(ExampleWaveSystem_2DShock_PStag_DISK_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_PStag_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemPStag/WaveSystemPStag.py b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemPStag/WaveSystemPStag.py old mode 100644 new mode 100755 index d922d0c..593997b --- a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemPStag/WaveSystemPStag.py +++ b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemPStag/WaveSystemPStag.py @@ -28,7 +28,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_shock(my_mesh, isCircle): - print "Initial data : Spherical wave" + print( "Initial data : Spherical wave" ) dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -148,7 +148,7 @@ def computeDivergenceMatrix(my_mesh,nbVoisinsMax,dt): implMat.addValue(j*nbComp,cellAutre*nbComp,Am) implMat.addValue(j*nbComp, j*nbComp,Am*(-1.)) elif(Fk.getGroupName() != "Neumann"):#Nothing to do for Neumann boundary condition - print Fk.getGroupName() + print( Fk.getGroupName() ) raise ValueError("computeFluxes: Unknown boundary condition name"); return implMat @@ -177,7 +177,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): elif(filename.find("disk")>-1 or filename.find("Disk")>-1): pressure_field, velocity_field = initial_conditions_shock(my_mesh,True) else: - print "Mesh name : ", filename + print( "Mesh name : ", filename ) raise ValueError("Mesh name should contain substring square, cube or disk") for k in range(nbCells): @@ -218,7 +218,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): cvgceLS=LS.getStatus(); iterGMRES=LS.getNumberOfIter(); if(not cvgceLS): - print "Linear system did not converge ", iterGMRES, " GMRES iterations" + print( "Linear system did not converge ", iterGMRES, " GMRES iterations" ) raise ValueError("Pas de convergence du système linéaire"); dUn-=Un @@ -231,9 +231,9 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): #Sauvegardes if(it%output_freq==0 or it>=ntmax or isStationary or time >=tmax): - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 - print "Linear system converged in ", iterGMRES, " GMRES iterations" + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 ) + print( "Linear system converged in ", iterGMRES, " GMRES iterations" ) for k in range(nbCells): pressure_field[k]=Un[k*(dim+1)+0] @@ -248,15 +248,15 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): velocity_field.setTime(time,it); velocity_field.writeVTK("WaveSystem"+str(dim)+"DPStag"+meshName+"_velocity",False); - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 - print + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0) + print() if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint") elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time - print "------------------------------------------------------------------------------------" + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time) + print( "------------------------------------------------------------------------------------") pressure_field.setTime(time,0); pressure_field.writeVTK("WaveSystem"+str(dim)+"DPStag"+meshName+"_pressure_Stat"); @@ -268,15 +268,15 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): PV_routines.Save_PV_data_to_picture_file("WaveSystem"+str(dim)+"DPStag"+meshName+"_velocity_Stat"+'_0.vtu',"Velocity",'CELLS',"WaveSystem"+str(dim)+"DPStag"+meshName+"_velocity_Stat") else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint" ) def solve(my_mesh,meshName,resolution): - print "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() - print "Numerical method : implicit pseudo staggered" - print "Initial data : spherical wave" - print "Wall boundary conditions" - print "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells" + print( "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() ) + print( "Numerical method : implicit pseudo staggered" ) + print( "Initial data : spherical wave" ) + print( "Wall boundary conditions" ) + print( "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells" ) # Problem data tmax = 1000. diff --git a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemStaggered/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemStaggered/CMakeLists.txt old mode 100644 new mode 100755 index 836a6b2..31715d7 --- a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemStaggered/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemStaggered/CMakeLists.txt @@ -2,8 +2,8 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExampleWaveSystem_2DShock_Staggered_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemStaggered.py ) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Staggered_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Staggered_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Staggered_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_Staggered_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemStaggered/WaveSystemStaggered.py b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemStaggered/WaveSystemStaggered.py old mode 100644 new mode 100755 index bcdd455..69ef241 --- a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemStaggered/WaveSystemStaggered.py +++ b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemStaggered/WaveSystemStaggered.py @@ -27,7 +27,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_shock(my_mesh, isCircle): - print "Initial data : Spherical wave" + print( "Initial data : Spherical wave") dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -232,7 +232,7 @@ def WaveSystemStaggered(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu elif(meshName.find("disk")>-1 or meshName.find("Disk")>-1): pressure_field, velocity_field = initial_conditions_shock(my_mesh,True) else: - print "Mesh name : ", meshName + print( "Mesh name : ", meshName ) raise ValueError("Mesh name should contain substring square, cube or disk") for k in range(nbCells): @@ -279,7 +279,7 @@ def WaveSystemStaggered(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu cvgceLS=LS.getStatus(); iterGMRES=LS.getNumberOfIter(); if(not cvgceLS): - print "Linear system did not converge ", iterGMRES, " GMRES iterations" + print( "Linear system did not converge ", iterGMRES, " GMRES iterations") raise ValueError("Pas de convergence du système linéaire"); dUn-=Un @@ -296,9 +296,9 @@ def WaveSystemStaggered(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu #Sauvegardes if(it%output_freq==0 or it>=ntmax or isStationary or time >=tmax): - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", max_dp/p0 ,", velocity ", max_dq/rho0 - print "Linear system converged in ", iterGMRES, " GMRES iterations" + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", max_dp/p0 ,", velocity ", max_dq/rho0 ) + print( "Linear system converged in ", iterGMRES, " GMRES iterations" ) for k in range(nbCells): pressure_field[k]=Un[k] @@ -313,15 +313,15 @@ def WaveSystemStaggered(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu velocity_field.setTime(time,it); velocity_field.writeVTK("WaveSystem"+str(dim)+"DStaggered"+meshName+"_velocity",False); - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", max_dp/p0 ,", velocity ", max_dq/rho0 - print + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", max_dp/p0 ,", velocity ", max_dq/rho0 ) + print() if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint") elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time - print "------------------------------------------------------------------------------------" + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time) + print( "------------------------------------------------------------------------------------") pressure_field.setTime(time,0); pressure_field.writeVTK("WaveSystem"+str(dim)+"DStaggered"+meshName+"_pressure_Stat"); @@ -333,15 +333,15 @@ def WaveSystemStaggered(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu PV_routines.Save_PV_data_to_picture_file("WaveSystem"+str(dim)+"DStaggered"+meshName+"_velocity_Stat"+'_0.vtu',"Velocity",'CELLS',"WaveSystem"+str(dim)+"DStaggered"+meshName+"_velocity_Stat") else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint") def solve(my_mesh,meshName,resolution): - print "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() - print "Numerical method : staggered scheme" - print "Initial data : Spherical wave" - print "Periodic boundary conditions" - print "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells" + print( "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() ) + print( "Numerical method : staggered scheme" ) + print( "Initial data : Spherical wave" ) + print( "Periodic boundary conditions" ) + print( "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells" ) # Problem data tmax = 1000. diff --git a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemUpwind/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemUpwind/CMakeLists.txt old mode 100644 new mode 100755 index ba18fac..64d3990 --- a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemUpwind/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemUpwind/CMakeLists.txt @@ -21,100 +21,100 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) SET(MESH_FILE ../../../ressources/meshSquare.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindExplicit_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/squareWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindExplicit_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/meshCube.med ) ADD_TEST(ExampleWaveSystem_3DShock_UpwindExplicit_CUBE_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindExplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindExplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindExplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindExplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/cubeWithCubes.med ) ADD_TEST(ExampleWaveSystem_3DShock_UpwindExplicit_CUBE_cubes ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindExplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindExplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindExplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindExplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithTriangles.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindExplicit_DISK_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindExplicit_DISK_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindExplicit_DISK_spiderWeb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithHexagons.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindExplicit_DISK_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindExplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(IMPLICIT_SCHEME 1 ) SET(MESH_FILE ../../../ressources/meshSquare.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindImplicit_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/squareWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindImplicit_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/meshCube.med ) ADD_TEST(ExampleWaveSystem_3DShock_UpwindImplicit_CUBE_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindImplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindImplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindImplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindImplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/cubeWithCubes.med ) ADD_TEST(ExampleWaveSystem_3DShock_UpwindImplicit_CUBE_cubes ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindImplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindImplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindImplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DShock_UpwindImplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithTriangles.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindImplicit_DISK_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindImplicit_DISK_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindImplicit_DISK_spiderWeb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithHexagons.med ) ADD_TEST(ExampleWaveSystem_2DShock_UpwindImplicit_DISK_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DShock_UpwindImplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemUpwind/WaveSystemUpwind.py b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemUpwind/WaveSystemUpwind.py old mode 100644 new mode 100755 index c9f99cb..8569197 --- a/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemUpwind/WaveSystemUpwind.py +++ b/CDMATH/tests/examples/WaveSystem_Shock/WaveSystemUpwind/WaveSystemUpwind.py @@ -27,7 +27,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_shock(my_mesh, isCircle): - print "Initial data : Spherical wave" + print( "Initial data : Spherical wave" ) dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -142,7 +142,7 @@ def computeDivergenceMatrix(my_mesh,nbVoisinsMax,dt): implMat.addValue(j*nbComp,cellAutre*nbComp,Am) implMat.addValue(j*nbComp, j*nbComp,Am*(-1.)) elif(Fk.getGroupName() != "Neumann"):#Nothing to do for Neumann boundary condition - print Fk.getGroupName() + print( Fk.getGroupName() ) raise ValueError("computeFluxes: Unknown boundary condition name"); return implMat @@ -165,7 +165,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, is elif(filename.find("disk")>-1 or filename.find("Disk")>-1): pressure_field, velocity_field = initial_conditions_shock(my_mesh,True) else: - print "Mesh name : ", filename + print( "Mesh name : ", filename ) raise ValueError("Mesh name should contain substring square, cube or disk") #iteration vectors @@ -209,7 +209,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, is LS.setSndMember(Un) Un=LS.solve(); if(not LS.getStatus()): - print "Linear system did not converge ", LS.getNumberOfIter(), " GMRES iterations" + print( "Linear system did not converge ", LS.getNumberOfIter(), " GMRES iterations" ) raise ValueError("Pas de convergence du système linéaire"); dUn-=Un @@ -238,12 +238,12 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, is velocity_field.writeVTK("WaveSystem"+str(dim)+"DUpwind"+"_isImplicit"+str(isImplicit)+meshName+"_velocity",False); print("-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt)) - print + print() if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint") elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time) pressure_field.setTime(time,0); pressure_field.writeVTK("WaveSystem"+str(dim)+"DUpwind"+"_isImplicit"+str(isImplicit)+meshName+"_pressure_Stat"); @@ -258,15 +258,15 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, is PV_routines.Save_PV_data_to_picture_file("WaveSystem"+str(dim)+"DUpwind"+"_isImplicit"+str(isImplicit)+meshName+"_velocity_Stat"+'_0.vtu',"Velocity",'CELLS',"WaveSystem"+str(dim)+"DUpwind"+meshName+"_velocity_Stat") else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint") def solve(my_mesh,filename,resolution, isImplicit): - print "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() - print "Numerical method : upwind" - print "Initial data : spherical wave" - print "Wall boundary conditions" - print "Mesh name : ",filename , my_mesh.getNumberOfCells(), " cells" + print( "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() ) + print( "Numerical method : upwind" ) + print( "Initial data : spherical wave" ) + print( "Wall boundary conditions" ) + print( "Mesh name : ",filename , my_mesh.getNumberOfCells(), " cells" ) # Problem data tmax = 1. diff --git a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemCentered/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemCentered/CMakeLists.txt old mode 100644 new mode 100755 index 69614cc..8036da7 --- a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemCentered/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemCentered/CMakeLists.txt @@ -19,50 +19,50 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) SET(MESH_FILE ../../../ressources/meshSquare.med ) ADD_TEST(ExampleWaveSystem_2DVortex_Centered_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/squareWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DVortex_Centered_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/meshCube.med ) ADD_TEST(ExampleWaveSystem_3DVortex_Centered_CUBE_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_Centered_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_Centered_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_Centered_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_Centered_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/cubeWithCubes.med ) ADD_TEST(ExampleWaveSystem_3DVortex_Centered_CUBE_cubes ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_Centered_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_Centered_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_Centered_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_Centered_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithTriangles.med ) ADD_TEST(ExampleWaveSystem_2DVortex_Centered_DISK_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DVortex_Centered_DISK_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExampleWaveSystem_2DVortex_Centered_DISK_spiderWeb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithHexagons.med ) ADD_TEST(ExampleWaveSystem_2DVortex_Centered_DISK_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemCentered.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Centered_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemCentered/WaveSystemCentered.py b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemCentered/WaveSystemCentered.py old mode 100644 new mode 100755 index e7cd386..76c67b1 --- a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemCentered/WaveSystemCentered.py +++ b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemCentered/WaveSystemCentered.py @@ -28,7 +28,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_disk_vortex(my_mesh): - print "Disk vortex initial data" + print( "Disk vortex initial data") dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -51,7 +51,7 @@ def initial_conditions_disk_vortex(my_mesh): return pressure_field, velocity_field def initial_conditions_square_vortex(my_mesh): - print "Initial data : Square vortex (Constant pressure, divergence free velocity)" + print( "Initial data : Square vortex (Constant pressure, divergence free velocity)") dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -148,7 +148,7 @@ def computeDivergenceMatrix(my_mesh,nbVoisinsMax,dt): implMat.addValue(j*nbComp,cellAutre*nbComp,Am) implMat.addValue(j*nbComp, j*nbComp,Am*(-1.)) elif(Fk.getGroupName() != "Neumann"):#Nothing to do for Neumann boundary condition - print Fk.getGroupName() + print( Fk.getGroupName() ) raise ValueError("computeFluxes: Unknown boundary condition name"); return implMat @@ -177,7 +177,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): elif(filename.find("disk")>-1 or filename.find("Disk")>-1): pressure_field, velocity_field = initial_conditions_disk_vortex(my_mesh) else: - print "Mesh name : ", filename + print( "Mesh name : ", filename) raise ValueError("Mesh name should contain substring square, cube or disk") for k in range(nbCells): @@ -217,7 +217,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): cvgceLS=LS.getStatus(); iterGMRES=LS.getNumberOfIter(); if(not cvgceLS): - print "Linear system did not converge ", iterGMRES, " GMRES iterations" + print( "Linear system did not converge ", iterGMRES, " GMRES iterations") raise ValueError("Pas de convergence du système linéaire"); dUn-=Un @@ -230,9 +230,9 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): #Sauvegardes if(it%output_freq==0 or it>=ntmax or isStationary or time >=tmax): - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 - print "Linear system converged in ", iterGMRES, " GMRES iterations" + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 ) + print( "Linear system converged in ", iterGMRES, " GMRES iterations") for k in range(nbCells): pressure_field[k]=Un[k*(dim+1)+0] @@ -247,15 +247,15 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): velocity_field.setTime(time,it); velocity_field.writeVTK("WaveSystem"+str(dim)+"DCentered"+meshName+"_velocity",False); - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 - print + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 ) + print() if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint") elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time - print "------------------------------------------------------------------------------------" + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time) + print( "------------------------------------------------------------------------------------") pressure_field.setTime(time,0); pressure_field.writeVTK("WaveSystem"+str(dim)+"DCentered"+meshName+"_pressure_Stat"); @@ -267,15 +267,15 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): PV_routines.Save_PV_data_to_picture_file("WaveSystem"+str(dim)+"DCentered"+meshName+"_velocity_Stat"+'_0.vtu',"Velocity",'CELLS',"WaveSystem"+str(dim)+"DCentered"+meshName+"_velocity_Stat") else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint") def solve(my_mesh,meshName,resolution): - print "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() - print "Numerical method : implicit centered" - print "Initial data : stationary solution (constant pressure, divergence free velocity)" - print "Wall boundary conditions" - print "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells" + print( "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() ) + print( "Numerical method : implicit centered" ) + print( "Initial data : stationary solution (constant pressure, divergence free velocity)" ) + print( "Wall boundary conditions" ) + print( "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells" ) # Problem data tmax = 1000. diff --git a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemPStag/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemPStag/CMakeLists.txt old mode 100644 new mode 100755 index f835093..356f1e9 --- a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemPStag/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemPStag/CMakeLists.txt @@ -19,50 +19,50 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) SET(MESH_FILE ../../../ressources/meshSquare.med ) ADD_TEST(ExampleWaveSystem_2DVortex_PStag_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/squareWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DVortex_PStag_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/meshCube.med ) ADD_TEST(ExampleWaveSystem_3DVortex_PStag_CUBE_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_PStag_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_PStag_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_PStag_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_PStag_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/cubeWithCubes.med ) ADD_TEST(ExampleWaveSystem_3DVortex_PStag_CUBE_cubes ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_PStag_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_PStag_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_PStag_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_PStag_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithTriangles.med ) ADD_TEST(ExampleWaveSystem_2DVortex_PStag_DISK_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DVortex_PStag_DISK_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExampleWaveSystem_2DVortex_PStag_DISK_spiderWeb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithHexagons.med ) ADD_TEST(ExampleWaveSystem_2DVortex_PStag_DISK_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemPStag.py ${MESH_FILE}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_PStag_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemPStag/WaveSystemPStag.py b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemPStag/WaveSystemPStag.py old mode 100644 new mode 100755 index 8fe8730..3189433 --- a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemPStag/WaveSystemPStag.py +++ b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemPStag/WaveSystemPStag.py @@ -28,7 +28,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_disk_vortex(my_mesh): - print "Disk vortex initial data" + print( "Disk vortex initial data" ) dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -51,7 +51,7 @@ def initial_conditions_disk_vortex(my_mesh): return pressure_field, velocity_field def initial_conditions_square_vortex(my_mesh): - print "Initial data : Square vortex (Constant pressure, divergence free velocity)" + print( "Initial data : Square vortex (Constant pressure, divergence free velocity)" ) dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -151,7 +151,7 @@ def computeDivergenceMatrix(my_mesh,nbVoisinsMax,dt): implMat.addValue(j*nbComp,cellAutre*nbComp,Am) implMat.addValue(j*nbComp, j*nbComp,Am*(-1.)) elif(Fk.getGroupName() != "Neumann"):#Nothing to do for Neumann boundary condition - print Fk.getGroupName() + print( Fk.getGroupName() ) raise ValueError("computeFluxes: Unknown boundary condition name"); return implMat @@ -180,7 +180,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): elif(filename.find("disk")>-1 or filename.find("Disk")>-1): pressure_field, velocity_field = initial_conditions_disk_vortex(my_mesh) else: - print "Mesh name : ", filename + print( "Mesh name : ", filename) raise ValueError("Mesh name should contain substring square, cube or disk") for k in range(nbCells): @@ -220,7 +220,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): cvgceLS=LS.getStatus(); iterGMRES=LS.getNumberOfIter(); if(not cvgceLS): - print "Linear system did not converge ", iterGMRES, " GMRES iterations" + print( "Linear system did not converge ", iterGMRES, " GMRES iterations") raise ValueError("Pas de convergence du système linéaire"); dUn-=Un @@ -233,9 +233,9 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): #Sauvegardes if(it%output_freq==0 or it>=ntmax or isStationary or time >=tmax): - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 - print "Linear system converged in ", iterGMRES, " GMRES iterations" + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 ) + print( "Linear system converged in ", iterGMRES, " GMRES iterations" ) for k in range(nbCells): pressure_field[k]=Un[k*(dim+1)+0] @@ -250,15 +250,15 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): velocity_field.setTime(time,it); velocity_field.writeVTK("WaveSystem"+str(dim)+"DPStag"+meshName+"_velocity",False); - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 - print + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", maxVector[0]/p0 ,", velocity x", maxVector[1]/rho0 ,", velocity y", maxVector[2]/rho0 ) + print() if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint") elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time - print "------------------------------------------------------------------------------------" + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time) + print( "------------------------------------------------------------------------------------") pressure_field.setTime(time,0); pressure_field.writeVTK("WaveSystem"+str(dim)+"DPStag"+meshName+"_pressure_Stat"); @@ -270,15 +270,15 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution): PV_routines.Save_PV_data_to_picture_file("WaveSystem"+str(dim)+"DPStag"+meshName+"_velocity_Stat"+'_0.vtu',"Velocity",'CELLS',"WaveSystem"+str(dim)+"DPStag"+meshName+"_velocity_Stat") else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint") def solve(my_mesh,meshName,resolution): - print "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() - print "Numerical method : implicit pseudo staggered" - print "Initial data : stationary solution (constant pressure, divergence free velocity)" - print "Wall boundary conditions" - print "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells" + print( "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension()) + print( "Numerical method : implicit pseudo staggered") + print( "Initial data : stationary solution (constant pressure, divergence free velocity)") + print( "Wall boundary conditions") + print( "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells" ) # Problem data tmax = 1000. diff --git a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemStaggered/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemStaggered/CMakeLists.txt old mode 100644 new mode 100755 index c662687..e227590 --- a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemStaggered/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemStaggered/CMakeLists.txt @@ -2,8 +2,8 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) ADD_TEST(ExampleWaveSystem_2DVortex_Staggered_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemStaggered.py ) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Staggered_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Staggered_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Staggered_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_Staggered_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemStaggered/WaveSystemStaggered.py b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemStaggered/WaveSystemStaggered.py old mode 100644 new mode 100755 index cedc21c..6318a50 --- a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemStaggered/WaveSystemStaggered.py +++ b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemStaggered/WaveSystemStaggered.py @@ -27,7 +27,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_square_vortex(my_mesh): - print "Initial data : Square vortex (Constant pressure, divergence free velocity)" + print( "Initial data : Square vortex (Constant pressure, divergence free velocity)" ) dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -251,7 +251,7 @@ def WaveSystemStaggered(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu cvgceLS=LS.getStatus(); iterGMRES=LS.getNumberOfIter(); if(not cvgceLS): - print "Linear system did not converge ", iterGMRES, " GMRES iterations" + print( "Linear system did not converge ", iterGMRES, " GMRES iterations") raise ValueError("Pas de convergence du système linéaire"); dUn-=Un @@ -268,9 +268,9 @@ def WaveSystemStaggered(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu #Sauvegardes if(it%output_freq==0 or it>=ntmax or isStationary or time >=tmax): - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", max_dp/p0 ,", velocity ", max_dq/rho0 - print "Linear system converged in ", iterGMRES, " GMRES iterations" + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", max_dp/p0 ,", velocity ", max_dq/rho0) + print( "Linear system converged in ", iterGMRES, " GMRES iterations") for k in range(nbCells): pressure_field[k]=Un[k] @@ -285,15 +285,15 @@ def WaveSystemStaggered(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu velocity_field.setTime(time,it); velocity_field.writeVTK("WaveSystem"+str(dim)+"DStaggered"+meshName+"_velocity",False); - print"-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) - print "Variation temporelle relative : pressure ", max_dp/p0 ,", velocity ", max_dq/rho0 - print + print( "-- Iter: " + str(it) + ", Time: " + str(time) + ", dt: " + str(dt) ) + print( "Variation temporelle relative : pressure ", max_dp/p0 ,", velocity ", max_dq/rho0 ) + print() if(it>=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint") elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time - print "------------------------------------------------------------------------------------" + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time) + print( "------------------------------------------------------------------------------------") pressure_field.setTime(time,0); pressure_field.writeVTK("WaveSystem"+str(dim)+"DStaggered"+meshName+"_pressure_Stat"); @@ -305,15 +305,15 @@ def WaveSystemStaggered(ntmax, tmax, cfl, my_mesh, output_freq, meshName, resolu PV_routines.Save_PV_data_to_picture_file("WaveSystem"+str(dim)+"DStaggered"+meshName+"_velocity_Stat"+'_0.vtu',"Velocity",'CELLS',"WaveSystem"+str(dim)+"DStaggered"+meshName+"_velocity_Stat") else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint" ) def solve(my_mesh,meshName,resolution): - print "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() - print "Numerical method : staggered scheme" - print "Initial data : stationary solution (constant pressure, divergence free velocity)" - print "Periodic boundary conditions" - print "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells" + print( "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension()) + print( "Numerical method : staggered scheme") + print( "Initial data : stationary solution (constant pressure, divergence free velocity)") + print( "Periodic boundary conditions") + print( "Mesh name : ",meshName , my_mesh.getNumberOfCells(), " cells") # Problem data tmax = 1000. diff --git a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemUpwind/CMakeLists.txt b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemUpwind/CMakeLists.txt old mode 100644 new mode 100755 index 5f37d66..bb3a7eb --- a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemUpwind/CMakeLists.txt +++ b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemUpwind/CMakeLists.txt @@ -21,100 +21,100 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) SET(MESH_FILE ../../../ressources/meshSquare.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindExplicit_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/squareWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindExplicit_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/meshCube.med ) ADD_TEST(ExampleWaveSystem_3DVortex_UpwindExplicit_CUBE_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindExplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindExplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindExplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindExplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/cubeWithCubes.med ) ADD_TEST(ExampleWaveSystem_3DVortex_UpwindExplicit_CUBE_cubes ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindExplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindExplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindExplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindExplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithTriangles.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_spiderWeb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithHexagons.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindExplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(IMPLICIT_SCHEME 0 ) SET(MESH_FILE ../../../ressources/meshSquare.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindImplicit_SQUARE_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_SQUARE_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_SQUARE_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/squareWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindImplicit_SQUARE_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_SQUARE_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_SQUARE_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/meshCube.med ) ADD_TEST(ExampleWaveSystem_3DVortex_UpwindImplicit_CUBE_tetrahedra ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindImplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindImplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindImplicit_CUBE_tetrahedra PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindImplicit_CUBE_tetrahedra APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/cubeWithCubes.med ) ADD_TEST(ExampleWaveSystem_3DVortex_UpwindImplicit_CUBE_cubes ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindImplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindImplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindImplicit_CUBE_cubes PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_3DVortex_UpwindImplicit_CUBE_cubes APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithTriangles.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_triangles ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_triangles PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_triangles APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSquares.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_squares ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_squares PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_squares APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithSpiderWeb.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_spiderWeb ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_spiderWeb PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_spiderWeb APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") SET(MESH_FILE ../../../ressources/diskWithHexagons.med ) ADD_TEST(ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_hexagons ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/WaveSystemUpwind.py ${MESH_FILE} ${IMPLICIT_SCHEME}) - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}:${CDMATH_BINARY_DIR}/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}:${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_hexagons PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST ExampleWaveSystem_2DVortex_UpwindImplicit_DISK_hexagons APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) diff --git a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemUpwind/WaveSystemUpwind.py b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemUpwind/WaveSystemUpwind.py old mode 100644 new mode 100755 index 83a5cfe..7cff68b --- a/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemUpwind/WaveSystemUpwind.py +++ b/CDMATH/tests/examples/WaveSystem_Stationary/WaveSystemUpwind/WaveSystemUpwind.py @@ -27,7 +27,7 @@ rho0=p0/c0*c0#reference density precision=1e-5 def initial_conditions_disk_vortex(my_mesh): - print "Disk vortex initial data" + print( "Disk vortex initial data") dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -50,7 +50,7 @@ def initial_conditions_disk_vortex(my_mesh): return pressure_field, velocity_field def initial_conditions_square_vortex(my_mesh): - print "Initial data : Square vortex (Constant pressure, divergence free velocity)" + print( "Initial data : Square vortex (Constant pressure, divergence free velocity)" ) dim = my_mesh.getMeshDimension() nbCells = my_mesh.getNumberOfCells() @@ -145,7 +145,7 @@ def computeDivergenceMatrix(my_mesh,nbVoisinsMax,dt): implMat.addValue(j*nbComp,cellAutre*nbComp,Am) implMat.addValue(j*nbComp, j*nbComp,Am*(-1.)) elif(Fk.getGroupName() != "Neumann"):#Nothing to do for Neumann boundary condition - print Fk.getGroupName() + print( Fk.getGroupName() ) raise ValueError("computeFluxes: Unknown boundary condition name"); return implMat @@ -168,7 +168,7 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, is elif(filename.find("disk")>-1 or filename.find("Disk")>-1): pressure_field, velocity_field = initial_conditions_disk_vortex(my_mesh) else: - print "Mesh name : ", filename + print( "Mesh name : ", filename) raise ValueError("Mesh name should contain substring square, cube or disk") #iteration vectors @@ -204,7 +204,6 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, is print("Starting computation of the linear wave system with an UPWIND scheme …") - print "coucou2" # Starting time loop while (it=ntmax): - print "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint" + print( "Nombre de pas de temps maximum ntmax= ", ntmax, " atteint") elif(isStationary): - print "Régime stationnaire atteint au pas de temps ", it, ", t= ", time + print( "Régime stationnaire atteint au pas de temps ", it, ", t= ", time) pressure_field.setTime(time,0); pressure_field.writeVTK("WaveSystem"+str(dim)+"DUpwind"+meshName+"_pressure_Stat"); @@ -261,15 +260,15 @@ def WaveSystemVF(ntmax, tmax, cfl, my_mesh, output_freq, filename,resolution, is PV_routines.Save_PV_data_to_picture_file("WaveSystem"+str(dim)+"DUpwind"+meshName+"_velocity_Stat"+'_0.vtu',"Velocity",'CELLS',"WaveSystem"+str(dim)+"DUpwind"+meshName+"_velocity_Stat") else: - print "Temps maximum Tmax= ", tmax, " atteint" + print( "Temps maximum Tmax= ", tmax, " atteint") def solve(my_mesh,filename,resolution, isImplicit): - print "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension() - print "Numerical method : upwind" - print "Initial data : stationary solution (constant pressure, divergence free velocity)" - print "Wall boundary conditions" - print "Mesh name : ",filename , my_mesh.getNumberOfCells(), " cells" + print( "Resolution of the Wave system in dimension ", my_mesh.getSpaceDimension()) + print( "Numerical method : upwind") + print( "Initial data : stationary solution (constant pressure, divergence free velocity)") + print( "Wall boundary conditions") + print( "Mesh name : ",filename , my_mesh.getNumberOfCells(), " cells") # Problem data tmax = 1. diff --git a/CDMATH/tests/ressources/CMakeLists.txt b/CDMATH/tests/ressources/CMakeLists.txt old mode 100644 new mode 100755 index f9387fc..304bbfe --- a/CDMATH/tests/ressources/CMakeLists.txt +++ b/CDMATH/tests/ressources/CMakeLists.txt @@ -4,6 +4,6 @@ SET(MESH_MED2 file(COPY ${MESH_MED2} DESTINATION ${CMAKE_BINARY_DIR}/tests/ressources) -install(DIRECTORY ${MESH_MED2} DESTINATION share/meshes) +install(DIRECTORY ${MESH_MED2} DESTINATION meshes) diff --git a/CDMATH/tests/swig/BoySurface/CMakeLists.txt b/CDMATH/tests/swig/BoySurface/CMakeLists.txt old mode 100644 new mode 100755 index fc409d5..6269a66 --- a/CDMATH/tests/swig/BoySurface/CMakeLists.txt +++ b/CDMATH/tests/swig/BoySurface/CMakeLists.txt @@ -1,9 +1,9 @@ if (CDMATH_WITH_PYTHON AND CDMATH_WITH_POSTPRO)#The environment is probably too rich for the current test contain ADD_TEST(Test_Boys_Surface ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/BoysSurfaceVTK.py) - SET_PROPERTY(TEST Test_Boys_Surface PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST Test_Boys_Surface APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST Test_Boys_Surface PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST Test_Boys_Surface APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") endif () -INSTALL(FILES BoysSurfaceVTK.py VTKnewReader.py DESTINATION bin/tests/BoysSurface) +INSTALL(FILES BoysSurfaceVTK.py VTKnewReader.py DESTINATION bin/BoysSurface) diff --git a/CDMATH/tests/swig/CMakeLists.txt b/CDMATH/tests/swig/CMakeLists.txt old mode 100644 new mode 100755 index 94c4de4..ccaaeef --- a/CDMATH/tests/swig/CMakeLists.txt +++ b/CDMATH/tests/swig/CMakeLists.txt @@ -8,36 +8,31 @@ SET(MESH_MED file(COPY ${MESH_MED} DESTINATION ${CMAKE_BINARY_DIR}/tests/swig) ADD_TEST(TestsCDMATHSwig ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/mainTests.py) -# Some users have to set environment variables manually before launching tests. -# On Ubuntu: -# export LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib/:${PETSC_DIR}/${PETSC_ARCH}/lib -# export PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath - if (CDMATH_WITH_PETSC) ADD_TEST(TestsLinearSolverSwig ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/linearSolverTests.py) - SET_PROPERTY(TEST TestsLinearSolverSwig PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib") - SET_PROPERTY(TEST TestsLinearSolverSwig APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}") - INSTALL(FILES linearSolverTests.py DESTINATION bin/tests) + SET_PROPERTY(TEST TestsLinearSolverSwig PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}") + SET_PROPERTY(TEST TestsLinearSolverSwig APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}") + INSTALL(FILES linearSolverTests.py DESTINATION tests/unit_tests) - SET_PROPERTY(TEST TestsCDMATHSwig PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib") + SET_PROPERTY(TEST TestsCDMATHSwig PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}") else (CDMATH_WITH_PETSC) - SET_PROPERTY(TEST TestsCDMATHSwig PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${HDF5_ROOT_DIR}/lib") + SET_PROPERTY(TEST TestsCDMATHSwig PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${HDF5_ROOT_DIR}/lib") endif (CDMATH_WITH_PETSC) -SET_PROPERTY(TEST TestsCDMATHSwig APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}") +SET_PROPERTY(TEST TestsCDMATHSwig APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}") if (CDMATH_WITH_PYTHON AND CDMATH_WITH_POSTPRO) ADD_TEST(Tests_VTK_routines ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/test_VTK_routines.py) - SET_PROPERTY(TEST Tests_VTK_routines PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST Tests_VTK_routines APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST Tests_VTK_routines PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST Tests_VTK_routines APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") ADD_TEST(Tests_PV_routines ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/test_PV_routines.py) - SET_PROPERTY(TEST Tests_PV_routines PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${CMAKE_INSTALL_PREFIX}/lib:${CMAKE_INSTALL_PREFIX}/lib/medcoupling:${CMAKE_INSTALL_PREFIX}/lib/med:${PETSC_DIR}/${PETSC_ARCH}/lib:${HDF5_ROOT_DIR}/lib:${PV_LIB_DIR}") - SET_PROPERTY(TEST Tests_PV_routines APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${CMAKE_INSTALL_PREFIX}/lib/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath:${CMAKE_INSTALL_PREFIX}/bin/cdmath/postprocessing:${CMAKE_INSTALL_PREFIX}/${MEDCOUPLING_INSTALL_PYTHON}:${PV_PYTHON_DIR}") + SET_PROPERTY(TEST Tests_PV_routines PROPERTY ENVIRONMENT "LD_LIBRARY_PATH=${TESTS_LIBRARY_PATH}:${PV_LIB_DIR}") + SET_PROPERTY(TEST Tests_PV_routines APPEND PROPERTY ENVIRONMENT "PYTHONPATH=${TESTS_PYTHON_PATH}:${PV_PYTHON_DIR}") add_subdirectory (BoySurface) endif () -INSTALL(FILES ${MESH_MED} mainTests.py test_VTK_routines.py test_PV_routines.py DESTINATION bin/tests) +INSTALL(FILES ${MESH_MED} mainTests.py test_VTK_routines.py test_PV_routines.py DESTINATION tests/unit_tests) diff --git a/CDMATH/tests/swig/mainTests.py b/CDMATH/tests/swig/mainTests.py old mode 100644 new mode 100755 index 3870e5e..9bad2be --- a/CDMATH/tests/swig/mainTests.py +++ b/CDMATH/tests/swig/mainTests.py @@ -304,11 +304,11 @@ class TestsCDMATHSwig(unittest.TestCase): self.assertTrue(0.0 == conc13[i]) conc15 = conc1 * 2. - conc16 = conc1 / 3. + conc16 = conc1 * 0.3 for i in range(conc15.getNumberOfElements()): self.assertTrue(conc1[i] * 2. == conc15[i]) - self.assertTrue(conc1[i] / 3. == conc16[i]) + self.assertTrue(conc1[i] * 0.3 == conc16[i]) MF = Mesh(0.0, 1.0, 3, 0., 1., 3) concF1 = Field("CONCENTRATION", FACES, MF) @@ -543,7 +543,7 @@ class TestsCDMATHSwig(unittest.TestCase): M23 = Mesh("meshSquare.med") self.assertTrue(len(M23.getNameOfFaceGroups()) == 5) - print M23.getNameOfFaceGroups() + print( M23.getNameOfFaceGroups() ) self.assertTrue(M23.getNameOfFaceGroups()[3] == "Bottom") self.assertTrue(M23.getNameOfFaceGroups()[2] == "Left") self.assertTrue(M23.getNameOfFaceGroups()[1] == "Right") @@ -631,7 +631,7 @@ class TestsCDMATHSwig(unittest.TestCase): self.assertTrue(9.0 == A22[1, 0]) self.assertTrue(12.0 == A22[1, 1]) - A22 = A / 2 + A22 = A *0.5 self.assertTrue(0.5 == A22[0, 0]) self.assertTrue(1.0 == A22[0, 1]) self.assertTrue(1.5 == A22[1, 0]) @@ -752,7 +752,7 @@ class TestsCDMATHSwig(unittest.TestCase): self.assertTrue(2.0 == E[0]) self.assertTrue(4.0 == E[1]) - E /= 2 + E *= 0.5 self.assertTrue(1.0 == E[0]) self.assertTrue(2.0 == E[1]) @@ -760,7 +760,7 @@ class TestsCDMATHSwig(unittest.TestCase): self.assertTrue(2.0, E[0]) self.assertTrue(4.0, E[1]) - F = A / 2 + F = A * 0.5 self.assertTrue(A[0] / 2 == F[0]) self.assertTrue(A[1] / 2 == F[1]) @@ -770,18 +770,18 @@ class TestsCDMATHSwig(unittest.TestCase): a = A[0] self.assertTrue(A[0] == a) -# v3=Vector(4); -# v3[0]=1; -# v3[1]=2; -# v3[2]=3; -# v3[3]=4; -# -# v4=Vector(3); -# v4[0]=1.; -# v4[1]=2.; -# v4[2]=3.; -# -# v5=v3^v4; +# v3=Vector(4); +# v3[0]=1; +# v3[1]=2; +# v3[2]=3; +# v3[3]=4; + +# v4=Vector(3); +# v4[0]=1.; +# v4[1]=2.; +# v4[2]=3.; + +# v5=v3^v4; # # self.assertTrue( 1.==v5[0,0] ); # self.assertTrue( 2.==v5[0,1] ); diff --git a/CDMATH/tests/swig/test_PV_routines.py b/CDMATH/tests/swig/test_PV_routines.py old mode 100644 new mode 100755 index 9c73305..10adad2 --- a/CDMATH/tests/swig/test_PV_routines.py +++ b/CDMATH/tests/swig/test_PV_routines.py @@ -70,13 +70,13 @@ resolution=100 outputFileName="Extract_PV_over_line_"+fileNameVTK1+".csv" Extract_PV_data_over_line_to_txt_file('2D_structured_cell_field_0.vtu', outputFileName, point1, point2, resolution) -print "Extract_VTK_over_line ok" +print( "Extract_VTK_over_line ok") point=[0.5,0.5,0] normal=[1,1,0] outputFileName="Slice_PV_data_to_txt_file_"+fileNameVTK3+".csv" Slice_PV_data_to_txt_file(fileNameVTK3+'_0.vtu', outputFileName, point, normal,resolution ) -print "Slice_PV_data_to_txt_file ok" +print( "Slice_PV_data_to_txt_file ok") #outputFileName="Slice_field_data_to_txt_file"+fileNameVTK4+".csv" #Slice_PV_field_data_to_txt_file(field4, outputFileName, point, normal,resolution) @@ -85,25 +85,25 @@ print "Slice_PV_data_to_txt_file ok" outputFileName="Clip_PV_data_to_VTK_"+fileNameVTK5 inputFileName="Clip_VTK_data_to_VTK_"+fileNameVTK5 Save_PV_data_to_picture_file(inputFileName+'_0.vtu',fieldName5,'CELLS',outputFileName) -print "Save_PV_Clip_data_to_picture_file ok" +print( "Save_PV_Clip_data_to_picture_file ok") outputFileName="Slice_PV_data_to_VTK_"+fileNameVTK5 inputFileName="Slice_VTK_data_to_VTK_"+fileNameVTK5 Save_PV_data_to_picture_file(inputFileName+'_0.vtu',fieldName5,'CELLS',outputFileName) -print "Save_PV_Slice_data_to_picture_file ok" +print( "Save_PV_Slice_data_to_picture_file ok") outputFileName="Save_PV_data_to_picture_file_"+fileNameVTK2 Save_PV_data_to_picture_file(fileNameVTK2+'_0.vtu',fieldName2,'NODES',outputFileName) -print "Save_PV_data_to_picture_file " + fileNameVTK2+ " ok" +print( "Save_PV_data_to_picture_file " + fileNameVTK2+ " ok") outputFileName="Save_PV_data_to_picture_file_"+fileNameVTK3 Save_PV_data_to_picture_file(fileNameVTK3+'_0.vtu',fieldName3,'NODES',outputFileName) -print "Save_PV_data_to_picture_file " + fileNameVTK3+ " ok" +print( "Save_PV_data_to_picture_file " + fileNameVTK3+ " ok") outputFileName="Save_PV_data_to_picture_file_"+fileNameVTK4 Save_PV_data_to_picture_file(fileNameVTK4+'_0.vtu',fieldName4,'NODES',outputFileName) -print "Save_PV_data_to_picture_file " + fileNameVTK4+ " ok" +print( "Save_PV_data_to_picture_file " + fileNameVTK4+ " ok") outputFileName="Save_PV_data_to_picture_file_"+fileNameVTK5 Save_PV_data_to_picture_file(fileNameVTK5+'_0.vtu',fieldName5,'CELLS',outputFileName) -print "Save_PV_data_to_picture_file " + fileNameVTK5+ " ok" +print( "Save_PV_data_to_picture_file " + fileNameVTK5+ " ok") diff --git a/CDMATH/tests/swig/test_VTK_routines.py b/CDMATH/tests/swig/test_VTK_routines.py old mode 100644 new mode 100755 index d7debc7..6be8e3c --- a/CDMATH/tests/swig/test_VTK_routines.py +++ b/CDMATH/tests/swig/test_VTK_routines.py @@ -67,40 +67,40 @@ resolution=100 outputFileName="Extract_VTK_over_line_"+fileNameVTK1+".csv" Extract_VTK_data_over_line_to_txt_file('2D_structured_cell_field_0.vtu', outputFileName, point1, point2, resolution) -print "Extract_VTK_over_line ok" +print( "Extract_VTK_over_line ok") outputFileName="Extract_field_over_line_"+fileNameVTK2+".csv" Extract_field_data_over_line_to_txt_file(field2, point1, point2, resolution, outputFileName) -print "Extract_field_over_line ok" +print( "Extract_field_over_line ok") point=[0.5,0.5,0.5] normal=[-0.5,-0.5,-0.5] outputFileName="Slice_VTK_data_to_txt_file_"+fileNameVTK3+".csv" Slice_VTK_data_to_txt_file(fileNameVTK3+'_0.vtu', outputFileName, point, normal,resolution ) -print "Slice_VTK_data_to_txt_file ok" +print( "Slice_VTK_data_to_txt_file ok") outputFileName="Slice_field_data_to_txt_file_"+fileNameVTK4+".csv" Slice_field_data_to_txt_file(field4, outputFileName, point, normal,resolution) -print "Slice_field_data_to_txt_file ok" +print( "Slice_field_data_to_txt_file ok") outputFileName="Slice_VTK_data_to_VTK_"+fileNameVTK5+'_0.vtu' Slice_VTK_data_to_VTK(fileNameVTK5+'_0.vtu',outputFileName,point, normal,resolution ) -print "Slice_VTK_data_to_VTK ok" +print( "Slice_VTK_data_to_VTK ok") outputFileName="Clip_VTK_data_to_VTK_"+fileNameVTK5+'_0.vtu' Clip_VTK_data_to_VTK(fileNameVTK5+'_0.vtu',outputFileName,point, normal,resolution ) -print "Clip_VTK_data_to_VTK ok" +print( "Clip_VTK_data_to_VTK ok") inputFileName="Slice_VTK_data_to_VTK_"+fileNameVTK5 outputFileName="Save_Slice_VTK_data_to_VTK_"+fileNameVTK5 Save_VTK_data_to_picture_file(inputFileName+'_0.vtu',"testfield5","CELLS",outputFileName) -print "Save_VTK_Slice_data_to_picture_file ok" +print( "Save_VTK_Slice_data_to_picture_file ok") inputFileName="Clip_VTK_data_to_VTK_"+fileNameVTK5 outputFileName="Save_Clip_VTK_data_to_VTK_"+fileNameVTK5 Save_VTK_data_to_picture_file(inputFileName+'_0.vtu',"testfield5","CELLS",outputFileName) -print "Save_VTK_Clip_data_to_picture_file ok" +print( "Save_VTK_Clip_data_to_picture_file ok") outputFileName="Save_VTK_data_to_picture_file_"+fileNameVTK5 Save_VTK_data_to_picture_file(fileNameVTK5+'_0.vtu',"testfield5","CELLS",outputFileName) -print "Save_VTK_data_to_picture_file ok" +print( "Save_VTK_data_to_picture_file ok") diff --git a/CDMATH/tests/swig/test_analyticalFunction_discretizer.py b/CDMATH/tests/swig/test_analyticalFunction_discretizer.py old mode 100644 new mode 100755 index 34d5b0e..79858f7 --- a/CDMATH/tests/swig/test_analyticalFunction_discretizer.py +++ b/CDMATH/tests/swig/test_analyticalFunction_discretizer.py @@ -23,8 +23,8 @@ solution = anSol.analyticalFunction_discretizer(mesh, output_dir="./tmp", print(solution.var_list) for varName in solution.var_dict: - print varName + "=", solution.var_eval[varName] + print( varName + "=", solution.var_eval[varName]) solution.save_all_variables() -print "done" +print( "done" ) diff --git a/CDMATH/tests/validation/CMakeLists.txt b/CDMATH/tests/validation/CMakeLists.txt old mode 100644 new mode 100755 index eeb0c27..7afdccf --- a/CDMATH/tests/validation/CMakeLists.txt +++ b/CDMATH/tests/validation/CMakeLists.txt @@ -109,7 +109,7 @@ IF (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) install( DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/ - DESTINATION share/validation/${dir} + DESTINATION bin/validation/${dir} FILES_MATCHING PATTERN "*.py" PATTERN "*.med" PATTERN "*_0.vtu" @@ -120,13 +120,13 @@ IF (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) if(NOT ${is_2DPoissonVF} EQUAL -1) install( DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/ - DESTINATION share/doc/convergence/2DPoissonVF + DESTINATION doc/convergence_tests/2DPoissonVF FILES_MATCHING PATTERN "*_SQUARE.ipynb" PATTERN "*_SQUARE.pdf" ) install( DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/ - DESTINATION share/doc/convergence/2DPoissonVF/${dir} + DESTINATION doc/convergence_tests/2DPoissonVF/${dir} FILES_MATCHING PATTERN "*.png" PATTERN "*.ipynb" PATTERN "*.py" @@ -143,13 +143,13 @@ IF (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) if(NOT ${is_2DWaveSystem} EQUAL -1) install( DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/ - DESTINATION share/doc/convergence/2DWaveSystemVF_stationary + DESTINATION doc/convergence_tests/2DWaveSystemVF_stationary FILES_MATCHING PATTERN "*_SQUARE.ipynb" PATTERN "*_SQUARE.pdf" ) install( DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/ - DESTINATION share/doc/convergence/2DWaveSystemVF_stationary/${dir} + DESTINATION doc/convergence_tests/2DWaveSystemVF_stationary/${dir} FILES_MATCHING PATTERN "*.png" PATTERN "*.ipynb" PATTERN "*.py" @@ -167,13 +167,13 @@ IF (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO) if(NOT ${is_2DDiffusion} EQUAL -1) install( DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/ - DESTINATION share/doc/convergence/2DAnisotropicDiffusionVF + DESTINATION doc/convergence_tests/2DAnisotropicDiffusionVF FILES_MATCHING PATTERN "*_SQUARE.ipynb" PATTERN "*_SQUARE.pdf" ) install( DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/ - DESTINATION share/doc/convergence/2DAnisotropicDiffusionVF/${dir} + DESTINATION doc/convergence_tests/2DAnisotropicDiffusionVF/${dir} FILES_MATCHING PATTERN "*.png" PATTERN "*.ipynb" PATTERN "*.py"