--- /dev/null
+#include "visu.hxx"
+// #include "MEDCouplingFieldDouble.hxx"
+#include "MEDFileField.hxx"
+#include "MEDCouplingUMesh.hxx"
+#include "MEDCouplingCMesh.hxx"
+#include "MEDCouplingCurveLinearMesh.hxx"
+#include "MEDFileMesh.hxx"
+#include "MEDFileFieldRepresentationTree.hxx"
+#include <iostream>
+#include "mpi.h"
+
+#include <vtkCPDataDescription.h>
+#include <vtkCPInputDataDescription.h>
+#include <vtkCPPythonScriptPipeline.h>
+#include <vtkCPProcessor.h>
+#include "vtkDataSet.h"
+
+
+using namespace MEDCoupling;
+
+
+void Visualization::CatalystInitialize(const std::string& script)
+{
+ if(Processor == NULL)
+ {
+ Processor = vtkCPProcessor::New();
+ Processor->Initialize();
+ }
+ else
+ {
+ Processor->RemoveAllPipelines();
+ }
+ // Add in the Python script
+ vtkCPPythonScriptPipeline* pipeline = vtkCPPythonScriptPipeline::New();
+ char *c = const_cast<char*>(script.c_str());
+ pipeline->Initialize(c);
+ Processor->AddPipeline(pipeline);
+ pipeline->Delete();
+ return;
+}
+
+void Visualization::CatalystFinalize()
+{
+ if(Processor)
+ {
+ Processor->Delete();
+ Processor = NULL;
+ }
+/* uuuuuuuh ... maybe cleaning vtkDataSet
+if(VTKGrid)
+ {
+ VTKGrid->Delete();
+ VTKGrid = NULL;
+ }
+*/
+ return;
+}
+
+void Visualization::CatalystCoProcess(vtkDataSet *VTKGrid, double time,
+ unsigned int timeStep)
+{
+ vtkCPDataDescription* dataDescription = vtkCPDataDescription::New();
+ // specify the simulation time and time step for Catalyst
+ dataDescription->AddInput("input");
+ dataDescription->SetTimeData(time, timeStep);
+
+ if(Processor->RequestDataDescription(dataDescription) != 0)
+ {
+ // Make a map from input to our VTK grid so that
+ // Catalyst gets the proper input dataset for the pipeline.
+ dataDescription->GetInputDescriptionByName("input")->SetGrid(VTKGrid);
+ // Call Catalyst to execute the desired pipelines.
+ Processor->CoProcess(dataDescription);
+ }
+ dataDescription->Delete();
+}
+
+void Visualization::ConvertToVTK(MEDCoupling::MEDCouplingFieldDouble* field, vtkDataSet *VTKGrid)
+{
+
+ MEDCoupling::MEDCouplingFieldDouble *f = field;
+ MEDCoupling::MCAuto<MEDFileField1TS> ff(MEDFileField1TS::New());
+ ff->setFieldNoProfileSBT(f);
+ MCAuto<MEDFileFieldMultiTS> fmts(MEDFileFieldMultiTS::New());
+ fmts->pushBackTimeStep(ff);
+ MCAuto<MEDFileFields> fs(MEDFileFields::New());
+ fs->pushField(fmts);
+
+ MEDCouplingMesh *m(f->getMesh());
+ MCAuto<MEDFileMesh> mm;
+ if(dynamic_cast<MEDCouplingUMesh *>(m))
+ {
+ MCAuto<MEDFileUMesh> mmu(MEDFileUMesh::New());
+ mmu->setMeshAtLevel(0,dynamic_cast<MEDCouplingUMesh *>(m));
+ mm=DynamicCast<MEDFileUMesh,MEDFileMesh>(mmu);
+ }
+ else if(dynamic_cast<MEDCouplingCMesh *>(m))
+ {
+ MCAuto<MEDFileCMesh> mmc(MEDFileCMesh::New());
+ mmc->setMesh(dynamic_cast<MEDCouplingCMesh *>(m));
+ mm=DynamicCast<MEDFileCMesh,MEDFileMesh>(mmc);
+ }
+ else if(dynamic_cast<MEDCouplingCurveLinearMesh *>(m))
+ {
+ // MCAuto<MEDFileCLMesh> mmc(MEDFileCLMesh::New());
+ MCAuto<MEDFileCurveLinearMesh> mmc(MEDFileCurveLinearMesh::New());
+ mmc->setMesh(dynamic_cast<MEDCouplingCurveLinearMesh *>(m));
+ //mm=DynamicCast<MEDCouplingCurveLinearMesh,MEDFileMesh>(mmc);
+ mm=0;
+ }
+ throw ;
+ MCAuto<MEDFileMeshes> ms(MEDFileMeshes::New());
+ ms->pushMesh(mm);
+ MEDFileFieldRepresentationTree Tree;
+ Tree.loadInMemory(fs,ms);
+ std::string meshName;
+ TimeKeeper TK(0);
+ int tmp1,tmp2;
+ double tmp3(f->getTime(tmp1,tmp2));
+ vtkDataSet *ret(Tree.buildVTKInstance(true,tmp3,meshName,TK));
+ VTKGrid = ret;
+}
+
+Visualization::Visualization()
+{
+Processor = NULL;
+}
+
+
+// ajouter en parametre le fichier python qui contient le pipeline
+// enlever le const s'il gene
+void Visualization::run(MEDCoupling::MEDCouplingFieldDouble* field, const std::string& pathPipeline)
+{
+ int proc_id;
+ MPI_Comm_rank(MPI_COMM_WORLD,&proc_id);
+ if( field == NULL)
+ {
+ std::cerr << "Description n° " << proc_id << ": NULL pointer" << std::endl;
+ }
+ std::cerr << "Description n° " << proc_id << ":"
+ << field->getDescription() << std::endl;
+
+
+ CatalystInitialize(pathPipeline);
+
+ vtkDataSet *VTKGrid = 0;
+ ConvertToVTK(field, VTKGrid);
+
+ // Time information for CatalystCoProcess
+ int iteration = 0;
+ int order = 0;
+ double time = field->getTime(iteration, order);
+
+ CatalystCoProcess(VTKGrid, time, iteration);
+
+ CatalystFinalize();
+
+ return ;
+}
+
-// Copyright (C) 2010-2016 CEA/DEN, EDF R&D
+// Copyright (C) 2010-2015 CEA/DEN, EDF R&D
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
#include "vtkInformationQuadratureSchemeDefinitionVectorKey.h"
#include "vtkInformationIntegerKey.h"
#include "vtkInformation.h"
-#include "vtkDataArrayTemplate.h"
#include "vtkIdTypeArray.h"
#include "vtkDoubleArray.h"
#include "vtkIntArray.h"
#include "vtkCellData.h"
#include "vtkMutableDirectedGraph.h"
+#include "vtkDataArrayTemplate.h"
using namespace MEDCoupling;
const char MEDFileFieldRepresentationLeavesArrays::NUM_ID_NODE_NAME[]="NumIdNode";
-const char MEDFileFieldRepresentationLeavesArrays::GLOBAL_NODE_ID_NAME[]="GlobalNodeIds";// WARNING DO NOT CHANGE IT BEFORE HAVING CHECKED IN PV SOURCES !
-
const char MEDFileFieldRepresentationTree::ROOT_OF_GRPS_IN_TREE[]="zeGrps";
const char MEDFileFieldRepresentationTree::ROOT_OF_FAM_IDS_IN_TREE[]="zeFamIds";
_loc_names=locNames;
_elgas=elgas;
_defs.push_back(defs);
- return elga;
}
void ELGACmp::appendELGAIfAny(vtkDataSet *ds) const
//=
-template<class T>
-class MEDFileVTKTraits
-{
-public:
- typedef void VtkType;
- typedef void MCType;
-};
-
-template<>
-class MEDFileVTKTraits<int>
-{
-public:
- typedef vtkIntArray VtkType;
- typedef MEDCoupling::DataArrayInt MCType;
-};
-
-template<>
-class MEDFileVTKTraits<double>
-{
-public:
- typedef vtkDoubleArray VtkType;
- typedef MEDCoupling::DataArrayDouble MCType;
-};
-
-template<class T>
-void AssignDataPointerToVTK(typename MEDFileVTKTraits<T>::VtkType *vtkTab, typename MEDFileVTKTraits<T>::MCType *mcTab, bool noCpyNumNodes)
-{
- if(noCpyNumNodes)
- vtkTab->SetArray(mcTab->getPointer(),mcTab->getNbOfElems(),1,vtkDataArrayTemplate<T>::VTK_DATA_ARRAY_FREE);
- else
- { vtkTab->SetArray(mcTab->getPointer(),mcTab->getNbOfElems(),0,vtkDataArrayTemplate<T>::VTK_DATA_ARRAY_FREE); mcTab->accessToMemArray().setSpecificDeallocator(0); }
-}
-
-// here copy is always assumed.
-template<class VTKT, class MCT>
-void AssignDataPointerOther(VTKT *vtkTab, MCT *mcTab, int nbElems)
-{
- vtkTab->SetVoidArray(reinterpret_cast<unsigned char *>(mcTab->getPointer()),nbElems,0,VTKT::VTK_DATA_ARRAY_FREE);
- mcTab->accessToMemArray().setSpecificDeallocator(0);
-}
-
-//=
-
MEDFileFieldRepresentationLeavesArrays::MEDFileFieldRepresentationLeavesArrays():_id(-1)
{
}
void MEDFileFieldRepresentationLeavesArrays::appendFields(const MEDTimeReq *tr, const MEDCoupling::MEDFileFieldGlobsReal *globs, const MEDCoupling::MEDMeshMultiLev *mml, const MEDCoupling::MEDFileMeshStruct *mst, vtkDataSet *ds) const
{
+ const int VTK_DATA_ARRAY_FREE=vtkDataArrayTemplate<double>::VTK_DATA_ARRAY_FREE;
const int VTK_DATA_ARRAY_DELETE=vtkDataArrayTemplate<double>::VTK_DATA_ARRAY_DELETE;
tr->setNumberOfTS((operator->())->getNumberOfTS());
tr->initIterator();
vtkd->SetNumberOfComponents(vd->getNumberOfComponents());
for(int i=0;i<vd->getNumberOfComponents();i++)
vtkd->SetComponentName(i,vd->getInfoOnComponent(i).c_str());
- AssignDataPointerToVTK<double>(vtkd,vd,postProcessedArr==crudeArr);
+ if(postProcessedArr!=crudeArr)
+ {
+ vtkd->SetArray(vd->getPointer(),vd->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); vd->accessToMemArray().setSpecificDeallocator(0);
+ }
+ else
+ {
+ vtkd->SetArray(vd->getPointer(),vd->getNbOfElems(),1,VTK_DATA_ARRAY_FREE);
+ }
std::string name(tr->buildName(f1ts->getName()));
vtkd->SetName(name.c_str());
att->AddArray(vtkd);
vtkQuadratureSchemeDefinition *def(vtkQuadratureSchemeDefinition::New());
double *shape(new double[nbGaussPt*nbGaussPt]);
std::size_t dummy;
- const double *gsCoords(MEDCouplingFieldDiscretizationGaussNE::GetRefCoordsFromGeometricType(ct,dummy));//GetLocsFromGeometricType
+ const double *gsCoords(MEDCouplingFieldDiscretizationGaussNE::GetLocsFromGeometricType(ct,dummy));
const double *refCoords(MEDCouplingFieldDiscretizationGaussNE::GetRefCoordsFromGeometricType(ct,dummy));
const double *weights(MEDCouplingFieldDiscretizationGaussNE::GetWeightArrayFromGeometricType(ct,dummy));
std::vector<double> gsCoords2(gsCoords,gsCoords+nbGaussPt*dim),refCoords2(refCoords,refCoords+nbGaussPt*dim);
vtkd->SetNumberOfComponents(vi->getNumberOfComponents());
for(int i=0;i<vi->getNumberOfComponents();i++)
vtkd->SetComponentName(i,vi->getVarOnComponent(i).c_str());
- AssignDataPointerToVTK<int>(vtkd,vi,postProcessedArr==crudeArr);
+ if(postProcessedArr!=crudeArr)
+ {
+ vtkd->SetArray(vi->getPointer(),vi->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); vi->accessToMemArray().setSpecificDeallocator(0);
+ }
+ else
+ {
+ vtkd->SetArray(vi->getPointer(),vi->getNbOfElems(),1,VTK_DATA_ARRAY_FREE);
+ }
std::string name(tr->buildName(f1ts->getName()));
vtkd->SetName(name.c_str());
att->AddArray(vtkd);
vtkUnstructuredGrid *MEDFileFieldRepresentationLeaves::buildVTKInstanceNoTimeInterpolationUnstructured(MEDUMeshMultiLev *mm) const
{
+ const int VTK_DATA_ARRAY_FREE=vtkDataArrayTemplate<double>::VTK_DATA_ARRAY_FREE;
DataArrayDouble *coordsMC(0);
DataArrayByte *typesMC(0);
DataArrayInt *cellLocationsMC(0),*cellsMC(0),*faceLocationsMC(0),*facesMC(0);
int nbOfCells(typesSafe->getNbOfElems());
vtkUnstructuredGrid *ret(vtkUnstructuredGrid::New());
vtkUnsignedCharArray *cellTypes(vtkUnsignedCharArray::New());
- AssignDataPointerOther<vtkUnsignedCharArray,DataArrayByte>(cellTypes,typesSafe,nbOfCells);
+ cellTypes->SetArray(reinterpret_cast<unsigned char *>(typesSafe->getPointer()),nbOfCells,0,VTK_DATA_ARRAY_FREE); typesSafe->accessToMemArray().setSpecificDeallocator(0);
vtkIdTypeArray *cellLocations(vtkIdTypeArray::New());
- AssignDataPointerOther<vtkIdTypeArray,DataArrayInt>(cellLocations,cellLocationsSafe,nbOfCells);
+ cellLocations->SetVoidArray(cellLocationsSafe->getPointer(),nbOfCells,0,VTK_DATA_ARRAY_FREE); cellLocationsSafe->accessToMemArray().setSpecificDeallocator(0);
vtkCellArray *cells(vtkCellArray::New());
vtkIdTypeArray *cells2(vtkIdTypeArray::New());
- AssignDataPointerOther<vtkIdTypeArray,DataArrayInt>(cells2,cellsSafe,cellsSafe->getNbOfElems());
+ cells2->SetVoidArray(cellsSafe->getPointer(),cellsSafe->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); cellsSafe->accessToMemArray().setSpecificDeallocator(0);
cells->SetCells(nbOfCells,cells2);
cells2->Delete();
if(faceLocationsMC!=0 && facesMC!=0)
{
vtkIdTypeArray *faces(vtkIdTypeArray::New());
- AssignDataPointerOther<vtkIdTypeArray,DataArrayInt>(faces,facesSafe,facesSafe->getNbOfElems());
+ faces->SetVoidArray(facesSafe->getPointer(),facesSafe->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); facesSafe->accessToMemArray().setSpecificDeallocator(0);
vtkIdTypeArray *faceLocations(vtkIdTypeArray::New());
- AssignDataPointerOther<vtkIdTypeArray,DataArrayInt>(faceLocations,faceLocationsSafe,faceLocationsSafe->getNbOfElems());
+ faceLocations->SetVoidArray(faceLocationsSafe->getPointer(),faceLocationsSafe->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); faceLocationsSafe->accessToMemArray().setSpecificDeallocator(0);
ret->SetCells(cellTypes,cellLocations,cells,faceLocations,faces);
faceLocations->Delete();
faces->Delete();
vtkPoints *pts(vtkPoints::New());
vtkDoubleArray *pts2(vtkDoubleArray::New());
pts2->SetNumberOfComponents(3);
- AssignDataPointerToVTK<double>(pts2,coordsSafe,statusOfCoords);
+ if(!statusOfCoords)
+ {
+ pts2->SetArray(coordsSafe->getPointer(),coordsSafe->getNbOfElems(),0,VTK_DATA_ARRAY_FREE);
+ coordsSafe->accessToMemArray().setSpecificDeallocator(0);
+ }
+ else
+ pts2->SetArray(coordsSafe->getPointer(),coordsSafe->getNbOfElems(),1,VTK_DATA_ARRAY_FREE);
pts->SetData(pts2);
pts2->Delete();
ret->SetPoints(pts);
vtkRectilinearGrid *MEDFileFieldRepresentationLeaves::buildVTKInstanceNoTimeInterpolationCartesian(MEDCoupling::MEDCMeshMultiLev *mm) const
{
+ const int VTK_DATA_ARRAY_FREE=vtkDataArrayTemplate<double>::VTK_DATA_ARRAY_FREE;
bool isInternal;
std::vector< DataArrayDouble * > arrs(mm->buildVTUArrays(isInternal));
vtkDoubleArray *vtkTmp(0);
ret->SetDimensions(sizePerAxe[0],sizePerAxe[1],sizePerAxe[2]);
vtkTmp=vtkDoubleArray::New();
vtkTmp->SetNumberOfComponents(1);
- AssignDataPointerToVTK<double>(vtkTmp,arrs[0],isInternal);
+ if(isInternal)
+ vtkTmp->SetArray(arrs[0]->getPointer(),arrs[0]->getNbOfElems(),1,VTK_DATA_ARRAY_FREE);
+ else
+ { vtkTmp->SetArray(arrs[0]->getPointer(),arrs[0]->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); arrs[0]->accessToMemArray().setSpecificDeallocator(0); }
ret->SetXCoordinates(vtkTmp);
vtkTmp->Delete();
arrs[0]->decrRef();
{
vtkTmp=vtkDoubleArray::New();
vtkTmp->SetNumberOfComponents(1);
- AssignDataPointerToVTK<double>(vtkTmp,arrs[1],isInternal);
+ if(isInternal)
+ vtkTmp->SetArray(arrs[1]->getPointer(),arrs[1]->getNbOfElems(),1,VTK_DATA_ARRAY_FREE);
+ else
+ { vtkTmp->SetArray(arrs[1]->getPointer(),arrs[1]->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); arrs[1]->accessToMemArray().setSpecificDeallocator(0); }
ret->SetYCoordinates(vtkTmp);
vtkTmp->Delete();
arrs[1]->decrRef();
{
vtkTmp=vtkDoubleArray::New();
vtkTmp->SetNumberOfComponents(1);
- AssignDataPointerToVTK<double>(vtkTmp,arrs[2],isInternal);
+ if(isInternal)
+ vtkTmp->SetArray(arrs[2]->getPointer(),arrs[2]->getNbOfElems(),1,VTK_DATA_ARRAY_FREE);
+ else
+ { vtkTmp->SetArray(arrs[2]->getPointer(),arrs[2]->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); arrs[2]->accessToMemArray().setSpecificDeallocator(0); }
ret->SetZCoordinates(vtkTmp);
vtkTmp->Delete();
arrs[2]->decrRef();
vtkStructuredGrid *MEDFileFieldRepresentationLeaves::buildVTKInstanceNoTimeInterpolationCurveLinear(MEDCoupling::MEDCurveLinearMeshMultiLev *mm) const
{
+ const int VTK_DATA_ARRAY_FREE=vtkDataArrayTemplate<double>::VTK_DATA_ARRAY_FREE;
int meshStr[3]={1,1,1};
DataArrayDouble *coords(0);
std::vector<int> nodeStrct;
vtkDoubleArray *da(vtkDoubleArray::New());
da->SetNumberOfComponents(3);
if(coords->getNumberOfComponents()==3)
- AssignDataPointerToVTK<double>(da,coords,isInternal);//if isIntenal==True VTK has not the ownership of double * because MEDLoader main struct has it !
+ {
+ if(isInternal)
+ da->SetArray(coords->getPointer(),coords->getNbOfElems(),1,VTK_DATA_ARRAY_FREE);//VTK has not the ownership of double * because MEDLoader main struct has it !
+ else
+ { da->SetArray(coords->getPointer(),coords->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); coords->accessToMemArray().setSpecificDeallocator(0); }
+ }
else
{
MCAuto<DataArrayDouble> coords2(coords->changeNbOfComponents(3,0.));
- AssignDataPointerToVTK<double>(da,coords2,false);//let VTK deal with double *
+ da->SetArray(coords2->getPointer(),coords2->getNbOfElems(),0,VTK_DATA_ARRAY_FREE);//let VTK deal with double *
+ coords2->accessToMemArray().setSpecificDeallocator(0);
}
coords->decrRef();
vtkPoints *points=vtkPoints::New();
vtkDataSet *MEDFileFieldRepresentationLeaves::buildVTKInstanceNoTimeInterpolation(const MEDTimeReq *tr, const MEDFileFieldGlobsReal *globs, const MEDCoupling::MEDFileMeshes *meshes) const
{
+ const int VTK_DATA_ARRAY_FREE=vtkDataArrayTemplate<double>::VTK_DATA_ARRAY_FREE;
vtkDataSet *ret(0);
//_fsp->isDataSetSupportEqualToThePreviousOne(i,globs);
MCAuto<MEDMeshMultiLev> mml(_fsp->buildFromScratchDataSetSupport(0,globs));//0=timestep Id. Make the hypothesis that support does not change
vtkIntArray *vtkTab(vtkIntArray::New());
vtkTab->SetNumberOfComponents(1);
vtkTab->SetName(MEDFileFieldRepresentationLeavesArrays::FAMILY_ID_CELL_NAME);
- AssignDataPointerToVTK<int>(vtkTab,famCells,noCpyFamCells);
+ if(noCpyFamCells)
+ vtkTab->SetArray(famCells->getPointer(),famCells->getNbOfElems(),1,VTK_DATA_ARRAY_FREE);
+ else
+ { vtkTab->SetArray(famCells->getPointer(),famCells->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); famCells->accessToMemArray().setSpecificDeallocator(0); }
ret->GetCellData()->AddArray(vtkTab);
vtkTab->Delete();
famCells->decrRef();
vtkIntArray *vtkTab(vtkIntArray::New());
vtkTab->SetNumberOfComponents(1);
vtkTab->SetName(MEDFileFieldRepresentationLeavesArrays::NUM_ID_CELL_NAME);
- AssignDataPointerToVTK<int>(vtkTab,numCells,noCpyNumCells);
+ if(noCpyNumCells)
+ vtkTab->SetArray(numCells->getPointer(),numCells->getNbOfElems(),1,VTK_DATA_ARRAY_FREE);
+ else
+ { vtkTab->SetArray(numCells->getPointer(),numCells->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); numCells->accessToMemArray().setSpecificDeallocator(0); }
ret->GetCellData()->AddArray(vtkTab);
vtkTab->Delete();
numCells->decrRef();
vtkIntArray *vtkTab(vtkIntArray::New());
vtkTab->SetNumberOfComponents(1);
vtkTab->SetName(MEDFileFieldRepresentationLeavesArrays::FAMILY_ID_NODE_NAME);
- AssignDataPointerToVTK<int>(vtkTab,famNodes,noCpyFamNodes);
+ if(noCpyFamNodes)
+ vtkTab->SetArray(famNodes->getPointer(),famNodes->getNbOfElems(),1,VTK_DATA_ARRAY_FREE);
+ else
+ { vtkTab->SetArray(famNodes->getPointer(),famNodes->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); famNodes->accessToMemArray().setSpecificDeallocator(0); }
ret->GetPointData()->AddArray(vtkTab);
vtkTab->Delete();
famNodes->decrRef();
vtkIntArray *vtkTab(vtkIntArray::New());
vtkTab->SetNumberOfComponents(1);
vtkTab->SetName(MEDFileFieldRepresentationLeavesArrays::NUM_ID_NODE_NAME);
- AssignDataPointerToVTK<int>(vtkTab,numNodes,noCpyNumNodes);
+ if(noCpyNumNodes)
+ vtkTab->SetArray(numNodes->getPointer(),numNodes->getNbOfElems(),1,VTK_DATA_ARRAY_FREE);
+ else
+ { vtkTab->SetArray(numNodes->getPointer(),numNodes->getNbOfElems(),0,VTK_DATA_ARRAY_FREE); numNodes->accessToMemArray().setSpecificDeallocator(0); }
ret->GetPointData()->AddArray(vtkTab);
vtkTab->Delete();
numNodes->decrRef();
}
- // Global Node Ids if any ! (In // mode)
- DataArrayInt *gni(ptMML2->retrieveGlobalNodeIdsIfAny());
- if(gni)
- {
- vtkIntArray *vtkTab(vtkIntArray::New());
- vtkTab->SetNumberOfComponents(1);
- vtkTab->SetName(MEDFileFieldRepresentationLeavesArrays::GLOBAL_NODE_ID_NAME);
- AssignDataPointerToVTK<int>(vtkTab,gni,false);
- ret->GetPointData()->AddArray(vtkTab);
- vtkTab->Delete();
- gni->decrRef();
- }
return ret;
}
}
}
}
-
+
std::string MEDFileFieldRepresentationTree::getActiveMeshName() const
{
int dummy0(0),dummy1(0),dummy2(0);
/*!
*
*/
-void MEDFileFieldRepresentationTree::loadMainStructureOfFile(const char *fileName, bool isMEDOrSauv, int iPart, int nbOfParts)
+
+void MEDFileFieldRepresentationTree::loadInMemory(MEDFileFields *fields, MEDFileMeshes *meshes)
{
- if(isMEDOrSauv)
- {
- if((iPart==-1 && nbOfParts==-1) || (iPart==0 && nbOfParts==1))
- {
- _ms=MEDFileMeshes::New(fileName);
- _fields=MEDFileFields::New(fileName,false);//false is important to not read the values
- }
- else
- {
-#ifdef MEDREADER_USE_MPI
- _ms=ParaMEDFileMeshes::New(iPart,nbOfParts,fileName);
- int nbMeshes(_ms->getNumberOfMeshes());
- for(int i=0;i<nbMeshes;i++)
- {
- MEDCoupling::MEDFileMesh *tmp(_ms->getMeshAtPos(i));
- MEDCoupling::MEDFileUMesh *tmp2(dynamic_cast<MEDCoupling::MEDFileUMesh *>(tmp));
- if(tmp2)
- MCAuto<DataArrayInt> tmp3(tmp2->zipCoords());
- }
- _fields=MEDFileFields::LoadPartOf(fileName,false,_ms);//false is important to not read the values
-#else
- std::ostringstream oss; oss << "MEDFileFieldRepresentationTree::loadMainStructureOfFile : request for iPart/nbOfParts=" << iPart << "/" << nbOfParts << " whereas Plugin not compiled with MPI !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
-#endif
- }
- }
- else
- {
- MCAuto<MEDCoupling::SauvReader> sr(MEDCoupling::SauvReader::New(fileName));
- MCAuto<MEDCoupling::MEDFileData> mfd(sr->loadInMEDFileDS());
- _ms=mfd->getMeshes(); _ms->incrRef();
- int nbMeshes(_ms->getNumberOfMeshes());
- for(int i=0;i<nbMeshes;i++)
- {
- MEDCoupling::MEDFileMesh *tmp(_ms->getMeshAtPos(i));
- MEDCoupling::MEDFileUMesh *tmp2(dynamic_cast<MEDCoupling::MEDFileUMesh *>(tmp));
- if(tmp2)
- tmp2->forceComputationOfParts();
- }
- _fields=mfd->getFields();
- if((MEDCoupling::MEDFileFields *)_fields)
- _fields->incrRef();
- }
- if(!((MEDCoupling::MEDFileFields *)_fields))
+ if(!((MEDCoupling::MEDFileFields *)fields))
{
- _fields=BuildFieldFromMeshes(_ms);
+ fields=BuildFieldFromMeshes(meshes);
}
else
{
- AppendFieldFromMeshes(_ms,_fields);
+ AppendFieldFromMeshes(meshes,fields);
}
- _ms->cartesianizeMe();
- _fields->removeFieldsWithoutAnyTimeStep();
- std::vector<std::string> meshNames(_ms->getMeshesNames());
+ meshes->cartesianizeMe();
+ fields->removeFieldsWithoutAnyTimeStep();
+ std::vector<std::string> meshNames(meshes->getMeshesNames());
std::vector< MCAuto<MEDFileFields> > fields_per_mesh(meshNames.size());
for(std::size_t i=0;i<meshNames.size();i++)
{
- fields_per_mesh[i]=_fields->partOfThisLyingOnSpecifiedMeshName(meshNames[i].c_str());
+ fields_per_mesh[i]=fields->partOfThisLyingOnSpecifiedMeshName(meshNames[i].c_str());
}
std::vector< MCAuto<MEDFileAnyTypeFieldMultiTS > > allFMTSLeavesToDisplaySafe;
std::size_t k(0);
for(std::size_t k=0;k<splitByMeshName[j].size();k++)
sbmn[k]=splitByMeshName[j][k];
//getMeshWithName does not return a newly allocated object ! It is a true get* method !
- std::vector< std::vector<MEDFileAnyTypeFieldMultiTS *> > commonSupSplit(MEDFileAnyTypeFieldMultiTS::SplitPerCommonSupport(sbmn,_ms->getMeshWithName(meshNamesLoc[j].c_str()),fsp));
+ std::vector< std::vector<MEDFileAnyTypeFieldMultiTS *> > commonSupSplit(MEDFileAnyTypeFieldMultiTS::SplitPerCommonSupport(sbmn,meshes->getMeshWithName(meshNamesLoc[j].c_str()),fsp));
std::vector< std::vector< MCAuto<MEDFileAnyTypeFieldMultiTS> > > commonSupSplitSafe(commonSupSplit.size());
this->_data_structure[i][j].resize(commonSupSplit.size());
for(std::size_t k=0;k<commonSupSplit.size();k++)
this->computeFullNameInLeaves();
}
+
+void MEDFileFieldRepresentationTree::loadMainStructureOfFile(const char *fileName, bool isMEDOrSauv, int iPart, int nbOfParts)
+{
+ if(isMEDOrSauv)
+ {
+ if((iPart==-1 && nbOfParts==-1) || (iPart==0 && nbOfParts==1))
+ {
+ _ms=MEDFileMeshes::New(fileName);
+ _fields=MEDFileFields::New(fileName,false);//false is important to not read the values
+ }
+ else
+ {
+#ifdef MEDREADER_USE_MPI
+ _ms=ParaMEDFileMeshes::New(iPart,nbOfParts,fileName);
+ int nbMeshes(_ms->getNumberOfMeshes());
+ for(int i=0;i<nbMeshes;i++)
+ {
+ MEDCoupling::MEDFileMesh *tmp(_ms->getMeshAtPos(i));
+ MEDCoupling::MEDFileUMesh *tmp2(dynamic_cast<MEDCoupling::MEDFileUMesh *>(tmp));
+ if(tmp2)
+ MCAuto<DataArrayInt> tmp3(tmp2->zipCoords());
+ }
+ _fields=MEDFileFields::LoadPartOf(fileName,false,_ms);//false is important to not read the values
+#else
+ std::ostringstream oss; oss << "MEDFileFieldRepresentationTree::loadMainStructureOfFile : request for iPart/nbOfParts=" << iPart << "/" << nbOfParts << " whereas Plugin not compiled with MPI !";
+ throw INTERP_KERNEL::Exception(oss.str().c_str());
+#endif
+ }
+ }
+ else
+ {
+ MCAuto<MEDCoupling::SauvReader> sr(MEDCoupling::SauvReader::New(fileName));
+ MCAuto<MEDCoupling::MEDFileData> mfd(sr->loadInMEDFileDS());
+ _ms=mfd->getMeshes(); _ms->incrRef();
+ int nbMeshes(_ms->getNumberOfMeshes());
+ for(int i=0;i<nbMeshes;i++)
+ {
+ MEDCoupling::MEDFileMesh *tmp(_ms->getMeshAtPos(i));
+ MEDCoupling::MEDFileUMesh *tmp2(dynamic_cast<MEDCoupling::MEDFileUMesh *>(tmp));
+ if(tmp2)
+ tmp2->forceComputationOfParts();
+ }
+ _fields=mfd->getFields();
+ if((MEDCoupling::MEDFileFields *)_fields)
+ _fields->incrRef();
+ }
+ //
+ loadInMemory(_fields,_ms);
+}
+
void MEDFileFieldRepresentationTree::removeEmptyLeaves()
{
std::vector< std::vector< std::vector< MEDFileFieldRepresentationLeaves > > > newSD;
