set(ADAO_RES_SALOME "share/salome/resources/adao")
set(ADAO_BIN "bin")
set(ADAO_BIN_TEST "bin/salome/test")
+set(ADAO_TEST "share/test/adao")
set(CONFIGURATION_ROOT_DIR $ENV{CONFIGURATION_ROOT_DIR} CACHE PATH "Path to the Salome CMake configuration files")
if(EXISTS ${CONFIGURATION_ROOT_DIR})
if(ADAO_PYTHON_MODULE)
+ install(FILES COPYING.txt README.txt DESTINATION $ENV{CURRENT_SOFTWARE_INSTALL_DIR})
+
if(ADAO_BUILD_DOC)
find_package(SalomeSphinx)
if(NOT SPHINX_FOUND)
message(FATAL_ERROR "Sphinx has not been found !")
endif(NOT SPHINX_FOUND)
endif(ADAO_BUILD_DOC)
-
+
add_subdirectory(src)
add_subdirectory(resources)
add_subdirectory(bin)
add_subdirectory(i18n)
add_subdirectory(doc)
-
+ add_subdirectory(test)
+
else(ADAO_PYTHON_MODULE)
# ADAO_SALOME_MODULE
+ install(FILES COPYING.txt README.txt DESTINATION $ENV{CURRENT_SOFTWARE_INSTALL_DIR})
find_package(SalomeOmniORB REQUIRED)
find_package(SalomeOmniORBPy REQUIRED)
find_package(SalomeKERNEL REQUIRED)
KERNEL_WITH_CORBA()
-
+
if(NOT ADAO_PYTHON_ROOT_DIR)
message(FATAL_ERROR "ADAO_PYTHON_ROOT_DIR cmake variable has to be set if ADAO_SALOME_MODULE option is ON.")
endif(NOT ADAO_PYTHON_ROOT_DIR)
+
find_file(FILE_OF_ADAO_PYTHON_MODULE "daCore/__init__.py" PATHS "${ADAO_PYTHON_ROOT_DIR}/${ADAO_SCRIPT_PYTHON}/adao")
if(NOT FILE_OF_ADAO_PYTHON_MODULE)
message(FATAL_ERROR "Could not locate daCore/__init__.py into specified ADAO_PYTHON_ROOT_DIR directory ! Sounds bad !")
if(NOT EFICAS_ROOT_DIR)
message(FATAL_ERROR "EFICAS_ROOT_DIR is absolutely needed !")
endif(NOT EFICAS_ROOT_DIR)
-
- find_file(FILE_OF_EFICAS "generator/__init__.py" PATHS ${EFICAS_ROOT_DIR})
+ find_file(FILE_OF_EFICAS "generator/__init__.py" PATHS ${EFICAS_ROOT_DIR})
if(NOT FILE_OF_EFICAS)
message(FATAL_ERROR "Could not locate generator/__init__.py into EFICAS_ROOT_DIR")
endif(NOT FILE_OF_EFICAS)
-
+
add_subdirectory(src)
add_subdirectory(idl)
add_subdirectory(resources)
add_subdirectory(test)
-
+
endif(ADAO_PYTHON_MODULE)
+++ /dev/null
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--- /dev/null
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+++ /dev/null
-=====================================================
-ADAO: A module for Data Assimilation and Optimization
-=====================================================
-
-About
------
-
-**The ADAO module provides data assimilation and optimization**
-features in Python or SALOME context (see
-http://www.salome-platform.org/). Briefly stated, Data Assimilation is
-a methodological framework to compute the optimal estimate of the
-inaccessible true value of a system state, eventually over time. It
-uses information coming from experimental measurements or observations,
-and from numerical *a priori* models, including information about their
-errors. Parts of the framework are also known under the names of
-*parameter estimation*, *inverse problems*, *Bayesian estimation*,
-*optimal interpolation*, etc. More details can be found in the full
-ADAO documentation (see http://www.salome-platform.org/).
-
-Only the use of ADAO text programming interface (API/TUI) is introduced
-here. This interface gives ability to create a calculation object in a
-similar way than the case building obtained through the graphical
-interface (GUI). When one wants to elaborate "by hand" the TUI
-calculation case, it is recommended to extensively use all the ADAO
-module documentation, and to go back if necessary to the graphical
-interface (GUI), to get all the elements allowing to correctly set the
-commands.
-
-A simple setup example of an ADAO TUI calculation case
-------------------------------------------------------
-
-To introduce the TUI interface, lets begin by a simple but complete
-example of ADAO calculation case. All the data are explicitly defined
-inside the script in order to make the reading easier. The whole set of
-commands is the following one::
-
- from numpy import array, matrix
- from adao import adaoBuilder
- case = adaoBuilder.New()
- case.set( 'AlgorithmParameters', Algorithm='3DVAR' )
- case.set( 'Background', Vector=[0, 1, 2] )
- case.set( 'BackgroundError', ScalarSparseMatrix=1.0 )
- case.set( 'Observation', Vector=array([0.5, 1.5, 2.5]) )
- case.set( 'ObservationError', DiagonalSparseMatrix='1 1 1' )
- case.set( 'ObservationOperator', Matrix='1 0 0;0 2 0;0 0 3' )
- case.set( 'Observer', Variable="Analysis", Template="ValuePrinter" )
- case.execute()
-
-The result of running these commands in SALOME (either as a SALOME
-"*shell*" command, in the Python command window of the interface, or by
-the script execution entry of the menu) is the following::
-
- Analysis [ 0.25000264 0.79999797 0.94999939]
-
-More advanced examples of ADAO TUI calculation case
----------------------------------------------------
-
-Real cases involves observations loaded from files, operators
-explicitly defined as generic functions including physical simulators,
-time dependant information in order to deal with forecast analysis in
-addition to calibration or re-analysis. More details can be found in
-the full ADAO documentation (see http://www.salome-platform.org/).
-
-License and requirements
-------------------------
-
-The license for this module is the GNU Lesser General Public License
-(Lesser GPL), as stated here and in the source files::
-
- <ADAO, a module for Data Assimilation and Optimization>
-
- Copyright (C) 2008-2019 EDF R&D
-
- This library is free software; you can redistribute it and/or
- modify it under the terms of the GNU Lesser General Public
- License as published by the Free Software Foundation; either
- version 2.1 of the License, or (at your option) any later version.
-
- This library is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
- Lesser General Public License for more details.
-
- You should have received a copy of the GNU Lesser General Public
- License along with this library; if not, write to the Free Software
- Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
-
- See http://www.salome-platform.org/
-
-In addition, we require that all publication or presentation describing
-work using this software, or all commercial or not products using it,
-quote at least one of the references given below:
-
- * *ADAO, a module for Data Assimilation and Optimization*,
- http://www.salome-platform.org/
-
- * *ADAO, un module pour l'Assimilation de Données et l'Aide à
- l'Optimisation*, http://www.salome-platform.org/
-
- * *SALOME The Open Source Integration Platform for Numerical Simulation*,
- http://www.salome-platform.org/
-
-The documentation of the module is also covered by the license and the
-requirement of quoting.
--- /dev/null
+=====================================================
+ADAO: A module for Data Assimilation and Optimization
+=====================================================
+
+About
+-----
+
+**The ADAO module provides data assimilation and optimization**
+features in Python or SALOME context (see
+http://www.salome-platform.org/). Briefly stated, Data Assimilation is
+a methodological framework to compute the optimal estimate of the
+inaccessible true value of a system state, eventually over time. It
+uses information coming from experimental measurements or observations,
+and from numerical *a priori* models, including information about their
+errors. Parts of the framework are also known under the names of
+*parameter estimation*, *inverse problems*, *Bayesian estimation*,
+*optimal interpolation*, etc. More details can be found in the full
+ADAO documentation (see http://www.salome-platform.org/).
+
+Only the use of ADAO text programming interface (API/TUI) is introduced
+here. This interface gives ability to create a calculation object in a
+similar way than the case building obtained through the graphical
+interface (GUI). When one wants to elaborate "by hand" the TUI
+calculation case, it is recommended to extensively use all the ADAO
+module documentation, and to go back if necessary to the graphical
+interface (GUI), to get all the elements allowing to correctly set the
+commands.
+
+A simple setup example of an ADAO TUI calculation case
+------------------------------------------------------
+
+To introduce the TUI interface, lets begin by a simple but complete
+example of ADAO calculation case. All the data are explicitly defined
+inside the script in order to make the reading easier. The whole set of
+commands is the following one::
+
+ from numpy import array, matrix
+ from adao import adaoBuilder
+ case = adaoBuilder.New()
+ case.set( 'AlgorithmParameters', Algorithm='3DVAR' )
+ case.set( 'Background', Vector=[0, 1, 2] )
+ case.set( 'BackgroundError', ScalarSparseMatrix=1.0 )
+ case.set( 'Observation', Vector=array([0.5, 1.5, 2.5]) )
+ case.set( 'ObservationError', DiagonalSparseMatrix='1 1 1' )
+ case.set( 'ObservationOperator', Matrix='1 0 0;0 2 0;0 0 3' )
+ case.set( 'Observer', Variable="Analysis", Template="ValuePrinter" )
+ case.execute()
+
+The result of running these commands in SALOME (either as a SALOME
+"*shell*" command, in the Python command window of the interface, or by
+the script execution entry of the menu) is the following::
+
+ Analysis [ 0.25000264 0.79999797 0.94999939]
+
+More advanced examples of ADAO TUI calculation case
+---------------------------------------------------
+
+Real cases involves observations loaded from files, operators
+explicitly defined as generic functions including physical simulators,
+time dependant information in order to deal with forecast analysis in
+addition to calibration or re-analysis. More details can be found in
+the full ADAO documentation (see http://www.salome-platform.org/).
+
+License and requirements
+------------------------
+
+The license for this module is the GNU Lesser General Public License
+(Lesser GPL), as stated here and in the source files::
+
+ <ADAO, a module for Data Assimilation and Optimization>
+
+ Copyright (C) 2008-2019 EDF R&D
+
+ This library is free software; you can redistribute it and/or
+ modify it under the terms of the GNU Lesser General Public
+ License as published by the Free Software Foundation; either
+ version 2.1 of the License, or (at your option) any later version.
+
+ This library is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ Lesser General Public License for more details.
+
+ You should have received a copy of the GNU Lesser General Public
+ License along with this library; if not, write to the Free Software
+ Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+
+ See http://www.salome-platform.org/
+
+In addition, we require that all publication or presentation describing
+work using this software, or all commercial or not products using it,
+quote at least one of the references given below:
+
+ * *ADAO, a module for Data Assimilation and Optimization*,
+ http://www.salome-platform.org/
+
+ * *ADAO, un module pour l'Assimilation de Données et l'Aide à
+ l'Optimisation*, http://www.salome-platform.org/
+
+ * *SALOME The Open Source Integration Platform for Numerical Simulation*,
+ http://www.salome-platform.org/
+
+The documentation of the module is also covered by the license and the
+requirement of quoting.
# Author: Anthony Geay, anthony.geay@edf.fr, EDF R&D
if(ADAO_SALOME_MODULE)
-
- #install(FILES daSalome/adaoBuilder.py daSalome/__init__.py DESTINATION "${ADAO_SCRIPT_PYTHON_SALOME}/adao")
+
add_subdirectory(daSalome)
-
+
else(ADAO_SALOME_MODULE)
-
- #install(FILES daSalome/adaoBuilder.py daSalome/__init__.py DESTINATION "${ADAO_SCRIPT_PYTHON_SALOME}/adao")
+
add_subdirectory(daSalome)
add_subdirectory(daComposant)
add_subdirectory(daEficas)
--- /dev/null
+# Copyright (C) 2008-2019 EDF R&D
+#
+# This file is part of SALOME ADAO module
+#
+# This library is free software; you can redistribute it and/or
+# modify it under the terms of the GNU Lesser General Public
+# License as published by the Free Software Foundation; either
+# version 2.1 of the License, or (at your option) any later version.
+#
+# This library is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+# Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this library; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+#
+# See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
+#
+# Author: Jean-Philippe Argaud, jean-philippe.argaud@edf.fr, EDF R&D
+
+SET(ADAO_ENGINE_ROOT_DIR $ENV{ADAO_ENGINE_ROOT_DIR})
+
+if(NOT ADAO_ENGINE_ROOT_DIR)
+ message(FATAL_ERROR "ADAO_ENGINE_ROOT_DIR environment variable has to be set before launching the tests.")
+endif(NOT ADAO_ENGINE_ROOT_DIR)
+
+SET(COMPONENT_NAME ADAO)
+SET(TIMEOUT 500)
+
+# Add all test subdirs
+SUBDIRS(
+ ${ADAO_ENGINE_ROOT_DIR}/share/test/adao/test1001
+ ${ADAO_ENGINE_ROOT_DIR}/share/test/adao/test1002
+ ${ADAO_ENGINE_ROOT_DIR}/share/test/adao/test6701
+ ${ADAO_ENGINE_ROOT_DIR}/share/test/adao/test6702
+ ${ADAO_ENGINE_ROOT_DIR}/share/test/adao/test6703
+ ${ADAO_ENGINE_ROOT_DIR}/share/test/adao/test6704
+ ${ADAO_ENGINE_ROOT_DIR}/share/test/adao/test6711
+ ${ADAO_ENGINE_ROOT_DIR}/share/test/adao/test6901
+ ${ADAO_ENGINE_ROOT_DIR}/share/test/adao/test6902
+ ${ADAO_ENGINE_ROOT_DIR}/share/test/adao/test6903
+ ${ADAO_ENGINE_ROOT_DIR}/share/test/adao/test6904
+ )
+++ /dev/null
-# Copyright (C) 2008-2019 EDF R&D
-#
-# This file is part of SALOME ADAO module
-#
-# This library is free software; you can redistribute it and/or
-# modify it under the terms of the GNU Lesser General Public
-# License as published by the Free Software Foundation; either
-# version 2.1 of the License, or (at your option) any later version.
-#
-# This library is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
-# Lesser General Public License for more details.
-#
-# You should have received a copy of the GNU Lesser General Public
-# License along with this library; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
-#
-# See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
-#
-
-SET(SALOME_TEST_DRIVER "@CMAKE_INSTALL_PREFIX@/bin/salome/appliskel/salome_test_driver.py")
-
-SET(COMPONENT_NAME ADAO)
-SET(TIMEOUT 500)
-
-# Add all test subdirs
-SUBDIRS(
- test1001
- test1002
- test6701
- test6702
- test6703
- test6704
- test6711
- test6901
- test6902
- test6903
- test6904
- )
