X-Git-Url: http://git.salome-platform.org/gitweb/?a=blobdiff_plain;f=src%2FMEDLoader%2FSwig%2FMEDLoaderTest3.py;h=f970090ea773a024612d2360233988768865d73e;hb=46ddce3caf8076fa140934bb3ce88c5d8040efb9;hp=ce9e0e076d575eea8713ddafb5b52451c582336a;hpb=2c8c59a20cc93074b62f129a940d7867aaff7f2e;p=tools%2Fmedcoupling.git diff --git a/src/MEDLoader/Swig/MEDLoaderTest3.py b/src/MEDLoader/Swig/MEDLoaderTest3.py index ce9e0e076..f970090ea 100644 --- a/src/MEDLoader/Swig/MEDLoaderTest3.py +++ b/src/MEDLoader/Swig/MEDLoaderTest3.py @@ -1,5 +1,5 @@ # -*- coding: iso-8859-1 -*- -# Copyright (C) 2007-2015 CEA/DEN, EDF R&D +# Copyright (C) 2007-2016 CEA/DEN, EDF R&D # # This library is free software; you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public @@ -17,15 +17,52 @@ # # See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com # -# Author : Anthony Geay (CEA/DEN) +# Author : Anthony Geay (EDF R&D) from MEDLoader import * import unittest import platform from math import pi,e,sqrt from MEDLoaderDataForTest import MEDLoaderDataForTest +from distutils.version import LooseVersion -class MEDLoaderTest(unittest.TestCase): +import sys +if sys.version_info.major < 3: + import cPickle as pickle +else: + import pickle + +class StdOutRedirect(object): + def __init__(self,fileName): + import os,sys + sys.stderr.flush() + self.stdoutOld=os.dup(2) + self.fdOfSinkFile=os.open(fileName,os.O_CREAT | os.O_RDWR) + fd2=os.dup2(self.fdOfSinkFile,2) + self.origPyVal=sys.stderr + class FlushFile(object): + def __init__(self,f): + self.f=f + def write(self,st): + self.f.write(st) + self.f.flush() + def flush(self): + return self.f.flush() + def isatty(self): + return self.f.isatty() + def close(self): + os.fsync(self.f) + self.f.close(); + sys.stderr=FlushFile(os.fdopen(self.fdOfSinkFile,"w")) + def __del__(self): + import os,sys + sys.stderr.close() + sys.stderr=self.origPyVal + os.fsync(2) + os.dup2(self.stdoutOld,2) + os.close(self.stdoutOld) + +class MEDLoaderTest3(unittest.TestCase): def testMEDMesh1(self): fileName="Pyfile18.med" mname="ExampleOfMultiDimW" @@ -33,10 +70,10 @@ class MEDLoaderTest(unittest.TestCase): self.assertRaises(InterpKernelException,MEDFileMesh.New,fileName,"") self.assertEqual((0,-1),medmesh.getNonEmptyLevels()) m1_0=medmesh.getLevel0Mesh(True) - m1_1=MEDLoader.ReadUMeshFromFile(fileName,mname,0) + m1_1=ReadUMeshFromFile(fileName,mname,0) self.assertTrue(m1_0.isEqual(m1_1,1e-12)); m2_0=medmesh.getLevelM1Mesh(True) - m2_1=MEDLoader.ReadUMeshFromFile(fileName,mname,-1) + m2_1=ReadUMeshFromFile(fileName,mname,-1) self.assertTrue(m2_0.isEqual(m2_1,1e-12)); pass @@ -47,23 +84,23 @@ class MEDLoaderTest(unittest.TestCase): medmesh=MEDFileUMesh.New(fileName,mname) self.assertEqual((0,),medmesh.getNonEmptyLevels()) m1_0=medmesh.getLevel0Mesh(True) - m1_1=MEDLoader.ReadUMeshFromFile(fileName,mname,0) + m1_1=ReadUMeshFromFile(fileName,mname,0) self.assertTrue(m1_0.isEqual(m1_1,1e-12)); g1_0=medmesh.getGroup(0,"mesh2",True) - g1_1=MEDLoader.ReadUMeshFromGroups(fileName,mname,0,["mesh2"]); + g1_1=ReadUMeshFromGroups(fileName,mname,0,["mesh2"]); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getGroup(0,"mesh3",True) - g1_1=MEDLoader.ReadUMeshFromGroups(fileName,mname,0,["mesh3"]); + g1_1=ReadUMeshFromGroups(fileName,mname,0,["mesh3"]); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getGroups(0,["mesh3","mesh2"]) - g1_1=MEDLoader.ReadUMeshFromGroups(fileName,mname,0,["mesh3","mesh2"]); + g1_1=ReadUMeshFromGroups(fileName,mname,0,["mesh3","mesh2"]); g1_1.setName(g1_0.getName()) self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getFamily(0,"Family_-3",True) - g1_1=MEDLoader.ReadUMeshFromFamilies(fileName,mname,0,["Family_-3"]); + g1_1=ReadUMeshFromFamilies(fileName,mname,0,["Family_-3"]); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getFamilies(0,["Family_-3","Family_-5"],True) - g1_1=MEDLoader.ReadUMeshFromFamilies(fileName,mname,0,["Family_-3","Family_-5"]); + g1_1=ReadUMeshFromFamilies(fileName,mname,0,["Family_-3","Family_-5"]); g1_1.setName(g1_0.getName()) self.assertTrue(g1_0.isEqual(g1_1,1e-12)); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); @@ -99,7 +136,7 @@ class MEDLoaderTest(unittest.TestCase): m.insertNextCell(NORM_POLYGON,4,targetConn[14:18]) m.finishInsertingCells(); m.setCoords(c) - m.checkCoherency() + m.checkConsistencyLight() m1=MEDCouplingUMesh.New(); m1.setMeshDimension(1); m1.allocateCells(3); @@ -108,7 +145,7 @@ class MEDLoaderTest(unittest.TestCase): m1.insertNextCell(NORM_SEG3,3,[2,8,5]) m1.finishInsertingCells(); m1.setCoords(c) - m1.checkCoherency() + m1.checkConsistencyLight() m2=MEDCouplingUMesh.New(); m2.setMeshDimension(0); m2.allocateCells(4); @@ -118,7 +155,7 @@ class MEDLoaderTest(unittest.TestCase): m2.insertNextCell(NORM_POINT1,1,[6]) m2.finishInsertingCells(); m2.setCoords(c) - m2.checkCoherency() + m2.checkConsistencyLight() # mm=MEDFileUMesh.New() self.assertTrue(mm.getUnivNameWrStatus()) @@ -144,10 +181,10 @@ class MEDLoaderTest(unittest.TestCase): g2_1.setName("G2") mm.setGroupsAtLevel(-1,[g1_1,g2_1],False) g1_N=DataArrayInt.New() - g1_N.setValues(range(8),8,1) + g1_N.setValues(list(range(8)),8,1) g1_N.setName("G1") g2_N=DataArrayInt.New() - g2_N.setValues(range(9),9,1) + g2_N.setValues(list(range(9)),9,1) g2_N.setName("G2") mm.setGroupsAtLevel(1,[g1_N,g2_N],False) mm.createGroupOnAll(0,"GrpOnAllCell") @@ -166,9 +203,9 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(g2_N.isEqual(t)); self.assertTrue(mm.existsGroup("GrpOnAllCell")); t=mm.getGroupArr(0,"GrpOnAllCell") - self.assertTrue(t.getValues()==range(5)) + self.assertTrue(t.getValues()==list(range(5))) # - mmCpy=mm.deepCpy() + mmCpy=mm.deepCopy() self.assertTrue(mm.isEqual(mmCpy,1e-12)[0]) ; del mm mmCpy.write(outFileName,2); # @@ -194,7 +231,7 @@ class MEDLoaderTest(unittest.TestCase): m.setName(mm.getName()) ; m.setDescription(mm.getDescription()) self.assertTrue(m.isEqual(mbis,1e-12)); # - self.assertEqual(([[(3, 2), (4, 1), (5, 8)], [(1, 2), (2, 1)], [(0, 4)]], 2, 2, 9),MEDLoader.GetUMeshGlobalInfo(outFileName,"MyFirstMEDCouplingMEDmesh")) + self.assertEqual(([[(3, 2), (4, 1), (5, 8)], [(1, 2), (2, 1)], [(0, 4)]], 2, 2, 9),GetUMeshGlobalInfo(outFileName,"MyFirstMEDCouplingMEDmesh")) pass # this test is the testMEDMesh3 except that permutation is dealed here @@ -216,7 +253,7 @@ class MEDLoaderTest(unittest.TestCase): m.insertNextCell(NORM_QUAD4,4,targetConn[14:18]) m.finishInsertingCells(); m.setCoords(c) - m.checkCoherency() + m.checkConsistencyLight() m1=MEDCouplingUMesh.New(); m1.setMeshDimension(1); m1.allocateCells(3); @@ -225,7 +262,7 @@ class MEDLoaderTest(unittest.TestCase): m1.insertNextCell(NORM_SEG2,2,[3,6]) m1.finishInsertingCells(); m1.setCoords(c) - m1.checkCoherency() + m1.checkConsistencyLight() m2=MEDCouplingUMesh.New(); m2.setMeshDimension(0); m2.allocateCells(4); @@ -235,7 +272,7 @@ class MEDLoaderTest(unittest.TestCase): m2.insertNextCell(NORM_POINT1,1,[6]) m2.finishInsertingCells(); m2.setCoords(c) - m2.checkCoherency() + m2.checkConsistencyLight() # mm=MEDFileUMesh.New() mm.setName("My2ndMEDCouplingMEDmesh") @@ -301,7 +338,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(not mm2.existsFamily("Family_-8")) mm2.createGroupOnAll(-1,"GrpOnAllFace") self.assertTrue(mm2.existsFamily("Family_-8")) - self.assertEqual(range(3),mm2.getGroupArr(-1,"GrpOnAllFace").getValues()) + self.assertEqual(list(range(3)),mm2.getGroupArr(-1,"GrpOnAllFace").getValues()) pass #testing persistence of retrieved arrays @@ -381,11 +418,11 @@ class MEDLoaderTest(unittest.TestCase): m.setRenumFieldArr(-1,n1) m.setRenumFieldArr(-2,n0) nbOfFams=len(fns) - for i in xrange(nbOfFams): + for i in range(nbOfFams): m.addFamily(fns[i],fids[i]) pass nbOfGrps=len(grpns) - for i in xrange(nbOfGrps): + for i in range(nbOfGrps): m.setFamiliesIdsOnGroup(grpns[i],famIdsPerGrp[i]) pass m.setName(m2.getName()) @@ -439,7 +476,7 @@ class MEDLoaderTest(unittest.TestCase): mm.write("Pyfile19_bis.med",2) ff=MEDFileFieldMultiTS.New("Pyfile19.med") ff.write("Pyfile19_bis.med",0) - self.assertEqual([('tyty','mm'),('uiop','MW')],MEDLoader.GetComponentsNamesOfField("Pyfile19_bis.med","VFieldOnNodes")) + self.assertEqual([('tyty','mm'),('uiop','MW')],GetComponentsNamesOfField("Pyfile19_bis.med","VFieldOnNodes")) pass #gauss points @@ -450,7 +487,7 @@ class MEDLoaderTest(unittest.TestCase): ff.write("Pyfile13_bis.med",0) ff=MEDFileField1TS.New("Pyfile13.med","MyFirstFieldOnGaussPoint",1,5) f=ff.getFieldAtLevel(ON_GAUSS_PT,0) - f2=MEDLoader.ReadFieldGauss("Pyfile13.med",'2DMesh_2',0,'MyFirstFieldOnGaussPoint',1,5) + f2=ReadFieldGauss("Pyfile13.med",'2DMesh_2',0,'MyFirstFieldOnGaussPoint',1,5) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) ff3=MEDFileField1TS.New("Pyfile13.med","MyFirstFieldOnGaussPoint") f3=ff3.getFieldAtLevel(ON_GAUSS_PT,0) @@ -468,7 +505,7 @@ class MEDLoaderTest(unittest.TestCase): ff.write("Pyfile14_bis.med",0) ff=MEDFileField1TS.New("Pyfile14.med","MyFieldOnGaussNE",1,5) f=ff.getFieldAtLevel(ON_GAUSS_NE,0) - f2=MEDLoader.ReadFieldGaussNE("Pyfile14.med",'2DMesh_2',0,"MyFieldOnGaussNE",1,5) + f2=ReadFieldGaussNE("Pyfile14.med",'2DMesh_2',0,"MyFieldOnGaussNE",1,5) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) pass @@ -476,14 +513,14 @@ class MEDLoaderTest(unittest.TestCase): def testMEDField5(self): ff=MEDFileField1TS.New("Pyfile17.med","MeasureOfMesh_Extruded",1,2) f=ff.getFieldAtLevel(ON_CELLS,0) - f2=MEDLoader.ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) + f2=ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) self.assertTrue(f.getMesh().getCoords().isEqual(f2.getMesh().getCoords(),1e-12)) f.getMesh().tryToShareSameCoords(f2.getMesh(),1e-12) f.changeUnderlyingMesh(f2.getMesh(),22,1e-12) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) # no with renumbering f=ff.getFieldAtLevel(ON_CELLS,0,1) - f2=MEDLoader.ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) + f2=ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) f=ff.getFieldAtLevel(ON_CELLS,0,3) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) @@ -499,12 +536,12 @@ class MEDLoaderTest(unittest.TestCase): its=ff.getIterations() self.assertRaises(InterpKernelException,ff.getFieldAtLevel,ON_CELLS,its[0][0],its[0][1],0)# request on cell and it is not on cells f=ff.getFieldAtLevel(ON_NODES,its[0][0],its[0][1],0) - f2=MEDLoader.ReadFieldNode("Pyfile7.med",'3DSurfMesh_1',0,"VectorFieldOnNodes",its[0][0],its[0][1]) + f2=ReadFieldNode("Pyfile7.med",'3DSurfMesh_1',0,"VectorFieldOnNodes",its[0][0],its[0][1]) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) ff=MEDFileFieldMultiTS.New("Pyfile19.med","VFieldOnNodes") its=ff.getIterations() f=ff.getFieldAtLevel(ON_NODES,its[0][0],its[0][1],0) - f2=MEDLoader.ReadFieldNode("Pyfile19.med",'2DMesh_1',0,"VFieldOnNodes",its[0][0],its[0][1]) + f2=ReadFieldNode("Pyfile19.med",'2DMesh_1',0,"VFieldOnNodes",its[0][0],its[0][1]) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) self.assertRaises(InterpKernelException,ff.getFieldAtLevel,ON_CELLS,its[0][0],its[0][1],0)# request on cell and it is not on cells self.assertRaises(InterpKernelException,ff.getFieldAtLevel,ON_NODES,its[0][0],its[0][1],0,1)#request renumber following mesh : it is on profile ! @@ -515,7 +552,7 @@ class MEDLoaderTest(unittest.TestCase): ff=MEDFileFieldMultiTS.New("Pyfile12.med","VectorFieldOnCells") its=ff.getIterations() f=ff.getFieldAtLevel(ON_CELLS,its[0][0],its[0][1],0) - f2=MEDLoader.ReadFieldCell("Pyfile12.med",'3DMesh_1',0,"VectorFieldOnCells",its[0][0],its[0][1]) + f2=ReadFieldCell("Pyfile12.med",'3DMesh_1',0,"VectorFieldOnCells",its[0][0],its[0][1]) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) pass @@ -532,13 +569,17 @@ class MEDLoaderTest(unittest.TestCase): ff1=MEDFileField1TS.New() ff1.setFieldNoProfileSBT(f1) ff1.write(fname,0) - f2=MEDLoader.ReadFieldCell(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]); + f2=ReadFieldCell(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]); itt,orr,ti=ff1.getTime() self.assertEqual(0,itt); self.assertEqual(1,orr); self.assertAlmostEqual(2.,ti,14); self.assertTrue(f1.isEqual(f2,1e-12,1e-12)) ff1.setTime(3,4,2.3) itt,orr,ti=ff1.getTime() self.assertEqual(3,itt); self.assertEqual(4,orr); self.assertAlmostEqual(2.3,ti,14); + f1.setTime(5.5,7,8) + ff1.copyTimeInfoFrom(f1) + itt,orr,ti=ff1.getTime() + self.assertEqual(7,itt); self.assertEqual(8,orr); self.assertAlmostEqual(5.5,ti,14); da,infos=ff1.getUndergroundDataArrayExt() f2.getArray().setName(da.getName())#da has the same name than f2 self.assertTrue(da.isEqual(f2.getArray(),1e-12)) @@ -557,7 +598,7 @@ class MEDLoaderTest(unittest.TestCase): nv=1456. da=ff1.getUndergroundDataArray().setIJ(0,0,nv) ff1.write(fname,0) - f2=MEDLoader.ReadFieldNode(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) + f2=ReadFieldNode(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) self.assertTrue(not f1.isEqual(f2,1e-12,1e-12)) f1.getArray().setIJ(0,0,nv) self.assertTrue(f1.isEqual(f2,1e-12,1e-12)) @@ -573,7 +614,7 @@ class MEDLoaderTest(unittest.TestCase): ff1=MEDFileField1TS.New() ff1.setFieldNoProfileSBT(f1) ff1.write(fname,0) - f2=MEDLoader.ReadFieldGaussNE(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) + f2=ReadFieldGaussNE(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) self.assertTrue(f1.isEqual(f2,1e-12,1e-12)) da,infos=ff1.getUndergroundDataArrayExt() f2.getArray().setName(da.getName())#da has the same name than f2 @@ -582,9 +623,9 @@ class MEDLoaderTest(unittest.TestCase): # fname="Pyfile28.med" f1=MEDLoaderDataForTest.buildVecFieldOnGauss_2_Simpler(); - f1InvalidCpy=f1.deepCpy() + f1InvalidCpy=f1.deepCopy() f1InvalidCpy.setDiscretization(MEDCouplingFieldDiscretizationGauss()) - f1InvalidCpy2=f1.deepCpy() + f1InvalidCpy2=f1.deepCopy() f1InvalidCpy2.setDiscretization(MEDCouplingFieldDiscretizationGauss()) m1=f1.getMesh() mm1=MEDFileUMesh.New() @@ -644,7 +685,7 @@ class MEDLoaderTest(unittest.TestCase): f21=m2.getMeasureField(True) ; f21.setName("f21") ; f21=f21.buildNewTimeReprFromThis(ONE_TIME,False) f21.getArray().setInfoOnComponent(0,"sta [mm]") ; ff21.appendFieldNoProfileSBT(f21) - f22=f21.deepCpy() ; f22.setName("f22") ; f22=f22.buildNewTimeReprFromThis(ONE_TIME,False) ; + f22=f21.deepCopy() ; f22.setName("f22") ; f22=f22.buildNewTimeReprFromThis(ONE_TIME,False) ; f22.applyFunc(2,"3*x*IVec+2*x*JVec") f22.getArray().setInfoOnComponent(0,"distance [km]") ; f22.getArray().setInfoOnComponent(1,"displacement [cm]") ff22.appendFieldNoProfileSBT(f22) @@ -687,7 +728,7 @@ class MEDLoaderTest(unittest.TestCase): # ff1.setFieldProfile(f1,mm1,0,da) ff1.changePflsNames([(["sup1_NORM_QUAD4"],"ForV650")]) - ff1=ff1.deepCpy() + ff1=ff1.deepCopy() ff1.write(fname,0) # vals,pfl=ff1.getFieldWithProfile(ON_CELLS,0,mm1) ; vals.setName("") @@ -727,7 +768,7 @@ class MEDLoaderTest(unittest.TestCase): ff1.appendFieldProfile(f1,mm1,0,da) f1.setTime(1.2,1,2) ; e=d.applyFunc("2*x") ; e.copyStringInfoFrom(d) ; f1.setArray(e) ; ff1.appendFieldProfile(f1,mm1,0,da) - ff1=ff1.deepCpy() + ff1=ff1.deepCopy() ff1.write(fname,0) # vals,pfl=ff1.getFieldWithProfile(ON_CELLS,1,2,0,mm1) ; vals.setName("") @@ -812,7 +853,7 @@ class MEDLoaderTest(unittest.TestCase): m1=MEDLoaderDataForTest.build2DMesh_1() m1.renumberCells([0,1,4,2,3,5],False) tmp=m1.getName(); - m1=m1.buildPartOfMySelf(range(5),True) ; m1.setName(tmp) # suppression of last cell that is a polygon + m1=m1.buildPartOfMySelf(list(range(5)),True) ; m1.setName(tmp) # suppression of last cell that is a polygon mm1=MEDFileUMesh.New() ; mm1.setCoords(m1.getCoords()) ; mm1.setMeshAtLevel(0,m1) ; mm1.write(fname,2) ff1=MEDFileField1TS.New() @@ -839,7 +880,7 @@ class MEDLoaderTest(unittest.TestCase): m1=MEDLoaderDataForTest.build2DMesh_1() m1.renumberCells([0,1,4,2,3,5],False) tmp=m1.getName(); - m1=m1.buildPartOfMySelf(range(5),True) ; m1.setName(tmp) # suppression of last cell that is a polygon + m1=m1.buildPartOfMySelf(list(range(5)),True) ; m1.setName(tmp) # suppression of last cell that is a polygon mm1=MEDFileUMesh.New() ; mm1.setCoords(m1.getCoords()) ; mm1.setMeshAtLevel(0,m1) ; mm1.write(fname,2) ff1=MEDFileFieldMultiTS.New() @@ -871,7 +912,7 @@ class MEDLoaderTest(unittest.TestCase): pass # Tricky test of the case of in a MED file containing a Field on GAUSS_NE is lying on a profile that is reality represents all the geom entities of a level. # By default when using setFieldProfile method such profile is not created because it is not useful ! So here a trick is used to force MEDLoader to do that - # for the necessity of the test ! The idea is too create artificially a mesh having one more fictious cell per type and to roll back right after ! + # for the necessity of the test ! The idea is too create artificially a mesh having one more fictitious cell per type and to roll back right after ! def testMEDField15(self): fname="Pyfile36.med" m0=MEDLoaderDataForTest.build2DMesh_1() @@ -886,13 +927,12 @@ class MEDLoaderTest(unittest.TestCase): da=DataArrayInt.New(); da.setValues([0,1,3,4,6],5,1) ; da.setName("sup1NodeElt") # ff1.setFieldProfile(f1,mm1,0,da) - m1=m0.buildPartOfMySelf(range(5),True) ; m1.setName(tmp) ; mm1.setMeshAtLevel(0,m1) ; + m1=m0.buildPartOfMySelf(list(range(5)),True) ; m1.setName(tmp) ; mm1.setMeshAtLevel(0,m1) ; mm1.write(fname,2) ff1.write(fname,0) f1=ff1.getFieldOnMeshAtLevel(ON_GAUSS_NE,m1,0) f2,p1=ff1.getFieldWithProfile(ON_GAUSS_NE,0,mm1) ; f2.setName("") - self.assertTrue(p1.isIdentity()) - self.assertEqual(5,p1.getNumberOfTuples()) + self.assertTrue(p1.isIota(5)) self.assertTrue(f1.getArray().isEqual(f2,1e-12)) pass # Test for getFieldAtTopLevel method @@ -961,7 +1001,7 @@ class MEDLoaderTest(unittest.TestCase): ff1.appendFieldProfile(f1,mm1,0,da) ffs.resize(1) ffs.setFieldAtPos(0,ff1) - ffs=ffs.deepCpy() + ffs=ffs.deepCopy() ffs.write(fname,0) # ffsr=MEDFileFields.New(fname) @@ -1057,7 +1097,7 @@ class MEDLoaderTest(unittest.TestCase): ff1.setFieldNoProfileSBT(f1) ff1.write(fname,0) # writing mesh1 and field1, now creation of mesh2 and field2 - f2=f1.deepCpy() + f2=f1.deepCopy() m2=f2.getMesh() m2.translate([0.5,0.6,0.7]) m2.setName("3DSurfMesh_2") @@ -1071,9 +1111,9 @@ class MEDLoaderTest(unittest.TestCase): ff2.setFieldNoProfileSBT(f2) ff2.write(fname,0) # - f3=MEDLoader.ReadFieldCell(fname,"3DSurfMesh_1",0,"VectorFieldOnCells",0,1) + f3=ReadFieldCell(fname,"3DSurfMesh_1",0,"VectorFieldOnCells",0,1) self.assertTrue(f3.isEqual(f1,1e-12,1e-12)) - f4=MEDLoader.ReadFieldCell(fname,"3DSurfMesh_2",0,"VectorFieldOnCells2",0,1) + f4=ReadFieldCell(fname,"3DSurfMesh_2",0,"VectorFieldOnCells2",0,1) self.assertTrue(f4.isEqual(f2,1e-12,1e-12)) pass @@ -1095,7 +1135,7 @@ class MEDLoaderTest(unittest.TestCase): da2.iota(7.) da2.rearrange(len(compNames1)) da2.setInfoOnComponents(compNames1) - f2=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f2.setName(FieldName1) ; f2.setArray(da2) ; f2.setMesh(m2) ; f2.checkCoherency() + f2=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f2.setName(FieldName1) ; f2.setArray(da2) ; f2.setMesh(m2) ; f2.checkConsistencyLight() ff1.setFieldNoProfileSBT(f2) self.assertEqual(ff1.getNonEmptyLevels(),(2, [0])) da0=DataArrayDouble.New() @@ -1103,7 +1143,7 @@ class MEDLoaderTest(unittest.TestCase): da0.iota(190.) da0.rearrange(len(compNames1)) da0.setInfoOnComponents(compNames1) - f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName1) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkCoherency() + f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName1) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkConsistencyLight() ff1.setFieldNoProfileSBT(f0) self.assertEqual(ff1.getNonEmptyLevels(),(2, [0,-2])) da1=DataArrayDouble.New() @@ -1111,7 +1151,7 @@ class MEDLoaderTest(unittest.TestCase): da1.iota(90.) da1.rearrange(len(compNames1)) da1.setInfoOnComponents(compNames1) - f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName1) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkCoherency() + f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName1) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkConsistencyLight() ff1.setFieldNoProfileSBT(f1) self.assertEqual(ff1.getNonEmptyLevels(),(2, [0,-1,-2])) # @@ -1125,7 +1165,7 @@ class MEDLoaderTest(unittest.TestCase): da0.iota(-190.) da0.rearrange(2) da0.setInfoOnComponents(compNames2) - f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName2) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkCoherency() + f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName2) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkConsistencyLight() ff2.setFieldNoProfileSBT(f0) self.assertEqual(ff2.getNonEmptyLevels(),(0, [0])) da1=DataArrayDouble.New() @@ -1133,7 +1173,7 @@ class MEDLoaderTest(unittest.TestCase): da1.iota(-90.) da1.rearrange(len(compNames2)) da1.setInfoOnComponents(compNames2) - f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName2) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkCoherency() + f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName2) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkConsistencyLight() ff2.setFieldNoProfileSBT(f1) self.assertEqual(ff2.getNonEmptyLevels(),(1, [0,-1])) # @@ -1173,11 +1213,11 @@ class MEDLoaderTest(unittest.TestCase): expected1=[1.,10.,100.,2.,20.,200.] nodeCoordsWithValue1=[10.,2.5,0.] nodeCoordsWithValue2=[10.,3.75,0.] - for i in xrange(3): + for i in range(3): self.assertAlmostEqual(nodeCoordsWithValue1[i],tes0.getMesh().getCoordinatesOfNode(0)[i],13); self.assertAlmostEqual(nodeCoordsWithValue2[i],tes0.getMesh().getCoordinatesOfNode(1)[i],13); pass - for i in xrange(6): + for i in range(6): self.assertAlmostEqual(expected1[i],tes0.getArray().getIJ(0,i),13); pass del tes0 @@ -1191,7 +1231,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual([0,2,4],tes1.getMesh().getNodalConnectivityIndex().getValues()) self.assertEqual(2,tes1.getArray().getNumberOfTuples()) self.assertEqual(3,tes1.getArray().getNumberOfComponents()) - for i in xrange(6): + for i in range(6): self.assertAlmostEqual(expected1[i],tes1.getArray().getIJ(0,i),13); pass m.write(fname,2) @@ -1210,11 +1250,11 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(2,tes2.getArray().getNumberOfTuples()) self.assertEqual(3,tes2.getArray().getNumberOfComponents()) expected2=[2.,20.,200.,1.,10.,100.] - for i in xrange(3): + for i in range(3): self.assertAlmostEqual(nodeCoordsWithValue1[i],tes2.getMesh().getCoordinatesOfNode(0)[i],13); self.assertAlmostEqual(nodeCoordsWithValue2[i],tes2.getMesh().getCoordinatesOfNode(1)[i],13); pass - for i in xrange(6): + for i in range(6): self.assertAlmostEqual(expected2[i],tes2.getArray().getIJ(0,i),13);#compare tes2 and tes3 pass # @@ -1227,7 +1267,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual([0,2,4],tes3.getMesh().getNodalConnectivityIndex().getValues()) self.assertEqual(2,tes3.getArray().getNumberOfTuples()) self.assertEqual(3,tes3.getArray().getNumberOfComponents()) - for i in xrange(6): + for i in range(6): self.assertAlmostEqual(expected1[i],tes3.getArray().getIJ(0,i),13); pass pass @@ -1374,6 +1414,119 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(delta.getMaxValue()[0]<1e-12) mm.write(fname,2) + def testBuildInnerBoundaryAlongM1Group4(self): + """ Test case where cells touch the M1 group on some nodes only and not on full egdes (triangle mesh for ex) + """ + coo = DataArrayDouble([0.,0., 1.,0., 2.,0., 3.,0., + 0.,1., 1.,1., 2.,1., 3.,1., + 0.,2., 1.,2., 2.,2., 3.,2.], 12, 2) + conn = [3,0,4,1, 3,1,4,5, + 3,5,9,10, 3,5,10,6, + 3,2,6,7, 3,2,7,3, + 3,4,8,9, 3,4,9,5, + 3,1,5,6, 3,1,6,2, + 3,6,10,11,3,6,11,7] + # Only TRI3: + connI = DataArrayInt() + connI.alloc(13, 1); connI.iota(); connI *= 4 + m2 = MEDCouplingUMesh("2D", 2) + m2.setCoords(coo) + m2.setConnectivity(DataArrayInt(conn), connI) + m2.checkConsistency() + m1, _, _, _, _ = m2.buildDescendingConnectivity() + grpIds = DataArrayInt([9,11]); grpIds.setName("group") + grpIds2 = DataArrayInt([0,1]); grpIds2.setName("group2") + mfu = MEDFileUMesh() + mfu.setMeshAtLevel(0, m2) + mfu.setMeshAtLevel(-1, m1) + mfu.setGroupsAtLevel(-1, [grpIds, grpIds2]) + nNod = m2.getNumberOfNodes() + nodesDup, cells1, cells2 = mfu.buildInnerBoundaryAlongM1Group("group") + m2_bis = mfu.getMeshAtLevel(0) + m2_bis.checkConsistency() + m1_bis = mfu.getMeshAtLevel(-1) + m1_bis.checkConsistency() + self.assertEqual(nNod+2, mfu.getNumberOfNodes()) + self.assertEqual(nNod+2, m2_bis.getNumberOfNodes()) + self.assertEqual(nNod+2, m1_bis.getNumberOfNodes()) + self.assertEqual([6,7], nodesDup.getValues()) + self.assertEqual([2.,1., 3.,1.], m2_bis.getCoords()[nNod:].getValues()) + self.assertEqual(set([3,10,11]), set(cells1.getValues())) + self.assertEqual(set([8,9,4,5]), set(cells2.getValues())) + self.assertEqual([9,11],mfu.getGroupArr(-1,"group").getValues()) + self.assertEqual([23,24],mfu.getGroupArr(-1,"group_dup").getValues()) + self.assertEqual([0,1],mfu.getGroupArr(-1,"group2").getValues()) +# mfu.getMeshAtLevel(0).writeVTK("/tmp/mfu_M0.vtu") + ref0 =[3, 5, 10, 12, 3, 12, 10, 11, 3, 12, 11, 13] + ref1 =[3, 2, 6, 7, 3, 2, 7, 3, 3, 1, 5, 6, 3, 1, 6, 2] + self.assertEqual(ref0,mfu.getMeshAtLevel(0)[[3,10,11]].getNodalConnectivity().getValues()) + self.assertEqual(ref1,mfu.getMeshAtLevel(0)[[4,5,8,9]].getNodalConnectivity().getValues()) + self.assertRaises(InterpKernelException,mfu.getGroup(-1,"group_dup").checkGeoEquivalWith,mfu.getGroup(-1,"group"),2,1e-12) # Grp_dup and Grp are not equal considering connectivity only + mfu.getGroup(-1,"group_dup").checkGeoEquivalWith(mfu.getGroup(-1,"group"),12,1e-12)# Grp_dup and Grp are equal considering connectivity and coordinates + m_bis0 = mfu.getMeshAtLevel(-1) + m_desc, _, _, _, _ = m_bis0.buildDescendingConnectivity() + m_bis0.checkDeepEquivalOnSameNodesWith(mfu.getMeshAtLevel(-1), 2, 9.9999999) + + def testBuildInnerBoundary5(self): + """ Full 3D test with tetras only. In this case a tri from the group is not duplicated because it is made only + of non duplicated nodes. The tri in question is hence not part of the final new "dup" group. """ + coo = DataArrayDouble([200.0, 200.0, 0.0, 200.0, 200.0, 200.0, 200.0, 0.0, 200.0, 200.0, 0.0, 0.0, 0.0, 200.0, 0.0, 0.0, 200.0, 200.0, 0.0, 0.0, 0.0, 0.0, 0.0, + 200.0, 400.0, 200.0, 0.0, 400.0, 200.0, 200.0, 400.0, 0.0, 0.0, 400.0, 0.0, 200.0, 0.0, 100.00000000000016, 200.0, 63.15203310314546, 200.0, 200.0, 134.45205700643342, + 200.0, 200.0, 200.0, 100.00000000000016, 200.0, 63.15203310314546, 0.0, 200.0, 134.45205700643342, 0.0, 200.0, 0.0, 100.00000000000016, 0.0, 63.15203310314546, + 200.0, 0.0, 134.45205700643342, 200.0, 0.0, 200.0, 100.00000000000016, 0.0, 63.15203310314546, 0.0, 0.0, 134.45205700643342, 0.0, 0.0, 200.0, 200.0, 100.02130053568538, + 0.0, 200.0, 100.00938163175135, 200.0, 0.0, 100.02130053568538, 0.0, 0.0, 100.00938163175135, 299.3058739933347, 200.0, 200.0, 400.0, 98.68100542924483, + 200.0, 302.8923433403344, 0.0, 200.0, 302.8923433403344, 200.0, 0.0, 400.0, 100.00000000000016, 0.0, 302.8923433403344, 0.0, 0.0, 400.0, 200.0, 98.55126825835082, + 400.0, 0.0, 100.02162286181577, 99.31624553977466, 99.99999998882231, 200.0, 99.31624576683302, 100.00000010178034, 0.0, 99.31624560596512, 200.0, 100.0050761312483, + 99.31624560612883, 0.0, 100.00507613125338, 200.0, 99.99999995813045, 100.00950673487786, 0.0, 99.99999989928207, 100.0041870621175, 301.29063354383015, + 100.0000000093269, 0.0, 301.29063360689975, 0.0, 100.00957769061164, 140.52853868782435, 99.99999963972768, 100.00509135751312, 297.87779091770784, + 97.16750463405486, 97.18018457127863], 46, 3) + c0 = [14, 45, 31, 21, 42, 14, 37, 38, 20, 44, 14, 39, 36, 41, 44, 14, 5, 25, 12, 13, 14, 38, 36, 44, 41, 14, 21, 20, 24, 44, 14, 38, 25, 41, 19, 14, 37, 38, 44, 41, 14, 16, 27, + 39, 41, 14, 21, 45, 26, 40, 14, 39, 37, 44, 41, 14, 14, 15, 24, 44, 14, 25, 38, 41, 13, 14, 27, 18, 6, 22, 14, 38, 36, 41, 13, 14, 44, 14, 15, 36, 14, 44, 23, 39, 26, 14, + 21,26, 23, 44, 14, 38, 44, 14, 24, 14, 39, 37, 41, 22, 14, 21, 33, 45, 42, 14, 27, 22, 39, 41, 14, 23, 26, 21, 3, 14, 27, 18, 22, 41, 14, 39, 36, 44, 17, 14, 21, 26, 44, 40, + 14, 39, 37, 22, 23, 14, 37, 38, 41, 19, 14, 25, 12, 13, 41, 14, 30, 26, 43, 45, 14, 38, 36, 13, 14, 14, 12, 36, 13, 41, 14, 20, 44, 21, 37, 14, 16, 36, 12, 41, 14, 39, 36, + 17, 16, 14, 44, 20, 24, 38, 14, 27, 16, 12, 41, 14, 26, 15, 17, 44, 14, 19, 18, 41, 37, 14, 40, 45, 26, 15, 14, 37, 38, 19, 20, 14, 17, 15, 26, 2, 14, 39, 36, 16, 41, 14, + 24, 21, 44, 40, 14, 16, 7, 27, 12, 14, 22, 18, 37, 41, 14, 21, 31, 45, 24, 14, 44, 40, 15, 24, 14, 24, 45, 15, 28, 14, 44, 40, 26, 15, 14, 24, 20, 21, 0, 14, 38, 36, 14, + 44, 14, 39, 37, 23, 44, 14, 45, 31, 42, 32, 14, 25, 18, 19, 4, 14, 36, 44, 17, 15, 14, 25, 19, 18, 41, 14, 24, 15, 14, 1, 14, 45, 24, 34, 28, 14, 35, 45, 30, 43, 14, 17, + 44, 39, 26, 14, 44, 23, 21, 37, 14, 30, 45, 29, 15, 14, 45, 35, 33, 43, 14, 30, 15, 26, 45, 14, 31, 21, 0, 24, 14, 33, 35, 32, 10, 14, 29, 45, 34, 28, 14, 32, 45, 34, + 29, 14, 45, 31, 32, 34, 14, 33, 26, 45, 43, 14, 45, 31, 34, 24, 14, 33, 26, 21, 45, 14, 11, 30, 35, 29, 14, 33, 35, 45, 32, 14, 33, 45, 42, 32, 14, 32, 8, 34, 31, 14, + 21, 26, 33, 3, 14, 35, 45, 32, 29, 14, 29, 34, 9, 28, 14, 15, 45, 24, 40, 14, 29, 45, 28, 15, 14, 21, 24, 45, 40, 14, 24, 15, 1, 28, 14, 35, 45, 29, 30, 14, 26, 15, + 30, 2] + cI0 = [0, 5, 10, 15, 20, 25, 30, 35, 40, 45, 50, 55, 60, 65, 70, 75, 80, 85, 90, 95, 100, 105, 110, 115, 120, 125, 130, 135, 140, 145, 150, 155, 160, 165, 170, 175, 180, 185, + 190, 195, 200, 205, 210, 215, 220, 225, 230, 235, 240, 245, 250, 255, 260, 265, 270, 275, 280, 285, 290, 295, 300, 305, 310, 315, 320, 325, 330, 335, 340, 345, 350, 355, + 360, 365, 370, 375, 380, 385, 390, 395, 400, 405, 410, 415, 420, 425, 430] + m3 = MEDCouplingUMesh("3D", 3) + m3.setCoords(coo) + m3.setConnectivity(DataArrayInt(c0), DataArrayInt(cI0)) + m3.checkConsistency() + m2, _, _, _, _ = m3.buildDescendingConnectivity() + grpIds = DataArrayInt([36,74]); grpIds.setName("group") + mfu = MEDFileUMesh() + mfu.setMeshAtLevel(0, m3) + mfu.setMeshAtLevel(-1, m2) + grpIds3D = DataArrayInt([0,1]); grpIds3D.setName("group_3d") + mfu.setGroupsAtLevel(0, [grpIds3D]) # just to check preservation of 3D group + mfu.setGroupsAtLevel(-1, [grpIds]) + nNod = m3.getNumberOfNodes() + nodesDup, cells1, cells2 = mfu.buildInnerBoundaryAlongM1Group("group") + m3_bis = mfu.getMeshAtLevel(0) + m3_bis.checkConsistency() + m2_bis = mfu.getMeshAtLevel(-1) + m2_bis.checkConsistency() + self.assertEqual(nNod+1, mfu.getNumberOfNodes()) + self.assertEqual(nNod+1, m3_bis.getNumberOfNodes()) + self.assertEqual(nNod+1, m2_bis.getNumberOfNodes()) + self.assertEqual([3], nodesDup.getValues()) + self.assertEqual(m3_bis.getCoords()[3].getValues(), m3_bis.getCoords()[nNod:].getValues()) + self.assertEqual(set([22]), set(cells1.getValues())) + self.assertEqual(set([77]), set(cells2.getValues())) + self.assertEqual([36,74],mfu.getGroupArr(-1,"group").getValues()) + self.assertEqual([0,1],mfu.getGroupArr(0,"group_3d").getValues()) + self.assertEqual([213],mfu.getGroupArr(-1,"group_dup").getValues()) # here only one cell has been duplicated + m_bis0 = mfu.getMeshAtLevel(-1) + m_desc, _, _, _, _ = m_bis0.buildDescendingConnectivity() + m_bis0.checkDeepEquivalOnSameNodesWith(mfu.getMeshAtLevel(-1), 2, 9.9999999) + pass + def testBasicConstructors(self): fname="Pyfile18.med" m=MEDFileMesh.New(fname) @@ -1415,7 +1568,7 @@ class MEDLoaderTest(unittest.TestCase): fname="Pyfile46.med" m=MEDLoaderDataForTest.build2DMesh_3() m=m[:10] ; m.setName("mesh") - f=m.getMeasureField(ON_CELLS) + f=m.getMeasureField(False) f=f.buildNewTimeReprFromThis(ONE_TIME,False) f.setTime(5.5,3,4) f.setName("SemiPartialField") @@ -1434,8 +1587,8 @@ class MEDLoaderTest(unittest.TestCase): fread=ff2.getFieldOnMeshAtLevel(ON_CELLS,0,mm) fread2=ff2.getFieldAtLevel(ON_CELLS,0) # - fread.checkCoherency() - fread2.checkCoherency() + fread.checkConsistencyLight() + fread2.checkConsistencyLight() self.assertTrue(fread.isEqual(f1,1e-12,1e-12)) self.assertTrue(fread2.isEqual(f1,1e-12,1e-12)) pass @@ -1531,20 +1684,20 @@ class MEDLoaderTest(unittest.TestCase): coords=DataArrayDouble([0.,0.,0.,1.,1.,1.,1.,0.,0.,0.5,0.5,1.,1.,0.5,0.5,0.],8,2) mQ8=MEDCouplingUMesh("",2) ; mQ8.setCoords(coords) mQ8.allocateCells(1) - mQ8.insertNextCell(NORM_QUAD8,range(8)) + mQ8.insertNextCell(NORM_QUAD8,list(range(8))) mQ8.finishInsertingCells() mQ4=MEDCouplingUMesh("",2) ; mQ4.setCoords(coords) mQ4.allocateCells(1) - mQ4.insertNextCell(NORM_QUAD4,range(4)) + mQ4.insertNextCell(NORM_QUAD4,list(range(4))) mQ4.finishInsertingCells() mT3=MEDCouplingUMesh("",2) ; mT3.setCoords(coords) mT3.allocateCells(1) - mT3.insertNextCell(NORM_TRI3,range(3)) + mT3.insertNextCell(NORM_TRI3,list(range(3))) mT3.finishInsertingCells() tr=[[0.,4.],[2.,4.],[4.,4.],[6.,4.],[8.,4.],[10.,4.],[12.,4.],[14.,4.],[16.,4.],[18.,4.],[20.,4.],[0.,0.],[2.,0.], [0.,2.],[2.,2.],[4.,2.],[6.,2.],[8.,2.],[10.,2.],[12.,2.]] ms=11*[mT3]+2*[mQ4]+7*[mQ8] - ms[:]=(elt.deepCpy() for elt in ms) + ms[:]=(elt.deepCopy() for elt in ms) for m,t in zip(ms,tr): d=m.getCoords() ; d+= t pass @@ -1559,12 +1712,12 @@ class MEDLoaderTest(unittest.TestCase): da=DataArrayDouble(34) ; da.iota(3.) f.setArray(da) f.setName("fieldCellOnPflWithoutPfl") - fInvalid=f.deepCpy() + fInvalid=f.deepCopy() f.setGaussLocalizationOnCells([0,1,2,3,4,5,6,7,8],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7],[0.8,0.2]) f.setGaussLocalizationOnCells([9,10],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7,0.8,0.8],[0.8,0.07,0.13]) f.setGaussLocalizationOnCells([11,12],[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8,0.8,0.8],[0.8,0.07,0.1,0.01,0.02]) - f.checkCoherency() - fInvalid2=fInvalid.deepCpy() + f.checkConsistencyLight() + fInvalid2=fInvalid.deepCopy() fInvalid2.getDiscretization().setArrayOfDiscIds(f.getDiscretization().getArrayOfDiscIds()) # mm=MEDFileUMesh() @@ -1572,7 +1725,7 @@ class MEDLoaderTest(unittest.TestCase): mm.write(fname,2) # f1ts=MEDFileField1TS.New() - pfl=DataArrayInt(range(13)) ; pfl.setName("pfl") + pfl=DataArrayInt(list(range(13))) ; pfl.setName("pfl") self.assertRaises(InterpKernelException,f1ts.setFieldProfile,fInvalid,mm,0,pfl) # fails because no Gauss localization per cell set ! self.assertRaises(InterpKernelException,f1ts.setFieldProfile,fInvalid2,mm,0,pfl) # fails because no Gauss localization set whereas gauss locid per cell given ! f1ts.setFieldProfile(f,mm,0,pfl) @@ -1593,12 +1746,12 @@ class MEDLoaderTest(unittest.TestCase): f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) f2=f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) - f2_bis=MEDLoader.ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) - f2_bis.checkCoherency() + f2_bis=ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + f2_bis.checkConsistencyLight() self.assertTrue(f.isEqual(f2_bis,1e-12,1e-12)) # - MEDLoader.WriteField(fname2,f,True) - f2_ter=MEDLoader.ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + WriteField(fname2,f,True) + f2_ter=ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) self.assertTrue(f.isEqual(f2_ter,1e-12,1e-12)) ## Use case 2 : Pfl on part tri3 with 2 disc and on part quad8 with 1 disc f=MEDCouplingFieldDouble.New(ON_GAUSS_PT,ONE_TIME) @@ -1612,7 +1765,7 @@ class MEDLoaderTest(unittest.TestCase): f.setGaussLocalizationOnCells([0,1,3],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7],[0.8,0.2]) f.setGaussLocalizationOnCells([2,4,5],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7,0.8,0.8],[0.8,0.07,0.13]) f.setGaussLocalizationOnCells([6,7,8,9],[0.,0.,1.,0.,1.,1.,0.,1.,0.5,0.,1.,0.5,0.5,1.,0.,0.5],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8,0.8,0.8],[0.8,0.07,0.1,0.01,0.02]) - f.checkCoherency() + f.checkConsistencyLight() # mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) @@ -1631,12 +1784,12 @@ class MEDLoaderTest(unittest.TestCase): f3=f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) f3.renumberCells([0,1,3,2,4,5,6,7,8,9]) self.assertTrue(f.isEqual(f3,1e-12,1e-12)) - f3_bis=MEDLoader.ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + f3_bis=ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_bis.renumberCells([0,1,3,2,4,5,6,7,8,9]) self.assertTrue(f.isEqual(f3_bis,1e-12,1e-12)) # - MEDLoader.WriteField(fname2,f,True) - f3_ter=MEDLoader.ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + WriteField(fname2,f,True) + f3_ter=ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_ter.renumberCells([0,1,3,2,4,5,6,7,8,9]) self.assertTrue(f.isEqual(f3_ter,1e-12,1e-12)) ## Use case 3 : no pfl but creation of pfls due to gauss pts @@ -1651,7 +1804,7 @@ class MEDLoaderTest(unittest.TestCase): f.setGaussLocalizationOnCells([11,12],[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8,0.8,0.8],[0.8,0.07,0.1,0.01,0.02]) f.setGaussLocalizationOnCells([13,14,15,17,18],[0.,0.,1.,0.,1.,1.,0.,1.,0.5,0.,1.,0.5,0.5,1.,0.,0.5],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8],[0.8,0.1,0.03,0.07]) f.setGaussLocalizationOnCells([16,19],[0.,0.,1.,0.,1.,1.,0.,1.,0.5,0.,1.,0.5,0.5,1.,0.,0.5],[0.3,0.3,0.7,0.7,0.8,0.8],[0.8,0.1,0.1]) - f.checkCoherency() + f.checkConsistencyLight() mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) f1ts=MEDFileField1TS.New() @@ -1670,12 +1823,12 @@ class MEDLoaderTest(unittest.TestCase): f3=f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) f3.renumberCells([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,17,18,16,19]) self.assertTrue(f.isEqual(f3,1e-12,1e-12)) - f3_bis=MEDLoader.ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + f3_bis=ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_bis.renumberCells([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,17,18,16,19]) self.assertTrue(f.isEqual(f3_bis,1e-12,1e-12)) # - MEDLoader.WriteField(fname2,f,True) - f3_ter=MEDLoader.ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + WriteField(fname2,f,True) + f3_ter=ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_ter.renumberCells([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,17,18,16,19]) self.assertTrue(f.isEqual(f3_ter,1e-12,1e-12)) pass @@ -1696,7 +1849,7 @@ class MEDLoaderTest(unittest.TestCase): m1=MEDCouplingUMesh(m0.getName(),1) m1.allocateCells(9) conn1=[0,1,0,3,3,4,4,1,5,4,2,4,1,2,3,6,5,8] - for i in xrange(9): + for i in range(9): m1.insertNextCell(NORM_SEG2,conn1[2*i:2*i+2]) pass m1.finishInsertingCells() @@ -1729,36 +1882,36 @@ class MEDLoaderTest(unittest.TestCase): ## Reading from file m=MEDFileMesh.New(fname) m0=m.getMeshAtLevel(0) - m00=m0.deepCpy() ; m00=m00[[0,2]] ; m00.setName(m.getName()) ; m00.zipCoords() + m00=m0.deepCopy() ; m00=m00[[0,2]] ; m00.setName(m.getName()) ; m00.zipCoords() fieldNode0.setMesh(m00) f0=MEDFileField1TS.New(fname,fieldNode0.getName(),dt,it) ff0_1=f0.getFieldOnMeshAtLevel(ON_NODES,m0) - ff0_1.checkCoherency() + ff0_1.checkConsistencyLight() self.assertTrue(ff0_1.isEqual(fieldNode0,1e-12,1e-12)) ff0_2=f0.getFieldAtLevel(ON_NODES,0) - ff0_2.checkCoherency() + ff0_2.checkConsistencyLight() self.assertTrue(ff0_2.isEqual(fieldNode0,1e-12,1e-12)) ff0_3=f0.getFieldOnMeshAtLevel(ON_NODES,0,m) - ff0_3.checkCoherency() + ff0_3.checkConsistencyLight() self.assertTrue(ff0_3.isEqual(fieldNode0,1e-12,1e-12)) - ff0_4=MEDLoader.ReadFieldNode(fname,m.getName(),0,fieldNode0.getName(),dt,it) - ff0_4.checkCoherency() + ff0_4=ReadFieldNode(fname,m.getName(),0,fieldNode0.getName(),dt,it) + ff0_4.checkConsistencyLight() self.assertTrue(ff0_4.isEqual(fieldNode0,1e-12,1e-12)) f1=MEDFileField1TS.New(fname,fieldNode1.getName(),dt,it) m1=m.getMeshAtLevel(-1) - m10=m1.deepCpy() ; m10=m10[[0,1,2,3,4,5,6,7]] ; m10.setName(m.getName()) ; m10.zipCoords() + m10=m1.deepCopy() ; m10=m10[[0,1,2,3,4,5,6,7]] ; m10.setName(m.getName()) ; m10.zipCoords() fieldNode1.setMesh(m10) ff1_1=f1.getFieldOnMeshAtLevel(ON_NODES,m1) - ff1_1.checkCoherency() + ff1_1.checkConsistencyLight() self.assertTrue(ff1_1.isEqual(fieldNode1,1e-12,1e-12)) ff1_2=f1.getFieldAtLevel(ON_NODES,-1) - ff1_2.checkCoherency() + ff1_2.checkConsistencyLight() self.assertTrue(ff1_2.isEqual(fieldNode1,1e-12,1e-12)) ff1_3=f1.getFieldOnMeshAtLevel(ON_NODES,-1,m) - ff1_3.checkCoherency() + ff1_3.checkConsistencyLight() self.assertTrue(ff1_3.isEqual(fieldNode1,1e-12,1e-12)) - ff1_4=MEDLoader.ReadFieldNode(fname,m.getName(),-1,fieldNode1.getName(),dt,it) - ff1_4.checkCoherency() + ff1_4=ReadFieldNode(fname,m.getName(),-1,fieldNode1.getName(),dt,it) + ff1_4.checkConsistencyLight() self.assertTrue(ff1_4.getMesh().isEqual(m10,1e-12)) self.assertRaises(InterpKernelException,f1.getFieldOnMeshAtLevel,ON_NODES,m0) # error because impossible to build a sub mesh at level 0 lying on nodes [0,1,2,3,4,5,6] self.assertRaises(InterpKernelException,f1.getFieldAtLevel,ON_NODES,0) # error because impossible to build a sub mesh at level 0 lying on nodes [0,1,2,3,4,5,6] @@ -1786,7 +1939,7 @@ class MEDLoaderTest(unittest.TestCase): m1=MEDCouplingUMesh(m0.getName(),1) m1.allocateCells(9) conn1=[0,1,0,3,3,4,4,1,5,4,2,4,1,2,3,6,5,8] - for i in xrange(9): + for i in range(9): m1.insertNextCell(NORM_SEG2,conn1[2*i:2*i+2]) pass m1.finishInsertingCells() @@ -1819,36 +1972,36 @@ class MEDLoaderTest(unittest.TestCase): ## Reading from file m=MEDFileMesh.New(fname) m0=m.getMeshAtLevel(0) - m00=m0.deepCpy() ; m00=m00[pfl0] ; m00.setName(m.getName()) + m00=m0.deepCopy() ; m00=m00[pfl0] ; m00.setName(m.getName()) fieldCell0.setMesh(m00) f0=MEDFileField1TS.New(fname,fieldCell0.getName(),dt,it) ff0_1=f0.getFieldOnMeshAtLevel(ON_CELLS,m0) - ff0_1.checkCoherency() + ff0_1.checkConsistencyLight() self.assertTrue(ff0_1.isEqual(fieldCell0,1e-12,1e-12)) ff0_2=f0.getFieldAtLevel(ON_CELLS,0) - ff0_2.checkCoherency() + ff0_2.checkConsistencyLight() self.assertTrue(ff0_2.isEqual(fieldCell0,1e-12,1e-12)) ff0_3=f0.getFieldOnMeshAtLevel(ON_CELLS,0,m) - ff0_3.checkCoherency() + ff0_3.checkConsistencyLight() self.assertTrue(ff0_3.isEqual(fieldCell0,1e-12,1e-12)) - ff0_4=MEDLoader.ReadFieldCell(fname,m.getName(),0,fieldCell0.getName(),dt,it) - ff0_4.checkCoherency() + ff0_4=ReadFieldCell(fname,m.getName(),0,fieldCell0.getName(),dt,it) + ff0_4.checkConsistencyLight() self.assertTrue(ff0_4.isEqual(fieldCell0,1e-12,1e-12)) f1=MEDFileField1TS.New(fname,fieldCell1.getName(),dt,it) m1=m.getMeshAtLevel(-1) - m10=m1.deepCpy() ; m10=m10[pfl1] ; m10.setName(m.getName()) + m10=m1.deepCopy() ; m10=m10[pfl1] ; m10.setName(m.getName()) fieldCell1.setMesh(m10) ff1_1=f1.getFieldOnMeshAtLevel(ON_CELLS,m1) - ff1_1.checkCoherency() + ff1_1.checkConsistencyLight() self.assertTrue(ff1_1.isEqual(fieldCell1,1e-12,1e-12)) ff1_2=f1.getFieldAtLevel(ON_CELLS,-1) - ff1_2.checkCoherency() + ff1_2.checkConsistencyLight() self.assertTrue(ff1_2.isEqual(fieldCell1,1e-12,1e-12)) ff1_3=f1.getFieldOnMeshAtLevel(ON_CELLS,-1,m) - ff1_3.checkCoherency() + ff1_3.checkConsistencyLight() self.assertTrue(ff1_3.isEqual(fieldCell1,1e-12,1e-12)) - ff1_4=MEDLoader.ReadFieldCell(fname,m.getName(),-1,fieldCell1.getName(),dt,it) - ff1_4.checkCoherency() + ff1_4=ReadFieldCell(fname,m.getName(),-1,fieldCell1.getName(),dt,it) + ff1_4.checkConsistencyLight() self.assertTrue(ff1_4.getMesh().isEqual(m10,1e-12)) self.assertRaises(InterpKernelException,f1.getFieldOnMeshAtLevel,ON_CELLS,m0) # error because impossible to build a sub mesh at level 0 lying on cells [0,1,2,3,4,5,6] self.assertRaises(InterpKernelException,f1.getFieldAtLevel,ON_CELLS,0) # error because impossible to build a sub mesh at level 0 lying on cells [0,1,2,3,4,5,6] @@ -1897,7 +2050,7 @@ class MEDLoaderTest(unittest.TestCase): m1.setCoords(coo) ; m.setMeshAtLevel(-1,m1) m2.setCoords(coo) ; m.setMeshAtLevel(-2,m2) # - mm=m.deepCpy() + mm=m.deepCopy() famCoo=DataArrayInt([0,2,0,3,2,0,-1,0,0,0,0,-1,3]) ; mm.setFamilyFieldArr(1,famCoo) da0=DataArrayInt([0,0,0]) ; mm.setFamilyFieldArr(0,da0) da1=DataArrayInt([0,3]) ; mm.setFamilyFieldArr(-1,da1) @@ -1908,8 +2061,16 @@ class MEDLoaderTest(unittest.TestCase): mm.setFamiliesOnGroup("grp0",["MyOtherFam"]) mm.setFamiliesOnGroup("grpA",["MyOther-1"]) # + self.assertTrue(mm.getNodeFamiliesArr(["MyFam","MyOtherFam"]).isEqual(DataArrayInt([1,3,4,12]))) # find family id 2 and 3 into famCoo + # daTest=DataArrayInt([1,3,4,6,9,10,12]) ; daTest.setName("grp1") mm.addNodeGroup(daTest) + self.assertTrue(mm.getNodeGroupArr(daTest.getName()).isEqual(daTest)) # the node group has been pushed right before -> now read it + self.assertTrue(mm.getNodeGroupsArr(["grp1","grpA"]).isEqual(DataArrayInt([1,3,4,6,9,10,11,12])))#daTest+[11] because 11 is the rank of -1 (MyOther-1) in famCoo + # + expect1=DataArrayInt([1,4]) ; expect1.setName("MyFam") + self.assertTrue(mm.getNodeFamilyArr(expect1.getName()).isEqual(expect1)) + # self.assertTrue(mm.getGroupArr(1,daTest.getName()).isEqual(daTest)) self.assertTrue(mm.getFamilyFieldAtLevel(1).isEqual(DataArrayInt([6,2,6,8,2,6,5,6,6,7,7,4,8]))) for lev,arr in [(0,da0),(-1,da1),(-2,da2)]: @@ -1953,13 +2114,13 @@ class MEDLoaderTest(unittest.TestCase): m=MEDFileUMesh() coo=DataArrayDouble(9) ; coo.iota(1.) ; coo.rearrange(3) ; coo.setInfoOnComponents(["aaa [b]","cc [dd]", "e [fff]"]) m0=MEDCouplingUMesh("toto",2) ; m0.allocateCells(0) - for i in xrange(7): + for i in range(7): m0.insertNextCell(NORM_TRI3,[1,2,1]) pass - for i in xrange(4): + for i in range(4): m0.insertNextCell(NORM_QUAD4,[1,1,2,0]) pass - for i in xrange(2): + for i in range(2): m0.insertNextCell(NORM_POLYGON,[0,0,1,1,2,2]) pass m1=MEDCouplingUMesh("toto",1) ; m1.allocateCells(0) ; m1.insertNextCell(NORM_SEG2,[1,6]) ; m1.insertNextCell(NORM_SEG2,[7,3]) @@ -1968,7 +2129,7 @@ class MEDLoaderTest(unittest.TestCase): m1.setCoords(coo) ; m.setMeshAtLevel(-1,m1) m2.setCoords(coo) ; m.setMeshAtLevel(-2,m2) # - mm=m.deepCpy() + mm=m.deepCopy() famCoo=DataArrayInt([0,2,0,3,2,0,-1,0,0,0,0,-1,3]) ; mm.setFamilyFieldArr(0,famCoo) da0=DataArrayInt([0,0,0]) ; mm.setFamilyFieldArr(1,da0) da1=DataArrayInt([0,3]) ; mm.setFamilyFieldArr(-1,da1) @@ -2029,31 +2190,31 @@ class MEDLoaderTest(unittest.TestCase): m.setCoords(arr,arr) m=m.buildUnstructured() m.setName("mm") - f=m.getMeasureField(ON_CELLS) - self.assertIn(m.getHeapMemorySize(),xrange(3552-100,3552+100+4*strMulFac)) - self.assertIn(f.getHeapMemorySize(),xrange(4215-100,4215+100+8*strMulFac)) + f=m.getMeasureField(False) + self.assertIn(m.getHeapMemorySize(), list(range(3552 - 100, 3552 + 100 + 4 * strMulFac))) + self.assertIn(f.getHeapMemorySize(), list(range(4215 - 100, 4215 + 100 + 8 * strMulFac))) # mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) - self.assertIn(mm.getHeapMemorySize(),xrange(3889-100,3889+100+10*strMulFac)) + self.assertIn(mm.getHeapMemorySize(), list(range(3889 - 100, 4225 + 100 + 10 * strMulFac))) ff=MEDFileField1TS() ff.setFieldNoProfileSBT(f) - self.assertIn(ff.getHeapMemorySize(),xrange(771-40,771+21+(4+1)*strMulFac)) + self.assertIn(ff.getHeapMemorySize(), list(range(771 - 40, 871 + 21 + (4 + 1) * strMulFac))) # fff=MEDFileFieldMultiTS() fff.appendFieldNoProfileSBT(f) - self.assertIn(fff.getHeapMemorySize(),xrange(815-50,815+30+(6+2)*strMulFac)) + self.assertIn(fff.getHeapMemorySize(), list(range(815 - 50, 915 + 30 + (6 + 2) * strMulFac))) f.setTime(1.,0,-1) fff.appendFieldNoProfileSBT(f) - self.assertIn(fff.getHeapMemorySize(),xrange(1594-90,1594+50+(10+1)*strMulFac)) - self.assertIn(fff[0,-1].getHeapMemorySize(),xrange(771-40,771+20+(4+1)*strMulFac)) + self.assertIn(fff.getHeapMemorySize(), list(range(1594 - 90, 1794 + 50 + (10 + 1) * strMulFac))) + self.assertIn(fff[0, -1].getHeapMemorySize(), list(range(771 - 40, 871 + 20 + (4 + 1) * strMulFac))) f2=f[:50] f2.setTime(2.,1,-1) pfl=DataArrayInt.Range(0,50,1) ; pfl.setName("pfl") fff.appendFieldProfile(f2,mm,0,pfl) - self.assertIn(fff.getHeapMemorySize(),xrange(2348-130,2348+100+(10+2)*strMulFac)) - self.assertIn(fff.getProfile("pfl").getHeapMemorySize(),xrange(204-10,204+10+2*strMulFac)) - self.assertIn(fff[1,-1].getHeapMemorySize(),xrange(738-50,738+30+4*strMulFac)) + self.assertIn(fff.getHeapMemorySize(), list(range(2348 - 130, 2608 + 100 + (10 + 2) * strMulFac))) + self.assertIn(fff.getProfile("pfl").getHeapMemorySize(), list(range(204 - 10, 204 + 10 + 2 * strMulFac))) + self.assertIn(fff[1, -1].getHeapMemorySize(), list(range(738 - 50, 838 + 30 + 4 * strMulFac))) pass def testCurveLinearMesh1(self): @@ -2067,7 +2228,7 @@ class MEDLoaderTest(unittest.TestCase): a1.iota(7.) ; a1.rearrange(3); mesh.setCoords(a1); mesh.setNodeGridStructure([4,5]); - mesh.checkCoherency(); + mesh.checkConsistencyLight(); # m=MEDFileCurveLinearMesh() m.setMesh(mesh) @@ -2108,15 +2269,15 @@ class MEDLoaderTest(unittest.TestCase): pts.setName("A") ; pts.setDescription("An example of parameter") ; pts.setTimeUnit("ms") pts.appendValue(1,2,3.4,567.89) pts.appendValue(2,3,5.6,999.123) - pts2=pts.deepCpy() ; pts2.setName("B") ; pts2.setDescription("A second example") + pts2=pts.deepCopy() ; pts2.setName("B") ; pts2.setDescription("A second example") p.pushParam(pts) ; p.pushParam(pts2) data.write(fname,2) p2=MEDFileParameters(fname) self.assertTrue(p.isEqual(p2,1e-14)[0]) self.assertAlmostEqual(p[1][1,2].getValue(),567.89,13) - p3=p.deepCpy() - pts4=pts2.deepCpy() - pts3=pts2.deepCpy() + p3=p.deepCopy() + pts4=pts2.deepCopy() + pts3=pts2.deepCopy() self.assertTrue(pts3.isEqual(pts2,1e-14)[0]) pts2.eraseTimeStepIds([0]) self.assertTrue(not pts3.isEqual(pts2,1e-14)[0]) @@ -2161,26 +2322,26 @@ class MEDLoaderTest(unittest.TestCase): mm.setMeshAtLevel(0,m) mm.setMeshAtLevel(-1,m1) namesCellL0=DataArrayAsciiChar(6,16) - namesCellL0[:]=["CellL0#%.3d "%(i) for i in xrange(6)] + namesCellL0[:] = ["CellL0#%.3d " % (i) for i in range(6)] mm.setNameFieldAtLevel(0,namesCellL0) - namesCellL1=DataArrayAsciiChar.Aggregate([namesCellL0,namesCellL0,namesCellL0.substr(2)]) - namesCellL1[:]=["CellLM1#%.3d "%(i) for i in xrange(16)] + namesCellL1=DataArrayAsciiChar.Aggregate([namesCellL0,namesCellL0,namesCellL0.subArray(2)]) + namesCellL1[:] = ["CellLM1#%.3d " % (i) for i in range(16)] mm.setNameFieldAtLevel(-1,namesCellL1) - namesNodes=namesCellL1.substr(4,16) - namesNodes[:]=["Node#%.3d "%(i) for i in xrange(12)] + namesNodes=namesCellL1.subArray(4,16) + namesNodes[:] = ["Node#%.3d " % (i) for i in range(12)] mm.setNameFieldAtLevel(1,namesNodes) mm.write(fname,2) # mmr=MEDFileMesh.New(fname) - self.assertTrue(mm.getNameFieldAtLevel(0).isEqual(DataArrayAsciiChar(["CellL0#%.3d "%(i) for i in xrange(6)]))) - self.assertTrue(mm.getNameFieldAtLevel(-1).isEqual(DataArrayAsciiChar(["CellLM1#%.3d "%(i) for i in xrange(16)]))) - self.assertTrue(mm.getNameFieldAtLevel(1).isEqual(DataArrayAsciiChar(["Node#%.3d "%(i) for i in xrange(12)]))) + self.assertTrue(mm.getNameFieldAtLevel(0).isEqual(DataArrayAsciiChar(["CellL0#%.3d " % (i) for i in range(6)]))) + self.assertTrue(mm.getNameFieldAtLevel(-1).isEqual(DataArrayAsciiChar(["CellLM1#%.3d " % (i) for i in range(16)]))) + self.assertTrue(mm.getNameFieldAtLevel(1).isEqual(DataArrayAsciiChar(["Node#%.3d " % (i) for i in range(12)]))) self.assertTrue(mm.isEqual(mmr,1e-12)[0]) mmr.getNameFieldAtLevel(1).setIJ(0,0,'M') self.assertTrue(not mm.isEqual(mmr,1e-12)[0]) mmr.getNameFieldAtLevel(1).setIJ(0,0,'N') self.assertTrue(mm.isEqual(mmr,1e-12)[0]) - mmCpy=mm.deepCpy() + mmCpy=mm.deepCopy() self.assertTrue(mm.isEqual(mmCpy,1e-12)[0]) # remove names on nodes mmCpy.setNameFieldAtLevel(1,None) @@ -2191,7 +2352,7 @@ class MEDLoaderTest(unittest.TestCase): mm.write(fname,2) mmr=MEDFileMesh.New(fname) self.assertEqual(mmr.getNameFieldAtLevel(1),None) - self.assertTrue(mmr.getNameFieldAtLevel(0).isEqual(DataArrayAsciiChar(["CellL0#%.3d "%(i) for i in xrange(6)]))) + self.assertTrue(mmr.getNameFieldAtLevel(0).isEqual(DataArrayAsciiChar(["CellL0#%.3d " % (i) for i in range(6)]))) self.assertEqual(mmr.getNameFieldAtLevel(-1),None) # c=MEDCouplingCMesh() @@ -2200,18 +2361,18 @@ class MEDLoaderTest(unittest.TestCase): c.setName("cmesh") cc=MEDFileCMesh() cc.setMesh(c) - cc.setNameFieldAtLevel(0,DataArrayAsciiChar(["Cell#%.3d "%(i) for i in xrange(4)])) - cc.setNameFieldAtLevel(1,DataArrayAsciiChar(["Node#%.3d "%(i) for i in xrange(9)])) + cc.setNameFieldAtLevel(0, DataArrayAsciiChar(["Cell#%.3d " % (i) for i in range(4)])) + cc.setNameFieldAtLevel(1, DataArrayAsciiChar(["Node#%.3d " % (i) for i in range(9)])) cc.write(fname2,2) ccr=MEDFileMesh.New(fname2) - self.assertTrue(ccr.getNameFieldAtLevel(0).isEqual(DataArrayAsciiChar(["Cell#%.3d "%(i) for i in xrange(4)]))) - self.assertTrue(ccr.getNameFieldAtLevel(1).isEqual(DataArrayAsciiChar(["Node#%.3d "%(i) for i in xrange(9)]))) + self.assertTrue(ccr.getNameFieldAtLevel(0).isEqual(DataArrayAsciiChar(["Cell#%.3d " % (i) for i in range(4)]))) + self.assertTrue(ccr.getNameFieldAtLevel(1).isEqual(DataArrayAsciiChar(["Node#%.3d " % (i) for i in range(9)]))) self.assertTrue(cc.isEqual(ccr,1e-12)[0]) ccr.getNameFieldAtLevel(1).setIJ(0,0,'M') self.assertTrue(not cc.isEqual(ccr,1e-12)[0]) ccr.getNameFieldAtLevel(1).setIJ(0,0,'N') self.assertTrue(cc.isEqual(ccr,1e-12)[0]) - ccCpy=cc.deepCpy() + ccCpy=cc.deepCopy() self.assertTrue(cc.isEqual(ccCpy,1e-12)[0]) pass @@ -2247,7 +2408,7 @@ class MEDLoaderTest(unittest.TestCase): c2.transformWithIndArr(whichGrp) splitOfM1=len(grps)*[None] for grpId,grp in enumerate(grps): - tmp=c2.getIdsEqual(grpId) + tmp=c2.findIdsEqual(grpId) splitOfM1[grpId]=tmp pass splitOfM1[0].isEqual(DataArrayInt([0,1,2,3,6,8,10,11,12,13])) @@ -2432,11 +2593,11 @@ class MEDLoaderTest(unittest.TestCase): m.setFamilyFieldArr(-2,f0) m.setFamilyFieldArr(1,p) nbOfFams=len(fns) - for i in xrange(nbOfFams): + for i in range(nbOfFams): m.addFamily(fns[i],fids[i]) pass nbOfGrps=len(grpns) - for i in xrange(nbOfGrps): + for i in range(nbOfGrps): m.setFamiliesIdsOnGroup(grpns[i],famIdsPerGrp[i]) pass m.setName(m2.getName()) @@ -2445,7 +2606,7 @@ class MEDLoaderTest(unittest.TestCase): # mm0=MEDFileMesh.New(fileName) mm1=MEDFileMesh.New(fileName) - groupNamesIni=MEDLoader.GetMeshGroupsNames(fileName,"ma") + groupNamesIni=GetMeshGroupsNames(fileName,"ma") for name in groupNamesIni: mm1.changeGroupName(name,name+'N') pass @@ -2466,8 +2627,7 @@ class MEDLoaderTest(unittest.TestCase): def testInt32InMEDFileFieldStar1(self): fname="Pyfile63.med" f1=MEDLoaderDataForTest.buildVecFieldOnCells_1(); - arr=f1.getArray().convertToIntArr() - f1.setArray(None) + f1=f1.convertToIntField() m1=f1.getMesh() mm1=MEDFileUMesh.New() mm1.setCoords(m1.getCoords()) @@ -2475,63 +2635,62 @@ class MEDLoaderTest(unittest.TestCase): mm1.setName(m1.getName()) mm1.write(fname,2) ff1=MEDFileIntField1TS() - ff1.setFieldNoProfileSBT(f1,arr) - a,b=ff1.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertEqual(b.getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) - self.assertTrue(b.isEqual(arr)) - self.assertTrue(a.isEqual(f1,1e-12,1e-12)) + ff1.setFieldNoProfileSBT(f1) + a=ff1.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) + self.assertEqual(a.getArray().getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) + self.assertTrue(a.isEqual(f1,1e-12,0)) ff1.write(fname,0) + a,b=ff1.getUndergroundDataArrayExt() + self.assertEqual(a.getHiddenCppPointer(),ff1.getUndergroundDataArray().getHiddenCppPointer()) + self.assertEqual(b,[((3,0),(0,2)),((4,0),(2,4)),((6,0),(4,5)),((5,0),(5,6))]) ff2=MEDFileAnyTypeField1TS.New(fname) self.assertEqual(ff2.getName(),"VectorFieldOnCells") self.assertEqual(ff2.getTime(),[0,1,2.0]) self.assertTrue(isinstance(ff2,MEDFileIntField1TS)) - a,b=ff1.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertEqual(b.getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) - self.assertTrue(b.isEqual(arr)) - self.assertTrue(a.isEqual(f1,1e-12,1e-12)) + a=ff1.getFieldOnMeshAtLevel(ON_CELLS,0,mm1) + self.assertEqual(a.getArray().getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) + self.assertTrue(a.isEqual(f1,1e-12,0)) ff2.setTime(1,2,3.) c=ff2.getUndergroundDataArray() ; c*=2 - ff2.write(fname,0) # 2 time steps in + ff2.write(fname,0) # 2 time steps in ffs1=MEDFileAnyTypeFieldMultiTS.New(fname,"VectorFieldOnCells") self.assertEqual(ffs1.getTimeSteps(),[(0, 1, 2.0), (1, 2, 3.0)]) self.assertEqual(len(ffs1),2) self.assertTrue(isinstance(ffs1,MEDFileIntFieldMultiTS)) - a,b=ffs1[2.].getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertTrue(b.isEqual(arr)) - self.assertTrue(a.isEqual(f1,1e-12,1e-12)) - a,b=ffs1[2.].getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertTrue(b.isEqual(arr)) - self.assertTrue(a.isEqual(f1,1e-12,1e-12)) + a=ffs1[2.].getFieldOnMeshAtLevel(ON_CELLS,0,mm1) + self.assertTrue(a.isEqual(f1,1e-12,0)) + a=ffs1.getFieldOnMeshAtLevel(ON_CELLS,0,1,0,mm1) + self.assertTrue(a.isEqual(f1,1e-12,0)) it=ffs1.__iter__() ; it.next() ; ff2bis=it.next() - a,b=ff2bis.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertTrue(b.isEqual(2*arr)) - f1.setTime(3.,1,2) - self.assertTrue(a.isEqual(f1,1e-12,1e-12)) + a=ff2bis.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) + self.assertTrue(a.getArray().isEqual(2*f1.getArray())) + f1.setTime(3.,1,2) ; f1.getArray()[:]*=2 + self.assertTrue(a.isEqual(f1,1e-12,0)) ; f1.getArray()[:]/=2 bc=DataArrayInt(6,3) ; bc[:]=0 ; bc.setInfoOnComponents(['power [MW/m^3]','density [g/cm^3]','temperature [K]']) for it in ffs1: - a,b=it.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - bc+=b + a=it.getFieldOnMeshAtLevel(ON_CELLS,0,mm1) + bc+=a.getArray() pass - self.assertTrue(bc.isEqual(3*arr)) - nf1=MEDCouplingFieldDouble(ON_NODES) + self.assertTrue(bc.isEqual(3*f1.getArray())) + nf1=MEDCouplingFieldInt(ON_NODES) nf1.setTime(9.,10,-1) nf1.setMesh(f1.getMesh()) - narr=DataArrayInt(12,2) ; narr.setInfoOnComponents(["aa [u1]","bbbvv [ppp]"]) ; narr[:,0]=range(12) ; narr[:,1]=2*narr[:,0] - nf1.setName("VectorFieldOnNodes") + narr=DataArrayInt(12,2) ; narr.setInfoOnComponents(["aa [u1]","bbbvv [ppp]"]) ; narr[:,0]=list(range(12)) ; narr[:,1]=2*narr[:,0] + nf1.setName("VectorFieldOnNodes") ; nf1.setArray(narr) nff1=MEDFileIntField1TS.New() - nff1.setFieldNoProfileSBT(nf1,narr) + nff1.setFieldNoProfileSBT(nf1) self.assertEqual(nff1.getInfo(),('aa [u1]','bbbvv [ppp]')) self.assertEqual(nff1.getTime(),[10,-1,9.0]) nff1.write(fname,0) # - nf2=MEDCouplingFieldDouble(ON_NODES) + nf2=MEDCouplingFieldInt(ON_NODES) nf2.setTime(19.,20,-11) nf2.setMesh(f1.getMesh()) - narr2=DataArrayInt(8,2) ; narr.setInfoOnComponents(["aapfl [u1]","bbbvvpfl [ppp]"]) ; narr2[:,0]=range(8) ; narr2[:,0]+=10 ; narr2[:,1]=3*narr2[:,0] - nf2.setName("VectorFieldOnNodesPfl") ; narr2.setName(nf2.getName()) + narr2=DataArrayInt(8,2) ; narr.setInfoOnComponents(["aapfl [u1]","bbbvvpfl [ppp]"]) ; narr2[:,0]=list(range(8)) ; narr2[:,0]+=10 ; narr2[:,1]=3*narr2[:,0] + nf2.setName("VectorFieldOnNodesPfl") ; narr2.setName(nf2.getName()) ; nf2.setArray(narr2) nff2=MEDFileIntField1TS.New() npfl=DataArrayInt([1,2,4,5,6,7,10,11]) ; npfl.setName("npfl") - nff2.setFieldProfile(nf2,narr2,mm1,0,npfl) + nff2.setFieldProfile(nf2,mm1,0,npfl) nff2.getFieldWithProfile(ON_NODES,0,mm1) a,b=nff2.getFieldWithProfile(ON_NODES,0,mm1) ; b.setName(npfl.getName()) self.assertTrue(b.isEqual(npfl)) @@ -2558,8 +2717,8 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(isinstance(ffs[2],MEDFileFieldMultiTS)) self.assertTrue(isinstance(ffs[3],MEDFileIntFieldMultiTS)) # - self.assertTrue(fs["VectorFieldOnCells"][0].getUndergroundDataArray().isEqualWithoutConsideringStr(arr)) - self.assertTrue(fs["VectorFieldOnCells"][1,2].getUndergroundDataArray().isEqualWithoutConsideringStr(2*arr)) + self.assertTrue(fs["VectorFieldOnCells"][0].getUndergroundDataArray().isEqualWithoutConsideringStr(f1.getArray())) + self.assertTrue(fs["VectorFieldOnCells"][1,2].getUndergroundDataArray().isEqualWithoutConsideringStr(2*f1.getArray())) self.assertTrue(fs["VectorFieldOnNodesPfl"][0].getUndergroundDataArray().isEqualWithoutConsideringStr(narr2)) self.assertTrue(fs["VectorFieldOnNodes"][9.].getUndergroundDataArray().isEqualWithoutConsideringStr(narr)) self.assertTrue(fs["VectorFieldOnNodesDouble"][29.].getUndergroundDataArray().isEqualWithoutConsideringStr(f1.getMesh().getCoords(),1e-12)) @@ -2586,7 +2745,7 @@ class MEDLoaderTest(unittest.TestCase): c=DataArrayDouble(12) ; c.iota(); m=MEDCouplingCMesh() ; m.setCoordsAt(0,c) ; m.setName("mesh") mm=MEDFileCMesh() ; mm.setMesh(m) ; mm.write(fname,2) f1.setMesh(m) - arr=DataArrayDouble(12,2) ; arr.setInfoOnComponents(["aa [u1]","bbbvv [ppp]"]) ; arr[:,0]=range(12) ; arr[:,1]=2*arr[:,0] + arr=DataArrayDouble(12,2) ; arr.setInfoOnComponents(["aa [u1]","bbbvv [ppp]"]) ; arr[:,0]=list(range(12)) ; arr[:,1]=2*arr[:,0] f1.setArray(arr) f1.setName("Field1") ff1=MEDFileField1TS.New() @@ -2620,13 +2779,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris = [tri.deepCopy() for i in range(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads = [quad.deepCopy() for i in range(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2635,7 +2794,7 @@ class MEDLoaderTest(unittest.TestCase): fmts0_0=MEDFileFieldMultiTS() fmts0_1=MEDFileFieldMultiTS() # time steps - for i in xrange(10): + for i in range(10): infos1=["aa [bb]","ccc [ddd]"] ; name1="1stField" d=DataArrayDouble(18) ; d.iota(i*10) ; d.rearrange(2) ; d.setInfoOnComponents(infos1) f=MEDCouplingFieldDouble(ON_CELLS) ; f.setName(name1) ; f.setArray(d) ; f.setMesh(m) @@ -2655,9 +2814,9 @@ class MEDLoaderTest(unittest.TestCase): pass # add a mismatch of nb of compos pass - fmts0_2=fmts0_0.deepCpy() - fmts0_3=fmts0_0.deepCpy() - fmts0_4=fmts0_0.deepCpy() + fmts0_2=fmts0_0.deepCopy() + fmts0_3=fmts0_0.deepCopy() + fmts0_4=fmts0_0.deepCopy() fmts0_5=fmts0_0.shallowCpy() self.assertTrue(len(fmts0_0)==10 and len(fmts0_1)==10 and len(fmts0_2)==10 and len(fmts0_3)==10 and len(fmts0_4)==10 and len(fmts0_5)==10) del fmts0_2[::2] @@ -2698,13 +2857,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris = [tri.deepCopy() for i in range(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads = [quad.deepCopy() for i in range(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2717,7 +2876,7 @@ class MEDLoaderTest(unittest.TestCase): fmts0_0=MEDFileFieldMultiTS() fmts0_1=MEDFileFieldMultiTS() # time steps - for i in xrange(10): + for i in range(10): infos1=["aa [bb]","ccc [ddd]"] ; name1="1stField" d=DataArrayDouble(14) ; d.iota(i*10) ; d.rearrange(2) ; d.setInfoOnComponents(infos1) f=MEDCouplingFieldDouble(ON_CELLS) ; f.setName(name1) ; f.setArray(d) ; f.setMesh(m) @@ -2733,9 +2892,9 @@ class MEDLoaderTest(unittest.TestCase): fmts0_0.zipPflsNames() self.assertEqual(fmts0_0.getPfls(),('pfl_NORM_QUAD4',)) self.assertTrue(fmts0_1.getProfile("pfl_NORM_QUAD4").isEqual(fmts0_0.getProfile("pfl_NORM_QUAD4"))) - fmts0_2=fmts0_0.deepCpy() - fmts0_3=fmts0_0.deepCpy() - fmts0_4=fmts0_0.deepCpy() + fmts0_2=fmts0_0.deepCopy() + fmts0_3=fmts0_0.deepCopy() + fmts0_4=fmts0_0.deepCopy() fs0=MEDFileFields() fs0.pushField(fmts0_0) fmts0_2.setName("2ndField") ; fs0.pushField(fmts0_2) @@ -2744,7 +2903,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(fs0.getPfls(),('pfl_NORM_QUAD4',)) # fmts0_5=MEDFileFieldMultiTS() - for i in xrange(7): + for i in range(7): infos1=["aa [bb]","ccc [ddd]"] ; name1="1stField" d=DataArrayDouble(16) ; d.iota(i*10) ; d.rearrange(2) ; d.setInfoOnComponents(infos1) f=MEDCouplingFieldDouble(ON_CELLS) ; f.setName(name1) ; f.setArray(d) ; f.setMesh(m) @@ -2763,13 +2922,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris = [tri.deepCopy() for i in range(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads = [quad.deepCopy() for i in range(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2783,7 +2942,7 @@ class MEDLoaderTest(unittest.TestCase): fmts0_1=MEDFileFieldMultiTS() # time steps infos1=['aa [bb]','ccc [ddd]',"ZZZZ [MW*s]"] - for i in xrange(10): + for i in range(10): name1="1stField" d=DataArrayDouble(21) ; d.iota(i*10) ; d.rearrange(3) ; d.setInfoOnComponents(infos1) f=MEDCouplingFieldDouble(ON_CELLS) ; f.setName(name1) ; f.setArray(d) ; f.setMesh(m) @@ -2812,7 +2971,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(fs1.getPfls(),('pfl_NORM_QUAD4',)) self.assertEqual(fs1.getPflsReallyUsed(),('pfl_NORM_QUAD4',)) self.assertEqual(4,len(fs1)) - for i in xrange(10): + for i in range(10): for j,fieldName in enumerate(['1stField_aa','1stField_ccc','1stField_ZZZZ']): f1ts=fs1[fieldName][i] f=f1ts.getFieldOnMeshAtLevel(ON_CELLS,0,mm) @@ -2832,13 +2991,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris = [tri.deepCopy() for i in range(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads = [quad.deepCopy() for i in range(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2847,7 +3006,7 @@ class MEDLoaderTest(unittest.TestCase): # ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m) ; arr=DataArrayDouble(m.getNumberOfCells()*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCell") - f0.checkCoherency() + f0.checkConsistencyLight() ff0.setFieldNoProfileSBT(f0) # fspExp=[(3,[(0,(0,4),'','')]),(4,[(0,(4,9),'','')])] @@ -2864,7 +3023,7 @@ class MEDLoaderTest(unittest.TestCase): del arr,f0,ff0,ff1,ff0i,fspExp ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["XX [pm]","YYY [hm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellPfl") - f0.checkCoherency() + f0.checkConsistencyLight() pfl=DataArrayInt.Range(0,7,1) ; pfl.setName("pfl") ff0.setFieldProfile(f0,mm,0,pfl) fspExp=[(3,[(0,(0,4),'','')]),(4,[(0,(4,7),'pfl_NORM_QUAD4','')])] @@ -2882,13 +3041,13 @@ class MEDLoaderTest(unittest.TestCase): ## MultiTimeSteps ff0=MEDFileFieldMultiTS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellMTime") ; f0.setTime(0.1,0,10) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldProfile(f0,mm,0,pfl) f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota(100) ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellMTime") ; f0.setTime(1.1,1,11) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldProfile(f0,mm,0,pfl) f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota(200) ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellMTime") ; f0.setTime(2.1,2,12) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldProfile(f0,mm,0,pfl) ff1=ff0.convertToInt() self.assertTrue(isinstance(ff1,MEDFileIntFieldMultiTS)) @@ -2934,13 +3093,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(30)] + tris = [tri.deepCopy() for i in range(30)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(40)] + quads = [quad.deepCopy() for i in range(40)] for i,elt in enumerate(quads): elt.translate([40+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2949,7 +3108,7 @@ class MEDLoaderTest(unittest.TestCase): # ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m) ; arr=DataArrayDouble(m.getNumberOfCells()*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCell") - f0.checkCoherency() + f0.checkConsistencyLight() ff0.setFieldNoProfileSBT(f0) ff0.write(fname,0) # @@ -2958,7 +3117,7 @@ class MEDLoaderTest(unittest.TestCase): # With profiles ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:50]) ; arr=DataArrayDouble(50*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["XX [pm]","YYY [hm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellPfl") - f0.checkCoherency() + f0.checkConsistencyLight() pfl=DataArrayInt.Range(0,50,1) ; pfl.setName("pfl") ff0.setFieldProfile(f0,mm,0,pfl) fspExp=[(3,[(0,(0,30),'','')]),(4,[(0,(30,50),'pfl_NORM_QUAD4','')])] @@ -2970,7 +3129,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(not ff0.getUndergroundDataArray().isAllocated()) self.assertEqual(ff0.getUndergroundDataArray().getInfoOnComponents(),['X [km]','YY [mm]']) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(182,298+2*strMulFac)) + self.assertIn(heap_memory_ref, list(range(182, 540 + 2 * strMulFac))) ff0.loadArrays() ## arr=DataArrayDouble(140) ; arr.iota() ; arr.rearrange(2) self.assertTrue(ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) @@ -2979,7 +3138,7 @@ class MEDLoaderTest(unittest.TestCase): ff0=MEDFileField1TS(fname,"FieldCellPfl",False) self.assertEqual(ff0.getUndergroundDataArray().getInfoOnComponents(),["XX [pm]","YYY [hm]"]) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(350,415+6*strMulFac)) + self.assertIn(heap_memory_ref, list(range(350, 600 + 6 * strMulFac))) ff0.loadArrays() ## arr=DataArrayDouble(100) ; arr.iota() ; arr.rearrange(2) self.assertTrue(ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) @@ -2997,7 +3156,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(ff0.getUndergroundDataArray().getIJ(30,1),5.5) self.assertTrue(not ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(1100,1215+2*strMulFac)) + self.assertIn(heap_memory_ref, list(range(1100, 1400 + 2 * strMulFac))) ff0.unloadArrays() hmd=ff0.getHeapMemorySize()-heap_memory_ref self.assertEqual(hmd,-800) # -50*8*2 @@ -3006,31 +3165,31 @@ class MEDLoaderTest(unittest.TestCase): # ff0=MEDFileField1TS(fname,"FieldCellPfl",-1,-1,False) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(299,415+6*strMulFac)) + self.assertIn(heap_memory_ref, list(range(299, 620 + 6 * strMulFac))) ff0.loadArrays() ## self.assertTrue(ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) self.assertEqual(ff0.getHeapMemorySize()-heap_memory_ref,50*8*2) # fieldName="FieldCellMultiTS" ff0=MEDFileFieldMultiTS() - for t in xrange(20): + for t in range(20): f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m) ; arr=DataArrayDouble(m.getNumberOfCells()*2) ; arr.iota(float(t+1000)) ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName(fieldName) f0.setTime(float(t)+0.1,t,100+t) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldNoProfileSBT(f0) pass ff0.write(fname,0) # ff0=MEDFileAnyTypeFieldMultiTS.New(fname,fieldName,False) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(5536,5956+(80+26)*strMulFac)) + self.assertIn(heap_memory_ref, list(range(5536, 9212 + (80 + 26 + 1) * strMulFac))) ff0.loadArrays() self.assertEqual(ff0.getHeapMemorySize()-heap_memory_ref,20*70*8*2) del ff0 # ffs=MEDFileFields(fname,False) heap_memory_ref=ffs.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(5335,6687+(80+50)*strMulFac)) + self.assertIn(heap_memory_ref, list(range(5335, 10031 + (80 + 50 + len(ffs)) * strMulFac))) ffs.loadArrays() self.assertEqual(ffs.getHeapMemorySize()-heap_memory_ref,20*70*8*2+70*8*2+50*8*2) pass @@ -3202,13 +3361,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris = [tri.deepCopy() for i in range(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads = [quad.deepCopy() for i in range(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -3317,13 +3476,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris = [tri.deepCopy() for i in range(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads = [quad.deepCopy() for i in range(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -3401,7 +3560,7 @@ class MEDLoaderTest(unittest.TestCase): m00=MEDCouplingUMesh("mesh",1) ; m00.setCoords(m0.getCoords()) ; m00.allocateCells(0) m=MEDFileUMesh() m.setMeshAtLevel(0,m00) - m.setRenumFieldArr(1,DataArrayInt(range(10,26))) + m.setRenumFieldArr(1,DataArrayInt(list(range(10,26)))) m.setFamilyFieldArr(1,DataArrayInt([-1,-1,-1,-1,-1,-2,-2,-2,-2,-2,-2,0,-1,-3,-3,-3])) m.write(fname,2) del m,a,c,m0,m00 @@ -3409,7 +3568,7 @@ class MEDLoaderTest(unittest.TestCase): m=MEDFileMesh.New(fname) self.assertEqual((),m.getNonEmptyLevels()) self.assertTrue(m.getCoords().isEqual(DataArrayDouble([(0,0),(1,0),(2,0),(3,0),(0,1),(1,1),(2,1),(3,1),(0,2),(1,2),(2,2),(3,2),(0,3),(1,3),(2,3),(3,3)]),1e-12)) - self.assertTrue(m.getNumberFieldAtLevel(1).isEqual(DataArrayInt(range(10,26)))) + self.assertTrue(m.getNumberFieldAtLevel(1).isEqual(DataArrayInt(list(range(10,26))))) self.assertTrue(m.getFamilyFieldAtLevel(1).isEqual(DataArrayInt([-1,-1,-1,-1,-1,-2,-2,-2,-2,-2,-2,0,-1,-3,-3,-3]))) pass @@ -3419,14 +3578,14 @@ class MEDLoaderTest(unittest.TestCase): m.insertNextCell([0,2,1,3]) m.setCoords(DataArrayDouble([0.,0.,1.,1.,1.,0.,0.,1.],4,2)) # - ms=[m.deepCpy() for i in xrange(4)] + ms = [m.deepCopy() for i in range(4)] for i,elt in enumerate(ms): elt.translate([float(i)*1.5,0.]) pass m0=MEDCoupling1SGTUMesh.Merge1SGTUMeshes(ms).buildUnstructured() m0.convertAllToPoly() # - ms=[m.deepCpy() for i in xrange(5)] + ms = [m.deepCopy() for i in range(5)] for i,elt in enumerate(ms): elt.translate([float(i)*1.5,1.5]) pass @@ -3457,7 +3616,7 @@ class MEDLoaderTest(unittest.TestCase): arr0=DataArrayDouble(9) ; arr0.iota() arr1=DataArrayDouble(9) ; arr1.iota(100) arr=DataArrayDouble.Meld(arr0,arr1) ; arr.setInfoOnComponents(["mm [kg]","sds [m]"]) - f.setArray(arr) ; f.checkCoherency() + f.setArray(arr) ; f.checkConsistencyLight() f.setTime(5.6,1,2) ff=MEDFileField1TS() ff.setFieldNoProfileSBT(f) @@ -3540,7 +3699,7 @@ class MEDLoaderTest(unittest.TestCase): for elt in [[0,1,2,3,4,5],[1,2,3,4,5,6],[2,3,4,5,6,7],[3,4,5,6,7,8]]:#4 m0.insertNextCell(NORM_PENTA6,elt) pass - m0.checkCoherency2() + m0.checkConsistency() m1=MEDCouplingUMesh(); m1.setName("mesh") m1.setMeshDimension(2); m1.allocateCells(5); @@ -3594,7 +3753,7 @@ class MEDLoaderTest(unittest.TestCase): pass def testMEDFileUMeshSetName(self): - """ This test is a small but important one for MEDReader in sauv mode. When .sauv file is loaded the convertion is performed in memory and a preparation is done then. + """ This test is a small but important one for MEDReader in sauv mode. When .sauv file is loaded the conversion is performed in memory and a preparation is done then. This preparation makes access to internal MEDCouplingMesh pointers whose name must be updated. """ fname="Pyfile79.med" @@ -3644,7 +3803,7 @@ class MEDLoaderTest(unittest.TestCase): # fmts=MEDFileFieldMultiTS() # - for i in xrange(nbCells): + for i in range(nbCells): t=(float(i)+0.1,i+1,-i-2) f.setTime(*t) arr2=DataArrayDouble(nbCells) @@ -3704,7 +3863,7 @@ class MEDLoaderTest(unittest.TestCase): m.changeSpaceDimension(3,0.) infos=["aa [b]","cc [de]","gg [klm]"] m.getCoords().setInfoOnComponents(infos) - m.checkCoherency2() + m.checkConsistency() mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) m1=MEDCouplingCMesh() ; m1.setCoords(arr) ; m1.setName("Mesh") @@ -3713,7 +3872,7 @@ class MEDLoaderTest(unittest.TestCase): renum0=DataArrayInt([3,6,7,10,11,0,2,1,9,8,5,4,12,13,14,24,23,22,21,20,19,18,17,16,15]) famField0=DataArrayInt([-3,-6,-7,-10,-11,0,-2,-1,-9,-8,-5,-4,-12,-13,-14,-24,-23,-22,-21,-20,-19,-18,-17,-16,-15]) namesCellL0=DataArrayAsciiChar(25,16) - namesCellL0[:]=["Cell#%.3d "%(i) for i in xrange(25)] + namesCellL0[:] = ["Cell#%.3d " % (i) for i in range(25)] renumM1=DataArrayInt([3,4,0,2,1]) famFieldM1=DataArrayInt([-3,-4,0,-2,-1]) mm.setRenumFieldArr(0,renum0) @@ -3724,7 +3883,7 @@ class MEDLoaderTest(unittest.TestCase): renum1=DataArrayInt([13,16,17,20,21,10,12,11,19,18,15,14,22,23,24,34,33,32,31,30,29,28,27,26,25,45,44,43,42,41,40,39,38,37,36,35]) famField1=DataArrayInt([-13,-16,-17,-20,-21,-10,-12,-11,-19,-18,-15,-14,-22,-23,-24,-34,-33,-32,-31,-30,-29,-28,-27,-26,-25,-45,-44,-43,-42,-41,-40,-39,-38,-37,-36,-35]) namesNodes=DataArrayAsciiChar(36,16) - namesNodes[:]=["Node#%.3d "%(i) for i in xrange(36)] + namesNodes[:] = ["Node#%.3d " % (i) for i in range(36)] mm.setRenumFieldArr(1,renum1) mm.setFamilyFieldArr(1,famField1) mm.setNameFieldAtLevel(1,namesNodes) @@ -3788,22 +3947,22 @@ class MEDLoaderTest(unittest.TestCase): m.changeSpaceDimension(3,0.) infos=["aa [b]","cc [de]","gg [klm]"] m.getCoords().setInfoOnComponents(infos) - m.checkCoherency2() + m.checkConsistency() f=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f.setMesh(m) f.setName("Field") arr=DataArrayDouble(25,2) ; arr.setInfoOnComponents(compos) - arr[:,0]=range(25) - arr[:,1]=range(100,125) + arr[:,0]=list(range(25)) + arr[:,1]=list(range(100,125)) f.setArray(arr) - MEDLoader.WriteField(fileName,f,2) + WriteField(fileName,f,True) f=MEDCouplingFieldDouble(ON_NODES,ONE_TIME) ; f.setMesh(m) f.setName("FieldNode") arr=DataArrayDouble(36,2) ; arr.setInfoOnComponents(compos) - arr[:,0]=range(200,236) - arr[:,1]=range(300,336) + arr[:,0]=list(range(200,236)) + arr[:,1]=list(range(300,336)) f.setArray(arr) - f.checkCoherency() - MEDLoader.WriteFieldUsingAlreadyWrittenMesh(fileName,f) + f.checkConsistencyLight() + WriteFieldUsingAlreadyWrittenMesh(fileName,f) # ms=MEDFileMeshes() mm=MEDFileUMesh.LoadPartOf(fileName,meshName,[NORM_QUAD4],[0,6,1]) @@ -3815,13 +3974,13 @@ class MEDLoaderTest(unittest.TestCase): mm=MEDFileUMesh.LoadPartOf(fileName,meshName,[NORM_QUAD4],[3,15,1]) ms.pushMesh(mm) fs=MEDFileFields.LoadPartOf(fileName,False,ms) - fs=fs.deepCpy() + fs=fs.deepCopy() fs[0][0].loadArrays() - arr=DataArrayDouble(12,2) ; arr[:,0]=range(3,15) ; arr[:,1]=range(103,115) + arr = DataArrayDouble(12, 2) ; arr[:, 0] = list(range(3, 15)) ; arr[:, 1] = list(range(103, 115)) arr.setInfoOnComponents(compos) self.assertTrue(fs[0][0].getUndergroundDataArray().isEqual(arr,1e-12)) fs[1][0].loadArrays() - arr=DataArrayDouble(21,2) ; arr[:,0]=range(203,224) ; arr[:,1]=range(303,324) + arr = DataArrayDouble(21, 2) ; arr[:, 0] = list(range(203, 224)) ; arr[:, 1] = list(range(303, 324)) arr.setInfoOnComponents(compos) self.assertTrue(fs[1][0].getUndergroundDataArray().isEqual(arr,1e-12)) pass @@ -3853,22 +4012,22 @@ class MEDLoaderTest(unittest.TestCase): m.changeSpaceDimension(3,0.) infos=["aa [b]","cc [de]","gg [klm]"] m.getCoords().setInfoOnComponents(infos) - m.checkCoherency2() + m.checkConsistency() f=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f.setMesh(m) f.setName("Field") arr=DataArrayDouble(25,2) ; arr.setInfoOnComponents(compos) - arr[:,0]=range(25) - arr[:,1]=range(100,125) + arr[:,0]=list(range(25)) + arr[:,1]=list(range(100,125)) f.setArray(arr) - MEDLoader.WriteField(fileName,f,2) + WriteField(fileName,f,True) f=MEDCouplingFieldDouble(ON_NODES,ONE_TIME) ; f.setMesh(m) f.setName("FieldNode") arr=DataArrayDouble(36,2) ; arr.setInfoOnComponents(compos) - arr[:,0]=range(200,236) - arr[:,1]=range(300,336) + arr[:,0]=list(range(200,236)) + arr[:,1]=list(range(300,336)) f.setArray(arr) - f.checkCoherency() - MEDLoader.WriteFieldUsingAlreadyWrittenMesh(fileName,f) + f.checkConsistencyLight() + WriteFieldUsingAlreadyWrittenMesh(fileName,f) # ms=MEDFileMeshes() mm=MEDFileUMesh.LoadPartOf(fileName,meshName,[NORM_QUAD4],[4,6,1]) @@ -3926,7 +4085,7 @@ class MEDLoaderTest(unittest.TestCase): m=MEDCouplingUMesh.MergeUMeshesOnSameCoords([m0,m1]) m.setName(meshName2D) mMinus1,a,b,c,d=m.buildDescendingConnectivity() - e=d.deltaShiftIndex().getIdsEqual(1) + e=d.deltaShiftIndex().findIdsEqual(1) # mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) ; mm.setMeshAtLevel(-1,mMinus1) @@ -3989,7 +4148,6 @@ class MEDLoaderTest(unittest.TestCase): @unittest.skipUnless(MEDCouplingHasNumPyBindings(),"requires numpy") def testMEDFileUMeshPickeling1(self): - import cPickle outFileName="Pyfile86.med" c=DataArrayDouble([-0.3,-0.3, 0.2,-0.3, 0.7,-0.3, -0.3,0.2, 0.2,0.2, 0.7,0.2, -0.3,0.7, 0.2,0.7, 0.7,0.7 ],9,2) c.setInfoOnComponents(["aa","bbb"]) @@ -4004,7 +4162,7 @@ class MEDLoaderTest(unittest.TestCase): m.insertNextCell(NORM_POLYGON,4,targetConn[14:18]) m.finishInsertingCells(); m.setCoords(c) - m.checkCoherency() + m.checkConsistencyLight() m1=MEDCouplingUMesh.New(); m1.setMeshDimension(1); m1.allocateCells(3); @@ -4013,7 +4171,7 @@ class MEDLoaderTest(unittest.TestCase): m1.insertNextCell(NORM_SEG3,3,[2,8,5]) m1.finishInsertingCells(); m1.setCoords(c) - m1.checkCoherency() + m1.checkConsistencyLight() m2=MEDCouplingUMesh.New(); m2.setMeshDimension(0); m2.allocateCells(4); @@ -4023,7 +4181,7 @@ class MEDLoaderTest(unittest.TestCase): m2.insertNextCell(NORM_POINT1,1,[6]) m2.finishInsertingCells(); m2.setCoords(c) - m2.checkCoherency() + m2.checkConsistencyLight() # mm=MEDFileUMesh.New() self.assertTrue(mm.getUnivNameWrStatus()) @@ -4051,10 +4209,10 @@ class MEDLoaderTest(unittest.TestCase): g2_1.setName("G2") mm.setGroupsAtLevel(-1,[g1_1,g2_1],False) g1_N=DataArrayInt.New() - g1_N.setValues(range(8),8,1) + g1_N.setValues(list(range(8)),8,1) g1_N.setName("G1") g2_N=DataArrayInt.New() - g2_N.setValues(range(9),9,1) + g2_N.setValues(list(range(9)),9,1) g2_N.setName("G2") mm.setGroupsAtLevel(1,[g1_N,g2_N],False) mm.createGroupOnAll(0,"GrpOnAllCell") @@ -4074,9 +4232,16 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(mm.existsGroup("GrpOnAllCell")); t=mm.getGroupArr(0,"GrpOnAllCell") # - st=cPickle.dumps(mm,cPickle.HIGHEST_PROTOCOL) - mm2=cPickle.loads(st) + st=pickle.dumps(mm,pickle.HIGHEST_PROTOCOL) + mm2=pickle.loads(st) + self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + self.assertEqual(mm.getAxisType(),AX_CART) + # + mm.setAxisType(AX_CYL) + st=pickle.dumps(mm,pickle.HIGHEST_PROTOCOL) + mm2=pickle.loads(st) self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + self.assertEqual(mm2.getAxisType(),AX_CYL) pass def testMEDFileFieldsLoadSpecificEntities1(self): @@ -4093,7 +4258,7 @@ class MEDLoaderTest(unittest.TestCase): m.setName(meshName) # fmts=MEDFileFieldMultiTS() - for i in xrange(nbPdt): + for i in range(nbPdt): f=MEDCouplingFieldDouble(ON_NODES) f.setMesh(m) arr=DataArrayDouble(nbNodes) ; arr.iota() ; arr*=i @@ -4111,14 +4276,14 @@ class MEDLoaderTest(unittest.TestCase): fs2=MEDFileFields.LoadSpecificEntities(fileName,[(ON_NODES,NORM_ERROR)],False) fs.loadArraysIfNecessary() fs2.loadArraysIfNecessary() - for i in xrange(nbPdt): + for i in range(nbPdt): self.assertTrue(fs[fieldName][i].getUndergroundDataArray().isEqual(fs2[fieldName][i].getUndergroundDataArray(),1e-12)) pass m1=MEDCouplingCMesh() ; m1.setCoords(DataArrayDouble([0,1,2,3]),DataArrayDouble([0,1])) ; m1=m1.buildUnstructured() ; m1.simplexize(0) m2=MEDCouplingCMesh() ; m2.setCoords(DataArrayDouble([3,4,5]),DataArrayDouble([0,1])) ; m2=m2.buildUnstructured() m3=MEDCouplingUMesh.MergeUMeshes(m1,m2) ; m3.setName(meshName) fmts=MEDFileFieldMultiTS() - for i in xrange(nbPdt): + for i in range(nbPdt): f=MEDCouplingFieldDouble(ON_CELLS) f.setMesh(m3) arr=DataArrayDouble(8) ; arr.iota() ; arr*=i @@ -4141,7 +4306,7 @@ class MEDLoaderTest(unittest.TestCase): fs2.loadArraysIfNecessary() fs3.loadArraysIfNecessary() fs4.loadArraysIfNecessary() - for i in xrange(nbPdt): + for i in range(nbPdt): self.assertTrue(fs[fieldName][i].getUndergroundDataArray()[:6].isEqual(fs2[fieldName][i].getUndergroundDataArray(),1e-12)) self.assertTrue(fs[fieldName][i].getUndergroundDataArray()[6:8].isEqual(fs3[i].getUndergroundDataArray(),1e-12)) self.assertTrue(fs[fieldName][i].getUndergroundDataArray().isEqual(fs4[fieldName][i].getUndergroundDataArray(),1e-12)) @@ -4162,12 +4327,12 @@ class MEDLoaderTest(unittest.TestCase): m=m.buildUnstructured() m.setName(meshName) # - nbOfField=nbPdt/maxPdt + nbOfField=nbPdt//maxPdt fs=MEDFileFields() - for j in xrange(nbOfField): + for j in range(nbOfField): fmts=MEDFileFieldMultiTS() s=DataArray.GetSlice(slice(0,nbPdt,1),j,nbOfField) - for i in xrange(s.start,s.stop,s.step): + for i in range(s.start, s.stop, s.step): f=MEDCouplingFieldDouble(ON_NODES) f.setMesh(m) arr=DataArrayDouble(nbNodes) ; arr.iota() ; arr*=i @@ -4190,7 +4355,7 @@ class MEDLoaderTest(unittest.TestCase): d[key]=[val] pass import re - allFields=MEDLoader.GetAllFieldNames(fileName) + allFields=GetAllFieldNames(fileName) allFieldsDict={} pat=re.compile("([\d]+)([\s\S]+)$") for st in allFields: @@ -4215,13 +4380,13 @@ class MEDLoaderTest(unittest.TestCase): fmts2.reverse() zeResu=fmts2.pop() nbIter=len(fmts2) - for ii in xrange(nbIter): + for ii in range(nbIter): zeResu.pushBackTimeSteps(fmts2.pop()) pass zeResu.setName(k) fs2.pushField(zeResu) pass - self.assertEqual(fs2[0].getTimeSteps(),[(i,0,float(i)) for i in xrange(nbPdt)]) + self.assertEqual(fs2[0].getTimeSteps(), [(i, 0, float(i)) for i in range(nbPdt)]) pass def testMEDFileMeshRearrangeFamIds1(self): @@ -4296,7 +4461,7 @@ class MEDLoaderTest(unittest.TestCase): field.setMesh(m) field.setArray(DataArrayDouble([1.2,2.3,3.4,4.5])) field.setName("Field") - field.checkCoherency() + field.checkConsistencyLight() pfl=DataArrayInt([0,1,2,3]) ; pfl.setName("TUTU") #<- false profile because defined on all cells ! ff.setFieldProfile(field,mm,0,pfl) # <- bug was revealed here ! self.assertEqual(ff.getPfls(),()) @@ -4316,7 +4481,7 @@ class MEDLoaderTest(unittest.TestCase): field.setMesh(m) field.setArray(DataArrayDouble([1.2,2.3,3.4,4.5])) field.setName("Field") - field.checkCoherency() + field.checkConsistencyLight() pfl=DataArrayInt([0,1,2,3]) ; pfl.setName("TUTU") ff.setFieldProfile(field,mm,0,pfl) self.assertEqual(ff.getPfls(),()) @@ -4344,7 +4509,7 @@ class MEDLoaderTest(unittest.TestCase): m3D=m.buildExtrudedMesh(m1D,0) m3D.sortCellsInMEDFileFrmt() m3D.setName(meshName) - m2D=m ; m2D.setCoords(m3D.getCoords()) ; m2D.shiftNodeNumbersInConn(delta) ; m2D.setName(meshName) ; m2D.checkCoherency2() + m2D=m ; m2D.setCoords(m3D.getCoords()) ; m2D.shiftNodeNumbersInConn(delta) ; m2D.setName(meshName) ; m2D.checkConsistency() m1D=m2D.computeSkin() ; m1D.setName(meshName) m0D=MEDCouplingUMesh.Build0DMeshFromCoords(m3D.getCoords()) ; m0D.setName(meshName) ; m0D=m0D[[2,4,10]] # @@ -4388,7 +4553,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(mm.getGroupsNames(),('grp0','grp1','grp2','grp3')) delta=12 for grp in [grp0,grp1,grp2,grp3]: - grpNode=grp.deepCpy() ; grpNode+=delta ; grpNode.setName("%s_node"%grp.getName()) + grpNode=grp.deepCopy() ; grpNode+=delta ; grpNode.setName("%s_node"%grp.getName()) mm.addGroup(1,grpNode) self.assertEqual(mm.getGroupsNames(),('grp0','grp0_node','grp1','grp1_node','grp2','grp2_node','grp3','grp3_node')) for grp in [grp0,grp1,grp2,grp3]: @@ -4403,8 +4568,7 @@ class MEDLoaderTest(unittest.TestCase): grpExp=grp+delta ; grpExp.setName("%s_node"%grp.getName()) self.assertTrue(mm.getGroupArr(1,"%s_node"%grp.getName()).isEqual(grpExp)) pass - - pass + def testMEDFileJoint1(self): fileName="Pyfile92.med" coo=DataArrayDouble([(0,0,0),(1,0,0),(2,0,0)]) @@ -4442,8 +4606,8 @@ class MEDLoaderTest(unittest.TestCase): self.assertRaises( InterpKernelException, jointsR.getJointAtPos,1) self.assertRaises( InterpKernelException, jointsR.destroyJointAtPos,1) jointsR.destroyJointAtPos(0) - - pass + pass + def testMEDFileJoint2(self): fileNameWr="Pyfile93.med" coo=DataArrayDouble([(0,0,0),(1,0,0),(2,0,0)]) @@ -4536,32 +4700,7 @@ class MEDLoaderTest(unittest.TestCase): """ EDF11242 : check status of MED file calls to detect problems immediately. Sorry this test generates awful messages !""" fname="Pyfile94.med" errfname="Pyfile94.err" - class StdOutRedirect(object): - def __init__(self,fileName): - import os,sys - sys.stderr.flush() - self.stdoutOld=os.dup(2) - self.fdOfSinkFile=os.open(fileName,os.O_CREAT | os.O_RDWR) - fd2=os.dup2(self.fdOfSinkFile,2) - self.origPyVal=sys.stderr - class FlushFile(object): - def __init__(self,f): - self.f=f - def write(self,st): - self.f.write(st) - self.f.flush() - def flush(self): - return self.f.flush() - def isatty(self): - return self.f.isatty() - sys.stderr=FlushFile(os.fdopen(self.fdOfSinkFile,"w")) - def __del__(self): - import os,sys - sys.stderr=self.origPyVal - #os.fsync(self.fdOfSinkFile) - os.fsync(2) - os.dup2(self.stdoutOld,2) - os.close(self.stdoutOld) + import os # first clean file if needed if os.path.exists(fname): @@ -4576,14 +4715,14 @@ class MEDLoaderTest(unittest.TestCase): mm.setName("mesh") mm.write(fname,2) # third : change permissions to remove write access on created file - os.chmod(fname,0444) + os.chmod(fname, 0o444) # four : try to append data on file -> check that it raises Exception f=MEDCouplingFieldDouble(ON_CELLS) f.setName("field") f.setMesh(m) f.setArray(DataArrayDouble(100)) f.getArray()[:]=100. - f.checkCoherency() + f.checkConsistencyLight() f1ts=MEDFileField1TS() f1ts.setFieldNoProfileSBT(f) # redirect stderr @@ -4611,7 +4750,7 @@ class MEDLoaderTest(unittest.TestCase): mm=MEDFileCMesh(fname) self.assertTrue(mm.getUnivName()!="") pass - + def testEmptyMesh(self): """ MEDLoader should be able to consistently write and read an empty mesh (coords array with 0 tuples """ @@ -4640,20 +4779,1462 @@ class MEDLoaderTest(unittest.TestCase): mesh=MEDFileUMesh() ; mesh[0]=m m1=m.computeSkin() ; mesh[-1]=m1 # - bary1=m1.getBarycenterAndOwner()[:,2] - grp1=bary1.getIdsInRange(hauteur-1e-12,hauteur+1e-12) ; grp1.setName(grpName1) - grp2=bary1.getIdsInRange(0.-1e-12,0.+1e-12) ; grp2.setName(grpName2) + bary1=m1.computeCellCenterOfMass()[:,2] + grp1=bary1.findIdsInRange(hauteur-1e-12,hauteur+1e-12) ; grp1.setName(grpName1) + grp2=bary1.findIdsInRange(0.-1e-12,0.+1e-12) ; grp2.setName(grpName2) mesh.setGroupsAtLevel(-1,[grp1,grp2]) - import cPickle - st=cPickle.dumps(mesh,2) - mm=cPickle.loads(st) - st2=cPickle.dumps(mm,2) - mm2=cPickle.loads(st2) + st=pickle.dumps(mesh,2) + mm=pickle.loads(st) + st2=pickle.dumps(mm,2) + mm2=pickle.loads(st2) self.assertTrue(mesh.isEqual(mm2,1e-12)[0]) pass + def testMEDFileEquivalence1(self): + """ First check of equivalence implementation in MEDFileMesh""" + fileName="Pyfile97.med" + meshName="M_01" + mm=MEDFileUMesh() + coo=DataArrayDouble([(0,0,0),(6,0,0),(19,0,0),(36,0,0),(0,4,0),(6,4,0),(19,4,0),(36,4,0),(0,13,0),(6,13,0),(19,13,0),(36,13,0),(0,24,0),(6,24,0),(19,24,0),(36,24,0),(0,0,6),(6,0,6),(19,0,6),(36,0,6),(0,4,6),(6,4,6),(19,4,6),(36,4,6),(0,13,6),(6,13,6),(19,13,6),(36,13,6),(0,24,6),(6,24,6),(19,24,6),(36,24,6),(6,0,3),(6,2,0),(12.5,0,0),(19,0,3),(19,2,0),(6,4,3),(12.5,4,0),(19,4,3),(6,2,6),(12.5,0,6),(19,2,6),(12.5,4,6),(6,2,3),(12.5,0,3),(12.5,2,0),(19,2,3),(12.5,4,3),(12.5,2,6),(12.5,2,3)]) + coo.setInfoOnComponents(["X [Sans_unite]","Y [Sans_unite]","Z [Sans_unite]"]) + connQ4=DataArrayInt([1,17,21,5,2,18,22,6,21,5,6,22,1,32,44,33,17,40,44,32,21,37,44,40,5,33,44,37,2,35,47,36,18,42,47,35,22,39,47,42,6,36,47,39,21,37,48,43,5,38,48,37,6,39,48,38,22,43,48,39]) + m1=MEDCoupling1SGTUMesh(meshName,NORM_QUAD4) ; m1.setCoords(coo) ; m1.setNodalConnectivity(connQ4) ; mm[-1]=m1 + connH8=DataArrayInt([20,16,17,21,4,0,1,5,22,18,19,23,6,2,3,7,24,20,21,25,8,4,5,9,25,21,22,26,9,5,6,10,26,22,23,27,10,6,7,11,28,24,25,29,12,8,9,13,29,25,26,30,13,9,10,14,30,26,27,31,14,10,11,15,21,40,49,43,37,44,50,48,40,17,41,49,44,32,45,50,49,41,18,42,50,45,35,47,43,49,42,22,48,50,47,39,44,32,45,50,33,1,34,46,37,44,50,48,5,33,46,38,48,50,47,39,38,46,36,6,50,45,35,47,46,34,2,36]) + m0=MEDCoupling1SGTUMesh(meshName,NORM_HEXA8) ; m0.setCoords(coo) ; m0.setNodalConnectivity(connH8) ; mm[0]=m0 + mm.getFamilyFieldAtLevel(-1)[:]=-2 + mm.getFamilyFieldAtLevel(0)[:]=0 + mm.addFamily("HOMARD________-1",-1) + mm.addFamily("HOMARD________-2",-2) + mm.addFamily("HOMARD________-3",-3) + mm.setFamiliesIdsOnGroup("HOMARD",[-1,-2,-3]) + + eqName="MAILLES_A_RECOLLER_APRES_HOMARD" + descEq="Cette equivalence decrit les mailles a recoller. Dans chaque correspondance, le premier numero est celui de la maille coupee ; le second numero est celui d'une des petites mailles en regard." + mm.initializeEquivalences() + eqs=mm.getEquivalences() + eq0=eqs.appendEmptyEquivalenceWithName(eqName) + eq0.setDescription(descEq) + corr=DataArrayInt([(0,3),(0,4),(0,5),(0,6),(1,7),(1,8),(1,9),(1,10),(2,11),(2,12),(2,13),(2,14)]) + eq0.setArray(-1,corr) + self.assertEqual(eq0.getCell().size(),1) + self.assertTrue(eq0.getCell().getArray(NORM_QUAD4).isEqual(corr)) + eq0.getCell().clear() + self.assertEqual(eq0.getCell().size(),0) + eq0.getCell().setArrayForType(NORM_QUAD4,corr) + self.assertEqual(eq0.getCell().size(),1) + self.assertTrue(eq0.getCell().getArray(NORM_QUAD4).isEqual(corr)) + mm.killEquivalences() + mm.initializeEquivalences() + eqs=mm.getEquivalences() + eq0=eqs.appendEmptyEquivalenceWithName(eqName) + eq0.setDescription(descEq) + c=eq0.initCell() + c.setArrayForType(NORM_QUAD4,corr) + self.assertEqual(eq0.getCell().size(),1) + self.assertTrue(eq0.getCell().getArray(NORM_QUAD4).isEqual(corr)) + mm2=mm.deepCopy() + self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + self.assertEqual(mm2.getEquivalences().size(),1) + self.assertTrue(mm2.getEquivalences().getEquivalence(0).getCell().getArray(NORM_QUAD4).isEqual(corr)) + mm2.getEquivalences().getEquivalence(0).getCell().getArray(NORM_QUAD4)[0,0]=2 + self.assertTrue(not mm.isEqual(mm2,1e-12)[0]) + mm2.getEquivalences().getEquivalence(0).getCell().getArray(NORM_QUAD4)[0,0]=0 + self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + mm.write(fileName,2) + # + mm3=MEDFileMesh.New(fileName) + self.assertTrue(mm.isEqual(mm3,1e-12)[0]) + pass + + def testMEDFileForFamiliesPlayer1(self): + """Non regression bug EDF11911. For serial killers using same family name to store both cells and nodes ! Only sky is the limit.""" + fileName="Pyfile98.med" + meshName="mesh" + magicSt="%s%%04i"%(MEDFileMesh.GetMagicFamilyStr()) + arr=DataArrayDouble(4) ; arr.iota() + m=MEDCouplingCMesh() ; m.setCoords(arr,arr) + m=m.buildUnstructured() + mm=MEDFileUMesh() + mm[0]=m + mm.setName(meshName) + mm.setFamilyId("FAMILLE_ZERO",0) + mm.getFamilyFieldAtLevel(0)[-3:]=-4 + mm.setFamilyId("RIDF%s"%(magicSt%0),-4) + mm.setGroupsOnFamily("RIDF%s"%(magicSt%0),["RID"]) + d=DataArrayInt(16) ; d[:]=0 ; d[[1,2,4,5]]=3 + mm.setFamilyFieldArr(1,d) + mm.setFamilyId("RIDF%s"%(magicSt%1),3) + mm.setGroupsOnFamily("RIDF%s"%(magicSt%1),["RID"]) + self.assertEqual(mm.getFamiliesNames(),("FAMILLE_ZERO",'RIDF!/__\\!0000','RIDF!/__\\!0001')) + self.assertEqual(mm.getFamiliesNamesWithFilePointOfView(),("FAMILLE_ZERO","RIDF","RIDF")) # <- the aim of test is here ! + self.assertEqual(mm.getFamiliesIdsOnGroup("RID"),(-4,3)) + mm.write(fileName,2) + # now read such funny file ! + mm2=MEDFileMesh.New(fileName) # <- normally mdump of Pyfile98.med must contain only RID and FAMILLE_ZERO families. + self.assertTrue(mm.isEqual(mm2,1e-16)) + self.assertEqual(mm2.getFamiliesNames(),("FAMILLE_ZERO",'RIDF!/__\\!0000','RIDF!/__\\!0001')) + self.assertEqual(mm2.getFamiliesNamesWithFilePointOfView(),("FAMILLE_ZERO","RIDF","RIDF")) + self.assertEqual(mm2.getFamiliesIdsOnGroup("RID"),(-4,3))# <- very important too ! + pass + + def testCartesianizer1(self): + """ This test is advanced to be sure that no unnecessary copies had been made during cartesianization process. """ + # UMesh non cart + arr=DataArrayDouble(4) ; arr.iota() ; m=MEDCouplingCMesh() ; m.setCoords(arr,arr) ; m=m.buildUnstructured() + mm=MEDFileUMesh() ; mm[0]=m ; mm.forceComputationOfParts() + d0=DataArrayInt(16) ; d0[:]=0 + d1=DataArrayInt(9) ; d1[:]=0 + mm.setFamilyFieldArr(0,d1) ; mm.setFamilyFieldArr(1,d0) + mm.setName("a") ; mm.setDescription("b") ; mm.setTime(3,4,5.) ; mm.addFamily("c",-4) ; mm.setFamiliesOnGroup("d",["c"]) ; mm.setTimeUnit("ms") + ref0=mm.getCoords().getHiddenCppPointer() + ref1=mm[0].getNodalConnectivity().getHiddenCppPointer() + self.assertEqual(ref0,mm[0].getCoords().getHiddenCppPointer()) + ref2=mm[0].getNodalConnectivityIndex().getHiddenCppPointer() + ref3=mm.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getNodalConnectivity().getHiddenCppPointer() + self.assertEqual(ref0,mm.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getCoords().getHiddenCppPointer()) + mm.setAxisType(AX_CYL) #<- important + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + mm.setAxisType(AX_CART) # this is here only to avoid complaints + self.assertTrue(isinstance(mm2,MEDFileUMesh)) + self.assertTrue(mm.getHiddenCppPointer()!=mm2.getHiddenCppPointer()) + self.assertTrue(ref0==mm.getCoords().getHiddenCppPointer()) # <- here important + self.assertTrue(ref0!=mm2.getCoords().getHiddenCppPointer()) # <- here important + self.assertEqual(mm2.getCoords().getHiddenCppPointer(),mm2[0].getCoords().getHiddenCppPointer()) + self.assertEqual(mm2.getCoords().getHiddenCppPointer(),mm2.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getCoords().getHiddenCppPointer()) + self.assertEqual(mm2[0].getNodalConnectivity().getHiddenCppPointer(),ref1) # <- here very important + self.assertEqual(mm2[0].getNodalConnectivityIndex().getHiddenCppPointer(),ref2) # <- here very important + self.assertEqual(mm2.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getNodalConnectivity().getHiddenCppPointer(),ref3) # <- here very important + self.assertEqual(mm2.getName(),mm.getName()) + self.assertEqual(mm2.getDescription(),mm.getDescription()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTimeUnit(),mm.getTimeUnit()) + self.assertEqual(mm2.getGroupsNames(),mm.getGroupsNames()) + self.assertEqual(mm2.getFamiliesNames(),mm.getFamiliesNames()) + self.assertEqual([mm2.getFamilyId(elt) for elt in mm2.getFamiliesNames()],[mm.getFamilyId(elt2) for elt2 in mm.getFamiliesNames()]) + self.assertEqual(mm.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) # <- here very important + self.assertEqual(mm.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) # <- here very important + # UMesh cart + mm.setAxisType(AX_CART) + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileUMesh)) + self.assertTrue(mm.getHiddenCppPointer()==mm2.getHiddenCppPointer()) # optimization + # CurveLinearMesh non cart + arr=DataArrayDouble(4) ; arr.iota() ; m=MEDCouplingCMesh() ; m.setCoords(arr,arr) ; m=m.buildCurveLinear() + mm=MEDFileCurveLinearMesh() ; mm.setMesh(m) ; mm.setAxisType(AX_CYL) #<- important + mm.setFamilyFieldArr(0,d1) ; mm.setFamilyFieldArr(1,d0) + mm.setName("a") ; mm.setDescription("b") ; mm.setTime(3,4,5.) ; mm.addFamily("c",-4) ; mm.setFamiliesOnGroup("d",["c"]) ; mm.setTimeUnit("ms") + ref0=mm.getMesh().getCoords().getHiddenCppPointer() + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCurveLinearMesh)) + self.assertTrue(mm.getHiddenCppPointer()!=mm2.getHiddenCppPointer()) + self.assertTrue(ref0==mm.getMesh().getCoords().getHiddenCppPointer()) # <- here important + self.assertTrue(ref0!=mm2.getMesh().getCoords().getHiddenCppPointer()) # <- here important + self.assertEqual(mm2.getMesh().getNodeGridStructure(),mm.getMesh().getNodeGridStructure()) + self.assertEqual(mm2.getName(),mm.getName()) + self.assertEqual(mm2.getDescription(),mm.getDescription()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTimeUnit(),mm.getTimeUnit()) + self.assertEqual(mm2.getGroupsNames(),mm.getGroupsNames()) + self.assertEqual(mm2.getFamiliesNames(),mm.getFamiliesNames()) + self.assertEqual([mm2.getFamilyId(elt) for elt in mm2.getFamiliesNames()],[mm.getFamilyId(elt2) for elt2 in mm.getFamiliesNames()]) + self.assertEqual(mm.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) # <- here very important + self.assertEqual(mm.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) # <- here very important + # CurveLinearMesh cart + mm.setAxisType(AX_CART) + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCurveLinearMesh)) + self.assertTrue(mm.getHiddenCppPointer()==mm2.getHiddenCppPointer()) # optimization + # CMesh non cart + arr=DataArrayDouble(4) ; arr.iota() ; m=MEDCouplingCMesh() ; m.setCoords(arr,arr) + mm=MEDFileCMesh() ; mm.setMesh(m) ; mm.setAxisType(AX_CYL) #<- important + mm.setFamilyFieldArr(0,d1) ; mm.setFamilyFieldArr(1,d0) + mm.setName("a") ; mm.setDescription("b") ; mm.setTime(3,4,5.) ; mm.addFamily("c",-4) ; mm.setFamiliesOnGroup("d",["c"]) ; mm.setTimeUnit("ms") + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCurveLinearMesh)) + self.assertEqual(mm2.getMesh().getNodeGridStructure(),mm.getMesh().getNodeGridStructure()) + self.assertEqual(mm2.getName(),mm.getName()) + self.assertEqual(mm2.getDescription(),mm.getDescription()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTimeUnit(),mm.getTimeUnit()) + self.assertEqual(mm2.getGroupsNames(),mm.getGroupsNames()) + self.assertEqual(mm2.getFamiliesNames(),mm.getFamiliesNames()) + self.assertEqual([mm2.getFamilyId(elt) for elt in mm2.getFamiliesNames()],[mm.getFamilyId(elt2) for elt2 in mm.getFamiliesNames()]) + self.assertEqual(mm.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) # <- here very important + self.assertEqual(mm.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) # <- here very important + # CMesh cart + mm.setAxisType(AX_CART) + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCMesh)) + self.assertTrue(mm.getHiddenCppPointer()==mm2.getHiddenCppPointer()) # optimization + pass + + def testCheckCoherency(self): + m2 = MEDCouplingUMesh("2d", 2) + m2.setCoords(DataArrayDouble([(0.0, 1.0)] * 4, 4,2)) # whatever + m2.setConnectivity(DataArrayInt([NORM_TRI3, 0,1,2,NORM_TRI3, 1,2,3]), DataArrayInt(([0,4,8]))) + m1 , _, _ , _, _ = m2.buildDescendingConnectivity() + mum = MEDFileUMesh() + mum.setMeshAtLevel(0, m2) + mum.setMeshAtLevel(-1, m1) + mum.checkConsistency() + mum2 = mum.deepCopy() + + # Nodes + arr = DataArrayInt([2]*4) + mum.setFamilyFieldArr(1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*4) + mum.setRenumFieldArr(1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + mum.setRenumFieldArr(1, DataArrayInt([2]*4)) + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayAsciiChar(['tutu x']*4) + mum.setNameFieldAtLevel(1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + + # 2D + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*2) + mum.setFamilyFieldArr(0, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*2) + mum.setRenumFieldArr(0, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + mum.setRenumFieldArr(0, DataArrayInt([2]*2)) + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayAsciiChar(['tutu x']*2) + mum.setNameFieldAtLevel(0, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + + # 1D + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*5) + mum.setFamilyFieldArr(-1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*5) + mum.setRenumFieldArr(-1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + mum.setRenumFieldArr(-1, DataArrayInt([2]*5)) + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayAsciiChar(['tutu x']*5) + mum.setNameFieldAtLevel(-1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + + def testCheckSMESHConsistency(self): + m2 = MEDCouplingUMesh("2d", 2) + m2.setCoords(DataArrayDouble([(0.0, 1.0)] * 4, 4,2)) # whatever + m2.setConnectivity(DataArrayInt([NORM_TRI3, 0,1,2,NORM_TRI3, 1,2,3]), DataArrayInt(([0,4,8]))) + m1 , _, _ , _, _ = m2.buildDescendingConnectivity() + mum = MEDFileUMesh() + mum.setMeshAtLevel(0, m2) + mum.setMeshAtLevel(-1, m1) + mum.checkConsistency() + mum.checkSMESHConsistency() + n2 = DataArrayInt(m2.getNumberOfCells(), 1); n2.iota(1) + n1 = DataArrayInt(m1.getNumberOfCells(), 1); n1.iota(1) + mum.setRenumFieldArr(0, n2) + mum.setRenumFieldArr(-1, n1) + self.assertRaises(InterpKernelException, mum.checkSMESHConsistency) + mum.setRenumFieldArr(-1, n1+100) + mum.checkSMESHConsistency() + pass + + def testClearNodeAndCellNumbers(self): + m2 = MEDCouplingUMesh("2d", 2) + m2.setCoords(DataArrayDouble([(0.0, 1.0)] * 4, 4,2)) # whatever + m2.setConnectivity(DataArrayInt([NORM_TRI3, 0,1,2,NORM_TRI3, 1,2,3]), DataArrayInt(([0,4,8]))) + m1 , _, _ , _, _ = m2.buildDescendingConnectivity() + mum = MEDFileUMesh() + mum.setMeshAtLevel(0, m2) + mum.setMeshAtLevel(-1, m1) + mum.checkConsistency() + n2 = DataArrayInt(m2.getNumberOfCells(), 1); n2.iota(1) + n1 = DataArrayInt(m1.getNumberOfCells(), 1); n1.iota(1) + mum.setRenumFieldArr(0, n2) + mum.setRenumFieldArr(-1, n1) + mum.clearNodeAndCellNumbers() + mum.checkSMESHConsistency() + pass + + def testCMeshSetFamilyFieldArrNull(self): + meshName="mesh" + fname="Pyfile99.med" + arrX=DataArrayDouble([0,1,2,3]) + arrY=DataArrayDouble([0,1,2]) + m=MEDCouplingCMesh() ; m.setCoords(arrX,arrY) ; m.setName(meshName) + mm=MEDFileCMesh() ; mm.setMesh(m) + famCellIds=DataArrayInt([0,-2,-2,-1,-2,0]) + famNodeIds=DataArrayInt([0,0,0,3,4,1,2,7,2,1,0,0]) + mm.setFamilyFieldArr(0,famCellIds) + mm.setFamilyFieldArr(1,famNodeIds) + mm.write(fname,2) + mm=MEDFileMesh.New(fname) + self.assertTrue(mm.getFamilyFieldAtLevel(0) is not None) + self.assertTrue(mm.getFamilyFieldAtLevel(1) is not None) + mm.setFamilyFieldArr(0,None)#<- bug was here + mm.setFamilyFieldArr(1,None)#<- bug was here + self.assertTrue(mm.getFamilyFieldAtLevel(0) is None) + self.assertTrue(mm.getFamilyFieldAtLevel(1) is None) + mm3=mm.deepCopy() + self.assertTrue(mm3.getFamilyFieldAtLevel(0) is None) + self.assertTrue(mm3.getFamilyFieldAtLevel(1) is None) + mm.write(fname,2) + mm2=MEDFileMesh.New(fname) + self.assertTrue(mm2.getFamilyFieldAtLevel(0) is None) + self.assertTrue(mm2.getFamilyFieldAtLevel(1) is None) + pass + + def testAppendFieldProfileOnIntField(self): + fname="Pyfile100.med" + arrX=DataArrayDouble([0,1,2,3]) + arrY=DataArrayDouble([0,1,2]) + mesh=MEDCouplingCMesh() ; mesh.setCoords(arrX,arrY) ; mesh.setName("Mesh") + mm=MEDFileCMesh() + mm.setMesh(mesh) + # + fmts=MEDFileIntFieldMultiTS() + pflName="PFL" + pfl=DataArrayInt([1,3,5]) ; pfl.setName(pflName) + f=MEDCouplingFieldInt(ON_CELLS) ; f.setMesh(mesh) + fieldName="FieldOnCell" + f.setTime(1.2,1,1) ; f.setName(fieldName) + arr=DataArrayInt([101,102,103]) ; f.setArray(arr) + fmts.appendFieldProfile(f,mm,0,pfl) + # + mm.write(fname,2) + fmts.write(fname,0) + # + mm=MEDFileMesh.New(fname) + fmts=MEDFileAnyTypeFieldMultiTS.New(fname) + self.assertTrue(isinstance(fmts,MEDFileIntFieldMultiTS)) + self.assertEqual(fmts.getName(),fieldName) + self.assertEqual(len(fmts),1) + f1ts=fmts[0] + ftest,pfltest=f1ts.getFieldWithProfile(ON_CELLS,0,mm) + self.assertEqual(pfltest.getName(),pflName) + self.assertEqual(ftest.getName(),fieldName) + self.assertTrue(ftest.isEqualWithoutConsideringStr(arr)) + ftest2=f1ts.getFieldOnMeshAtLevel(ON_CELLS,0,mm) + self.assertTrue(ftest2.getArray().isEqualWithoutConsideringStr(arr)) + self.assertEqual(ftest2.getTime(),f.getTime()) + self.assertEqual(ftest2.getMesh().getNumberOfCells(),len(arr)) + pass + + def testMEDFileFieldEasyField1(self): + """Check for all spatial discretization of field (cells,nodes,elno,gauss) for double field that all is OK. Here no profile and only top level is considered.""" + ## Basic test on cells on top level + fname="Pyfile101.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[0]=m + mm.write(fname,2) + arr0=DataArrayDouble([10,11,12,13,100,101]) + f=MEDCouplingFieldDouble(ON_CELLS) ; f.setArray(arr0) ; f.setMesh(m) + f.setName(fieldName) ; f.setTime(2.,6,7) + f0=f.deepCopy() + ff=MEDFileFieldMultiTS() ; ff.appendFieldNoProfileSBT(f) + ff.write(fname,0) + arr2=arr0+1000 ; f.setArray(arr2) + f.setTime(3.,8,9) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f) + ff.write(fname,0) + f1=f.deepCopy() + ## + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,6,7) + ftst0=f1ts.field(mm) + self.assertTrue(f0.isEqual(ftst0,1e-12,1e-12)) + f1ts=MEDFileField1TS(fname,fieldName,8,9) + ftst1=f1ts.field(mm) + self.assertTrue(f1.isEqual(ftst1,1e-12,1e-12)) + fmts=MEDFileFieldMultiTS(fname,fieldName) + self.assertTrue(f1.isEqual(fmts.field(8,9,mm),1e-12,1e-12)) + ## Basic test on nodes on top level + f2=MEDCouplingFieldDouble(ON_NODES) ; arr2=DataArrayDouble([200,201,202]) ; arr2.setInfoOnComponent(0,"tutu") ; f2.setArray(arr2) ; f2.setMesh(m) ; f2.setTime(22.,23,24) + f2.setName(fieldName) + mm.write(fname,2) + ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f2) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,23,24) + self.assertTrue(f2.isEqual(f1ts.field(mm),1e-12,1e-12)) + fmts=MEDFileFieldMultiTS(fname,fieldName) + self.assertTrue(f2.isEqual(fmts.field(23,24,mm),1e-12,1e-12)) + ## Node on elements + f3=MEDCouplingFieldDouble(ON_GAUSS_NE) ; f3.setMesh(m) ; arr3=DataArrayDouble([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,1e-12)) + ## Gauss + f4=MEDCouplingFieldDouble(ON_GAUSS_PT) ; f4.setMesh(m) ; f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayDouble([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testMEDFileFieldEasyField2(self): + """Same thantestMEDFileFieldEasyField1 except that here intfields are considered. + Check for all spatial discretization of field (cells,nodes,elno,gauss) for int field that all is OK. Here no profile and only top level is considered.""" + ## Basic test on cells on top level + fname="Pyfile102.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[0]=m + mm.write(fname,2) + arr0=DataArrayInt([10,11,12,13,100,101]) + f=MEDCouplingFieldInt(ON_CELLS) ; f.setArray(arr0) ; f.setMesh(m) + f.setName(fieldName) ; f.setTime(2.,6,7) + f0=f.deepCopy() + ff=MEDFileIntFieldMultiTS() ; ff.appendFieldNoProfileSBT(f) + ff.write(fname,0) + arr2=arr0+1000 ; f.setArray(arr2) + f.setTime(3.,8,9) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f) + ff.write(fname,0) + f1=f.deepCopy() + ## + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,6,7) + ftst0=f1ts.field(mm) + self.assertTrue(f0.isEqual(ftst0,1e-12,0)) + f1ts=MEDFileIntField1TS(fname,fieldName,8,9) + ftst1=f1ts.field(mm) + self.assertTrue(f1.isEqual(ftst1,1e-12,0)) + fmts=MEDFileIntFieldMultiTS(fname,fieldName) + self.assertTrue(f1.isEqual(fmts.field(8,9,mm),1e-12,0)) + ## Basic test on nodes on top level + f2=MEDCouplingFieldInt(ON_NODES) ; arr2=DataArrayInt([200,201,202]) ; arr2.setInfoOnComponent(0,"tutu") ; f2.setArray(arr2) ; f2.setMesh(m) ; f2.setTime(22.,23,24) + f2.setName(fieldName) + mm.write(fname,2) + ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f2) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,23,24) + self.assertTrue(f2.isEqual(f1ts.field(mm),1e-12,0)) + fmts=MEDFileIntFieldMultiTS(fname,fieldName) + self.assertTrue(f2.isEqual(fmts.field(23,24,mm),1e-12,0)) + ## Node on elements + f3=MEDCouplingFieldInt(ON_GAUSS_NE) ; f3.setMesh(m) ; arr3=DataArrayInt([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,0)) + ## Gauss + f4=MEDCouplingFieldInt(ON_GAUSS_PT) ; f4.setMesh(m) ; f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayInt([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,0)) + pass + + def testMEDFileFieldEasyField3(self): + """Here a multi level mesh. And field on cells lying on different level of this mesh. Show how "field" method deal with that. Here on field double are considered.""" + fname="Pyfile103.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[-1]=m + m0=MEDCouplingUMesh("mesh",3) ; m0.setCoords(coo) + m0.allocateCells() + m0.insertNextCell(NORM_TETRA4,[3,2,5,0]) + m0.insertNextCell(NORM_TETRA4,[7,6,3,2]) + mm[0]=m0 + mm.write(fname,2) + # start slowly + f1=MEDCouplingFieldDouble(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayDouble([(0,100),(1,101)])) ; f1.setMesh(mm[0]) ; f1.setTime(4.,1,2) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,1,2) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,1e-12)) + # here f1 lying on level -1 not 0 check if "field" method detect it ! + f1=MEDCouplingFieldDouble(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayDouble([(0,100),(1,101),(0,100),(1,101),(0,100),(1,101)])) + f1.setMesh(mm[-1]) # -1 is very important + f1.setTime(16.,3,4) + f1.checkConsistencyLight() + mm.write(fname,2) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,3,4) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,1e-12)) + # nodes on elements + f3=MEDCouplingFieldDouble(ON_GAUSS_NE) + f3.setMesh(mm[-1]) # this line is important + arr3=DataArrayDouble([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,1e-12)) + # gauss + f4=MEDCouplingFieldDouble(ON_GAUSS_PT) + f4.setMesh(mm[-1]) # this line is important + f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayDouble([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testMEDFileFieldEasyField4(self): + """ Same than testMEDFileFieldEasyField3 but with integers""" + fname="Pyfile104.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[-1]=m + m0=MEDCouplingUMesh("mesh",3) ; m0.setCoords(coo) + m0.allocateCells() + m0.insertNextCell(NORM_TETRA4,[3,2,5,0]) + m0.insertNextCell(NORM_TETRA4,[7,6,3,2]) + mm[0]=m0 + mm.write(fname,2) + # start slowly + f1=MEDCouplingFieldInt(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayInt([(0,100),(1,101)])) ; f1.setMesh(mm[0]) ; f1.setTime(4.,1,2) + f1ts=MEDFileIntField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,1,2) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,0)) + # here f1 lying on level -1 not 0 check if "field" method detect it ! + f1=MEDCouplingFieldInt(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayInt([(0,100),(1,101),(0,100),(1,101),(0,100),(1,101)])) + f1.setMesh(mm[-1]) # -1 is very important + f1.setTime(16.,3,4) + f1.checkConsistencyLight() + mm.write(fname,2) + f1ts=MEDFileIntField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,3,4) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,0)) + # nodes on elements + f3=MEDCouplingFieldInt(ON_GAUSS_NE) + f3.setMesh(mm[-1]) # this line is important + arr3=DataArrayInt([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,0)) + # gauss + f4=MEDCouplingFieldInt(ON_GAUSS_PT) + f4.setMesh(mm[-1]) # this line is important + f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayInt([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,0)) + pass + + def testMEDFileFieldEasyField5(self): + """More and more difficult now look at how profiles are managed by "field" method.""" + fname="Pyfile105.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[0]=m + mm.write(fname,2) + pfl=DataArrayInt([0,2,3,5]) ; pfl.setName("pfl") + m2=m.deepCopy()[pfl] ; m2.setName(m.getName()) + # + arr0=DataArrayDouble([10,11,12,13]) + f=MEDCouplingFieldDouble(ON_CELLS) ; f.setArray(arr0) ; f.setMesh(m2) + f.setName(fieldName) ; f.setTime(2.,6,7) ; f.checkConsistencyLight() + ff=MEDFileFieldMultiTS() ; ff.appendFieldProfile(f,mm,0,pfl) # ff is a field on profile + ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,6,7) + self.assertTrue(f.isEqual(f1ts.field(mm),1e-12,1e-12)) + # more complicated -> multi level + m0=MEDCouplingUMesh("mesh",3) ; m0.setCoords(coo) + m0.allocateCells() + m0.insertNextCell(NORM_TETRA4,[3,2,5,0]) + m0.insertNextCell(NORM_TETRA4,[7,6,3,2]) + mm2=MEDFileUMesh() + mm2[0]=m0 ; mm2[-1]=m + # + ff=MEDFileField1TS() ; ff.setFieldProfile(f,mm2,-1,pfl) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,6,7) + self.assertTrue(f.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testExtractPart1(self): + coo=DataArrayDouble([(0,0),(1,0),(2,0),(3,0),(4,0),(0,1),(1,1),(2,1),(3,1),(4,1),(0,2),(1,2),(2,2),(3,2),(4,2)]) + meshName="mesh" + m0=MEDCouplingUMesh(meshName,2) ; m0.setCoords(coo) ; m0.allocateCells() + m0.insertNextCell(NORM_TRI3,[8,4,3]) + m0.insertNextCell(NORM_TRI3,[8,9,4]) + m0.insertNextCell(NORM_TRI3,[7,13,8]) + m0.insertNextCell(NORM_TRI3,[7,12,13]) + m0.insertNextCell(NORM_TRI3,[0,6,1]) + m0.insertNextCell(NORM_TRI3,[0,5,6]) + m0.insertNextCell(NORM_QUAD4,[1,6,7,2]) + m0.insertNextCell(NORM_QUAD4,[2,7,8,3]) + m0.insertNextCell(NORM_QUAD4,[8,13,14,9]) + m0.insertNextCell(NORM_QUAD4,[6,11,12,7]) + m0.insertNextCell(NORM_QUAD4,[5,10,11,6]) + # + m1=MEDCouplingUMesh(meshName,1) ; m1.setCoords(coo) ; m1.allocateCells() + m1.insertNextCell(NORM_SEG2,[10,5]) + m1.insertNextCell(NORM_SEG2,[5,0]) + m1.insertNextCell(NORM_SEG2,[0,1]) + m1.insertNextCell(NORM_SEG2,[1,2]) + m1.insertNextCell(NORM_SEG2,[2,3]) + m1.insertNextCell(NORM_SEG2,[3,4]) + m1.insertNextCell(NORM_SEG2,[4,9]) + m1.insertNextCell(NORM_SEG2,[9,14]) + m1.insertNextCell(NORM_SEG2,[14,13]) + m1.insertNextCell(NORM_SEG2,[13,12]) + m1.insertNextCell(NORM_SEG2,[12,11]) + m1.insertNextCell(NORM_SEG2,[11,10]) + mm=MEDFileUMesh() + mm[0]=m0 ; mm[-1]=m1 + arr0=DataArrayInt([0,1,2,3,4,6,7,8,12,13]) + tab={} # + tab[0]=DataArrayInt([0,2,3,4,6,7]) + tab[-1]=DataArrayInt([2,3,4,5,9]) + fs=MEDFileFields() + self.assertTrue(mm.deduceNodeSubPartFromCellSubPart(tab).isEqual(arr0)) + tab[1]=arr0 + # + fname0="Field0" + fmts=MEDFileFieldMultiTS() ; fs.pushField(fmts) + t0=(16.5,3,4) + ic=["toto [m]"] + arr0_0=DataArrayDouble([100,101,102,103,104,105,106,107,108,109,110]) ; arr0_0.setInfoOnComponents(ic) + f0=MEDCouplingFieldDouble(ON_CELLS) ; f0.setTime(*t0) ; f0.setArray(arr0_0) + f0.setMesh(m0) ; f0.setName(fname0) + f1=MEDCouplingFieldDouble(ON_CELLS) ; f1.setTime(*t0) ; f1.setArray(DataArrayDouble([200,201,202,203,204,205,206,207,208,209,210,211])) + f1.setMesh(m1) ; f1.setName(fname0) ; f1.getArray().setInfoOnComponents(ic) + f2=MEDCouplingFieldDouble(ON_NODES) ; f2.setTime(*t0) ; f2.setArray(DataArrayDouble([300,301,302,303,304,305,306,307,308,309,310,311,312,313,314])) + f2.setMesh(m0) ; f2.setName(fname0) ; f2.getArray().setInfoOnComponents(ic) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f0) ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.setFieldNoProfileSBT(f2) + fmts.pushBackTimeStep(f1ts) + # + mmOut=mm.extractPart(tab) + # + fsPart0=fs.extractPart(tab,mm) + self.assertEqual(len(fsPart0),1) + fmtsP=fsPart0[0] + self.assertEqual(len(fmtsP),1) + f1ts=fmtsP[0] + self.assertRaises(InterpKernelException,f1ts.field,mmOut) + # + self.assertTrue(mmOut[0].computeCellCenterOfMass().isEqual(m0[tab[0]].computeCellCenterOfMass(),1e-12)) + self.assertTrue(mmOut[-1].computeCellCenterOfMass().isEqual(m1[tab[-1]].computeCellCenterOfMass(),1e-12)) + # + m0Part=m0.deepCopy()[tab[0]] ; m0Part.renumberNodes(tab[1].invertArrayN2O2O2N(mm.getNumberOfNodes()),len(tab[1])) ; m0Part.setName(m0.getName()) + self.assertTrue(mmOut[0].isEqual(m0Part,1e-12)) + m1Part=m1.deepCopy()[tab[-1]] ; m1Part.renumberNodes(tab[1].invertArrayN2O2O2N(mm.getNumberOfNodes()),len(tab[1])) ; m1Part.setName(m0.getName()) + self.assertTrue(mmOut[0].isEqual(m0Part,1e-12)) + self.assertTrue(mmOut[-1].isEqual(m1Part,1e-12)) + # + f0Part=f1ts.getFieldOnMeshAtLevel(ON_CELLS,0,mmOut) ; f0Part.checkConsistencyLight() + self.assertEqual(f0Part.getTypeOfField(),ON_CELLS) + self.assertTrue(f0Part.getMesh().isEqual(m0Part,1e-12)) + arr0Exp=DataArrayDouble([100,102,103,104,106,107]) ; arr0Exp.setInfoOnComponents(ic) + self.assertTrue(f0Part.getArray().isEqual(arr0Exp,1e-12)) ; self.assertEqual(f0Part.getTime(),list(t0)) + f1Part=f1ts.getFieldOnMeshAtLevel(ON_CELLS,-1,mmOut) ; f1Part.checkConsistencyLight() + self.assertEqual(f1Part.getTypeOfField(),ON_CELLS) + self.assertTrue(f1Part.getMesh().isEqual(m1Part,1e-12)) + arr1Exp=DataArrayDouble([202,203,204,205,209]) ; arr1Exp.setInfoOnComponents(ic) + self.assertTrue(f1Part.getArray().isEqual(arr1Exp,1e-12)) ; self.assertEqual(f1Part.getTime(),list(t0)) + # + f2Part=f1ts.getFieldOnMeshAtLevel(ON_NODES,0,mmOut) ; f2Part.checkConsistencyLight() + arr2Exp=DataArrayDouble([300,301,302,303,304,306,307,308,312,313]) ; arr2Exp.setInfoOnComponents(ic) + self.assertTrue(f2Part.getArray().isEqual(arr2Exp,1e-12)) ; self.assertEqual(f2Part.getTime(),list(t0)) + # multisteps + fs=MEDFileFields() ; fmts=MEDFileFieldMultiTS() ; fs.pushField(fmts) + tss=[(16.5,3,4),(17.5,4,5),(18.5,5,6)] + for i,tt in enumerate(tss): + f0=MEDCouplingFieldDouble(ON_CELLS) ; f0.setTime(*tt) + myarr=arr0_0+i*1000. + f0.setArray(myarr) + f0.setMesh(m0) ; f0.setName(fname0) ; f0.getArray().setInfoOnComponents(ic) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f0) ; fmts.pushBackTimeStep(f1ts) + pass + fsPart1=fs.extractPart(tab,mm) + self.assertEqual(len(fsPart1),1) + fmtsP=fsPart1[0] + self.assertEqual(len(fmtsP),len(tss)) + for i,(f1tsP,tt) in enumerate(zip(fmtsP,tss)): + fPart=f1tsP.field(mmOut) ; fPart.checkConsistencyLight() + self.assertEqual(fPart.getTypeOfField(),ON_CELLS) + arr0Exp=DataArrayDouble([100,102,103,104,106,107]) ; arr0Exp.setInfoOnComponents(ic) ; arr0Exp+=i*1000. + self.assertTrue(fPart.getMesh().isEqual(m0Part,1e-12)) + self.assertTrue(fPart.getArray().isEqual(arr0Exp,1e-12)) + self.assertEqual(fPart.getTime(),list(tt)) + pass + pass + + def testSymmetryPlusAggregationMFD1(self): + """ Testing of MEDFileData::Aggregate and MEDFileUMesh::Aggregate and MEDFileUMesh::getAllDistributionOfType """ + fname1="Pyfile106_1.med" + fname2="Pyfile106_2.med" + fname3="Pyfile106_3.med" + meshName="mesh" + mm1=MEDFileUMesh() + da1=DataArrayDouble([1,2,10,3,4,11,5,6,12,7,8,13],4,3) ; da1.setInfoOnComponents(["aa [m]","bbb [kg]","cccc [MW]"]) + mm1.setCoords(da1) + mm1_0=MEDCouplingUMesh(meshName,3) ; mm1_0.allocateCells() + mm1_0.setCoords(da1) + mm1_0.insertNextCell(NORM_TETRA4,[0,1,2,3]) + mm1_0.insertNextCell(NORM_TETRA4,[4,5,6,7]) + mm1_0.insertNextCell(NORM_PENTA6,[8,9,10,11,12,13]) + mm1_0.insertNextCell(NORM_PENTA6,[14,15,16,17,18,19]) + mm1_0.insertNextCell(NORM_PENTA6,[20,21,22,23,24,25]) + mm1[0]=mm1_0 + mm1.setFamilyFieldArr(0,DataArrayInt([1,2,3,4,5])) + mm1.setRenumFieldArr(0,DataArrayInt([11,12,13,14,15])) + # + mm1_1=MEDCouplingUMesh(meshName,2) ; mm1_1.allocateCells() + mm1_1.setCoords(da1) + mm1_1.insertNextCell(NORM_TRI3,[0,1,2]) + mm1_1.insertNextCell(NORM_TRI3,[3,4,5]) + mm1_1.insertNextCell(NORM_QUAD4,[6,7,8,9]) + mm1_1.insertNextCell(NORM_QUAD4,[10,11,12,13]) + mm1_1.insertNextCell(NORM_QUAD4,[14,15,16,17]) + mm1_1.insertNextCell(NORM_QUAD4,[18,19,20,21]) + mm1[-1]=mm1_1 + mm1.setFamilyFieldArr(-1,DataArrayInt([6,7,8,9,10,11])) + mm1.setRenumFieldArr(-1,DataArrayInt([16,17,18,19,20,21])) + for i in range(1,10): + mm1.setFamilyId("F%d"%i,i) + mm1.setFamilyId("FAMILLE_ZERO",0) + mm1.setFamilyId("H1",100) + mm1.setFamiliesOnGroup("myGRP",["F2","F6"]) + mm1.setFamiliesOnGroup("myGRP1",["F2","F6"]) + mm1.setFamilyFieldArr(1,DataArrayInt([12,13,14,15])) + mm1.setRenumFieldArr(1,DataArrayInt([22,23,24,25])) + ############## + mm2=MEDFileUMesh() + da1=DataArrayDouble([9,10,30,11,12,31,13,14,32,15,16,33,17,18,34],5,3) ; da1.setInfoOnComponents(["aa [m]","bbb [kg]","cccc [MW]"]) + mm2.setCoords(da1) + mm2_0=MEDCouplingUMesh(meshName,3) ; mm2_0.allocateCells() + mm2_0.setCoords(da1) + mm2_0.insertNextCell(NORM_TETRA4,[100,101,102,103]) + mm2_0.insertNextCell(NORM_TETRA4,[104,105,106,107]) + mm2_0.insertNextCell(NORM_TETRA4,[108,109,110,111]) + mm2_0.insertNextCell(NORM_PENTA6,[112,113,114,115,116,117]) + mm2[0]=mm2_0 + mm2.setFamilyFieldArr(0,DataArrayInt([40,41,42,43])) + mm2.setRenumFieldArr(0,DataArrayInt([50,51,52,53])) + # + mm2_1=MEDCouplingUMesh(meshName,2) ; mm2_1.allocateCells() + mm2_1.setCoords(da1) + mm2_1.insertNextCell(NORM_TRI3,[100,101,102]) + mm2_1.insertNextCell(NORM_TRI3,[103,104,105]) + mm2_1.insertNextCell(NORM_TRI3,[106,107,108]) + mm2_1.insertNextCell(NORM_QUAD4,[109,110,111,112]) + mm2_1.insertNextCell(NORM_QUAD4,[113,114,115,116]) + mm2_1.insertNextCell(NORM_QUAD4,[117,118,119,120]) + mm2_1.insertNextCell(NORM_QUAD4,[121,122,123,124]) + mm2_1.insertNextCell(NORM_QUAD4,[125,126,127,128]) + mm2[-1]=mm2_1 + mm2.setFamilyFieldArr(-1,DataArrayInt([200,201,202,203,204,205,206,207])) + mm2.setRenumFieldArr(-1,DataArrayInt([300,301,302,303,304,305,306,307])) + for i in range(1,12): + mm2.setFamilyId("G%d"%i,i+30) + mm2.setFamilyId("H1",100) + mm2.setFamilyId("FAMILLE_ZERO",0) + mm2.setFamiliesOnGroup("myGRP",["G2","G6"]) + mm2.setFamiliesOnGroup("myGRP2",["G4","G7"]) + mm2.setFamilyFieldArr(1,DataArrayInt([112,113,114,115,116])) + mm2.setRenumFieldArr(1,DataArrayInt([122,123,124,125,126])) + # + mm=MEDFileUMesh.Aggregate([mm1,mm2]) + ####### + def CheckMesh(tester,mm): + cooExp=DataArrayDouble([(1,2,10),(3,4,11),(5,6,12),(7,8,13),(9,10,30),(11,12,31),(13,14,32),(15,16,33),(17,18,34)]) ; cooExp.setInfoOnComponents(["aa [m]","bbb [kg]","cccc [MW]"]) + tester.assertTrue(mm.getCoords().isEqual(cooExp,1e-12)) + tester.assertTrue(mm[0].getNodalConnectivity().isEqual(DataArrayInt([14,0,1,2,3,14,4,5,6,7,14,104,105,106,107,14,108,109,110,111,14,112,113,114,115,16,8,9,10,11,12,13,16,14,15,16,17,18,19,16,20,21,22,23,24,25,16,116,117,118,119,120,121]))) + tester.assertTrue(mm[0].getNodalConnectivityIndex().isEqual(DataArrayInt([0,5,10,15,20,25,32,39,46,53]))) + tester.assertTrue(mm[-1].getNodalConnectivity().isEqual(DataArrayInt([3,0,1,2,3,3,4,5,3,104,105,106,3,107,108,109,3,110,111,112,4,6,7,8,9,4,10,11,12,13,4,14,15,16,17,4,18,19,20,21,4,113,114,115,116,4,117,118,119,120,4,121,122,123,124,4,125,126,127,128,4,129,130,131,132]))) + tester.assertTrue(mm[-1].getNodalConnectivityIndex().isEqual(DataArrayInt([0,4,8,12,16,20,25,30,35,40,45,50,55,60,65]))) + tester.assertTrue(mm.getFamilyFieldAtLevel(0).isEqual(DataArrayInt([1,2,40,41,42,3,4,5,43]))) + tester.assertTrue(mm.getNumberFieldAtLevel(0).isEqual(DataArrayInt([11,12,50,51,52,13,14,15,53]))) + tester.assertTrue(mm.getFamilyFieldAtLevel(-1).isEqual(DataArrayInt([6,7,200,201,202,8,9,10,11,203,204,205,206,207]))) + tester.assertTrue(mm.getNumberFieldAtLevel(-1).isEqual(DataArrayInt([16,17,300,301,302,18,19,20,21,303,304,305,306,307]))) + refFamIds=[("FAMILLE_ZERO",0),('F1',1),('F2',2),('F3',3),('F4',4),('F5',5),('F6',6),('F7',7),('F8',8),('F9',9),('G1',31),('G10',40),('G11',41),('G2',32),('G3',33),('G4',34),('G5',35),('G6',36),('G7',37),('G8',38),('G9',39),("H1",100)] + tester.assertEqual(set(mm.getFamiliesNames()),set([elt[0] for elt in refFamIds])) + tester.assertEqual(set([mm.getFamilyId(elt) for elt in mm.getFamiliesNames()]),set([elt[1] for elt in refFamIds])) + tester.assertEqual(mm.getGroupsNames(),('myGRP','myGRP1','myGRP2')) + tester.assertEqual(mm.getAllDistributionOfTypes(),[(NORM_TRI3,5),(NORM_QUAD4,9),(NORM_TETRA4,5),(NORM_PENTA6,4),(NORM_ERROR,9)]) + pass + CheckMesh(self,mm) + ## + fieldName="zeField" + t1=(2.3,3,5) + t2=(5.6,7,12) + infoc=["dd [W]","eee [kA]"] + ## + fmts1=MEDFileFieldMultiTS() + f1ts1=MEDFileField1TS() + f1_1=MEDCouplingFieldDouble(ON_CELLS) ; f1_1.setMesh(mm1[0]) ; f1_1.setName(fieldName) + arr1=DataArrayDouble([(10,110),(11,111),(12,112),(13,113),(14,114)]) + arr1.setInfoOnComponents(infoc) + f1_1.setArray(arr1) ; f1_1.setTime(*t1) ; f1_1.setTimeUnit("ms") + f1_1.checkConsistencyLight() + f1ts1.setFieldNoProfileSBT(f1_1) + # + f1_2=MEDCouplingFieldDouble(ON_CELLS) ; f1_2.setMesh(mm1[-1]) ; f1_2.setName(fieldName) + arr2=DataArrayDouble([(15,115),(16,116),(17,117),(18,118),(19,119),(20,120)]) + arr2.setInfoOnComponents(infoc) + f1_2.setArray(arr2) ; f1_2.setTime(*t1) ; f1_2.setTimeUnit("ms") + f1_2.checkConsistencyLight() + f1ts1.setFieldNoProfileSBT(f1_2) + f1_3=MEDCouplingFieldDouble(ON_NODES) ; f1_3.setMesh(mm1[0]) ; f1_3.setName(fieldName) + arr3=DataArrayDouble([(21,121),(22,122),(23,123),(24,124)]) + arr3.setInfoOnComponents(infoc) + f1_3.setArray(arr3) ; f1_3.setTime(*t1) ; f1_3.setTimeUnit("ms") + f1_3.checkConsistencyLight() + f1ts1.setFieldNoProfileSBT(f1_3) + fmts1.pushBackTimeStep(f1ts1) + # + f1ts2=f1ts1.deepCopy() + f1ts2.setTime(t2[1],t2[2],t2[0]) + f1ts2.getUndergroundDataArray()[:]+=2000 + fmts1.pushBackTimeStep(f1ts2) + ### fmts2 + fmts2=MEDFileFieldMultiTS() + f1ts3=MEDFileField1TS() + f2_1=MEDCouplingFieldDouble(ON_CELLS) ; f2_1.setMesh(mm2[0]) ; f2_1.setName(fieldName) + arr4=DataArrayDouble([(50,150),(51,151),(52,152),(53,153)]) + arr4.setInfoOnComponents(infoc) + f2_1.setArray(arr4) ; f2_1.setTime(*t1) ; f2_1.setTimeUnit("ms") + f2_1.checkConsistencyLight() + f1ts3.setFieldNoProfileSBT(f2_1) + f2_2=MEDCouplingFieldDouble(ON_CELLS) ; f2_2.setMesh(mm2[-1]) ; f2_2.setName(fieldName) + arr5=DataArrayDouble([(54,154),(55,155),(56,156),(57,157),(158,158),(59,159),(60,160),(61,161)]) + arr5.setInfoOnComponents(infoc) + f2_2.setArray(arr5) ; f2_2.setTime(*t1) ; f2_2.setTimeUnit("ms") + f2_2.checkConsistencyLight() + f1ts3.setFieldNoProfileSBT(f2_2) + f2_3=MEDCouplingFieldDouble(ON_NODES) ; f2_3.setMesh(mm2[0]) ; f2_3.setName(fieldName) + arr6=DataArrayDouble([(62,162),(63,163),(64,164),(65,165),(66,166)]) + arr6.setInfoOnComponents(infoc) + f2_3.setArray(arr6) ; f2_3.setTime(*t1) ; f2_3.setTimeUnit("ms") + f2_3.checkConsistencyLight() + f1ts3.setFieldNoProfileSBT(f2_3) + fmts2.pushBackTimeStep(f1ts3) + # + f1ts4=f1ts3.deepCopy() + f1ts4.setTime(t2[1],t2[2],t2[0]) + f1ts4.getUndergroundDataArray()[:]+=2000 + fmts2.pushBackTimeStep(f1ts4) + # + mfd1=MEDFileData() + mfd1.setMeshes(MEDFileMeshes()) + mfd1.getMeshes().pushMesh(mm1) + mfd1.setFields(MEDFileFields()) + mfd1.getFields().pushField(fmts1) + # + mfd2=MEDFileData() + mfd2.setMeshes(MEDFileMeshes()) + mfd2.getMeshes().pushMesh(mm2) + mfd2.setFields(MEDFileFields()) + mfd2.getFields().pushField(fmts2) + # ze Call ! + mfd=MEDFileData.Aggregate([mfd1,mfd2]) + def CheckMFD(tester,mfd): + tester.assertEqual(len(mfd.getMeshes()),1) + tester.assertEqual(len(mfd.getFields()),1) + CheckMesh(self,mfd.getMeshes()[0]) + tester.assertEqual(len(mfd.getFields()[0]),2) + zeF1=mfd.getFields()[0][0] + zeF1_1=zeF1.getFieldOnMeshAtLevel(ON_CELLS,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_1,f2_1]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + tester.assertTrue(ref.isEqual(zeF1_1,1e-12,1e-12)) + zeF1_2=zeF1.getFieldOnMeshAtLevel(ON_CELLS,-1,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_2,f2_2]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + tester.assertTrue(ref.isEqual(zeF1_2,1e-12,1e-12)) + zeF1_3=zeF1.getFieldOnMeshAtLevel(ON_NODES,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_3,f2_3]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + tester.assertTrue(ref.isEqual(zeF1_3,1e-12,1e-12)) + # + zeF2=mfd.getFields()[0][1] + zeF2_1=zeF2.getFieldOnMeshAtLevel(ON_CELLS,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_1,f2_1]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + ref.setTime(*t2) ; ref.getArray()[:]+=2000 + tester.assertTrue(ref.isEqual(zeF2_1,1e-12,1e-12)) + zeF2_2=zeF2.getFieldOnMeshAtLevel(ON_CELLS,-1,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_2,f2_2]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + ref.setTime(*t2) ; ref.getArray()[:]+=2000 + tester.assertTrue(ref.isEqual(zeF2_2,1e-12,1e-12)) + zeF2_3=zeF2.getFieldOnMeshAtLevel(ON_NODES,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_3,f2_3]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + ref.setTime(*t2) ; ref.getArray()[:]+=2000 + tester.assertTrue(ref.isEqual(zeF2_3,1e-12,1e-12)) + CheckMFD(self,mfd) + mfd1.write(fname1,2) ; mfd2.write(fname2,2) + mfd=MEDFileData.Aggregate([MEDFileData(fname1),MEDFileData(fname2)]) + CheckMFD(self,mfd) + pass + + def testExtrudedMesh1(self): + fname="Pyfile107.med" + arrX=DataArrayDouble([0,1,2,3]) ; arrY=DataArrayDouble([0,1,2,3,4]) ; arrZ=DataArrayDouble([0,1,2,3,4,5]) + mesh3D=MEDCouplingCMesh() ; mesh3D.setCoords(arrX,arrY,arrZ) ; mesh3D.setName("mesh") + ex=MEDCouplingMappedExtrudedMesh(mesh3D) + mm=MEDFileUMesh(ex) + mm.write(fname,2) + ex2=mm.convertToExtrudedMesh() + mm2=MEDFileMesh.New(fname) + ex3=mm2.convertToExtrudedMesh() + self.assertTrue(ex.isEqual(ex2,1e-12)) + self.assertTrue(ex.isEqual(ex3,1e-12)) + pass + + @unittest.skipUnless(LooseVersion(MEDFileVersionStr())>=LooseVersion('3.2.1'),"This test requires at least MEDFile version 3.2.1") + @unittest.skipUnless(LooseVersion(MEDFileVersionStr()) serialization of MEDFileData + st=pickle.dumps(mfd,pickle.HIGHEST_PROTOCOL) + mfd3=pickle.loads(st) + # check of object + self.assertEqual(len(mfd3.getMeshes()),1) + self.assertEqual(len(mfd3.getFields()),1) + self.assertEqual(len(mfd3.getFields()[0]),1) + self.assertTrue(mfd3.getMeshes()[0].isEqual(mfd.getMeshes()[0],1e-12)) + ff3=mfd3.getFields()[0][0].field(mfd3.getMeshes()[0]) + self.assertTrue(ff3.isEqual(ff,1e-12,1e-12)) + # serialization of MEDFileFields + st=pickle.dumps(mfd.getFields(),pickle.HIGHEST_PROTOCOL) + fs4=pickle.loads(st) + ff4=fs4[0][0].field(mfd3.getMeshes()[0]) + self.assertTrue(ff4.isEqual(ff,1e-12,1e-12)) + # serialization of MEDFileFieldMulitTS + st=pickle.dumps(mfd.getFields()[0],pickle.HIGHEST_PROTOCOL) + fmts5=pickle.loads(st) + ff5=fmts5[0].field(mfd3.getMeshes()[0]) + self.assertTrue(ff5.isEqual(ff,1e-12,1e-12)) + # serialization of MEDFileField1TS + st=pickle.dumps(mfd.getFields()[0][0],pickle.HIGHEST_PROTOCOL) + f1ts6=pickle.loads(st) + ff6=f1ts6.field(mfd3.getMeshes()[0]) + self.assertTrue(ff6.isEqual(ff,1e-12,1e-12)) + # serialization of MEDFileMeshes + st=pickle.dumps(mfd.getMeshes(),pickle.HIGHEST_PROTOCOL) + ms7=pickle.loads(st) + self.assertEqual(len(ms7),1) + self.assertTrue(ms7[0].isEqual(mfd.getMeshes()[0],1e-12)) + pass + + @unittest.skipUnless(MEDCouplingHasNumPyBindings(),"requires numpy") + def testPickelizationOfMEDFileObjects2(self): + # CMesh + self.testMEDMesh6() # generates MEDFileMesh5.med file + mm=MEDFileMesh.New("MEDFileMesh5.med") + self.assertTrue(isinstance(mm,MEDFileCMesh)) + st=pickle.dumps(mm,pickle.HIGHEST_PROTOCOL) + mm2=pickle.loads(st) + self.assertTrue(isinstance(mm2,MEDFileCMesh)) + self.assertTrue(mm.getMesh().isEqual(mm2.getMesh(),1e-12)) + # CurveLinear + self.testCurveLinearMesh1() # generates Pyfile55.med + mm=MEDFileMesh.New("Pyfile55.med") + self.assertTrue(isinstance(mm,MEDFileCurveLinearMesh)) + st=pickle.dumps(mm,pickle.HIGHEST_PROTOCOL) + mm3=pickle.loads(st) + self.assertTrue(isinstance(mm3,MEDFileCurveLinearMesh)) + self.assertTrue(mm.getMesh().isEqual(mm3.getMesh(),1e-12)) + self.testInt32InMEDFileFieldStar1()# generates Pyfile63.med + # MEDFileIntFieldMultiTS + fs4=MEDFileFields("Pyfile63.med") + ms4=MEDFileMeshes("Pyfile63.med") + self.assertTrue(isinstance(fs4[0],MEDFileIntFieldMultiTS)) + st=pickle.dumps(fs4[0],pickle.HIGHEST_PROTOCOL) + fmts5=pickle.loads(st) + self.assertEqual(len(fs4[0]),len(fmts5)) + self.assertTrue(isinstance(fmts5,MEDFileIntFieldMultiTS)) + self.assertTrue(fmts5[0].field(ms4[0]).isEqual((fs4[0][0]).field(ms4[0]),1e-12,0)) + # MEDFileIntField1TS + st=pickle.dumps(fs4[0][0],pickle.HIGHEST_PROTOCOL) + f1ts6=pickle.loads(st) + self.assertTrue(isinstance(f1ts6,MEDFileIntField1TS)) + self.assertTrue(f1ts6.field(ms4[0]).isEqual((fs4[0][0]).field(ms4[0]),1e-12,0)) + # MEDFileParameters + self.testParameters1()# generates Pyfile56.med + params=MEDFileParameters("Pyfile56.med") + st=pickle.dumps(params,pickle.HIGHEST_PROTOCOL) + params7=pickle.loads(st) + self.assertEqual(len(params),len(params7)) + for i in range(len(params)): + self.assertTrue(params[i].isEqual(params7[i],1e-12)[0]) + pass + pass + + def testGlobalNumOnNodes1(self): + """Test global number on nodes here. Used by partitionners.""" + fname="Pyfile112.med" + arr=DataArrayDouble(5) ; arr.iota() + m=MEDCouplingUMesh.Build1DMeshFromCoords(arr) + m.setName("mesh") + mm=MEDFileUMesh() + mm[0]=m + self.assertTrue(not mm.getGlobalNumFieldAtLevel(1)) + d=DataArrayInt([7,8,9,2,0]) + dRef=d.deepCopy() + mm.setGlobalNumFieldAtLevel(1,d) + mm.checkConsistency() + self.assertRaises(InterpKernelException,mm.setGlobalNumFieldAtLevel,1,d[::2]) + mm.checkConsistency() + self.assertEqual(d.getHiddenCppPointer(),mm.getGlobalNumFieldAtLevel(1).getHiddenCppPointer()) + self.assertTrue(mm.getGlobalNumFieldAtLevel(1).isEqual(dRef)) + mm.write(fname,2) + mm2=MEDFileMesh.New(fname) + self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + self.assertTrue(mm2.getGlobalNumFieldAtLevel(1).isEqual(dRef)) + mm2.getGlobalNumFieldAtLevel(1).setIJ(0,0,10) + self.assertTrue(not mm.isEqual(mm2,1e-12)[0]) + mm2.getGlobalNumFieldAtLevel(1).setIJ(0,0,7) + self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + pass + + def testPartialReadOfEntities1(self): + """Test for advanced API on read to speed up read phase for users with "huge" number of time steps (more than 10 000).""" + fname="Pyfile113.med" + arr=DataArrayDouble(5) ; arr.iota() + m=MEDCouplingUMesh.Build1DMeshFromCoords(arr) + m.setName("mesh") + mm=MEDFileUMesh() + mm[0]=m + # + fieldName="Field" + ts1=(5.,1,2) + f1=MEDCouplingFieldDouble(ON_NODES) ; f1.setMesh(m) ; f1.setName(fieldName) + f1.setArray(DataArrayDouble([0.,0.1,0.2,0.3,0.4])) + f1.setTime(*ts1) + f2=MEDCouplingFieldDouble(ON_CELLS) ; f2.setMesh(m) ; f2.setName(fieldName) + f2.setArray(DataArrayDouble([1.,1.1,1.2,1.3])) + f2.setTime(*ts1) + f1ts=MEDFileField1TS() + f1ts.setFieldNoProfileSBT(f1) + f1ts.setFieldNoProfileSBT(f2) + self.assertEqual(set(f1ts.getTypesOfFieldAvailable()),set([ON_NODES,ON_CELLS])) + f1ts_2=f1ts.deepCopy() + f1ts_2.getUndergroundDataArray()[:]+=2 + f1ts_2.setTime(3,4,6.) + fmts=MEDFileFieldMultiTS() + fmts.pushBackTimeStep(f1ts) + fmts.pushBackTimeStep(f1ts_2) + # + mm.write(fname,2) + fmts.write(fname,0) + # + ent=MEDFileEntities.BuildFrom([(ON_NODES,NORM_ERROR)]) + mm=MEDFileMesh.New(fname) + fs=MEDFileFields(fname,False,ent) # the important line is here - We specify to MEDFileFields to read only nodes part to speed up read phase (by avoiding to scan all entities time geo types) + fs.loadArrays() + self.assertEqual(len(fs),1) + fmts=fs[0] + self.assertEqual(len(fmts),2) + ff0=fmts[0] ; ff1=fmts[1] + self.assertEqual(ff0.getTypesOfFieldAvailable(),[ON_NODES]) # only NODES have been loaded + self.assertTrue(ff0.field(mm).isEqual(f1,1e-12,1e-12)) + f3=f1.deepCopy() ; f3+=2. ; f3.setTime(6.,3,4) + self.assertTrue(ff1.field(mm).isEqual(f3,1e-12,1e-12)) + pass + + def testFloat32InMEDFileFieldStar1(self): + """Like testInt32InMEDFileFieldStar1 but with float32 :)""" + fname="Pyfile114.med" + f1=MEDLoaderDataForTest.buildVecFieldOnCells_1(); + f1=f1.convertToFloatField() + m1=f1.getMesh() + mm1=MEDFileUMesh.New() + mm1.setCoords(m1.getCoords()) + mm1.setMeshAtLevel(0,m1) + mm1.setName(m1.getName()) + mm1.write(fname,2) + ff1=MEDFileFloatField1TS() + ff1.setFieldNoProfileSBT(f1) + a=ff1.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) + self.assertEqual(a.getArray().getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) + self.assertTrue(a.isEqual(f1,1e-12,1e-12)) + ff1.write(fname,0) + a,b=ff1.getUndergroundDataArrayExt() + self.assertEqual(a.getHiddenCppPointer(),ff1.getUndergroundDataArray().getHiddenCppPointer()) + self.assertEqual(b,[((3,0),(0,2)),((4,0),(2,4)),((6,0),(4,5)),((5,0),(5,6))]) + ff2=MEDFileAnyTypeField1TS.New(fname) + self.assertEqual(ff2.getName(),"VectorFieldOnCells") + self.assertEqual(ff2.getTime(),[0,1,2.0]) + self.assertTrue(isinstance(ff2,MEDFileFloatField1TS)) + a=ff1.getFieldOnMeshAtLevel(ON_CELLS,0,mm1) + self.assertEqual(a.getArray().getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) + self.assertTrue(a.isEqual(f1,1e-12,1e-12)) + ff2.setTime(1,2,3.) + c=ff2.getUndergroundDataArray() ; c*=2 + ff2.write(fname,0) # 2 time steps in + ffs1=MEDFileAnyTypeFieldMultiTS.New(fname,"VectorFieldOnCells") + self.assertEqual(ffs1.getTimeSteps(),[(0, 1, 2.0), (1, 2, 3.0)]) + self.assertEqual(len(ffs1),2) + self.assertTrue(isinstance(ffs1,MEDFileFloatFieldMultiTS)) + a=ffs1[2.].getFieldOnMeshAtLevel(ON_CELLS,0,mm1) + self.assertTrue(a.isEqual(f1,1e-12,1e-12)) + a=ffs1.getFieldOnMeshAtLevel(ON_CELLS,0,1,0,mm1) + self.assertTrue(a.isEqual(f1,1e-12,1e-12)) + it=ffs1.__iter__() ; it.next() ; ff2bis=it.next() + a=ff2bis.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) + self.assertTrue(a.getArray().isEqual(2*f1.getArray(),1e-7)) + f1.setTime(3.,1,2) ; f1.getArray()[:]*=2 + self.assertTrue(a.isEqual(f1,1e-12,1e-12)) ; f1.getArray()[:]/=2 + bc=DataArrayFloat(6,3) ; bc[:]=0 ; bc.setInfoOnComponents(['power [MW/m^3]','density [g/cm^3]','temperature [K]']) + for it in ffs1: + a=it.getFieldOnMeshAtLevel(ON_CELLS,0,mm1) + bc+=a.getArray() + pass + self.assertTrue(bc.isEqual(3*f1.getArray(),1e-7)) + nf1=MEDCouplingFieldFloat(ON_NODES) + nf1.setTime(9.,10,-1) + nf1.setMesh(f1.getMesh()) + narr=DataArrayFloat(12,2) ; narr.setInfoOnComponents(["aa [u1]","bbbvv [ppp]"]) ; narr[:,0]=list(range(12)) ; narr[:,1]=2*narr[:,0] + nf1.setName("VectorFieldOnNodes") ; nf1.setArray(narr) + nff1=MEDFileFloatField1TS.New() + nff1.setFieldNoProfileSBT(nf1) + self.assertEqual(nff1.getInfo(),('aa [u1]','bbbvv [ppp]')) + self.assertEqual(nff1.getTime(),[10,-1,9.0]) + nff1.write(fname,0) + # + nf2=MEDCouplingFieldFloat(ON_NODES) + nf2.setTime(19.,20,-11) + nf2.setMesh(f1.getMesh()) + narr2=DataArrayFloat(8,2) ; narr.setInfoOnComponents(["aapfl [u1]","bbbvvpfl [ppp]"]) ; narr2[:,0]=list(range(8)) ; narr2[:,0]+=10 ; narr2[:,1]=3*narr2[:,0] + nf2.setName("VectorFieldOnNodesPfl") ; narr2.setName(nf2.getName()) ; nf2.setArray(narr2) + nff2=MEDFileFloatField1TS.New() + npfl=DataArrayInt([1,2,4,5,6,7,10,11]) ; npfl.setName("npfl") + nff2.setFieldProfile(nf2,mm1,0,npfl) + nff2.getFieldWithProfile(ON_NODES,0,mm1) + a,b=nff2.getFieldWithProfile(ON_NODES,0,mm1) ; b.setName(npfl.getName()) + self.assertTrue(b.isEqual(npfl)) + self.assertTrue(a.isEqual(narr2,1e-7)) + nff2.write(fname,0) + nff2bis=MEDFileFloatField1TS(fname,"VectorFieldOnNodesPfl") + a,b=nff2bis.getFieldWithProfile(ON_NODES,0,mm1) ; b.setName(npfl.getName()) + self.assertTrue(b.isEqual(npfl)) + self.assertTrue(a.isEqual(narr2,1e-7)) + # + nf3=MEDCouplingFieldDouble(ON_NODES) + nf3.setName("VectorFieldOnNodesDouble") + nf3.setTime(29.,30,-21) + nf3.setMesh(f1.getMesh()) + nf3.setArray(f1.getMesh().getCoords()) + nff3=MEDFileField1TS.New() + nff3.setFieldNoProfileSBT(nf3) + nff3.write(fname,0) + fs=MEDFileFields(fname) + self.assertEqual(len(fs),4) + ffs=[it for it in fs] + self.assertTrue(isinstance(ffs[0],MEDFileFloatFieldMultiTS)) + self.assertTrue(isinstance(ffs[1],MEDFileFloatFieldMultiTS)) + self.assertTrue(isinstance(ffs[2],MEDFileFieldMultiTS)) + self.assertTrue(isinstance(ffs[3],MEDFileFloatFieldMultiTS)) + # + self.assertTrue(fs["VectorFieldOnCells"][0].getUndergroundDataArray().isEqualWithoutConsideringStr(f1.getArray(),1e-7)) + self.assertTrue(fs["VectorFieldOnCells"][1,2].getUndergroundDataArray().isEqualWithoutConsideringStr(2*f1.getArray(),1e-7)) + self.assertTrue(fs["VectorFieldOnNodesPfl"][0].getUndergroundDataArray().isEqualWithoutConsideringStr(narr2,1e-7)) + self.assertTrue(fs["VectorFieldOnNodes"][9.].getUndergroundDataArray().isEqualWithoutConsideringStr(narr,1e-7)) + self.assertTrue(fs["VectorFieldOnNodesDouble"][29.].getUndergroundDataArray().isEqualWithoutConsideringStr(f1.getMesh().getCoords(),1e-12)) + # + nf3_read=MEDFileFieldMultiTS(fname,"VectorFieldOnNodesDouble") + self.assertTrue(nf3_read[29.].getUndergroundDataArray().isEqualWithoutConsideringStr(f1.getMesh().getCoords(),1e-12)) + self.assertRaises(InterpKernelException,MEDFileFloatFieldMultiTS.New,fname,"VectorFieldOnNodesDouble")# exception because trying to read a double field with int instance + self.assertRaises(InterpKernelException,MEDFileFieldMultiTS.New,fname,"VectorFieldOnNodes")# exception because trying to read a int field with double instance + MEDFileField1TS.New(fname,"VectorFieldOnNodesDouble",30,-21) + self.assertRaises(InterpKernelException,MEDFileFloatField1TS.New,fname,"VectorFieldOnNodesDouble",30,-21)# exception because trying to read a double field with int instance + MEDFileFloatField1TS.New(fname,"VectorFieldOnNodes",10,-1) + self.assertRaises(InterpKernelException,MEDFileField1TS.New,fname,"VectorFieldOnNodes",10,-1)# exception because trying to read a double field with int instance + # + self.assertEqual(fs.getMeshesNames(),('3DSurfMesh_1','3DSurfMesh_1','3DSurfMesh_1','3DSurfMesh_1')) + self.assertTrue(fs.changeMeshNames([('3DSurfMesh_1','3DSurfMesh')])) + self.assertEqual(fs.getMeshesNames(),('3DSurfMesh','3DSurfMesh','3DSurfMesh','3DSurfMesh')) + self.assertTrue(not fs.changeMeshNames([('3DSurfMesh_1','3DSurfMesh')])) + pass + + def testPenta18_1(self): + """EDF8478 : Test of read/write of penta18""" + fname="Pyfile115.med" + arr=DataArrayDouble([ + (0.,1.,1.),(0.,0.,1.),(1.,0.,1.), + (0.,1.,0.),(0.,0.,0.),(1.,0.,0.), + (0.,0.5,1.),(0.5,0.,1.),(0.5,0.5,1.), + (0.,0.5,0.),(0.5,0.,0.),(0.5,0.5,0.), + (0.,1.,0.5),(0.,0.,0.5),(1.,0.,0.5), + (0.,0.5,0.5),(0.5,0.,0.5),(0.5,0.5,0.5)]) + m=MEDCouplingUMesh("mesh",3) + m.setCoords(arr) + m.allocateCells(1) + m.insertNextCell(NORM_PENTA18,list(range(18))) + m.checkConsistencyLight() + # + f=MEDCouplingFieldDouble(ON_NODES) + f.setMesh(m) + f.setName("FieldOnPenta18") + f.setArray(DataArrayDouble(list(range(18)))) + f.checkConsistencyLight() + # + m2,d,di,rd,rdi=m.buildDescendingConnectivity() + # + f2=MEDCouplingFieldDouble(ON_NODES) + f2.setMesh(m) + f2.setName("FieldOnPenta18Sub") + f2.setArray(DataArrayDouble(list(range(18)))) + f2.checkConsistencyLight() + WriteField(fname,f2,True) + f3=ReadField(fname) + self.assertTrue(f2.isEqual(f3,1e-12,1e-12)) + self.assertEqual(f3.getMesh().getNumberOfCells(),1) + self.assertEqual(f3.getMesh().getTypeOfCell(0),NORM_PENTA18) + pass + + @unittest.skipUnless('linux'==platform.system().lower(),"stderr redirection not ported on Windows ?") + @unittest.skipUnless(LooseVersion(MEDFileVersionStr())