WIP

diff --git a/src/ParaMEDMEM/CommInterface.hxx b/src/ParaMEDMEM/CommInterface.hxx
index 9d96cde93e15658800dc66a46b8707f9f6164c16..967501cdb423fb7b2f18ac8642e0c4a4077ba26b 100644 (file)
--- a/src/ParaMEDMEM/CommInterface.hxx
+++ b/src/ParaMEDMEM/CommInterface.hxx
@@ -81,7 +81,7 @@ namespace MEDCoupling
                   void* recvbuf, int recvcount, MPI_Datatype recvtype,
                   MPI_Comm comm) const { return MPI_Allgather(sendbuf,sendcount, sendtype, recvbuf, recvcount, recvtype, comm); }
     int allGatherV(const void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, const int recvcounts[],
-                   const int displs[], MPI_Datatype recvtype, MPI_Comm comm) { return MPI_Allgatherv(sendbuf,sendcount,sendtype,recvbuf,recvcounts,displs,recvtype,comm); }
+                   const int displs[], MPI_Datatype recvtype, MPI_Comm comm) const { return MPI_Allgatherv(sendbuf,sendcount,sendtype,recvbuf,recvcounts,displs,recvtype,comm); }
     int allToAll(void* sendbuf, int sendcount, MPI_Datatype sendtype,
                  void* recvbuf, int recvcount, MPI_Datatype recvtype,
                  MPI_Comm comm) const { return MPI_Alltoall(sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype, comm); }

diff --git a/src/ParaMEDMEM/ParaUMesh.cxx b/src/ParaMEDMEM/ParaUMesh.cxx
index 0b939fd17ad1266cdb80d74e4814b0255fe23c36..080a9ab4a77770b868ff1b10164b5f777df122fd 100644 (file)
--- a/src/ParaMEDMEM/ParaUMesh.cxx
+++ b/src/ParaMEDMEM/ParaUMesh.cxx
@@ -117,6 +117,25 @@ MCAuto<DataArrayIdType> ParaUMesh::getCellIdsLyingOnNodes(const DataArrayIdType
   return cellIdsFromProcs;
 }
 
+/*!
+ * Generalized AllGather collective communication.
+ * This method send input \a array to all procs.
+ */
+void AllGatherArrays(const CommInterface& ci, MPI_Comm comm, const DataArrayIdType *array, std::unique_ptr<mcIdType[]>& result, std::unique_ptr<mcIdType[]>& resultIndex)
+{
+  int size;
+  ci.commSize(comm,&size);
+  std::unique_ptr<mcIdType[]> nbOfElems(new mcIdType[size]);
+  mcIdType nbOfCellsRequested(array->getNumberOfTuples());
+  ci.allGather(&nbOfCellsRequested,1,MPI_ID_TYPE,nbOfElems.get(),1,MPI_ID_TYPE,comm);
+  mcIdType nbOfCellIdsSum(std::accumulate(nbOfElems.get(),nbOfElems.get()+size,0));
+  result.reset(new mcIdType[nbOfCellIdsSum]);
+  std::unique_ptr<int[]> nbOfElemsInt( CommInterface::ToIntArray<mcIdType>(nbOfElems,size) );
+  std::unique_ptr<int[]> offsetsIn( CommInterface::ComputeOffset(nbOfElemsInt,size) );
+  ci.allGatherV(array->begin(),nbOfCellsRequested,MPI_ID_TYPE,result.get(),nbOfElemsInt.get(),offsetsIn.get(),MPI_ID_TYPE,comm);
+  resultIndex = std::move(nbOfElems);
+}
+
 /*!
  */
 MCAuto<ParaUMesh> ParaUMesh::redistributeCells(const DataArrayIdType *globalCellIds) const
@@ -125,27 +144,33 @@ MCAuto<ParaUMesh> ParaUMesh::redistributeCells(const DataArrayIdType *globalCell
   CommInterface ci;
   int size;
   ci.commSize(comm,&size);
-  std::unique_ptr<mcIdType[]> nbOfElems(new mcIdType[size]),nbOfElems2(new mcIdType[size]);
-  mcIdType nbOfNodeIdsLoc(globalCellIds->getNumberOfTuples());
-  ci.allGather(&nbOfNodeIdsLoc,1,MPI_ID_TYPE,nbOfElems.get(),1,MPI_ID_TYPE,comm);
+  std::unique_ptr<mcIdType[]> nbOfElems(new mcIdType[size]);
+  mcIdType nbOfCellsRequested(globalCellIds->getNumberOfTuples());
+  ci.allGather(&nbOfCellsRequested,1,MPI_ID_TYPE,nbOfElems.get(),1,MPI_ID_TYPE,comm);
   mcIdType nbOfCellIdsSum(std::accumulate(nbOfElems.get(),nbOfElems.get()+size,0));
   std::unique_ptr<mcIdType[]> allGlobalCellIds(new mcIdType[nbOfCellIdsSum]);
   std::unique_ptr<int[]> nbOfElemsInt( CommInterface::ToIntArray<mcIdType>(nbOfElems,size) );
   std::unique_ptr<int[]> offsetsIn( CommInterface::ComputeOffset(nbOfElemsInt,size) );
-  ci.allGatherV(globalCellIds->begin(),nbOfNodeIdsLoc,MPI_ID_TYPE,allGlobalCellIds.get(),nbOfElemsInt.get(),offsetsIn.get(),MPI_ID_TYPE,comm);
+  ci.allGatherV(globalCellIds->begin(),nbOfCellsRequested,MPI_ID_TYPE,allGlobalCellIds.get(),nbOfElemsInt.get(),offsetsIn.get(),MPI_ID_TYPE,comm);
   mcIdType offset(0);
+  // Prepare ParaUMesh parts to be sent : compute for each proc the contribution of current rank.
+  std::vector< MCAuto<DataArrayIdType> > globalCellIdsToBeSent(size),globalNodeIdsToBeSent(size);
+  std::vector< MCAuto<MEDCouplingUMesh> > meshPartsToBeSent(size);
   for(int curRk = 0 ; curRk < size ; ++curRk)
   {
     MCAuto<DataArrayIdType> globalCellIdsOfCurProc(DataArrayIdType::New());
     globalCellIdsOfCurProc->useArray(allGlobalCellIds.get()+offset,false,DeallocType::CPP_DEALLOC,nbOfElems[curRk],1);
     offset += nbOfElems[curRk];
-    // prepare all2all session
+    // the key call is here : compute for rank curRk the cells to be sent
     MCAuto<DataArrayIdType> globalCellIdsCaptured(_cell_global->buildIntersection(globalCellIdsOfCurProc));// OK for the global cellIds
     MCAuto<DataArrayIdType> localCellIdsCaptured(_node_global->findIdForEach(globalCellIdsCaptured->begin(),globalCellIdsCaptured->end()));
     MCAuto<MEDCouplingUMesh> meshPart(_mesh->buildPartOfMySelf(localCellIdsCaptured->begin(),localCellIdsCaptured->end(),true));
     MCAuto<DataArrayIdType> o2n(meshPart->zipCoordsTraducer());// OK for the mesh
     MCAuto<DataArrayIdType> n2o(o2n->invertArrayO2N2N2O(meshPart->getNumberOfNodes()));
     MCAuto<DataArrayIdType> globalNodeIdsPart(_node_global->selectByTupleIdSafe(n2o->begin(),n2o->end())); // OK for the global nodeIds
+    meshPartsToBeSent[curRk] = meshPart;
+    globalCellIdsToBeSent[curRk] = globalCellIdsCaptured;
+    globalNodeIdsToBeSent[curRk] = globalNodeIdsPart;
   }
-  
+  // Receive 
 }