set (SOLVERLAB_VERSION_SUBMINOR alpha)
option (SOLVERLAB_WITH_DOCUMENTATION "Generate SOLVERLAB documentation" ON)
-option (SOLVERLAB_WITH_PYTHON "Compile Python interface of SOLVERLAB" ON)
+option (SOLVERLAB_WITH_PYTHON "Generate Python interface of SOLVERLAB using SWIG" ON)
option (SOLVERLAB_WITH_GUI "Compile a Graphic user Interface for SOLVERLAB" OFF)
option (SOLVERLAB_WITH_PACKAGE "Generate RPM, Debian and tarball packages" OFF)
option (SOLVERLAB_WITH_COREFLOWS "Generate COREFLOWS module" ON)
set(PETSC_INCLUDES /usr/include/petsc /usr/include/petsc/petsc/mpiuni)
set(PETSC_LIBRARIES /usr/lib64/libpetsc.so)
- set(PETSC_VERSION "3.8") #3.8 for fedora 26 , 3.9 for fedora 29 , 3.10 for fedora 30, , 3.12 for fedora 32
+ file(STRINGS /usr/include/petsc/petscversion.h petscversion_file)
+ FOREACH(line ${petscversion_file})
+ string(FIND "${line}" "#define PETSC_VERSION_MAJOR " pos)
+ IF(NOT ${pos} EQUAL -1)
+ string(LENGTH ${line} line_length_major)#length of the line
+ MATH(EXPR petsc_version_major "${line_length_major}-1")#line ends with "x", that counts for 1 character
+ string(SUBSTRING ${line} ${petsc_version_major} 1 PETSC_VERSION_MAJOR)
+ break()
+ ENDIF(NOT ${pos} EQUAL -1)
+ ENDFOREACH(line ${petscversion_file})
+ FOREACH(line ${petscversion_file})
+ string(FIND "${line}" "#define PETSC_VERSION_MINOR " pos)
+ IF(NOT ${pos} EQUAL -1)
+ string(LENGTH ${line} line_length_minor)#length of the line
+ if(${line_length_minor} EQUAL ${line_length_major})
+ MATH(EXPR petsc_version_minor "${line_length_minor}-1")#line ends with "y", that counts for 1 character
+ string(SUBSTRING ${line} ${petsc_version_minor} 1 PETSC_VERSION_MINOR)
+ break()
+ else(${line_length_minor} EQUAL ${line_length_major})
+ MATH(EXPR petsc_version_minor "${line_length_minor}-2")#line ends with "yy", that counts for two characters
+ string(SUBSTRING ${line} ${petsc_version_minor} 2 PETSC_VERSION_MINOR)
+ endif(${line_length_minor} EQUAL ${line_length_major})
+ ENDIF(NOT ${pos} EQUAL -1)
+ ENDFOREACH(line ${petscversion_file})
+ set(PETSC_VERSION ${PETSC_VERSION_MAJOR}.${PETSC_VERSION_MINOR}) #3.8 for fedora 26 , 3.9 for fedora 29 , 3.10 for fedora 30 , 3.12 for fedora 32 , 3.14 for fedora 34 , 3.15 for fedora 35
+ message(STATUS "PETSc detected, version is ${PETSC_VERSION_MAJOR}.${PETSC_VERSION_MINOR}" )
set(CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, petsc-devel (>= 3.4)") # This is not fully working yet.
set(PETSC_INSTALL ${PETSC_DIR})
set(SLEPC_DIR /usr/)
set(SLEPC_INCLUDES ${SLEPC_DIR}/include)
set(SLEPC_LIBRARIES ${SLEPC_DIR}/lib/libslepc.so)
+ file(STRINGS /usr/include/slepc/slepcversion.h slepcversion_file)
+ FOREACH(line ${slepcversion_file})
+ string(FIND "${line}" "#define SLEPC_VERSION_MAJOR " pos)
+ IF(NOT ${pos} EQUAL -1)
+ string(LENGTH ${line} line_length_major)#length of the line
+ MATH(EXPR slepc_version_major "${line_length_major}-1")#line ends with "x", that counts for 1 character
+ string(SUBSTRING ${line} ${slepc_version_major} 1 SLEPC_VERSION_MAJOR)
+ break()
+ ENDIF(NOT ${pos} EQUAL -1)
+ ENDFOREACH(line ${slepcversion_file})
+ FOREACH(line ${slepcversion_file})
+ string(FIND "${line}" "#define SLEPC_VERSION_MINOR " pos)
+ IF(NOT ${pos} EQUAL -1)
+ string(LENGTH ${line} line_length_minor)#length of the line
+ if(${line_length_minor} EQUAL ${line_length_major})
+ MATH(EXPR slepc_version_minor "${line_length_minor}-1")#line ends with "y", that counts for 1 character
+ string(SUBSTRING ${line} ${slepc_version_minor} 1 SLEPC_VERSION_MINOR)
+ break()
+ else(${line_length_minor} EQUAL ${line_length_major})
+ MATH(EXPR slepc_version_minor "${line_length_minor}-2")#line ends with "yy", that counts for two characters
+ string(SUBSTRING ${line} ${slepc_version_minor} 2 SLEPC_VERSION_MINOR)
+ endif(${line_length_minor} EQUAL ${line_length_major})
+ ENDIF(NOT ${pos} EQUAL -1)
+ ENDFOREACH(line ${slepcversion_file})
+ set(SLEPC_VERSION ${SLEPC_VERSION_MAJOR}.${SLEPC_VERSION_MINOR}) #3.8 for fedora 26 , 3.9 for fedora 29 , 3.10 for fedora 30 , 3.12 for fedora 32 , 3.14 for fedora 34 , 3.15 for fedora 35
+ message(STATUS "SLEPc detected, version is ${SLEPC_VERSION_MAJOR}.${SLEPC_VERSION_MINOR}" )
set (CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, slepc-devel (>= 3.4)") # This is not fully working yet.
else ( IS_DIRECTORY "/usr/include/slepc/" AND EXISTS "/usr/lib64/libslepc.so" )
message( FATAL_ERROR "SLEPc not found in the system" )
set( PARAVIEW_LIBRARIES_DIR $ENV{PARAVIEW_ROOT_DIR}/lib)
endif( PARAVIEW_ROOT_DIR )
else( PARAVIEW_ROOT_DIR OR DEFINED ENV{PARAVIEW_ROOT_DIR})
- message(STATUS "PARAVIEW_ROOT_DIR not set. Trying to detect paraview.")
+ message(STATUS "PARAVIEW_ROOT_DIR not set. Trying to detect paraview in the system.")
set( PARAVIEW_INCLUDE_DIR /usr/include/paraview/)
- set( PARAVIEW_LIBRARIES_DIR /usr/lib/paraview/:/usr/lib64/paraview/:/usr/lib64/vtk/:/usr/lib/vtk/)
+ set( PARAVIEW_LIBRARIES_DIR /usr/lib/paraview/:/usr/lib64/paraview/:/usr/lib64/vtk/:/usr/lib/vtk/:/usr/lib/x86_64-linux-gnu)
endif( PARAVIEW_ROOT_DIR OR DEFINED ENV{PARAVIEW_ROOT_DIR})
if ( DEFINED PARAVIEW_VERSION OR DEFINED ENV{PARAVIEW_VERSION} )
set(Python_VERSION_MINOR ${PYTHON_VERSION_MINOR})
ENDIF(${CMAKE_VERSION} VERSION_GREATER "3.12.0")
+message(STATUS "Python version found is ${Python_VERSION}")
+
+#Paraview library paths
+set (PV_LIB_DIR /usr/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/dist-packages/paraview/:/usr/lib64/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtk/:${MATPLOTLIB_ROOT_DIR}/lib/:${PARAVIEW_LIBRARIES_DIR})
+set (PV_PYTHON_DIR /usr/lib/python${Python_VERSION_MAJOR}/dist-packages/:/usr/lib/python${Python_VERSION_MAJOR}/dist-packages/paraview/:/usr/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/dist-packages/paraview/:/usr/lib64/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtk/:/usr/lib64/paraview/site-packages/:/usr/lib64/paraview/site-packages/paraview/:/usr/lib64/paraview/site-packages/vtk/:/usr/lib64/paraview/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/:/usr/lib64/paraview/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/paraview/:/usr/lib64/paraview/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtkmodules:/usr/lib/paraview/site-packages/paraview:/usr/lib/paraview/site-packages/paraview/vtk:${PARAVIEW_ROOT_DIR}/lib/:${PARAVIEW_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/:${PARAVIEW_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtkmodules/:${MATPLOTLIB_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages:${PYQT5_ROOT_DIR}:${PYQT5_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages)
+
+# Detection of python-paraview
+string(REPLACE ":" ";" PV_PYTHON_DIR_PATHS "${PV_PYTHON_DIR}")# use semicolon instead of colon in PATH search
+find_file(python-paraview simple.py PATHS ${PV_PYTHON_DIR_PATHS})
+if( ${python-paraview} STREQUAL "python-paraview-NOTFOUND" )
+ message(WARNING "Python Paraview library not found. Post processing will fail in SOLVERLAB scripts.")
+ set(PRELOAD_NETCDF_ON_UBUNTU20 OFF)
+else( ${python-paraview} STREQUAL "python-paraview-NOTFOUND" )
+ if( ${python-paraview} STREQUAL "/usr/lib/python3/dist-packages/paraview/simple.py" )
+ message ( STATUS "Using system Paraview python libraries on Ubuntu 20.04 requires the presence and preload of library netcdf (bug in linkage)." )
+ if( EXISTS "/usr/lib/x86_64-linux-gnu/libnetcdf.so" )
+ message ( STATUS "Library netcdf found in the system. Paraview python libraries should be functional." )
+ set(PRELOAD_NETCDF_ON_UBUNTU20 ON)
+ else( EXISTS "/usr/lib/x86_64-linux-gnu/libnetcdf.so" )
+ message ( WARNING "Library netcdf not found in system. Paraview python libraries may not be functional (bug in linkage)." )
+ set(PRELOAD_NETCDF_ON_UBUNTU20 OFF)
+ endif( EXISTS "/usr/lib/x86_64-linux-gnu/libnetcdf.so" )
+ else( ${python-paraview} STREQUAL "/usr/lib/python3/dist-packages/paraview/simple.py" )
+ message(STATUS "Python Paraview library found. Post processing will work in SOLVERLAB scripts.")
+ set(PRELOAD_NETCDF_ON_UBUNTU20 OFF)
+ endif( ${python-paraview} STREQUAL "/usr/lib/python3/dist-packages/paraview/simple.py" )
+endif( ${python-paraview} STREQUAL "python-paraview-NOTFOUND" )
+
#PyQt5 root dir
IF ( NOT DEFINED PYQT5_ROOT_DIR )
set(PYQT5_ROOT_DIR $ENV{PYQT5_ROOT_DIR} )
ENDIF( ENV{HDF5_ROOT_DIR} )
ENDIF( NOT HDF5_ROOT_DIR )
-
-#Paraview library paths
-set (PV_LIB_DIR /usr/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/dist-packages/paraview/:/usr/lib64/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtk/:${MATPLOTLIB_ROOT_DIR}/lib/:${PARAVIEW_LIBRARIES_DIR})
-set (PV_PYTHON_DIR /usr/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/dist-packages/paraview/:/usr/lib64/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtk/:/usr/lib64/paraview/site-packages/:/usr/lib64/paraview/site-packages/paraview/:/usr/lib64/paraview/site-packages/vtk/:/usr/lib64/paraview/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/:/usr/lib64/paraview/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/paraview/:/usr/lib64/paraview/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtkmodules:/usr/lib/paraview/site-packages/paraview:/usr/lib/paraview/site-packages/paraview/vtk:${PARAVIEW_ROOT_DIR}/lib/:${PARAVIEW_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/:${PARAVIEW_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtkmodules/:${MATPLOTLIB_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages:${PYQT5_ROOT_DIR}:${PYQT5_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages)
-
-message(STATUS "Python version found is ${Python_VERSION}")
-
# Find SWIG
IF ( DEFINED SWIG_ROOT_DIR OR DEFINED ENV{SWIG_ROOT_DIR})
IF ( DEFINED SWIG_ROOT_DIR )
@ONLY
)
-
