click : 'native'
cmake : 'native'
cppunit : 'native'
+ cminpack: '1.3.6'
cycler : 'native'
Cython : 'native'
dateutil : 'native'
doxygen : 'native'
eigen : 'native'
embree : '3.12.2'
+ FMILibrary : '2.0.3'
+ fftw : 'native'
freeimage : 'native'
freetype : 'native'
gl2ps : 'native'
omniORBpy : '4.2.3'
opencv : 'native'
openVKL : '0.11.0'
- openturns: '1.16'
+ openturns: '1.17'
ospray : '2.4.0'
packaging : 'native'
+ pandas : 'native'
ParaView : '5.9.0'
petsc : {tag : '3.15.0', section: 'version_3_15_0'}
Pillow : 'native'
# 'native' not exists : freeCAD part but not delivered with it from package handler
planegcs : '0.18-3cb6890'
psutil : 'native'
+ PyFMI : '2.5'
Pygments : 'native'
pyparsing : 'native'
PyQt : 'native'
sphinxintl: 'native'
sphinx_rtd_theme : 'native'
StaticMeshPlugin: '5.8.0'
+ statsmodels : 'native'
swig : 'native'
salome_system : 'native'
tbb : 'native'
'PYHELLO'
'EFICAS'
'EFICAS_TOOLS'
- 'PY2CPP'
- 'ADAO'
- 'ADAO_INTERFACE'
+ 'PY2CPP'
+ 'ADAO'
+ 'ADAO_INTERFACE'
'PARAVISADDONS'
'CEATESTBASE' : {tag: 'SalomeV9'}
}
}
{
# FD 34 qt5 package is qt5-qtbase-devel.
-
__condition__ : "VARS.dist in ['FD34']"
'APPLICATION.products.omniORB' : '4.2.4'
'APPLICATION.products.omniORBpy': '4.2.4'
'PRODUCTS.qt.default.system_info.rpm' : []
'PRODUCTS.qt.default.system_info.rpm_dev' : ["qt5-qtbase-devel"]
}
+ {
+ __condition__ : "VARS.dist in ['FD32']"
+ 'PRODUCTS.PyFMI.version_2_5.properties.pip' : "no"
+ 'PRODUCTS.PyFMI.version_2_5.compil_script' : "PyFMI-2.5.sh"
+ }
+ {
+ __condition__ : "VARS.dist in ['DB10', 'UB20.04']"
+ 'APPLICATION.products.cminpack': 'native'
+ 'PRODUCTS.PyFMI.version_2_5.properties.pip' : "no"
+ 'PRODUCTS.PyFMI.version_2_5.compil_script' : "PyFMI-2.5.sh"
+ }
+ {
+ __condition__ : "VARS.dist in ['CO8']"
+ 'APPLICATION.products.statsmodels' : '0.6.1' # will fail otherwise - 0.8.0 does not match Cython.
+ 'APPLICATION.products.cminpack': '1.3.6'
+ 'PRODUCTS.PyFMI.version_2_5.properties.pip' : "no"
+ 'PRODUCTS.PyFMI.version_2_5.compil_script' : "PyFMI-2.5.sh"
+ 'PRODUCTS.statsmodels.version_0_6_1.properties.pip' : "no"
+ 'PRODUCTS.statsmodels.version_0_6_1.compil_script' : "statsmodels-0.6.1.sh"
+ }
]
chardet : '3.0.4'
click : '6.7'
cmake : '3.12.1'
+ cminpack: '1.3.6'
cppunit : '1.13.2'
cycler : '0.10.0'
- Cython : '0.25.2'
- dateutil : '2.4.2'
+ Cython : '0.29.12'
+ dateutil : '2.6.1'
docutils : '0.12'
doxygen : '1.8.14'
eigen : '3.3.4'
embree : '3.12.2'
+ FMILibrary : '2.0.3'
freeimage : '3.16.0'
freetype : '2.9.1'
gcc : '8.5.0'
omniORB : '4.2.2'
omniORBpy : '4.2.2'
opencv : '3.2.0'
- openturns: '1.16'
+ openturns: '1.17'
openVKL: '0.11.0'
ospray : '2.4.0'
packaging : '17.1'
+ pandas : '0.25.2'
+ patsy : '0.5.2'
ParaView : '5.9.0'
petsc : {tag : '3.15.0', section: 'version_3_15_0'}
Pillow : '7.1.1'
planegcs : '0.18-3cb6890'
psutil : '5.7.2'
+ PyFMI : '2.5'
Pygments : '2.0.2'
pyparsing : '2.0.3'
PyQt : '5.15.3'
#PyQtChart : '5.9'
pyreadline : '2.0'
Python : '3.6.5'
- pytz : '2015.7'
+ pytz : '2017.2'
qt : '5.12.10'
qwt : '6.1.2'
requests : '2.19.1'
sphinx_rtd_theme : '0.4.3'
sphinxintl: '0.9.10'
StaticMeshPlugin: '5.8.0'
+ statsmodels: '0.8.0'
swig : '3.0.12'
tbb : '2019_U8'
tcl : '8.6.0'
'cgns',
'Pygments'
]
- opt_depend : ['openmpi', 'ospray','tbb']
+ opt_depend : ['openmpi', 'ospray','tbb', 'openturns']
build_depend : ["cmake"]
source_dir : $APPLICATION.workdir + $VARS.sep + 'SOURCES' + $VARS.sep + $name
build_dir : $APPLICATION.workdir + $VARS.sep + 'BUILD' + $VARS.sep + $name
pip : "yes"
}
}
+
+version_2_5 :
+{
+ properties:
+ {
+ incremental : "yes"
+ pip : "yes"
+ }
+}
{
name : "cminpack"
build_source : "cmake"
- cmake_options : " -DUSE_BLAS=ON -DUSE_FPIC=ON -DBUILD_SHARED_LIBS=ON"
+ cmake_options : " -DUSE_BLAS=ON -DUSE_FPIC=ON -DBUILD_SHARED_LIBS=ON -DCMAKE_INSTALL_LIBDIR:STRING=lib "
compil_script : $name + $VARS.scriptExtension
get_source : "archive"
+ system_info :
+ {
+ rpm : ['cminpack']
+ rpm_dev : []
+ apt : ['libcminpack1']
+ apt_dev : ['libcminpack-dev']
+ }
environ :
{
env_script : $name + ".py"
version_1_3_6 :
{
+ build_source : "script"
+ compil_script: 'cminpack-1.3.6.sh'
patches : ['cminpack-1.3.6-cblas.patch']
}
\ No newline at end of file
CMAKE_OPTIONS="${CMAKE_OPTIONS} -DHDF5_DIR:PATH=${HDF5_ROOT_DIR}/share/cmake/hdf5"
CMAKE_OPTIONS="${CMAKE_OPTIONS} -DHDF5_USE_STATIC_LIBRARIES:BOOL=OFF"
CMAKE_OPTIONS="${CMAKE_OPTIONS} -DHDF5_ROOT:PATH=${HDF5_ROOT_DIR}"
-
+CMAKE_OPTIONS="${CMAKE_OPTIONS} -DHDF5_hdf5_LIBRARY_RELEASE=${HDF5_ROOT_DIR}/lib"
+CMAKE_OPTIONS="${CMAKE_OPTIONS} -DHDF5_hdf5_hl_LIBRARY_RELEASE=${HDF5_ROOT_DIR}/lib/libhdf5_hl.so"
+CMAKE_OPTIONS="${CMAKE_OPTIONS} -DHDF5_hdf5_CXX_LIBRARY_RELEASE=${HDF5_ROOT_DIR}/lib/libhdf5_cxx.so"
+CMAKE_OPTIONS="${CMAKE_OPTIONS} -DHDF5_HL_LIBRARY=${HDF5_ROOT_DIR}/lib/libhdf5_hl.so"
+CMAKE_OPTIONS="${CMAKE_OPTIONS} -DHDF5_C_INCLUDE_DIR=${HDF5_ROOT_DIR}/include"
### CGNS
CMAKE_OPTIONS="${CMAKE_OPTIONS} -DVTK_MODULE_USE_EXTERNAL_ParaView_cgns:BOOL=ON"
if [ "$CGNS_ROOT_DIR" != "/usr" ]
# allow additional plugins
CMAKE_OPTIONS="${CMAKE_OPTIONS} -DVTK_ALL_NEW_OBJECT_FACTORY:BOOL=ON"
+# Openturns:
+if [ -n "$OPENTURNS_VERSION" ]; then
+ function version_ge() { test "$(echo "$@" | tr " " "\n" | sort -rV | head -n 1)" == "$1"; }
+ if version_ge $OPENTURNS_VERSION "1.17" ; then
+ echo "INFO: Adding OpenTURNS version ${OPENTURNS_VERSION} support..."
+ CMAKE_OPTIONS="${CMAKE_OPTIONS} -DPARAVIEW_ENABLE_OPENTURNS=ON"
+ CMAKE_OPTIONS="${CMAKE_OPTIONS} -DOpenTURNS_DIR=$OPENTURNS_ROOT_DIR/lib/cmake/openturns"
+ else
+ echo "WARNING: OpenTURNS ${OPENTURNS_VERSON} is not supported with current ParaView build..."
+ fi
+else
+ echo "WARNING: No OpenTURNS environment variable is found..."
+fi
+
echo
echo "*** cmake" ${CMAKE_OPTIONS}
cmake ${CMAKE_OPTIONS} $SOURCE_DIR
--- /dev/null
+#!/bin/bash
+
+#!/bin/bash
+
+echo "##########################################################################"
+echo "PyFMI " $VERSION
+echo "##########################################################################"
+
+echo "*** build in SOURCE directory"
+
+
+cd $BUILD_DIR
+cp -R $SOURCE_DIR/* .
+
+rm -f $BUILD_DIR/src/pyfmi/*.c
+mkdir -p $PRODUCT_INSTALL/lib/python${PYTHON_VERSION:0:3}/site-packages
+export PATH=$(pwd)/bin:$PATH
+export PYTHONPATH=$(pwd):$PYTHONPATH
+export PYTHONPATH=${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION:0:3}/site-packages:$PYTHONPATH
+
+echo
+echo "*** build with $PYTHONBIN"
+$PYTHONBIN setup.py build
+if [ $? -ne 0 ]
+then
+ echo "ERROR on build"
+ exit 2
+fi
+
+echo
+echo "*** install with $PYTHONBIN"
+$PYTHONBIN setup.py install --prefix=$PRODUCT_INSTALL --fmil-home=$PRODUCT_INSTALL
+if [ $? -ne 0 ]
+then
+ echo "ERROR on install"
+ exit 3
+fi
+
+echo
+echo "########## END"
--- /dev/null
+#!/bin/bash
+
+echo "##########################################################################"
+echo "Cminpack " $VERSION
+echo "##########################################################################"
+
+if [ -n "$MPI_ROOT_DIR" ]
+then
+ echo "WARNING: setting CC and CXX environment variables and target MPI wrapper"
+ export CC=${MPI_ROOT_DIR}/bin/mpicc
+ export CXX=${MPI_ROOT_DIR}/bin/mpicxx
+fi
+
+CMAKE_OPTIONS=""
+CMAKE_OPTIONS+=" -DCMAKE_INSTALL_PREFIX:STRING=${PRODUCT_INSTALL}"
+CMAKE_OPTIONS+=" -DCMAKE_BUILD_TYPE:STRING=Release"
+CMAKE_OPTIONS+=" -DUSE_BLAS=ON"
+CMAKE_OPTIONS+=" -DUSE_FPIC=ON"
+CMAKE_OPTIONS+=" -DBUILD_EXAMPLES=OFF"
+###CMAKE_OPTIONS+=" -DBUILD_SHARED_LIBS=ON"
+CMAKE_OPTIONS+=" -DCMAKE_INSTALL_LIBDIR:STRING=lib"
+# strangely on CentOS 8 - CMake fails to find CBLAS include directory
+if [[ $DIST_NAME == "CO" && $DIST_VERSION == "8" && $APPLICATION_NAME =~ native && -d /usr/include/cblas ]]; then
+ CMAKE_OPTIONS+=" -DCBLAS_INCLUDE_DIRS=/usr/include/cblas "
+fi
+
+echo
+echo "*** cmake" $CMAKE_OPTIONS
+cmake $CMAKE_OPTIONS $SOURCE_DIR
+if [ $? -ne 0 ]
+then
+ echo "ERROR on cmake"
+ exit 1
+fi
+
+echo
+echo "*** make" $MAKE_OPTIONS
+make $MAKE_OPTIONS
+if [ $? -ne 0 ]
+then
+ echo "ERROR on make"
+ exit 2
+fi
+
+echo
+echo "*** make install"
+make install
+if [ $? -ne 0 ]
+then
+ echo "ERROR on make install"
+ exit 3
+fi
+
+echo
+echo "*** check installation"
+
+if [ -d "${PRODUCT_INSTALL}/lib64" ]
+then
+ echo "WARNING: renaming lib64 to lib..."
+ mv ${PRODUCT_INSTALL}/lib64 ${PRODUCT_INSTALL}/lib
+fi
+
+echo
+echo "########## END"
CMAKE_OPTIONS="${CMAKE_OPTIONS} -DCMAKE_C_FLAGS=-fPIC"
CMAKE_OPTIONS="${CMAKE_OPTIONS} -DUSE_OPTIMIZED_BLAS=OFF"
CMAKE_OPTIONS="${CMAKE_OPTIONS} -DCBLAS=ON"
+CMAKE_OPTIONS="${CMAKE_OPTIONS} -DBLAS=ON"
CMAKE_OPTIONS="${CMAKE_OPTIONS} -DLAPACKE=ON"
echo
--- /dev/null
+#!/bin/bash
+
+echo "##########################################################################"
+echo "openturns" $VERSION
+echo "##########################################################################"
+
+if [ -n "$MPI_ROOT_DIR" ]
+then
+ echo "WARNING: setting CC and CXX environment variables and target MPI wrapper"
+ export CC=${MPI_ROOT_DIR}/bin/mpicc
+ export CXX=${MPI_ROOT_DIR}/bin/mpicxx
+fi
+
+CMAKE_OPTIONS=""
+CMAKE_OPTIONS+=" -DCMAKE_INSTALL_PREFIX:STRING=${PRODUCT_INSTALL}"
+CMAKE_OPTIONS+=" -DCMAKE_BUILD_TYPE:STRING=Release"
+CMAKE_OPTIONS+=" -DPYTHON_EXECUTABLE=${PYTHONBIN}"
+CMAKE_OPTIONS+=" -DSWIG_EXECUTABLE=${SWIG_ROOT_DIR}/bin/swig"
+
+echo
+echo "*** cmake" $CMAKE_OPTIONS
+cmake $CMAKE_OPTIONS $SOURCE_DIR
+if [ $? -ne 0 ]
+then
+ echo "ERROR on cmake"
+ exit 1
+fi
+
+echo
+echo "*** make" $MAKE_OPTIONS
+make $MAKE_OPTIONS
+if [ $? -ne 0 ]
+then
+ echo "ERROR on make"
+ exit 2
+fi
+
+echo
+echo "*** make install"
+make install
+if [ $? -ne 0 ]
+then
+ echo "ERROR on make install"
+ exit 3
+fi
+
+echo
+echo "*** check installation"
+
+if [ -d "${PRODUCT_INSTALL}/lib64" ]
+then
+ mv ${PRODUCT_INSTALL}/lib64/* ${PRODUCT_INSTALL}/lib
+ rmdir ${PRODUCT_INSTALL}/lib64
+fi
+
+export PYTHONPATH=${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION}/site-packages:${PYTHONPATH}
+export LD_LIBRARY_PATH=${PRODUCT_INSTALL}/lib:${LD_LIBRARY_PATH}
+chmod +x ${SOURCE_DIR}/python/test/t_features.py
+${SOURCE_DIR}/python/test/t_features.py
+if [ $? -ne 0 ]
+then
+ echo "ERROR testing Openturns features...."
+ exit 4
+fi
+
+echo
+echo "########## END"
--- /dev/null
+#!/bin/bash
+
+echo "##########################################################################"
+echo "openturns" $VERSION
+echo "##########################################################################"
+
+# we don't install in python directory -> modify environment as described in INSTALL file
+mkdir -p $PRODUCT_INSTALL/lib/python${PYTHON_VERSION:0:3}/site-packages
+export PATH=$(pwd)/bin:$PATH
+export PYTHONPATH=$(pwd):$PYTHONPATH
+export PYTHONPATH=${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION:0:3}/site-packages:$PYTHONPATH
+
+if [ -n "$MPI_ROOT_DIR" ]
+then
+ echo "WARNING: setting CC and CXX environment variables and target MPI wrapper"
+ export CC=${MPI_ROOT_DIR}/bin/mpicc
+ export CXX=${MPI_ROOT_DIR}/bin/mpicxx
+fi
+
+CMAKE_OPTIONS=""
+CMAKE_OPTIONS+=" -DCMAKE_INSTALL_PREFIX:STRING=${PRODUCT_INSTALL}"
+CMAKE_OPTIONS+=" -DCMAKE_BUILD_TYPE:STRING=Release"
+CMAKE_OPTIONS+=" -DPYTHON_EXECUTABLE=${PYTHONBIN}"
+CMAKE_OPTIONS+=" -DSWIG_EXECUTABLE=${SWIG_ROOT_DIR}/bin/swig"
+
+if [ -n "$TBB_ROOT_DIR" ] && [ "${TBB_ROOT_DIR}" != "/usr" ]; then
+ CMAKE_OPTIONS+=" -DTBB_ROOT_DIR=${TBB_ROOT_DIR}"
+fi
+
+### libxml2 settings
+if [ -n "$LIBXML2_ROOT_DIR" ] && [ "${LIBXML2_ROOT_DIR}" != "/usr" ]; then
+ CMAKE_OPTIONS+=" -DLIBXML2_INCLUDE_DIR:STRING=${LIBXML2_ROOT_DIR}/include/libxml2"
+ CMAKE_OPTIONS+=" -DLIBXML2_LIBRARIES:STRING=${LIBXML2_ROOT_DIR}/lib/libxml2.so"
+ CMAKE_OPTIONS+=" -DLIBXML2_XMLLINT_EXECUTABLE=${LIBXML2_ROOT_DIR}/bin/xmllint"
+fi
+
+# HDF5
+if [ -n "$HDF5_ROOT_DIR" ] && [ "${HDF5_ROOT_DIR}" != "/usr" ]; then
+ CMAKE_OPTIONS+=" -DHDF5_DIR:PATH=${HDF5_ROOT_DIR}/share/cmake/hdf5"
+ CMAKE_OPTIONS+=" -DHDF5_USE_STATIC_LIBRARIES:BOOL=OFF"
+ CMAKE_OPTIONS+=" -DHDF5_ROOT:PATH=${HDF5_ROOT_DIR}"
+ CMAKE_OPTIONS+=" -DHDF5_hdf5_LIBRARY_RELEASE=${HDF5_ROOT_DIR}/lib"
+ CMAKE_OPTIONS+=" -DHDF5_hdf5_hl_LIBRARY_RELEASE=${HDF5_ROOT_DIR}/lib/libhdf5_hl.so"
+ CMAKE_OPTIONS+=" -DHDF5_HL_LIBRARY=${HDF5_ROOT_DIR}/lib/libhdf5_hl.so"
+ CMAKE_OPTIONS+=" -DHDF5_C_INCLUDE_DIR=${HDF5_ROOT_DIR}/include"
+fi
+
+# CMINPACK
+if [ -n "$CMINPACK_ROOT_DIR" ] && [ "${CMINPACK_ROOT_DIR}" != "/usr" ]; then
+ CMAKE_OPTIONS+=" -DCMINPACK_ROOT_DIR=${CMINPACK_ROOT_DIR}"
+ CMAKE_OPTIONS+=" -DCMINPACK_INCLUDE_DIR=${CMINPACK_ROOT_DIR}/include/cminpack-1"
+ CMAKE_OPTIONS+=" -DCMINPACK_LIBRARY=$CMINPACK_ROOT_DIR/lib/libcminpack_s.a"
+else
+ CMAKE_OPTIONS+=" -DCMINPACK_ROOT_DIR=${CMINPACK_ROOT_DIR}"
+ CMAKE_OPTIONS+=" -DCMINPACK_INCLUDE_DIR=${CMINPACK_ROOT_DIR}/include/cminpack-1"
+fi
+
+# Blas/Lapack
+if [ -n "$LAPACK_ROOT_DIR" ] && [ "${LAPACK_ROOT_DIR}" != "/" ]; then
+ CMAKE_OPTIONS+=" -DLAPACK_DIR=${LAPACK_ROOT_DIR}/lib/cmake/lapack-3.8.0"
+ CMAKE_OPTIONS+=" -DCBLAS_DIR=${LAPACK_ROOT_DIR}/lib/cmake/cblas-3.8.0"
+ CMAKE_OPTIONS+=" -DCBLAS_LIBRARIES=$LAPACK_ROOT_DIR/lib/libcblas.so"
+ CMAKE_OPTIONS+=" -DBLAS_LIBRARIES=$LAPACK_ROOT_DIR/lib/libblas.so"
+fi
+
+if [[ $DIST_NAME == "CO" && $DIST_VERSION == "8" && $APPLICATION_NAME =~ native && -d /usr/lib64/libcblas.so && -d /usr/lib64/libblas.so ]]; then
+ CMAKE_OPTIONS+=" -DCBLAS_LIBRARIES=/usr/lib64/libcblas.so"
+ CMAKE_OPTIONS+=" -DBLAS_LIBRARIES=/usr/lib64/libblas.so"
+fi
+
+### libxml2 settings
+if [ -n "$LIBXML2_ROOT_DIR" ] && [ "${LIBXML2_ROOT_DIR}" != "/usr" ]; then
+ CMAKE_OPTIONS+=" -DLIBXML2_INCLUDE_DIR:STRING=${LIBXML2_ROOT_DIR}/include/libxml2"
+ CMAKE_OPTIONS+=" -DLIBXML2_LIBRARIES:STRING=${LIBXML2_ROOT_DIR}/lib/libxml2.so"
+ CMAKE_OPTIONS+=" -DLIBXML2_XMLLINT_EXECUTABLE=${LIBXML2_ROOT_DIR}/bin/xmllint"
+fi
+
+## nlopt
+if [ -n "$NLOPT_ROOT_DIR" ] && [ "${NLOPT_ROOT_DIR}" != "/usr" ]; then
+ CMAKE_OPTIONS+=" -DNLOPT_INCLUDE_DIRS:STRING=${NLOPT_ROOT_DIR}/include"
+ CMAKE_OPTIONS+=" -DNLOPT_LIBRARIES:STRING=${NLOPT_ROOT_DIR}/lib"
+ CMAKE_OPTIONS+=" -DNLOPT_DIR:STRING=${NLOPT_ROOT_DIR}"
+fi
+
+echo
+echo "*** cmake" $CMAKE_OPTIONS
+mkdir -p $BUILD_DIR/openturns
+cd $BUILD_DIR/openturns
+cmake $CMAKE_OPTIONS $SOURCE_DIR/openturns-1.17
+if [ $? -ne 0 ]
+then
+ echo "ERROR on cmake"
+ exit 1
+fi
+
+echo
+echo "*** make" $MAKE_OPTIONS
+make $MAKE_OPTIONS
+if [ $? -ne 0 ]
+then
+ echo "ERROR on make"
+ exit 2
+fi
+
+echo
+echo "*** make install"
+make install
+if [ $? -ne 0 ]
+then
+ echo "ERROR on make install"
+ exit 3
+fi
+
+echo
+echo "*** check installation"
+
+if [ -d "${PRODUCT_INSTALL}/lib64" ]
+then
+ mv ${PRODUCT_INSTALL}/lib64/* ${PRODUCT_INSTALL}/lib
+ rmdir ${PRODUCT_INSTALL}/lib64
+fi
+
+export PYTHONPATH=${PRODUCT_INSTALL}/lib/python${PYTHON_VERSION}/site-packages:${PYTHONPATH}
+export LD_LIBRARY_PATH=${PRODUCT_INSTALL}/lib:${LD_LIBRARY_PATH}
+chmod +x ${SOURCE_DIR}/openturns-1.17/python/test/t_features.py
+${SOURCE_DIR}/openturns-1.17/python/test/t_features.py
+if [ $? -ne 0 ]
+then
+ echo "ERROR testing Openturns features...."
+ exit 4
+fi
+
+LD_LIBRARY_PATH_REF=${LD_LIBRARY_PATH}
+if [[ -d "$SOURCE_DIR/otfftw-0.11" ]]; then
+
+ declare -A OTC
+ OTC["otagrum"]="0.4"
+ OTC["otfftw"]="0.11"
+ OTC["otmixmod"]="0.12"
+ OTC["otmorris"]="0.10"
+ OTC["otpmml"]="1.11"
+ OTC["otrobopt"]="0.9"
+ OTC["otsubsetinverse"]="1.8"
+ OTC["otsvm"]="0.10"
+
+ for k in ${!OTC[@]};
+ do
+ echo
+ echo "*** C O M P O N E N T : $k-${OTC[$k]} "
+ if [[ $k == "otagrum" ]]; then
+ echo "WARNING: skipping $k.."
+ continue
+ fi
+
+ cd $BUILD_DIR
+ mkdir ${BUILD_DIR}/$k
+ cd ${BUILD_DIR}/$k
+ CMAKE_EXTRA_OPTIONS=
+ if [[ $k == "otmixmod" ]]; then
+ CMAKE_EXTRA_OPTIONS+=" -DBUILD_DOC=OFF"
+ CMAKE_EXTRA_OPTIONS+=" -DSOURCEFILES=$SOURCE_DIR/$k-${OTC[$k]}"
+ elif [[ $k == "otsubsetinverse" ]]; then
+ CMAKE_EXTRA_OPTIONS+=" -DOPENTURNS_HOME=$PRODUCT_INSTALL"
+ CMAKE_EXTRA_OPTIONS+=" -DCMAKE_SKIP_INSTALL_RPATH:BOOL=ON"
+ CMAKE_EXTRA_OPTIONS+=" -DUSE_SPHINX=OFF"
+ elif [[ $k == "otfftw" ]]; then
+ CMAKE_EXTRA_OPTIONS+=" -DBUILD_DOC=OFF" # needs extra latex modules on CentOS 7
+ elif [[ $k == "otpmml" ]]; then
+ CMAKE_EXTRA_OPTIONS+=" -DBUILD_DOC=OFF" # needs extra latex modules on CentOS 7
+ fi
+
+ echo
+ echo "*** cmake " $CMAKE_OPTIONS ${CMAKE_EXTRA_OPTIONS} $SOURCE_DIR/$k-${OTC[$k]}
+ cmake $CMAKE_OPTIONS ${CMAKE_EXTRA_OPTIONS} $SOURCE_DIR/$k-${OTC[$k]}
+ if [ $? -ne 0 ]
+ then
+ echo "ERROR on cmake"
+ exit 1
+ fi
+
+ echo
+ echo "*** make" $MAKE_OPTIONS
+ make $MAKE_OPTIONS
+ if [ $? -ne 0 ]
+ then
+ echo "ERROR on make"
+ exit 2
+ fi
+
+ echo
+ echo "*** make install"
+ make install
+ if [ $? -ne 0 ]
+ then
+ echo "ERROR on make install"
+ exit 3
+ fi
+ done
+ declare -A OTP
+ OTP["otfmi"]="0.11"
+ OTP["otpod"]="0.6.7"
+ OTP["otwrapy"]="0.10"
+ for k in ${!OTP[@]};
+ do
+ echo
+ echo "*** C O M P O N E N T : $k-${OTP[$k]} "
+
+ if [[ $DIST_NAME == "CO" && $DIST_VERSION == "8" && $APPLICATION_NAME =~ native && $k == "otpod" ]]; then
+ echo "*** skipping: since system Cython too old"
+ continue
+ fi
+ # For non native builds install everything, since Python is embedded
+ if [[ ! $APPLICATION_NAME =~ native ]]; then
+ if [[ $k == "otfmi" ]]; then
+ echo "INFO: install dill-0.3.4"
+ ${PYTHONBIN} -m pip install $SOURCE_DIR/dill-0.3.4/dill-0.3.4-py2.py3-none-any.whl --no-deps
+ if [ $? -ne 0 ]
+ then
+ echo "FATAL: could not install dikk-0.3.4"
+ exit 5
+ fi
+ elif [[ $k == "otpod" ]]; then
+ echo "INFO: install threadpoolctl-3.0.0"
+ ${PYTHONBIN} -m pip install $SOURCE_DIR/threadpoolctl-3.0.0/threadpoolctl-3.0.0-py3-none-any.whl --no-deps
+ if [ $? -ne 0 ]
+ then
+ echo "FATAL: could not install readpoolctl 3.0.0"
+ exit 6
+ fi
+ echo "INFO: install joblib-1.1.0"
+ ${PYTHONBIN} -m pip install $SOURCE_DIR/joblib-1.1.0/joblib-1.1.0-py2.py3-none-any.whl --no-deps
+ if [ $? -ne 0 ]
+ then
+ echo "FATAL: could not install joblib-1.1.0"
+ exit 6
+ fi
+ echo "INFO: install decorator-5.1.0"
+ ${PYTHONBIN} -m pip install $SOURCE_DIR/decorator-5.1.0/decorator-5.1.0-py3-none-any.whl --no-deps
+ if [ $? -ne 0 ]
+ then
+ echo "FATAL: could not install decorator-5.1.0"
+ exit 6
+ fi
+ echo "INFO: install scikit-learn-0.24.2"
+ ${PYTHONBIN} -m pip install $SOURCE_DIR/scikit-learn-0.24.2/scikit-learn-0.24.2.tar.gz --no-deps
+ if [ $? -ne 0 ]
+ then
+ echo "FATAL: could not install scikit-0.24.2"
+ exit 6
+ fi
+ fi
+ fi
+
+ cd $BUILD_DIR
+ mkdir ${BUILD_DIR}/$k
+ cd ${BUILD_DIR}/$k
+ cp -R $SOURCE_DIR/$k-${OTP[$k]}/* .
+ #
+ $PYTHONBIN setup.py build
+ if [ $? -ne 0 ]
+ then
+ echo "ERROR on ${PYTHONBIN} setup.py build"
+ exit 4
+ fi
+ #
+ $PYTHONBIN setup.py install --prefix=$PRODUCT_INSTALL
+ if [ $? -ne 0 ]
+ then
+ echo "ERROR on ${PYTHONBIN} setup.py install --prefix=$PRODUCT_INSTALL"
+ exit 5
+ fi
+ done
+fi
+
+echo
+echo "########## END"
--- /dev/null
+#!/bin/bash
+
+#!/bin/bash
+
+echo "##########################################################################"
+echo "statsmodels " $VERSION
+echo "##########################################################################"
+
+echo "*** build in SOURCE directory"
+
+
+cd $BUILD_DIR
+cp -R $SOURCE_DIR/* .
+
+if [[ $DIST_NAME == "CO" && $DIST_VERSION == "8" && $APPLICATION_NAME =~ native ]]; then
+ PRODUCT_LIB=lib64
+else
+ PRODUCT_LIB=lib
+fi
+mkdir -p $PRODUCT_INSTALL/${PRODUCT_LIB}/python${PYTHON_VERSION:0:3}/site-packages
+export PATH=$(pwd)/bin:$PATH
+export PYTHONPATH=$(pwd):$PYTHONPATH
+export PYTHONPATH=${PRODUCT_INSTALL}/${PRODUCT_LIB}/python${PYTHON_VERSION:0:3}/site-packages:$PYTHONPATH
+
+echo
+echo "*** build with $PYTHONBIN"
+###$PYTHONBIN setup.py clean
+$PYTHONBIN setup.py build
+if [ $? -ne 0 ]
+then
+ echo "ERROR on build"
+ exit 2
+fi
+
+echo
+echo "*** install with $PYTHONBIN"
+$PYTHONBIN setup.py install --prefix=$PRODUCT_INSTALL
+if [ $? -ne 0 ]
+then
+ echo "ERROR on install"
+ exit 3
+fi
+
+echo
+echo "########## END"
--- /dev/null
+#!/bin/bash
+
+#!/bin/bash
+
+echo "##########################################################################"
+echo "statsmodels " $VERSION
+echo "##########################################################################"
+
+echo "*** build in SOURCE directory"
+
+
+cd $BUILD_DIR
+cp -R $SOURCE_DIR/* .
+
+if [[ $DIST_NAME == "CO" && $DIST_VERSION == "8" && $APPLICATION_NAME =~ native ]]; then
+ PRODUCT_LIB=lib64
+else
+ PRODUCT_LIB=lib
+fi
+mkdir -p $PRODUCT_INSTALL/${PRODUCT_LIB}/python${PYTHON_VERSION:0:3}/site-packages
+export PATH=$(pwd)/bin:$PATH
+export PYTHONPATH=$(pwd):$PYTHONPATH
+export PYTHONPATH=${PRODUCT_INSTALL}/${PRODUCT_LIB}/python${PYTHON_VERSION:0:3}/site-packages:$PYTHONPATH
+
+echo
+echo "*** build with $PYTHONBIN"
+###$PYTHONBIN setup.py clean
+$PYTHONBIN setup.py build
+if [ $? -ne 0 ]
+then
+ echo "ERROR on build"
+ exit 2
+fi
+
+echo
+echo "*** install with $PYTHONBIN"
+$PYTHONBIN setup.py install --prefix=$PRODUCT_INSTALL
+if [ $? -ne 0 ]
+then
+ echo "ERROR on install"
+ exit 3
+fi
+
+echo
+echo "########## END"
def set_env(env, prereq_dir, version):
env.set('PYFMI_ROOT_DIR', prereq_dir)
-
+ pyver = 'python' + env.get('PYTHON_VERSION')
+ env.prepend('PYTHONPATH', os.path.join(prereq_dir, 'lib', pyver, 'site-packages'))
def set_nativ_env(env):
pass
def set_env(env, prereq_dir, version):
env.set('CMINPACK_ROOT_DIR', prereq_dir)
+ env.set('CMINPACK_DIR', os.path.join(prereq_dir,'share','cmake','Cminpack'))
env.prepend('PATH', os.path.join(prereq_dir,'bin'))
env.prepend('LD_LIBRARY_PATH',os.path.join(prereq_dir, 'lib'))
def set_nativ_env(env):
+ env.set('CMINPACK_ROOT_DIR', '/usr')
pass
def set_nativ_env(env):
env.set('LAPACKHOME', '/usr')
+ env.set('LAPACK_ROOT_DIR', '/')
def set_env(env, prereq_dir, version):
env.set('OPENTURNS_ROOT_DIR', prereq_dir)
+ env.set('OPENTURNS_VERSION',version)
env.prepend('PATH', os.path.join(prereq_dir,'bin'))
env.prepend('LD_LIBRARY_PATH',os.path.join(prereq_dir, 'lib'))
pyver = 'python' + env.get('PYTHON_VERSION')
env.prepend('PYTHONPATH', os.path.join(prereq_dir, 'lib', pyver, 'site-packages'))
-
def set_nativ_env(env):
pass
version_1_16 :
{
+ compil_script : "openturns-1.16" + $VARS.scriptExtension
patches : ['openturns-1.16.0001.patch','openturns-1.16.0002.patch']
}
{
patches : []
}
+
+version_1_17 :
+{
+ compil_script : "openturns-1.17" + $VARS.scriptExtension
+ patches : ['openturns-1.17.0001.patch']
+ depend : ['Python', 'lapack', 'hdf5', 'tbb', 'nlopt', 'libxml2', 'eigen', 'matplotlib', 'cminpack', 'FMILibrary', 'PyFMI']
+ opt_depend : ['pandas', 'statsmodels']
+}
+
+version_1_17_win :
+{
+ patches : []
+}
--- /dev/null
+diff -Naur openturns-1.17_ref/openturns-1.17/CMakeLists.txt openturns-1.17_new/openturns-1.17/CMakeLists.txt
+--- openturns-1.17_ref/openturns-1.17/CMakeLists.txt 2021-09-21 13:59:56.000000000 +0200
++++ openturns-1.17_new/openturns-1.17/CMakeLists.txt 2021-10-04 13:27:16.893096795 +0200
+@@ -133,6 +133,11 @@
+
+ set (CMAKE_CXX_STANDARD 11)
+
++SET(LAPACK_ROOT_DIR $ENV{LAPACK_ROOT_DIR})
++IF(LAPACK_ROOT_DIR)
++ LIST(APPEND CMAKE_PREFIX_PATH "${LAPACK_ROOT_DIR}")
++ENDIF(LAPACK_ROOT_DIR)
++
+ if (NOT DEFINED LAPACK_LIBRARIES)
+ find_package (LAPACK REQUIRED)
+ if (LAPACK_FOUND)
+@@ -140,6 +145,10 @@
+ endif ()
+ endif ()
+ list (APPEND OPENTURNS_PRIVATE_LIBRARIES ${LAPACK_LIBRARIES})
++IF (DEFINED CBLAS_LIBRARIES)
++ MESSAGE(STATUS "CBLAS_LIBRARIES is defined... adding to the list of libraries ${CBLAS_LIBRARIES}")
++ LIST (APPEND OPENTURNS_PRIVATE_LIBRARIES ${CBLAS_LIBRARIES})
++ENDIF()
+
+ if (USE_SPECTRA)
+ find_package (Spectra)
+@@ -164,7 +173,11 @@
+ endif ()
+
+ if (USE_TBB)
+- find_package (TBB)
++ SET(TBB_ROOT_DIR $ENV{TBB_ROOT_DIR})
++ if(TBB_ROOT_DIR)
++ LIST(APPEND CMAKE_PREFIX_PATH "${TBB_ROOT_DIR}")
++ endif(TBB_ROOT_DIR)
++ find_package (TBB)
+ endif ()
+ if (TBB_FOUND)
+ set (OPENTURNS_HAVE_TBB_TBB_H TRUE)
+@@ -207,6 +220,10 @@
+ endif ()
+
+ if (USE_LIBXML2)
++ SET(LIBXML2_ROOT_DIR $ENV{LIBXLM2_ROOT_DIR})
++ if(LIBXML2_ROOT_DIR)
++ LIST(APPEND CMAKE_PREFIX_PATH "${LIBXML2_ROOT_DIR}")
++ endif(LIBXML2_ROOT_DIR)
+ find_package (LibXml2)
+ endif ()
+ if (LIBXML2_FOUND)
+@@ -216,7 +233,19 @@
+ list (APPEND OPENTURNS_PRIVATE_LIBRARIES ${LIBXML2_LIBRARIES})
+ endif ()
+
++SET(MPI_ROOT_DIR $ENV{MPI_ROOT_DIR} CACHE PATH "Path to the MPI.")
++IF(MPI_ROOT_DIR)
++ LIST(APPEND CMAKE_PREFIX_PATH "${MPI_ROOT_DIR}")
++ find_package(MPI)
++ list (APPEND OPENTURNS_PRIVATE_INCLUDE_DIRS ${MPI_INCLUDE_DIRS})
++ list (APPEND OPENTURNS_PRIVATE_LIBRARIES ${MPI_LIBRARIES})
++ENDIF(MPI_ROOT_DIR)
++
+ if (USE_HDF5)
++ SET(HDF5_ROOT_DIR $ENV{HDF5_ROOT_DIR} CACHE PATH "Path to the HDF5.")
++ IF(HDF5_ROOT_DIR)
++ LIST(APPEND CMAKE_PREFIX_PATH "${HDF5_ROOT_DIR}")
++ ENDIF(HDF5_ROOT_DIR)
+ find_package(HDF5 COMPONENTS CXX)
+ endif ()
+ if (HDF5_FOUND)
+@@ -237,6 +266,10 @@
+ endif ()
+
+ if (USE_BOOST)
++ SET(BOOST_ROOT_DIR $ENV{BOOST_ROOT_DIR} CACHE PATH "Path to the BOOST.")
++ IF(BOOST_ROOT_DIR)
++ LIST(APPEND CMAKE_PREFIX_PATH "${BOOST_ROOT_DIR}")
++ ENDIF(BOOST_ROOT_DIR)
+ find_package (Boost 1.46)
+ if (Boost_FOUND)
+ if (CMAKE_VERSION VERSION_LESS 3.15)
+@@ -272,7 +305,11 @@
+ endif ()
+
+ if (USE_NLOPT)
+- find_package (NLopt CONFIG QUIET)
++ SET(NLOPT_ROOT_DIR $ENV{NLOPT_ROOT_DIR} CACHE PATH "Path to the NLOPT.")
++ IF(NLOPT_ROOT_DIR)
++ LIST(APPEND CMAKE_PREFIX_PATH "${NLOPT_ROOT_DIR}")
++ ENDIF(NLOPT_ROOT_DIR)
++ find_package (NLopt)
+ if (NLopt_FOUND)
+ message(STATUS "Found NLopt: ${NLopt_DIR}")
+ else ()
+@@ -336,22 +373,22 @@
+ endif ()
+
+ if (USE_CMINPACK)
+- find_package (CMinpack CONFIG QUIET)
+- if (CMinpack_FOUND)
+- if (TARGET cminpack::cminpack)
+- message (STATUS "Found CMinpack: ${CMinpack_DIR}")
+- set (CMINPACK_LIBRARIES cminpack::cminpack)
+- endif ()
+- else ()
+- # fallback to our macro if CMinpackConfig is not provided
+- find_package (CMinpack)
+- set (CMinpack_FOUND ${CMINPACK_FOUND})
+- endif ()
+- if (CMinpack_FOUND)
+- set (OPENTURNS_HAVE_CMINPACK TRUE)
+- list (APPEND OPENTURNS_PRIVATE_INCLUDE_DIRS ${CMINPACK_INCLUDE_DIRS})
+- list (APPEND OPENTURNS_PRIVATE_LIBRARIES ${CMINPACK_LIBRARIES})
+- endif ()
++ SET(CMINPACK_ROOT_DIR $ENV{CMINPACK_ROOT_DIR} CACHE PATH "Path to the CMINPACK.")
++ IF(CMINPACK_ROOT_DIR)
++ LIST(APPEND CMAKE_PREFIX_PATH "${CMINPACK_ROOT_DIR}")
++ ENDIF(CMINPACK_ROOT_DIR)
++ find_package (CMinpack)
++ set (CMinpack_FOUND ${CMINPACK_FOUND})
++endif ()
++if (CMinpack_FOUND)
++ MESSAGE(STATUS "Found CMkinpack ...")
++ MESSAGE(STATUS " CMINPACK_LIBRARIES is set to: ${CMINPACK_LIBRARIES}")
++ set (OPENTURNS_HAVE_CMINPACK TRUE)
++ list (APPEND OPENTURNS_PRIVATE_INCLUDE_DIRS ${CMINPACK_INCLUDE_DIRS})
++ list (APPEND OPENTURNS_PRIVATE_LIBRARIES ${CMINPACK_LIBRARIES})
++else()
++ MESSAGE(STATUS "Could not find MinPack dependency")
++ set (OPENTURNS_HAVE_CMINPACK FALSE)
+ endif ()
+
+ if (USE_BONMIN)
+diff -Naur openturns-1.17_ref/openturns-1.17/cmake/FindCMinpack.cmake openturns-1.17_new/openturns-1.17/cmake/FindCMinpack.cmake
+--- openturns-1.17_ref/openturns-1.17/cmake/FindCMinpack.cmake 2021-09-21 13:28:10.246960802 +0200
++++ openturns-1.17_new/openturns-1.17/cmake/FindCMinpack.cmake 2021-09-21 13:27:42.519698634 +0200
+@@ -22,14 +22,19 @@
+ # (To distributed this file outside of CMake, substitute the full
+ # License text for the above reference.)
+
++SET(CMINPACK_ROOT_DIR $ENV{CMINPACK_ROOT_DIR})
++if(CMINPACK_ROOT_DIR)
++ LIST(APPEND CMAKE_PREFIX_PATH "${CMINPACK_ROOT_DIR}")
++endif(CMINPACK_ROOT_DIR)
+ find_path (CMINPACK_INCLUDE_DIR cminpack.h
+ PATH_SUFFIXES cminpack cminpack-1
+ )
+
+ find_library (CMINPACK_LIBRARY
+ NAMES cminpack cminpack_s
++ HINTS ${CMINPACK_ROOT_DIR}/include
++ DOC "CMINPACK include directory"
+ )
+-
+ set (CMINPACK_LIBRARIES ${CMINPACK_LIBRARY})
+ set (CMINPACK_INCLUDE_DIRS ${CMINPACK_INCLUDE_DIR})
+
+diff -Naur openturns-1.17_ref/openturns-1.17/cmake/FindNLopt.cmake openturns-1.17_new/openturns-1.17/cmake/FindNLopt.cmake
+--- openturns-1.17_ref/openturns-1.17/cmake/FindNLopt.cmake 2021-09-21 13:28:10.247960811 +0200
++++ openturns-1.17_new/openturns-1.17/cmake/FindNLopt.cmake 2021-09-21 13:27:42.520698643 +0200
+@@ -11,8 +11,19 @@
+ # NLOPT_ROOT_DIR - root dir (ex. /usr/local)
+
+ # set NLOPT_INCLUDE_DIR
++SET(NLOPT_ROOT_DIR $ENV{NLOPT_ROOT_DIR})
++
++IF(NLOPT_ROOT_DIR)
++ LIST(APPEND CMAKE_PREFIX_PATH "${NLOPT_ROOT_DIR}")
++ LIST(APPEND CMAKE_PREFIX_PATH "${NLOPT_ROOT_DIR}/include")
++ LIST(APPEND CMAKE_PREFIX_PATH "${NLOPT_ROOT_DIR}/lib")
++ELSE(NLOPT_ROOT_DIR)
++ MESSAGE(FATAL_ERROR "PLEASE SET ENVIRONMENT VARIABLE NLOPT_ROOT_DIR")
++ENDIF(NLOPT_ROOT_DIR)
++
+ find_path (NLOPT_INCLUDE_DIR
+ NAMES nlopt.hpp
++ HINTS ${NLOPT_ROOT_DIR}/include
+ DOC
+ "Nlopt include directory"
+ )
+@@ -22,7 +33,8 @@
+
+ # set NLOPT_LIBRARY
+ find_library (NLOPT_LIBRARY
+- NAMES nlopt_cxx nlopt
++ NAMES nlopt
++ HINTS ${NLOPT_ROOT_DIR}/lib
+ DOC
+ "Nlopt library location"
+ )
+diff -Naur openturns-1.17_ref/openturns-1.17/cmake/FindTBB.cmake openturns-1.17_new/openturns-1.17/cmake/FindTBB.cmake
+--- openturns-1.17_ref/openturns-1.17/cmake/FindTBB.cmake 2021-09-21 13:28:10.242960764 +0200
++++ openturns-1.17_new/openturns-1.17/cmake/FindTBB.cmake 2021-09-21 13:27:42.514698586 +0200
+@@ -27,6 +27,11 @@
+ # (To distributed this file outside of CMake, substitute the full
+ # License text for the above reference.)
+
++SET(TBB_ROOT_DIR $ENV{TBB_ROOT_DIR})
++IF(TBB_ROOT_DIR)
++ LIST(APPEND CMAKE_PREFIX_PATH "${TBB_ROOT_DIR}")
++ENDIF(TBB_ROOT_DIR)
++
+ find_path (TBB_INCLUDE_DIR NAMES tbb/tbb.h DOC "TBB include directory")
+
+ set (TBB_INCLUDE_DIRS ${TBB_INCLUDE_DIR})
+diff -Naur openturns-1.17_ref/openturns-1.17/lib/src/CMakeLists.txt openturns-1.17_new/openturns-1.17/lib/src/CMakeLists.txt
+--- openturns-1.17_ref/openturns-1.17/lib/src/CMakeLists.txt 2021-09-21 13:27:57.412839452 +0200
++++ openturns-1.17_new/openturns-1.17/lib/src/CMakeLists.txt 2021-09-21 13:27:14.134430243 +0200
+@@ -124,5 +124,5 @@
+ if (UNIX AND BUILD_SHARED_LIBS)
+ set (OT_GDB_PY ${CMAKE_SHARED_LIBRARY_PREFIX}OT${CMAKE_SHARED_LIBRARY_SUFFIX}.${LIB_VERSION}-gdb.py)
+ execute_process (COMMAND ${CMAKE_COMMAND} -E create_symlink ${CMAKE_CURRENT_SOURCE_DIR}/libOT-gdb.py ${CMAKE_CURRENT_BINARY_DIR}/${OT_GDB_PY})
+- install (FILES libOT-gdb.py DESTINATION ${OPENTURNS_DATA_PATH}/gdb/auto-load/${LIBRARY_PATH} RENAME ${OT_GDB_PY})
++ install (FILES libOT-gdb.py DESTINATION ${OPENTURNS_DATA_PATH}/gdb/auto-load RENAME ${OT_GDB_PY})
+ endif ()
+diff -Naur openturns-1.17_ref/openturns-1.17/lib/src/Base/Common/openturns/TBB.hxx openturns-1.17_new/openturns-1.17/lib/src/Base/Common/openturns/TBB.hxx
+--- openturns-1.17_ref/openturns-1.17/lib/src/Base/Common/openturns/TBB.hxx 2021-09-21 13:27:54.484811767 +0200
++++ openturns-1.17_new/openturns-1.17/lib/src/Base/Common/openturns/TBB.hxx 2021-09-21 13:27:12.704416722 +0200
+@@ -35,6 +35,7 @@
+ # define __TBBMALLOC_NO_IMPLICIT_LINKAGE 1
+ # endif
+ #endif
++#define TBB_PREVIEW_TASK_ARENA 1
+ #include <tbb/task_arena.h>
+ #include <tbb/parallel_sort.h>
+ #include <tbb/parallel_reduce.h>
+diff -Naur openturns-1.17_ref/openturns-1.17/lib/src/Base/Algo/openturns/KarhunenLoeveAlgorithmImplementation.hxx openturns-1.17_new/openturns-1.17/lib/src/Base/Algo/openturns/KarhunenLoeveAlgorithmImplementation.hxx
+--- openturns-1.17_ref/openturns-1.17/lib/src/Base/Algo/openturns/KarhunenLoeveAlgorithmImplementation.hxx 2021-09-21 13:27:55.324819709 +0200
++++ openturns-1.17_new/openturns-1.17/lib/src/Base/Algo/openturns/KarhunenLoeveAlgorithmImplementation.hxx 2021-09-21 13:27:13.048419975 +0200
+@@ -24,6 +24,13 @@
+ #include "openturns/PersistentObject.hxx"
+ #include "openturns/CovarianceModel.hxx"
+ #include "openturns/KarhunenLoeveResult.hxx"
++#ifdef __GNUC__
++# include <features.h>
++# if __GNUC_PREREQ(11,0)
++# include <limits>
++# endif
++#endif // __GNUC__
++
+
+ BEGIN_NAMESPACE_OPENTURNS
+
--- /dev/null
+default :
+{
+ name : "patsy"
+ build_source : "script"
+ compil_script : "pip_install" + $VARS.scriptExtension
+ get_source : "archive"
+ system_info :
+ {
+ rpm : []
+ rpm_dev : []
+ apt : []
+ apt_dev : []
+ }
+ environ :
+ {
+
+ }
+ depend : ["Python", "setuptools"]
+ opt_depend : ['pandas']
+ source_dir : $APPLICATION.workdir + $VARS.sep + 'SOURCES' + $VARS.sep + $name
+ build_dir : $APPLICATION.workdir + $VARS.sep + 'BUILD' + $VARS.sep + $name
+ install_dir : 'base'
+ properties:
+ {
+ incremental : "yes"
+ pip : "yes"
+ }
+}
--- /dev/null
+default :
+{
+ name : "statsmodels"
+ build_source : "script"
+ compil_script : "pip_install" + $VARS.scriptExtension
+ get_source : "archive"
+ system_info :
+ {
+ rpm : ['python3-statsmodels']
+ rpm_dev : ['python3-statsmodels']
+ apt : ['python3-statsmodels']
+ apt_dev : ['python3-statsmodels']
+ }
+ environ :
+ {
+
+ }
+ depend : ["Python", "setuptools","PyFMI"]
+ opt_depend : ['pandas', 'patsy']
+ source_dir : $APPLICATION.workdir + $VARS.sep + 'SOURCES' + $VARS.sep + $name
+ build_dir : $APPLICATION.workdir + $VARS.sep + 'BUILD' + $VARS.sep + $name
+ install_dir : 'base'
+ properties:
+ {
+ incremental : "yes"
+ pip : "yes"
+ }
+}
+
+version_0_8_0:
+{
+ properties:
+ {
+ incremental : "yes"
+ pip : "yes"
+ }
+}
+
+version_0_6_1:
+{
+ properties:
+ {
+ incremental : "yes"
+ pip : "yes"
+ }
+}
