* \param [out] cellIdsNeededToBeRenum cell ids in \b this in which the renumber of nodes should be performed.
* \param [out] cellIdsNotModified cell ids mcIdType \b this that lies on \b otherDimM1OnSameCoords mesh whose connectivity do \b not need to be modified as it is the case for \b cellIdsNeededToBeRenum.
*
- * \warning This method modifies param \b otherDimM1OnSameCoords (for speed reasons).
*/
void MEDCouplingUMesh::findNodesToDuplicate(const MEDCouplingUMesh& otherDimM1OnSameCoords, DataArrayIdType *& nodeIdsToDuplicate,
DataArrayIdType *& cellIdsNeededToBeRenum, DataArrayIdType *& cellIdsNotModified) const
// Checking star-shaped M1 group:
DAInt dt0=DataArrayIdType::New(),dit0=DataArrayIdType::New(),rdt0=DataArrayIdType::New(),rdit0=DataArrayIdType::New();
- MCUMesh meshM2 = otherDimM1OnSameCoords.buildDescendingConnectivity(dt0, dit0, rdt0, rdit0);
+ MCUMesh meshM2 = otherDimM1OnSameCoords.buildDescendingConnectivity(dt0, dit0, rdt0, rdit0); // 2D: a mesh of points, 3D: a mesh of segs
DAInt dsi = rdit0->deltaShiftIndex();
- DAInt idsTmp0 = dsi->findIdsNotInRange(-1, 3);
+ DAInt idsTmp0 = dsi->findIdsNotInRange(-1, 3); // for 2D: if a point is connected to more than 2 segs. For 3D: if a seg is connected to more than two faces.
if(idsTmp0->getNumberOfTuples())
throw INTERP_KERNEL::Exception("MEDFileUMesh::buildInnerBoundaryAlongM1Group: group is too complex: some points (or edges) have more than two connected segments (or faces)!");
dt0=0; dit0=0; rdt0=0; rdit0=0; idsTmp0=0;
- // Get extreme nodes from the group (they won't be duplicated), ie nodes belonging to boundary cells of M1
+ // Get extreme nodes from the group (they won't be duplicated except if they also lie on bound of M0 -- see below),
+ // ie nodes belonging to the boundary "cells" (might be points) of M1
DAInt xtremIdsM2 = dsi->findIdsEqual(1); dsi = 0;
MCUMesh meshM2Part = static_cast<MEDCouplingUMesh *>(meshM2->buildPartOfMySelf(xtremIdsM2->begin(), xtremIdsM2->end(),true));
DAInt xtrem = meshM2Part->computeFetchedNodeIds();
dt0=DataArrayIdType::New(),dit0=DataArrayIdType::New(),rdt0=DataArrayIdType::New(),rdit0=DataArrayIdType::New();
MCUMesh m0desc = buildDescendingConnectivity(dt0, dit0, rdt0, rdit0); dt0=0; dit0=0; rdt0=0;
dsi = rdit0->deltaShiftIndex();
- DAInt boundSegs = dsi->findIdsEqual(1); // boundary segs/faces of the M0 mesh
+ DAInt boundSegs = dsi->findIdsEqual(1); dsi = 0; // boundary segs/faces of the M0 mesh
MCUMesh m0descSkin = static_cast<MEDCouplingUMesh *>(m0desc->buildPartOfMySelf(boundSegs->begin(),boundSegs->end(), true));
DAInt fNodes = m0descSkin->computeFetchedNodeIds();
- // In 3D, some points on the boundary of M0 still need duplication:
+ // In 3D, some points on the boundary of M0 will NOT be duplicated (where as in 2D, points on the boundary of M0 are always duplicated)
+ // Think of a partial (plane) crack in a cube: the points at the tip of the crack and not located inside the volume of the cube are not duplicated
+ // although they are technically on the skin of the cube.
DAInt notDup = 0;
if (getMeshDimension() == 3)
{
DAInt dnu1=DataArrayIdType::New(), dnu2=DataArrayIdType::New(), dnu3=DataArrayIdType::New(), dnu4=DataArrayIdType::New();
- MCUMesh m0descSkinDesc = m0descSkin->buildDescendingConnectivity(dnu1, dnu2, dnu3, dnu4);
+ MCUMesh m0descSkinDesc = m0descSkin->buildDescendingConnectivity(dnu1, dnu2, dnu3, dnu4); // all segments of the skin of the 3D (M0) mesh
dnu1=0;dnu2=0;dnu3=0;dnu4=0;
DataArrayIdType * corresp=0;
meshM2->areCellsIncludedIn(m0descSkinDesc,2,corresp);
corresp->decrRef();
if (validIds->getNumberOfTuples())
{
+ // Build the set of segments which are: in the desc mesh of the skin of the 3D mesh (M0) **and** in the desc mesh of the M1 group:
MCUMesh m1IntersecSkin = static_cast<MEDCouplingUMesh *>(m0descSkinDesc->buildPartOfMySelf(validIds->begin(), validIds->end(), true));
+ // Its boundary nodes should no be duplicated (this is for example the tip of the crack inside the cube described above)
DAInt notDuplSkin = m1IntersecSkin->findBoundaryNodes();
DAInt fNodes1 = fNodes->buildSubstraction(notDuplSkin);
- notDup = xtrem->buildSubstraction(fNodes1);
+
+ // Also, in this (segment) mesh, nodes connected to more than 3 segs should not be dup either (singular points - see testBuildInnerBoundary6())
+ dt0=DataArrayIdType::New(),dit0=DataArrayIdType::New(),rdt0=DataArrayIdType::New(),rdit0=DataArrayIdType::New();
+ MCUMesh meshM2Desc = meshM2->buildDescendingConnectivity(dt0, dit0, rdt0, rdit0); dt0=0; dit0=0; rdt0=0; // a mesh made of node cells
+ dsi = rdit0->deltaShiftIndex();
+ DAInt singPoints = dsi->findIdsNotInRange(-1,4); // points connected to (strictly) more than 3 segments
+ const mcIdType *cc = meshM2Desc->getNodalConnectivity()->begin(), *ccI = meshM2Desc->getNodalConnectivityIndex()->begin();
+ mcIdType * singPointsP = singPoints->rwBegin();
+ for (mcIdType j=0; j < singPoints->getNumberOfTuples(); j++) // replace ids in singPoints by real coordinate index (was index of cells in notDuplSkin)
+ {
+ mcIdType nodeCellIdx = singPointsP[j];
+ singPointsP[j] = cc[ccI[nodeCellIdx]+1]; // +1 to skip type
+ }
+ DAInt fNodes2 = fNodes1->buildSubstraction(singPoints);
+ notDup = xtrem->buildSubstraction(fNodes2);
}
else
notDup = xtrem->buildSubstraction(fNodes);
m_bis0.checkDeepEquivalOnSameNodesWith(mfu.getMeshAtLevel(-1), 2, 9.9999999)
pass
+ @WriteInTmpDir
+ def testBuildInnerBoundary6(self):
+ """ 3D test where the crack has a funny shape with a singular point (i.e. two faces of the M1 group are only connected by one point, not a full segment)
+ The singular point was wrongly duplicated.
+ """
+ coo = DataArrayDouble([(-1.38778e-17,0.226,0),(-1.38778e-17,-1.38778e-17,0),(0.226,0.226,0),(0.226,-1.38778e-17,0),(0.452,0.226,0),(0.452,-1.38778e-17,0),
+ (-1.38778e-17,0.452,0),(0.226,0.452,0),(0.452,0.452,0),(-1.38778e-17,0.226,0.25),(0.226,0.226,0.25),(0.226,-1.38778e-17,0.25),(-1.38778e-17,-1.38778e-17,0.25),
+ (-1.38778e-17,0.226,0.779375),(0.226,0.226,0.779375),(0.226,-1.38778e-17,0.779375),(-1.38778e-17,-1.38778e-17,0.779375),(-1.38778e-17,0.226,1.30875),
+ (0.226,0.226,1.30875),(0.226,-1.38778e-17,1.30875),(-1.38778e-17,-1.38778e-17,1.30875),(0.452,0.226,0.25),(0.452,-1.38778e-17,0.25),(0.452,0.226,0.779375),
+ (0.452,-1.38778e-17,0.779375),(0.452,0.226,1.30875),(0.452,-1.38778e-17,1.30875),(-1.38778e-17,0.452,0.25),(0.226,0.452,0.25),(-1.38778e-17,0.452,0.779375),
+ (0.226,0.452,0.779375),(-1.38778e-17,0.452,1.30875),(0.226,0.452,1.30875),(0.452,0.452,0.25),(0.452,0.452,0.779375),(0.452,0.452,1.30875),(0.146,0.226,0.779375),
+ (0.146,-1.38778e-17,0.779375),(0.146,0.226,1.30875),(0.146,-1.38778e-17,1.30875),(0.146,0.452,0.779375),(0.146,0.452,1.30875)])
+ c0 = [18, 0, 2, 3, 1, 9, 10, 11, 12, 18, 9, 10, 11, 12, 13, 36, 37, 16, 18, 13, 36, 37, 16, 17, 38, 39, 20, 18, 2, 4, 5, 3, 10, 21, 22, 11, 18, 10, 21, 22, 11, 14, 23, 24, 15,
+ 18, 14, 23, 24, 15, 18, 25, 26, 19, 18, 6, 7, 2, 0, 27, 28, 10, 9, 18, 27,
+ 28, 10, 9, 29, 40, 36, 13, 18, 29, 40, 36, 13, 31, 41, 38, 17, 18, 7, 8, 4, 2, 28, 33, 21, 10, 18, 28, 33, 21, 10, 30, 34, 23, 14, 18, 30, 34, 23, 14, 32, 35, 25, 18]
+ cI0 = [0, 9, 18, 27, 36, 45, 54, 63, 72, 81, 90, 99, 108]
+ m3 = MEDCouplingUMesh("3D", 3)
+ m3.setCoords(coo)
+ m3.setConnectivity(DataArrayInt(c0), DataArrayInt(cI0))
+ m3.checkConsistency()
+ m2, _, _, _, _ = m3.buildDescendingConnectivity()
+ grpIds = DataArrayInt([7,12,22,27]); grpIds.setName("group")
+ mfu = MEDFileUMesh()
+ mfu.setMeshAtLevel(0, m3)
+ mfu.setMeshAtLevel(-1, m2)
+ mfu.setGroupsAtLevel(-1, [grpIds])
+ nNod = m3.getNumberOfNodes()
+ nodesDup, cells1, cells2 = mfu.buildInnerBoundaryAlongM1Group("group")
+ m3_bis = mfu.getMeshAtLevel(0)
+ m3_bis.checkConsistency()
+ m2_bis = mfu.getMeshAtLevel(-1)
+ m2_bis.checkConsistency()
+ self.assertEqual(nNod+8, mfu.getNumberOfNodes())
+ self.assertEqual(nNod+8, m3_bis.getNumberOfNodes())
+ self.assertEqual(nNod+8, m2_bis.getNumberOfNodes())
+ self.assertEqual([13, 14, 17, 18, 23, 25, 36, 38], nodesDup.getValues())
+ self.assertEqual(m3_bis.getCoords()[nodesDup].getValues(), m3_bis.getCoords()[nNod:].getValues())
+ self.assertEqual(set([1, 2, 4, 5]), set(cells1.getValues()))
+ self.assertEqual(set([7, 8, 10, 11]), set(cells2.getValues()))
+ self.assertEqual([7, 12, 22, 27],mfu.getGroupArr(-1,"group").getValues())
+ self.assertEqual([56, 57, 58, 59],mfu.getGroupArr(-1,"group_dup").getValues()) # here only one cell has been duplicated
+ m_desc, _, _, _, _ = m3_bis.buildDescendingConnectivity()
+ m_desc.checkDeepEquivalOnSameNodesWith(m2_bis, 2, 9.9999)
+ pass
+
@WriteInTmpDir
def testBasicConstructors(self):
GeneratePyfile18(self)
