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Multijob ready for persalys.
authorOvidiu MIRCESCU <ovidiu.mircescu@edf.fr>
Fri, 13 Nov 2020 14:27:47 +0000 (15:27 +0100)
committerOvidiu MIRCESCU <ovidiu.mircescu@edf.fr>
Fri, 13 Nov 2020 14:27:47 +0000 (15:27 +0100)
src/cpp/CMakeLists.txt
src/cpp/Launcher.hxx
src/cpp/PyStudyJob.cxx [new file with mode: 0644]
src/cpp/PyStudyJob.hxx [new file with mode: 0644]
src/cpp/TPyStudyJob.hxx [new file with mode: 0644]
src/cpp/Test/PyTestMain.cxx [new file with mode: 0644]
src/cpp/Test/StudyGeneralTest.cxx
src/cpp/Test/StudyGeneralTest.hxx
src/pydefx/plugins/jobexecutor.py

index 841f83f2a89be7840f1f4ca1593ccb1b7ab03b81..417350adc7257f360baf69eb846ee3e25db3f278 100644 (file)
@@ -30,6 +30,7 @@ SET(ydefx_SOURCES
   JobParametersProxy.cxx
   Exceptions.cxx
   MonoPyJob.cxx
+  PyStudyJob.cxx
 )
 
 SET(ydefx_HEADERS
@@ -44,6 +45,8 @@ SET(ydefx_HEADERS
   TMonoPyJob.hxx
   Job.hxx
   Launcher.hxx
+  PyStudyJob.hxx
+  TPyStudyJob.hxx
 )
 
 SET(ydefx_LINK
index 60c140419a825743e3913885c39e2526735ef66a..4d102cd6348d18883aeef5dfff3600fd5932a38d 100644 (file)
@@ -20,6 +20,7 @@
 #define YDEFX_LAUNCHER_H
 
 #include "TMonoPyJob.hxx"
+#include "TPyStudyJob.hxx"
 
 namespace ydefx
 {
@@ -39,6 +40,12 @@ public:
                        Sample<Ts...>& sample,
                        const JobParametersProxy& params);
 
+  template <class ...Ts>
+  Job* submitPyStudyJob(py2cpp::PyPtr& pyStudyObj,
+                        const PyStudyFunction& fnScript,
+                        Sample<Ts...>& sample,
+                        const JobParametersProxy& params);
+
   /*!
    * Connect to an already created job.
    * Return nullptr in case of failure. Check the error with lastError().
@@ -97,6 +104,45 @@ Job* Launcher::submitMonoPyJob(const PyStudyFunction& fnScript,
   return result;
 }
 
+template <class ...Ts>
+Job* Launcher::submitPyStudyJob(py2cpp::PyPtr& pyStudyObj,
+                                const PyStudyFunction& fnScript,
+                                Sample<Ts...>& sample,
+                                const JobParametersProxy& params)
+{
+  Job* result = nullptr;
+  _lastError = "";
+  try
+  {
+    result = new TPyStudyJob<Ts...>(pyStudyObj, fnScript, sample, params);
+  }
+  catch(std::exception& e)
+  {
+    if(result != nullptr)
+      delete result;
+    result = nullptr;
+    _lastError = e.what();
+    return result;
+  }
+
+  if(!result->lastError().empty())
+  {
+    _lastError  = result->lastError();
+    delete result;
+    result = nullptr;
+    return result;
+  }
+
+  if(!result->launch())
+  {
+    _lastError = "Failed to submit job.\n";
+    _lastError  += result->lastError();
+    delete result;
+    result = nullptr;
+  }
+  return result;
+}
+
 template <class ...Ts>
 Job* Launcher::connectJob(const std::string& jobDump,
                       Sample<Ts...>& sample)
diff --git a/src/cpp/PyStudyJob.cxx b/src/cpp/PyStudyJob.cxx
new file mode 100644 (file)
index 0000000..a7171a4
--- /dev/null
@@ -0,0 +1,153 @@
+// Copyright (C) 2019  EDF R&D
+//
+// This library is free software; you can redistribute it and/or
+// modify it under the terms of the GNU Lesser General Public
+// License as published by the Free Software Foundation; either
+// version 2.1 of the License, or (at your option) any later version.
+//
+// This library is distributed in the hope that it will be useful,
+// but WITHOUT ANY WARRANTY; without even the implied warranty of
+// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+// Lesser General Public License for more details.
+//
+// You should have received a copy of the GNU Lesser General Public
+// License along with this library; if not, write to the Free Software
+// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307 USA
+//
+// See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
+//
+#include "PyStudyJob.hxx"
+#include <py2cpp/py2cpp.hxx>
+
+namespace ydefx
+{
+PyStudyJob::PyStudyJob()
+: _pyStudy()
+, _lastError()
+, _waitDelay(10)
+{
+  py2cpp::PyFunction objConstructor;
+  objConstructor.loadExp("pydefx", "PyStudy");
+  _pyStudy = objConstructor();
+}
+
+PyStudyJob::PyStudyJob(const std::string& pymodule_name, const std::string& pyclass_name)
+: _pyStudy()
+, _lastError()
+, _waitDelay(10)
+{
+  py2cpp::PyFunction objConstructor;
+  objConstructor.loadExp(pymodule_name, pyclass_name);
+  _pyStudy = objConstructor();
+}
+
+PyStudyJob::PyStudyJob(py2cpp::PyPtr& pyStudyObj)
+: _pyStudy(pyStudyObj)
+, _lastError()
+, _waitDelay(10)
+{
+}
+
+PyStudyJob::~PyStudyJob()
+{
+}
+
+std::string PyStudyJob::state()
+{
+  std::string result;
+  _lastError = "";
+  try
+  {
+    py2cpp::PyFunction pyFn;
+    pyFn.loadExp(_pyStudy, "getJobState");
+    py2cpp::pyResult(result) = pyFn();
+  }
+  catch(std::exception& e)
+  {
+    _lastError = "An error occured while retrieving job's state.\n";
+    _lastError += e.what();
+  }
+  return result;
+}
+
+double PyStudyJob::progress()
+{
+  double result;
+  py2cpp::PyFunction pyFn;
+  _lastError = "";
+  try
+  {
+    pyFn.loadExp(_pyStudy, "getProgress");
+    py2cpp::pyResult(result) = pyFn();
+  }
+  catch(std::exception& e)
+  {
+    _lastError = "An error occured while retrieving job's progress.\n";
+    _lastError += e.what();
+  }
+  return result;
+}
+
+std::string PyStudyJob::dump()
+{
+  std::string result;
+  _lastError = "";
+  try
+  {
+    py2cpp::PyFunction pyFn;
+    pyFn.loadExp(_pyStudy, "dump");
+    py2cpp::pyResult(result) = pyFn();
+  }
+  catch(std::exception& e)
+  {
+    _lastError = "An error occured while dumping the job.\n";
+    _lastError += e.what();
+  }
+  return result;
+}
+
+bool PyStudyJob::launch()
+{
+  _lastError = "";
+  try
+  {
+    py2cpp::PyFunction pyFn;
+    pyFn.loadExp(_pyStudy, "launch");
+    pyFn();
+  }
+  catch(std::exception& e)
+  {
+    _lastError = "An error occured while launching the job.\n";
+    _lastError += e.what();
+  }
+  return _lastError.empty();
+}
+
+const std::string& PyStudyJob::lastError()
+{
+  return _lastError;
+}
+
+bool PyStudyJob::wait()
+{
+  _lastError = "";
+  try
+  {
+    py2cpp::PyFunction pyFn;
+    pyFn.loadExp(_pyStudy, "wait");
+    pyFn(_waitDelay);
+  }
+  catch(std::exception& e)
+  {
+    _lastError = "An error occured while waiting the end of the job.\n";
+    _lastError += e.what();
+  }
+  return _lastError.empty();
+}
+
+void PyStudyJob::configureWaitDelay(int seconds)
+{
+  _waitDelay = seconds;
+}
+
+}
diff --git a/src/cpp/PyStudyJob.hxx b/src/cpp/PyStudyJob.hxx
new file mode 100644 (file)
index 0000000..9daf91d
--- /dev/null
@@ -0,0 +1,49 @@
+// Copyright (C) 2019  EDF R&D
+//
+// This library is free software; you can redistribute it and/or
+// modify it under the terms of the GNU Lesser General Public
+// License as published by the Free Software Foundation; either
+// version 2.1 of the License, or (at your option) any later version.
+//
+// This library is distributed in the hope that it will be useful,
+// but WITHOUT ANY WARRANTY; without even the implied warranty of
+// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+// Lesser General Public License for more details.
+//
+// You should have received a copy of the GNU Lesser General Public
+// License along with this library; if not, write to the Free Software
+// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307 USA
+//
+// See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
+//
+#ifndef YDEFX_PYSTUDYJOB_HXX
+#define YDEFX_PYSTUDYJOB_HXX
+#include "Job.hxx"
+#include <py2cpp/PyPtr.hxx>
+
+namespace ydefx
+{
+class PyStudyJob : public Job
+{
+public:
+  PyStudyJob(const std::string& pymodule_name, const std::string& pyclass_name);
+  PyStudyJob(py2cpp::PyPtr& pyStudyObj); 
+  PyStudyJob();
+  virtual ~PyStudyJob();
+  virtual std::string state();
+  virtual double progress();
+  virtual std::string dump();
+  virtual bool launch(); // return false when it fails
+  virtual bool fetch()=0; // return false when it fails
+  virtual const std::string& lastError();
+  virtual bool wait(); // Wait for the end of the job. Return false when it fails.
+  virtual void configureWaitDelay(int seconds);
+protected:
+  py2cpp::PyPtr _pyStudy;
+  std::string _lastError;
+  int _waitDelay;
+};
+
+}
+
+#endif //YDEFX_PYSTUDYJOB_HXX
diff --git a/src/cpp/TPyStudyJob.hxx b/src/cpp/TPyStudyJob.hxx
new file mode 100644 (file)
index 0000000..57270c5
--- /dev/null
@@ -0,0 +1,135 @@
+// Copyright (C) 2019  EDF R&D
+//
+// This library is free software; you can redistribute it and/or
+// modify it under the terms of the GNU Lesser General Public
+// License as published by the Free Software Foundation; either
+// version 2.1 of the License, or (at your option) any later version.
+//
+// This library is distributed in the hope that it will be useful,
+// but WITHOUT ANY WARRANTY; without even the implied warranty of
+// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+// Lesser General Public License for more details.
+//
+// You should have received a copy of the GNU Lesser General Public
+// License along with this library; if not, write to the Free Software
+// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307 USA
+//
+// See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
+//
+#ifndef YDEFX_TPYSTUDYJOB_HXX
+#define YDEFX_TPYSTUDYJOB_HXX
+#include "JobParametersProxy.hxx"
+#include "PyStudyJob.hxx"
+#include "SamplePyConversions.hxx"
+#include "PyStudyFunction.hxx"
+
+namespace ydefx
+{
+template <class ...Ts>
+class TPyStudyJob : public PyStudyJob
+{
+public:
+  //! Create a new job using the default pystudy class.
+  TPyStudyJob(const PyStudyFunction& fnScript,
+             Sample<Ts...>& sample,
+             const JobParametersProxy& params)
+  : PyStudyJob()
+  , _sample(sample)
+  {
+    createNewJob(fnScript, params);
+    /*if(_lastError.empty()) // no errors during parent construction
+    {
+      try
+      {
+        py2cpp::PyPtr pySample = createPySample(sample);
+        py2cpp::PyFunction pyFn;
+        pyFn.loadExp(_pyStudy, "createNewJob");
+        pyFn(fnScript, pySample, params);
+      }
+      catch(std::exception& e)
+      {
+        _lastError = "An error occured while creating the job.\n";
+        _lastError += e.what();
+      }
+    }*/
+  }
+
+  TPyStudyJob(py2cpp::PyPtr& pyStudyObj,
+             const PyStudyFunction& fnScript,
+             Sample<Ts...>& sample,
+             const JobParametersProxy& params)
+  : PyStudyJob(pyStudyObj)
+  , _sample(sample)
+  {
+    createNewJob(fnScript, params);
+  }
+
+  //! Connect to an existing job.
+  TPyStudyJob(const std::string& jobDump, Sample<Ts...>& sample)
+  : PyStudyJob()
+  , _sample(sample)
+  {
+    if(_lastError.empty()) // no errors during parent construction
+    {
+      try
+      {
+        py2cpp::PyFunction pyFn;
+        pyFn.loadExp(_pyStudy, "loadFromString");
+        pyFn(jobDump);
+      }
+      catch(std::exception& e)
+      {
+        _lastError = "An error occured while creating the job.\n";
+        _lastError += e.what();
+      }
+    }
+  }
+  
+  virtual ~TPyStudyJob(){}
+  virtual bool fetch()
+  {
+    _lastError = "";
+    try
+    {
+      py2cpp::PyFunction pyFn;
+      pyFn.loadExp(_pyStudy, "getResult");
+      pyFn(); // python call: _pyStudy.getResult()
+      fetchResults(_pyStudy.getAttr("sample"), _sample);
+    }
+    catch(std::exception& e)
+    {
+      _lastError = "An error occured while fetching the results.\n";
+      _lastError += e.what();
+    }
+    return _lastError.empty();
+  }
+
+  const Sample<Ts...>& getSample()const{return _sample;}
+
+private:
+  void createNewJob(const PyStudyFunction& fnScript, const JobParametersProxy& params)
+  {
+    if(_lastError.empty()) // no errors during parent construction
+    {
+      try
+      {
+        py2cpp::PyPtr pySample = createPySample(_sample);
+        py2cpp::PyFunction pyFn;
+        pyFn.loadExp(_pyStudy, "createNewJob");
+        pyFn(fnScript, pySample, params);
+      }
+      catch(std::exception& e)
+      {
+        _lastError = "An error occured while creating the job.\n";
+        _lastError += e.what();
+      }
+    }
+  }
+
+private:
+  Sample<Ts...>& _sample;
+};
+
+}
+
+#endif //YDEFX_TPYSTUDYJOB_HXX
diff --git a/src/cpp/Test/PyTestMain.cxx b/src/cpp/Test/PyTestMain.cxx
new file mode 100644 (file)
index 0000000..b5f960e
--- /dev/null
@@ -0,0 +1,88 @@
+// Copyright (C) 2019  EDF R&D
+//
+// This library is free software; you can redistribute it and/or
+// modify it under the terms of the GNU Lesser General Public
+// License as published by the Free Software Foundation; either
+// version 2.1 of the License, or (at your option) any later version.
+//
+// This library is distributed in the hope that it will be useful,
+// but WITHOUT ANY WARRANTY; without even the implied warranty of
+// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+// Lesser General Public License for more details.
+//
+// You should have received a copy of the GNU Lesser General Public
+// License along with this library; if not, write to the Free Software
+// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307 USA
+//
+// See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
+//
+#include <cppunit/CompilerOutputter.h>
+#include <cppunit/TestResult.h>
+#include <cppunit/TestResultCollector.h>
+#include <cppunit/TextTestProgressListener.h>
+#include <cppunit/BriefTestProgressListener.h>
+#include <cppunit/extensions/TestFactoryRegistry.h>
+#include <cppunit/TestRunner.h>
+#include <cppunit/TextTestRunner.h>
+#include <stdexcept>
+
+#include <iostream>
+#include <fstream>
+#include <stdlib.h>
+#include <Python.h>
+
+// ============================================================================
+/*!
+ *  Main program source for Unit Tests with cppunit package does not depend
+ *  on actual tests, so we use the same for all partial unit tests.
+ *  This version of TestMain initializes the python library and it can be used
+ *  if you have several tests which need Py_Initialize and salome_init.
+ */
+// ============================================================================
+
+int main(int argc, char* argv[])
+{
+  Py_Initialize();
+  // --- Create the event manager and test controller
+  CPPUNIT_NS::TestResult controller;
+
+  // ---  Add a listener that collects test result
+  CPPUNIT_NS::TestResultCollector result;
+  controller.addListener( &result );        
+
+  // ---  Add a listener that print dots as test run.
+#ifdef WIN32
+  CPPUNIT_NS::TextTestProgressListener progress;
+#else
+  CPPUNIT_NS::BriefTestProgressListener progress;
+#endif
+  controller.addListener( &progress );      
+
+  // ---  Get the top level suite from the registry
+
+  CPPUNIT_NS::Test *suite =
+    CPPUNIT_NS::TestFactoryRegistry::getRegistry().makeTest();
+
+  // ---  Adds the test to the list of test to run
+
+  CPPUNIT_NS::TestRunner runner;
+  runner.addTest( suite );
+  runner.run( controller);
+
+  // ---  Print test in a compiler compatible format.
+  std::ofstream testFile;
+  testFile.open("test.log", std::ios::out | std::ios::app);
+  testFile << "------ Idefix test log:" << std::endl;
+  CPPUNIT_NS::CompilerOutputter outputter( &result, testFile );
+  outputter.write(); 
+
+  // ---  Run the tests.
+
+  bool wasSucessful = result.wasSuccessful();
+  testFile.close();
+  Py_Finalize();
+
+  // ---  Return error code 1 if the one of test failed.
+
+  return wasSucessful ? 0 : 1;
+}
index cac120e3ecac19f852040bfc73ca00a8bb4ac611..e633129dac8bd64ee9a7d5c91a4be2421e9a7e09 100644 (file)
@@ -34,8 +34,6 @@ void SampleTest::cleanUp()
 
 void SampleTest::fullStudy()
 {
-  Py_Initialize();
-  {
     std::list<std::string> resources = ydefx::JobParametersProxy::AvailableResources();
     CPPUNIT_ASSERT(resources.size() > 0);
 
@@ -43,7 +41,7 @@ void SampleTest::fullStudy()
     jobParams.configureResource("localhost");
     jobParams.work_directory(jobParams.work_directory() + "/GeneralTest");
     jobParams.createResultDirectory("/tmp");
-    std::string pyScript = 
+    std::string pyScript =
 "def _exec(a, b):\n"
 "  d = a / b\n"
 "  t = ['object which needs pickel protocol']\n"
@@ -109,9 +107,88 @@ void SampleTest::fullStudy()
     myJob = l.submitMonoPyJob(wrongStudy, sample, jobParams);
     CPPUNIT_ASSERT(myJob == nullptr);
     CPPUNIT_ASSERT(l.lastError().find("SyntaxError") != std::string::npos);
-  }
-  Py_Finalize();
+}
+
+void SampleTest::genericStudy()
+{
+    std::list<std::string> resources = ydefx::JobParametersProxy::AvailableResources();
+    CPPUNIT_ASSERT(resources.size() > 0);
+
+    ydefx::JobParametersProxy jobParams;
+    jobParams.configureResource("localhost");
+    jobParams.work_directory(jobParams.work_directory() + "/GenericTest");
+    jobParams.createResultDirectory("/tmp");
+    std::string pyScript =
+"def _exec(a, b):\n"
+"  d = a / b\n"
+"  t = ['object which needs pickel protocol']\n"
+"  return d,t\n";
+
+    ydefx::PyStudyFunction studyFunction;
+    studyFunction.loadString(pyScript);
+    CPPUNIT_ASSERT(studyFunction.isValid());
+    const std::list<std::string>& inputs = studyFunction.inputNames();
+    CPPUNIT_ASSERT(std::find(inputs.begin(), inputs.end(), "a")!=inputs.end());
+    CPPUNIT_ASSERT(std::find(inputs.begin(), inputs.end(), "b")!=inputs.end());
+    const std::list<std::string>& outputs = studyFunction.outputNames();
+    CPPUNIT_ASSERT(std::find(outputs.begin(), outputs.end(), "d")
+                                                              != outputs.end());
+    CPPUNIT_ASSERT(std::find(outputs.begin(), outputs.end(), "t")
+                                                              != outputs.end());
+
+    ydefx::Sample<double, py2cpp::PyPtr > sample;
+    std::vector<double> a_vals = {1.1, 4.4, 9, 4};
+    std::vector<double> b_vals = {1.1, 2.2, 3, 1};
+    sample.inputs<double>().set("a", a_vals);
+    sample.inputs<double>().set("b", b_vals);
+    sample.outputs<double>().addName("d");
+    sample.outputs<py2cpp::PyPtr >().addName("t");
+
+    py2cpp::PyFunction objConstructor;
+    objConstructor.loadExp("pydefx", "PyStudy");
+    py2cpp::PyPtr pyStudy = objConstructor();
+
+    ydefx::Launcher l;
+    ydefx::Job* myJob = l.submitPyStudyJob(pyStudy, studyFunction, sample, jobParams);
+    CPPUNIT_ASSERT(myJob);
+    CPPUNIT_ASSERT(l.lastError().empty());
+    std::string jobDump = myJob->dump();
+    CPPUNIT_ASSERT(myJob->lastError().empty());
+    std::string jobState = myJob->state();
+    CPPUNIT_ASSERT(myJob->lastError().empty());
+    CPPUNIT_ASSERT(jobState == "QUEUED" || jobState == "RUNNING"
+                   || jobState == "FINISHED");
+    double progress = myJob->progress();
+    CPPUNIT_ASSERT(progress >= 0.0 && progress <= 1.0 );
+    CPPUNIT_ASSERT(myJob->lastError().empty());
+    bool ok = myJob->wait();
+    CPPUNIT_ASSERT(ok);
+    CPPUNIT_ASSERT(myJob->lastError().empty());
+    jobState = myJob->state();
+    CPPUNIT_ASSERT(jobState == "FINISHED");
+    progress = myJob->progress();
+    CPPUNIT_ASSERT(progress == 1.0);
+    ok = myJob->fetch();
+    CPPUNIT_ASSERT(ok);
+    CPPUNIT_ASSERT(myJob->lastError().empty());
+    std::vector<double> expectedResult = {1,2,3,4};
+    const std::vector<double>& result = sample.outputs<double>().get("d");
+    CPPUNIT_ASSERT(expectedResult == result);
+    const std::vector<py2cpp::PyPtr>& pyobjResult
+                                     = sample.outputs<py2cpp::PyPtr>().get("t");
+    for(const py2cpp::PyPtr& obj : pyobjResult)
+      CPPUNIT_ASSERT(obj.repr() == "['object which needs pickel protocol']");
+    delete myJob;
+
+    // test a case of error
+    std::string wrongScript = "wrong 'script";
+    ydefx::PyStudyFunction wrongStudy;
+    wrongStudy.loadString(wrongScript);
+    CPPUNIT_ASSERT(!wrongStudy.isValid());
+    myJob = l.submitPyStudyJob(pyStudy, wrongStudy, sample, jobParams);
+    CPPUNIT_ASSERT(myJob == nullptr);
+    CPPUNIT_ASSERT(l.lastError().find("SyntaxError") != std::string::npos);
 }
 
 CPPUNIT_TEST_SUITE_REGISTRATION( SampleTest );
-#include "TestMain.cxx"
+#include "PyTestMain.cxx"
index 473b64526adf5f2c1033a3d13d3355311698d21f..739ce25370bce33b84792dc05598165349070031 100644 (file)
@@ -26,12 +26,14 @@ class SampleTest: public CppUnit::TestFixture
 {
   CPPUNIT_TEST_SUITE(SampleTest);
   CPPUNIT_TEST(fullStudy);
+  CPPUNIT_TEST(genericStudy);
   CPPUNIT_TEST_SUITE_END();
 public:
   void setUp();
   void tearDown();
   void cleanUp();
   void fullStudy();
+  void genericStudy();
 };
 
 #endif // YDEFX_SAMPLETEST_HXX
index 4d56df0d9f77ab54ad744cd27c6c0417199e0dd8..0fdfab12b5d1ae665906ea40903b581cd78161d5 100644 (file)
@@ -4,6 +4,7 @@ import pickle
 import time
 import traceback
 
+pydefx.forceNoSalomeServers()
 class Context:
   def __init__(self):
     self.launcher = pydefx.salome_proxy.getLauncher() # getLauncher()