Add capability to compile petsc with MPI support - Add and fix some SOLVERLAB applica...

diff --git a/applications/SALOME-9.6.0-MPI.pyconf b/applications/SALOME-9.6.0-MPI.pyconf
index 740d0483e9cb5a2b433419db0ada05c5971db7ad..57332722f1e9589f1358eb45aabaf0cb90c3a5f4 100644 (file)
--- a/applications/SALOME-9.6.0-MPI.pyconf
+++ b/applications/SALOME-9.6.0-MPI.pyconf
@@ -170,3 +170,12 @@ APPLICATION :
         single_install_dir : "no"
     }
 }
+
+__overwrite__ :
+[
+  {
+    #
+    __condition__ : "VARS.dist in ['UB20.04']"
+    'PRODUCTS.qt.version_5_9_1.patches' : ['qt-5.9.1-UB20-FD32-socketcanbackend.patch']
+  }
+]

diff --git a/applications/SALOME-master-MPI.pyconf b/applications/SALOME-master-MPI.pyconf
index 61f552394b7bbc61e03404653ea614a7334d183f..95e6cee133fa10f9e4bf5689d408339da6695812 100644 (file)
--- a/applications/SALOME-master-MPI.pyconf
+++ b/applications/SALOME-master-MPI.pyconf
@@ -170,3 +170,11 @@ APPLICATION :
         single_install_dir : "yes"
     }
 }
+__overwrite__ :
+[
+    {
+      #
+      __condition__ : "VARS.dist in ['UB20.04']"
+      'PRODUCTS.qt.version_5_9_1.patches' : ['qt-5.9.1-UB20-FD32-socketcanbackend.patch']
+    }
+]

diff --git a/applications/SOLVERLAB-9.6.0-MPI.pyconf b/applications/SOLVERLAB-9.6.0-MPI.pyconf
new file mode 100644 (file)
index 0000000..7fb57b1
--- /dev/null
+++ b/applications/SOLVERLAB-9.6.0-MPI.pyconf
@@ -0,0 +1,115 @@
+#!/usr/bin/env python
+#-*- coding:utf-8 -*-
+
+APPLICATION :
+{
+    name : 'SOLVERLAB-9.6.0-MPI'
+    workdir : $LOCAL.workdir + $VARS.sep + $APPLICATION.name + '-' + $VARS.dist
+    tag : 'V9_6_0'
+    dev : 'no'
+    verbose :'no'
+    debug : 'no'
+    base : 'no'
+    python3 : 'yes'
+    environ :
+    {
+        build : 
+        {
+           CONFIGURATION_ROOT_DIR : $workdir + $VARS.sep + "SOURCES" + $VARS.sep + "CONFIGURATION"
+           RESTRICTED_ROOT_DIR : $workdir + $VARS.sep + "SOURCES" + $VARS.sep + "RESTRICTED"
+           SALOME_USE_64BIT_IDS : '1'
+        }
+        launch : {PYTHONIOENCODING:"UTF_8", SALOME_MODULES_ORDER:""}
+        SALOME_trace : "local" # local/file:.../with_logger
+        SALOME_MODULES : ""  # specify the first modules to display in gui
+    }
+    products :
+    {
+        # PREREQUISITES :
+        alabaster : '0.7.6'
+        Babel : '2.7.0'
+        boost : '1.58.0'
+        certifi : '2018.8.24'
+        cgns : {tag : '3.3.1', hpc : 'yes'}
+        chardet : '3.0.4'
+        click : '6.7'
+        cmake : '3.12.1'
+        cycler : '0.10.0'
+        Cython : '0.25.2'
+        cppunit : '1.13.2'
+        dateutil : '2.4.2'
+        docutils : '0.12'
+        doxygen : '1.8.14'
+        freetype : '2.9.1'
+        graphviz : '2.38.0'
+        hdf5 : {tag : '1.10.3', hpc : 'yes'}
+        idna : '2.7'
+        imagesize : '1.0.0'
+        Jinja2 : '2.7.3'
+        kiwisolver : '1.0.1'
+        lapack : '3.8.0'
+        libxml2 : '2.9.1'
+        markupsafe : '0.23'
+        matplotlib : '2.2.2'
+        medfile : {tag : '4.1.0', hpc : 'yes', section : 'default_Autotools' }
+        openmpi : '2.1.6'
+        ParMetis : '3.1.1'
+        numpy : '1.15.1'
+        packaging : '17.1'
+        ParaView : {tag : '5.8.0', hpc : 'yes', section: 'version_5_8_0_MPI'}
+        petsc : '3.14.0'
+        Pygments : '2.0.2'
+        pyparsing : '2.0.3'
+        PyQt : '5.9'
+        Python : '3.6.5'
+        pytz : '2015.7'
+        qt : '5.9.1'
+        requests : '2.19.1'
+        scipy : '0.19.1'
+        scotch : '6.0.4'
+        setuptools : '38.4.0'
+        sip : '4.19.3'
+        six : '1.10.0'
+        snowballstemmer : '1.2.1'
+        Sphinx : '1.7.6'
+        sphinxcontrib_websupport : '1.1.0'
+        sphinxintl: '0.9.10'
+        swig : '3.0.12'
+        urllib3 : '1.23'
+
+        # SALOME MODULES :
+        'CONFIGURATION'
+        'MEDCOUPLING' : {section : 'default_MPI', verbose : 'yes'}
+        'SOLVERLAB' : {section : 'default_MPI', hpc: 'yes'}
+    }
+    profile :
+    {
+        launcher_name : "salome"
+    }
+    virtual_app:
+    {
+        name : "salome"
+        application_name : "APPLI"
+    }
+    test_base : 
+    {
+        name : "SALOME"
+        tag : "SalomeV9"
+    }
+    properties :
+    {
+        mesa_launcher_in_package : "yes"
+        repo_dev : "yes"
+        pip : 'yes'
+        pip_install_dir : 'python'
+        single_install_dir : "no"
+    }
+}
+__overwrite__ :
+[
+  {
+    #
+    __condition__ : "VARS.dist in ['UB20.04']"
+    'PRODUCTS.qt.version_5_9_1.patches' : ['qt-5.9.1-UB20-FD32-socketcanbackend.patch']
+  }
+]

diff --git a/applications/SOLVERLAB-9.6.0.pyconf b/applications/SOLVERLAB-9.6.0.pyconf
new file mode 100644 (file)
index 0000000..b6c8734
--- /dev/null
+++ b/applications/SOLVERLAB-9.6.0.pyconf
@@ -0,0 +1,114 @@
+#!/usr/bin/env python
+#-*- coding:utf-8 -*-
+
+APPLICATION :
+{
+    name : 'SOLVERLAB-9.6.0'
+    workdir : $LOCAL.workdir + $VARS.sep + $APPLICATION.name + '-' + $VARS.dist
+    tag : 'V9_6_0'
+    dev : 'no'
+    verbose :'no'
+    debug : 'no'
+    base : 'no'
+    python3 : 'yes'
+    environ :
+    {
+        build : 
+        {
+           CONFIGURATION_ROOT_DIR : $workdir + $VARS.sep + "SOURCES" + $VARS.sep + "CONFIGURATION"
+           RESTRICTED_ROOT_DIR : $workdir + $VARS.sep + "SOURCES" + $VARS.sep + "RESTRICTED"
+           SALOME_USE_64BIT_IDS : '1'
+        }
+        launch : {PYTHONIOENCODING:"UTF_8", SALOME_MODULES_ORDER:""}
+        SALOME_trace : "local" # local/file:.../with_logger
+        SALOME_MODULES : ""  # specify the first modules to display in gui
+    }
+    products :
+    {
+        # PREREQUISITES :
+        alabaster : '0.7.6'
+        Babel : '2.7.0'
+        boost : '1.58.0'
+        certifi : '2018.8.24'
+        cgns : '3.3.1'
+        chardet : '3.0.4'
+        click : '6.7'
+        cmake : '3.12.1'
+        cycler : '0.10.0'
+        Cython : '0.25.2'
+        cppunit : '1.13.2'
+        dateutil : '2.4.2'
+        docutils : '0.12'
+        doxygen : '1.8.14'
+        freetype : '2.9.1'
+        graphviz : '2.38.0'
+        hdf5 : '1.10.3'
+        idna : '2.7'
+        imagesize : '1.0.0'
+        Jinja2 : '2.7.3'
+        kiwisolver : '1.0.1'
+        lapack : '3.8.0'
+        libxml2 : '2.9.1'
+        markupsafe : '0.23'
+        matplotlib : '2.2.2'
+        medfile : {section: 'default_Autotools', tag: '4.1.0'}
+        metis : '5.1.0'
+        numpy : '1.15.1'
+        packaging : '17.1'
+        ParaView : '5.8.0'
+        petsc : '3.14.0'
+        Pygments : '2.0.2'
+        pyparsing : '2.0.3'
+        PyQt : '5.9'
+        Python : '3.6.5'
+        pytz : '2015.7'
+        qt : '5.9.1'
+        requests : '2.19.1'
+        scipy : '0.19.1'
+        scotch : '6.0.4'
+        setuptools : '38.4.0'
+        sip : '4.19.3'
+        six : '1.10.0'
+        snowballstemmer : '1.2.1'
+        Sphinx : '1.7.6'
+        sphinxcontrib_websupport : '1.1.0'
+        sphinxintl: '0.9.10'
+        swig : '3.0.12'
+        urllib3 : '1.23'
+
+        # SALOME MODULES :
+        'CONFIGURATION'
+        'MEDCOUPLING' : {section: 'default_int64'} # this will trigger other modules as int64
+        'SOLVERLAB'
+    }
+    profile :
+    {
+        launcher_name : "salome"
+    }
+    virtual_app:
+    {
+        name : "salome"
+        application_name : "APPLI"
+    }
+    test_base : 
+    {
+        name : "SALOME"
+        tag : "SalomeV9"
+    }
+    properties :
+    {
+        mesa_launcher_in_package : "yes"
+        repo_dev : "yes"
+        pip : 'yes'
+        pip_install_dir : 'python'
+        single_install_dir : "no"
+    }
+}
+__overwrite__ :
+[
+  {
+    #
+    __condition__ : "VARS.dist in ['UB20.04']"
+    'PRODUCTS.qt.version_5_9_1.patches' : ['qt-5.9.1-UB20-FD32-socketcanbackend.patch']
+  }
+]

diff --git a/applications/SOLVERLAB-master-int32.pyconf b/applications/SOLVERLAB-master-int32.pyconf
index 97906b9c551399c6e725353f19e75e627c8dd878..f915c25aabc45e2aeb2d92cbbdabab4d36f8a0e6 100644 (file)
--- a/applications/SOLVERLAB-master-int32.pyconf
+++ b/applications/SOLVERLAB-master-int32.pyconf
@@ -100,7 +100,7 @@ APPLICATION :
         repo_dev : "yes"
         pip : 'yes'
         pip_install_dir : 'python'
-        single_install_dir : "yes"
+        single_install_dir : "no"
     }
 }
 __overwrite__ :

diff --git a/applications/SOLVERLAB-master.pyconf b/applications/SOLVERLAB-master.pyconf
index e8b15b4590b08fbf7b673738f8a075df67dcf0bc..8bbdf0bf9035676b244cdd76a091c6a444ca07ec 100644 (file)
--- a/applications/SOLVERLAB-master.pyconf
+++ b/applications/SOLVERLAB-master.pyconf
@@ -101,7 +101,7 @@ APPLICATION :
         repo_dev : "yes"
         pip : 'yes'
         pip_install_dir : 'python'
-        single_install_dir : "yes"
+        single_install_dir : "no"
     }
 }
 __overwrite__ :

diff --git a/products/compil_scripts/petsc.sh b/products/compil_scripts/petsc.sh
old mode 100755 (executable)
new mode 100644 (file)
index bebcbc8..b1b37ec
--- a/products/compil_scripts/petsc.sh
+++ b/products/compil_scripts/petsc.sh
@@ -8,9 +8,19 @@ echo "##########################################################################
 
 cp -r $SOURCE_DIR/* .
 
+CONFIGURE_FLAGS=''
+CONFIGURE_FLAGS=$CONFIGURE_FLAGS" --download-f2cblaslapack=ext/f2cblaslapack-3.4.2.q4"
+CONFIGURE_FLAGS=$CONFIGURE_FLAGS" --download-slepc=ext/slepc-3.14.0"
+
 echo
-echo "*** configure"
-./configure --prefix=$PRODUCT_INSTALL --with-mpi=0 --download-f2cblaslapack=ext/f2cblaslapack-3.4.2.q4 --download-slepc=ext/slepc-3.14.0
+if [ -n "${MPI_ROOT_DIR}" ]
+then
+  echo "*** configure with mpi"
+  ./configure --prefix=${PRODUCT_INSTALL} --with-mpi-dir=${MPI_ROOT_DIR} ${CONFIGURE_FLAGS}
+else
+  echo "*** configure without mpi"
+  ./configure --prefix=${PRODUCT_INSTALL} --with-mpi=0 ${CONFIGURE_FLAGS}
+fi
 
 if [ $? -ne 0 ]
 then

diff --git a/products/petsc.pyconf b/products/petsc.pyconf
index a55aae081fb34e53103fa823172b62c7c28c9b84..bfe320d5a71f78e03f0aef1065f7eac11952c7ee 100644 (file)
--- a/products/petsc.pyconf
+++ b/products/petsc.pyconf
@@ -9,8 +9,8 @@ default :
        env_script : $name + ".py"
     }
     depend : []
+    opt_depend : ["openmpi"]
     source_dir : $APPLICATION.workdir + $VARS.sep + 'SOURCES' + $VARS.sep + $name
     build_dir : $APPLICATION.workdir + $VARS.sep + 'BUILD' + $VARS.sep + $name
     install_dir : 'base'
 }
-