X-Git-Url: http://git.salome-platform.org/gitweb/?a=blobdiff_plain;f=src%2FMEDLoader%2FSwig%2FMEDLoaderTest3.py;h=bd37a82e26a481de2386700c0dbef689d8b30b85;hb=76dbe4d9a44823aca5e7e56b357d64d84db64f66;hp=ec4cf31325e5949012c55491be78d69222de43e2;hpb=b9b0c16b556184daf2b7b2609edd9aaf0426b690;p=tools%2Fmedcoupling.git diff --git a/src/MEDLoader/Swig/MEDLoaderTest3.py b/src/MEDLoader/Swig/MEDLoaderTest3.py index ec4cf3132..bd37a82e2 100644 --- a/src/MEDLoader/Swig/MEDLoaderTest3.py +++ b/src/MEDLoader/Swig/MEDLoaderTest3.py @@ -1,5 +1,5 @@ # -*- coding: iso-8859-1 -*- -# Copyright (C) 2007-2015 CEA/DEN, EDF R&D +# Copyright (C) 2007-2016 CEA/DEN, EDF R&D # # This library is free software; you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public @@ -24,8 +24,9 @@ import unittest import platform from math import pi,e,sqrt from MEDLoaderDataForTest import MEDLoaderDataForTest +from distutils.version import LooseVersion -class MEDLoaderTest(unittest.TestCase): +class MEDLoaderTest3(unittest.TestCase): def testMEDMesh1(self): fileName="Pyfile18.med" mname="ExampleOfMultiDimW" @@ -33,10 +34,10 @@ class MEDLoaderTest(unittest.TestCase): self.assertRaises(InterpKernelException,MEDFileMesh.New,fileName,"") self.assertEqual((0,-1),medmesh.getNonEmptyLevels()) m1_0=medmesh.getLevel0Mesh(True) - m1_1=MEDLoader.ReadUMeshFromFile(fileName,mname,0) + m1_1=ReadUMeshFromFile(fileName,mname,0) self.assertTrue(m1_0.isEqual(m1_1,1e-12)); m2_0=medmesh.getLevelM1Mesh(True) - m2_1=MEDLoader.ReadUMeshFromFile(fileName,mname,-1) + m2_1=ReadUMeshFromFile(fileName,mname,-1) self.assertTrue(m2_0.isEqual(m2_1,1e-12)); pass @@ -47,23 +48,23 @@ class MEDLoaderTest(unittest.TestCase): medmesh=MEDFileUMesh.New(fileName,mname) self.assertEqual((0,),medmesh.getNonEmptyLevels()) m1_0=medmesh.getLevel0Mesh(True) - m1_1=MEDLoader.ReadUMeshFromFile(fileName,mname,0) + m1_1=ReadUMeshFromFile(fileName,mname,0) self.assertTrue(m1_0.isEqual(m1_1,1e-12)); g1_0=medmesh.getGroup(0,"mesh2",True) - g1_1=MEDLoader.ReadUMeshFromGroups(fileName,mname,0,["mesh2"]); + g1_1=ReadUMeshFromGroups(fileName,mname,0,["mesh2"]); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getGroup(0,"mesh3",True) - g1_1=MEDLoader.ReadUMeshFromGroups(fileName,mname,0,["mesh3"]); + g1_1=ReadUMeshFromGroups(fileName,mname,0,["mesh3"]); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getGroups(0,["mesh3","mesh2"]) - g1_1=MEDLoader.ReadUMeshFromGroups(fileName,mname,0,["mesh3","mesh2"]); + g1_1=ReadUMeshFromGroups(fileName,mname,0,["mesh3","mesh2"]); g1_1.setName(g1_0.getName()) self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getFamily(0,"Family_-3",True) - g1_1=MEDLoader.ReadUMeshFromFamilies(fileName,mname,0,["Family_-3"]); + g1_1=ReadUMeshFromFamilies(fileName,mname,0,["Family_-3"]); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getFamilies(0,["Family_-3","Family_-5"],True) - g1_1=MEDLoader.ReadUMeshFromFamilies(fileName,mname,0,["Family_-3","Family_-5"]); + g1_1=ReadUMeshFromFamilies(fileName,mname,0,["Family_-3","Family_-5"]); g1_1.setName(g1_0.getName()) self.assertTrue(g1_0.isEqual(g1_1,1e-12)); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); @@ -99,7 +100,7 @@ class MEDLoaderTest(unittest.TestCase): m.insertNextCell(NORM_POLYGON,4,targetConn[14:18]) m.finishInsertingCells(); m.setCoords(c) - m.checkCoherency() + m.checkConsistencyLight() m1=MEDCouplingUMesh.New(); m1.setMeshDimension(1); m1.allocateCells(3); @@ -108,7 +109,7 @@ class MEDLoaderTest(unittest.TestCase): m1.insertNextCell(NORM_SEG3,3,[2,8,5]) m1.finishInsertingCells(); m1.setCoords(c) - m1.checkCoherency() + m1.checkConsistencyLight() m2=MEDCouplingUMesh.New(); m2.setMeshDimension(0); m2.allocateCells(4); @@ -118,7 +119,7 @@ class MEDLoaderTest(unittest.TestCase): m2.insertNextCell(NORM_POINT1,1,[6]) m2.finishInsertingCells(); m2.setCoords(c) - m2.checkCoherency() + m2.checkConsistencyLight() # mm=MEDFileUMesh.New() self.assertTrue(mm.getUnivNameWrStatus()) @@ -168,7 +169,7 @@ class MEDLoaderTest(unittest.TestCase): t=mm.getGroupArr(0,"GrpOnAllCell") self.assertTrue(t.getValues()==range(5)) # - mmCpy=mm.deepCpy() + mmCpy=mm.deepCopy() self.assertTrue(mm.isEqual(mmCpy,1e-12)[0]) ; del mm mmCpy.write(outFileName,2); # @@ -194,7 +195,7 @@ class MEDLoaderTest(unittest.TestCase): m.setName(mm.getName()) ; m.setDescription(mm.getDescription()) self.assertTrue(m.isEqual(mbis,1e-12)); # - self.assertEqual(([[(3, 2), (4, 1), (5, 8)], [(1, 2), (2, 1)], [(0, 4)]], 2, 2, 9),MEDLoader.GetUMeshGlobalInfo(outFileName,"MyFirstMEDCouplingMEDmesh")) + self.assertEqual(([[(3, 2), (4, 1), (5, 8)], [(1, 2), (2, 1)], [(0, 4)]], 2, 2, 9),GetUMeshGlobalInfo(outFileName,"MyFirstMEDCouplingMEDmesh")) pass # this test is the testMEDMesh3 except that permutation is dealed here @@ -216,7 +217,7 @@ class MEDLoaderTest(unittest.TestCase): m.insertNextCell(NORM_QUAD4,4,targetConn[14:18]) m.finishInsertingCells(); m.setCoords(c) - m.checkCoherency() + m.checkConsistencyLight() m1=MEDCouplingUMesh.New(); m1.setMeshDimension(1); m1.allocateCells(3); @@ -225,7 +226,7 @@ class MEDLoaderTest(unittest.TestCase): m1.insertNextCell(NORM_SEG2,2,[3,6]) m1.finishInsertingCells(); m1.setCoords(c) - m1.checkCoherency() + m1.checkConsistencyLight() m2=MEDCouplingUMesh.New(); m2.setMeshDimension(0); m2.allocateCells(4); @@ -235,7 +236,7 @@ class MEDLoaderTest(unittest.TestCase): m2.insertNextCell(NORM_POINT1,1,[6]) m2.finishInsertingCells(); m2.setCoords(c) - m2.checkCoherency() + m2.checkConsistencyLight() # mm=MEDFileUMesh.New() mm.setName("My2ndMEDCouplingMEDmesh") @@ -439,7 +440,7 @@ class MEDLoaderTest(unittest.TestCase): mm.write("Pyfile19_bis.med",2) ff=MEDFileFieldMultiTS.New("Pyfile19.med") ff.write("Pyfile19_bis.med",0) - self.assertEqual([('tyty','mm'),('uiop','MW')],MEDLoader.GetComponentsNamesOfField("Pyfile19_bis.med","VFieldOnNodes")) + self.assertEqual([('tyty','mm'),('uiop','MW')],GetComponentsNamesOfField("Pyfile19_bis.med","VFieldOnNodes")) pass #gauss points @@ -450,7 +451,7 @@ class MEDLoaderTest(unittest.TestCase): ff.write("Pyfile13_bis.med",0) ff=MEDFileField1TS.New("Pyfile13.med","MyFirstFieldOnGaussPoint",1,5) f=ff.getFieldAtLevel(ON_GAUSS_PT,0) - f2=MEDLoader.ReadFieldGauss("Pyfile13.med",'2DMesh_2',0,'MyFirstFieldOnGaussPoint',1,5) + f2=ReadFieldGauss("Pyfile13.med",'2DMesh_2',0,'MyFirstFieldOnGaussPoint',1,5) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) ff3=MEDFileField1TS.New("Pyfile13.med","MyFirstFieldOnGaussPoint") f3=ff3.getFieldAtLevel(ON_GAUSS_PT,0) @@ -468,7 +469,7 @@ class MEDLoaderTest(unittest.TestCase): ff.write("Pyfile14_bis.med",0) ff=MEDFileField1TS.New("Pyfile14.med","MyFieldOnGaussNE",1,5) f=ff.getFieldAtLevel(ON_GAUSS_NE,0) - f2=MEDLoader.ReadFieldGaussNE("Pyfile14.med",'2DMesh_2',0,"MyFieldOnGaussNE",1,5) + f2=ReadFieldGaussNE("Pyfile14.med",'2DMesh_2',0,"MyFieldOnGaussNE",1,5) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) pass @@ -476,14 +477,14 @@ class MEDLoaderTest(unittest.TestCase): def testMEDField5(self): ff=MEDFileField1TS.New("Pyfile17.med","MeasureOfMesh_Extruded",1,2) f=ff.getFieldAtLevel(ON_CELLS,0) - f2=MEDLoader.ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) + f2=ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) self.assertTrue(f.getMesh().getCoords().isEqual(f2.getMesh().getCoords(),1e-12)) f.getMesh().tryToShareSameCoords(f2.getMesh(),1e-12) f.changeUnderlyingMesh(f2.getMesh(),22,1e-12) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) # no with renumbering f=ff.getFieldAtLevel(ON_CELLS,0,1) - f2=MEDLoader.ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) + f2=ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) f=ff.getFieldAtLevel(ON_CELLS,0,3) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) @@ -499,12 +500,12 @@ class MEDLoaderTest(unittest.TestCase): its=ff.getIterations() self.assertRaises(InterpKernelException,ff.getFieldAtLevel,ON_CELLS,its[0][0],its[0][1],0)# request on cell and it is not on cells f=ff.getFieldAtLevel(ON_NODES,its[0][0],its[0][1],0) - f2=MEDLoader.ReadFieldNode("Pyfile7.med",'3DSurfMesh_1',0,"VectorFieldOnNodes",its[0][0],its[0][1]) + f2=ReadFieldNode("Pyfile7.med",'3DSurfMesh_1',0,"VectorFieldOnNodes",its[0][0],its[0][1]) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) ff=MEDFileFieldMultiTS.New("Pyfile19.med","VFieldOnNodes") its=ff.getIterations() f=ff.getFieldAtLevel(ON_NODES,its[0][0],its[0][1],0) - f2=MEDLoader.ReadFieldNode("Pyfile19.med",'2DMesh_1',0,"VFieldOnNodes",its[0][0],its[0][1]) + f2=ReadFieldNode("Pyfile19.med",'2DMesh_1',0,"VFieldOnNodes",its[0][0],its[0][1]) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) self.assertRaises(InterpKernelException,ff.getFieldAtLevel,ON_CELLS,its[0][0],its[0][1],0)# request on cell and it is not on cells self.assertRaises(InterpKernelException,ff.getFieldAtLevel,ON_NODES,its[0][0],its[0][1],0,1)#request renumber following mesh : it is on profile ! @@ -515,7 +516,7 @@ class MEDLoaderTest(unittest.TestCase): ff=MEDFileFieldMultiTS.New("Pyfile12.med","VectorFieldOnCells") its=ff.getIterations() f=ff.getFieldAtLevel(ON_CELLS,its[0][0],its[0][1],0) - f2=MEDLoader.ReadFieldCell("Pyfile12.med",'3DMesh_1',0,"VectorFieldOnCells",its[0][0],its[0][1]) + f2=ReadFieldCell("Pyfile12.med",'3DMesh_1',0,"VectorFieldOnCells",its[0][0],its[0][1]) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) pass @@ -532,7 +533,7 @@ class MEDLoaderTest(unittest.TestCase): ff1=MEDFileField1TS.New() ff1.setFieldNoProfileSBT(f1) ff1.write(fname,0) - f2=MEDLoader.ReadFieldCell(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]); + f2=ReadFieldCell(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]); itt,orr,ti=ff1.getTime() self.assertEqual(0,itt); self.assertEqual(1,orr); self.assertAlmostEqual(2.,ti,14); self.assertTrue(f1.isEqual(f2,1e-12,1e-12)) @@ -557,7 +558,7 @@ class MEDLoaderTest(unittest.TestCase): nv=1456. da=ff1.getUndergroundDataArray().setIJ(0,0,nv) ff1.write(fname,0) - f2=MEDLoader.ReadFieldNode(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) + f2=ReadFieldNode(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) self.assertTrue(not f1.isEqual(f2,1e-12,1e-12)) f1.getArray().setIJ(0,0,nv) self.assertTrue(f1.isEqual(f2,1e-12,1e-12)) @@ -573,7 +574,7 @@ class MEDLoaderTest(unittest.TestCase): ff1=MEDFileField1TS.New() ff1.setFieldNoProfileSBT(f1) ff1.write(fname,0) - f2=MEDLoader.ReadFieldGaussNE(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) + f2=ReadFieldGaussNE(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) self.assertTrue(f1.isEqual(f2,1e-12,1e-12)) da,infos=ff1.getUndergroundDataArrayExt() f2.getArray().setName(da.getName())#da has the same name than f2 @@ -582,9 +583,9 @@ class MEDLoaderTest(unittest.TestCase): # fname="Pyfile28.med" f1=MEDLoaderDataForTest.buildVecFieldOnGauss_2_Simpler(); - f1InvalidCpy=f1.deepCpy() + f1InvalidCpy=f1.deepCopy() f1InvalidCpy.setDiscretization(MEDCouplingFieldDiscretizationGauss()) - f1InvalidCpy2=f1.deepCpy() + f1InvalidCpy2=f1.deepCopy() f1InvalidCpy2.setDiscretization(MEDCouplingFieldDiscretizationGauss()) m1=f1.getMesh() mm1=MEDFileUMesh.New() @@ -644,7 +645,7 @@ class MEDLoaderTest(unittest.TestCase): f21=m2.getMeasureField(True) ; f21.setName("f21") ; f21=f21.buildNewTimeReprFromThis(ONE_TIME,False) f21.getArray().setInfoOnComponent(0,"sta [mm]") ; ff21.appendFieldNoProfileSBT(f21) - f22=f21.deepCpy() ; f22.setName("f22") ; f22=f22.buildNewTimeReprFromThis(ONE_TIME,False) ; + f22=f21.deepCopy() ; f22.setName("f22") ; f22=f22.buildNewTimeReprFromThis(ONE_TIME,False) ; f22.applyFunc(2,"3*x*IVec+2*x*JVec") f22.getArray().setInfoOnComponent(0,"distance [km]") ; f22.getArray().setInfoOnComponent(1,"displacement [cm]") ff22.appendFieldNoProfileSBT(f22) @@ -687,7 +688,7 @@ class MEDLoaderTest(unittest.TestCase): # ff1.setFieldProfile(f1,mm1,0,da) ff1.changePflsNames([(["sup1_NORM_QUAD4"],"ForV650")]) - ff1=ff1.deepCpy() + ff1=ff1.deepCopy() ff1.write(fname,0) # vals,pfl=ff1.getFieldWithProfile(ON_CELLS,0,mm1) ; vals.setName("") @@ -727,7 +728,7 @@ class MEDLoaderTest(unittest.TestCase): ff1.appendFieldProfile(f1,mm1,0,da) f1.setTime(1.2,1,2) ; e=d.applyFunc("2*x") ; e.copyStringInfoFrom(d) ; f1.setArray(e) ; ff1.appendFieldProfile(f1,mm1,0,da) - ff1=ff1.deepCpy() + ff1=ff1.deepCopy() ff1.write(fname,0) # vals,pfl=ff1.getFieldWithProfile(ON_CELLS,1,2,0,mm1) ; vals.setName("") @@ -891,8 +892,7 @@ class MEDLoaderTest(unittest.TestCase): ff1.write(fname,0) f1=ff1.getFieldOnMeshAtLevel(ON_GAUSS_NE,m1,0) f2,p1=ff1.getFieldWithProfile(ON_GAUSS_NE,0,mm1) ; f2.setName("") - self.assertTrue(p1.isIdentity()) - self.assertEqual(5,p1.getNumberOfTuples()) + self.assertTrue(p1.isIota(5)) self.assertTrue(f1.getArray().isEqual(f2,1e-12)) pass # Test for getFieldAtTopLevel method @@ -961,7 +961,7 @@ class MEDLoaderTest(unittest.TestCase): ff1.appendFieldProfile(f1,mm1,0,da) ffs.resize(1) ffs.setFieldAtPos(0,ff1) - ffs=ffs.deepCpy() + ffs=ffs.deepCopy() ffs.write(fname,0) # ffsr=MEDFileFields.New(fname) @@ -1057,7 +1057,7 @@ class MEDLoaderTest(unittest.TestCase): ff1.setFieldNoProfileSBT(f1) ff1.write(fname,0) # writing mesh1 and field1, now creation of mesh2 and field2 - f2=f1.deepCpy() + f2=f1.deepCopy() m2=f2.getMesh() m2.translate([0.5,0.6,0.7]) m2.setName("3DSurfMesh_2") @@ -1071,9 +1071,9 @@ class MEDLoaderTest(unittest.TestCase): ff2.setFieldNoProfileSBT(f2) ff2.write(fname,0) # - f3=MEDLoader.ReadFieldCell(fname,"3DSurfMesh_1",0,"VectorFieldOnCells",0,1) + f3=ReadFieldCell(fname,"3DSurfMesh_1",0,"VectorFieldOnCells",0,1) self.assertTrue(f3.isEqual(f1,1e-12,1e-12)) - f4=MEDLoader.ReadFieldCell(fname,"3DSurfMesh_2",0,"VectorFieldOnCells2",0,1) + f4=ReadFieldCell(fname,"3DSurfMesh_2",0,"VectorFieldOnCells2",0,1) self.assertTrue(f4.isEqual(f2,1e-12,1e-12)) pass @@ -1095,7 +1095,7 @@ class MEDLoaderTest(unittest.TestCase): da2.iota(7.) da2.rearrange(len(compNames1)) da2.setInfoOnComponents(compNames1) - f2=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f2.setName(FieldName1) ; f2.setArray(da2) ; f2.setMesh(m2) ; f2.checkCoherency() + f2=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f2.setName(FieldName1) ; f2.setArray(da2) ; f2.setMesh(m2) ; f2.checkConsistencyLight() ff1.setFieldNoProfileSBT(f2) self.assertEqual(ff1.getNonEmptyLevels(),(2, [0])) da0=DataArrayDouble.New() @@ -1103,7 +1103,7 @@ class MEDLoaderTest(unittest.TestCase): da0.iota(190.) da0.rearrange(len(compNames1)) da0.setInfoOnComponents(compNames1) - f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName1) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkCoherency() + f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName1) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkConsistencyLight() ff1.setFieldNoProfileSBT(f0) self.assertEqual(ff1.getNonEmptyLevels(),(2, [0,-2])) da1=DataArrayDouble.New() @@ -1111,7 +1111,7 @@ class MEDLoaderTest(unittest.TestCase): da1.iota(90.) da1.rearrange(len(compNames1)) da1.setInfoOnComponents(compNames1) - f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName1) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkCoherency() + f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName1) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkConsistencyLight() ff1.setFieldNoProfileSBT(f1) self.assertEqual(ff1.getNonEmptyLevels(),(2, [0,-1,-2])) # @@ -1125,7 +1125,7 @@ class MEDLoaderTest(unittest.TestCase): da0.iota(-190.) da0.rearrange(2) da0.setInfoOnComponents(compNames2) - f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName2) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkCoherency() + f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName2) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkConsistencyLight() ff2.setFieldNoProfileSBT(f0) self.assertEqual(ff2.getNonEmptyLevels(),(0, [0])) da1=DataArrayDouble.New() @@ -1133,7 +1133,7 @@ class MEDLoaderTest(unittest.TestCase): da1.iota(-90.) da1.rearrange(len(compNames2)) da1.setInfoOnComponents(compNames2) - f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName2) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkCoherency() + f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName2) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkConsistencyLight() ff2.setFieldNoProfileSBT(f1) self.assertEqual(ff2.getNonEmptyLevels(),(1, [0,-1])) # @@ -1374,6 +1374,119 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(delta.getMaxValue()[0]<1e-12) mm.write(fname,2) + def testBuildInnerBoundaryAlongM1Group4(self): + """ Test case where cells touch the M1 group on some nodes only and not on full egdes (triangle mesh for ex) + """ + coo = DataArrayDouble([0.,0., 1.,0., 2.,0., 3.,0., + 0.,1., 1.,1., 2.,1., 3.,1., + 0.,2., 1.,2., 2.,2., 3.,2.], 12, 2) + conn = [3,0,4,1, 3,1,4,5, + 3,5,9,10, 3,5,10,6, + 3,2,6,7, 3,2,7,3, + 3,4,8,9, 3,4,9,5, + 3,1,5,6, 3,1,6,2, + 3,6,10,11,3,6,11,7] + # Only TRI3: + connI = DataArrayInt() + connI.alloc(13, 1); connI.iota(); connI *= 4 + m2 = MEDCouplingUMesh("2D", 2) + m2.setCoords(coo) + m2.setConnectivity(DataArrayInt(conn), connI) + m2.checkConsistency() + m1, _, _, _, _ = m2.buildDescendingConnectivity() + grpIds = DataArrayInt([9,11]); grpIds.setName("group") + grpIds2 = DataArrayInt([0,1]); grpIds2.setName("group2") + mfu = MEDFileUMesh() + mfu.setMeshAtLevel(0, m2) + mfu.setMeshAtLevel(-1, m1) + mfu.setGroupsAtLevel(-1, [grpIds, grpIds2]) + nNod = m2.getNumberOfNodes() + nodesDup, cells1, cells2 = mfu.buildInnerBoundaryAlongM1Group("group") + m2_bis = mfu.getMeshAtLevel(0) + m2_bis.checkConsistency() + m1_bis = mfu.getMeshAtLevel(-1) + m1_bis.checkConsistency() + self.assertEqual(nNod+2, mfu.getNumberOfNodes()) + self.assertEqual(nNod+2, m2_bis.getNumberOfNodes()) + self.assertEqual(nNod+2, m1_bis.getNumberOfNodes()) + self.assertEqual([6,7], nodesDup.getValues()) + self.assertEqual([2.,1., 3.,1.], m2_bis.getCoords()[nNod:].getValues()) + self.assertEqual(set([3,10,11]), set(cells1.getValues())) + self.assertEqual(set([8,9,4,5]), set(cells2.getValues())) + self.assertEqual([9,11],mfu.getGroupArr(-1,"group").getValues()) + self.assertEqual([23,24],mfu.getGroupArr(-1,"group_dup").getValues()) + self.assertEqual([0,1],mfu.getGroupArr(-1,"group2").getValues()) +# mfu.getMeshAtLevel(0).writeVTK("/tmp/mfu_M0.vtu") + ref0 =[3, 5, 10, 12, 3, 12, 10, 11, 3, 12, 11, 13] + ref1 =[3, 2, 6, 7, 3, 2, 7, 3, 3, 1, 5, 6, 3, 1, 6, 2] + self.assertEqual(ref0,mfu.getMeshAtLevel(0)[[3,10,11]].getNodalConnectivity().getValues()) + self.assertEqual(ref1,mfu.getMeshAtLevel(0)[[4,5,8,9]].getNodalConnectivity().getValues()) + self.assertRaises(InterpKernelException,mfu.getGroup(-1,"group_dup").checkGeoEquivalWith,mfu.getGroup(-1,"group"),2,1e-12) # Grp_dup and Grp are not equal considering connectivity only + mfu.getGroup(-1,"group_dup").checkGeoEquivalWith(mfu.getGroup(-1,"group"),12,1e-12)# Grp_dup and Grp are equal considering connectivity and coordinates + m_bis0 = mfu.getMeshAtLevel(-1) + m_desc, _, _, _, _ = m_bis0.buildDescendingConnectivity() + m_bis0.checkDeepEquivalOnSameNodesWith(mfu.getMeshAtLevel(-1), 2, 9.9999999) + + def testBuildInnerBoundary5(self): + """ Full 3D test with tetras only. In this case a tri from the group is not duplicated because it is made only + of non duplicated nodes. The tri in question is hence not part of the final new "dup" group. """ + coo = DataArrayDouble([200.0, 200.0, 0.0, 200.0, 200.0, 200.0, 200.0, 0.0, 200.0, 200.0, 0.0, 0.0, 0.0, 200.0, 0.0, 0.0, 200.0, 200.0, 0.0, 0.0, 0.0, 0.0, 0.0, + 200.0, 400.0, 200.0, 0.0, 400.0, 200.0, 200.0, 400.0, 0.0, 0.0, 400.0, 0.0, 200.0, 0.0, 100.00000000000016, 200.0, 63.15203310314546, 200.0, 200.0, 134.45205700643342, + 200.0, 200.0, 200.0, 100.00000000000016, 200.0, 63.15203310314546, 0.0, 200.0, 134.45205700643342, 0.0, 200.0, 0.0, 100.00000000000016, 0.0, 63.15203310314546, + 200.0, 0.0, 134.45205700643342, 200.0, 0.0, 200.0, 100.00000000000016, 0.0, 63.15203310314546, 0.0, 0.0, 134.45205700643342, 0.0, 0.0, 200.0, 200.0, 100.02130053568538, + 0.0, 200.0, 100.00938163175135, 200.0, 0.0, 100.02130053568538, 0.0, 0.0, 100.00938163175135, 299.3058739933347, 200.0, 200.0, 400.0, 98.68100542924483, + 200.0, 302.8923433403344, 0.0, 200.0, 302.8923433403344, 200.0, 0.0, 400.0, 100.00000000000016, 0.0, 302.8923433403344, 0.0, 0.0, 400.0, 200.0, 98.55126825835082, + 400.0, 0.0, 100.02162286181577, 99.31624553977466, 99.99999998882231, 200.0, 99.31624576683302, 100.00000010178034, 0.0, 99.31624560596512, 200.0, 100.0050761312483, + 99.31624560612883, 0.0, 100.00507613125338, 200.0, 99.99999995813045, 100.00950673487786, 0.0, 99.99999989928207, 100.0041870621175, 301.29063354383015, + 100.0000000093269, 0.0, 301.29063360689975, 0.0, 100.00957769061164, 140.52853868782435, 99.99999963972768, 100.00509135751312, 297.87779091770784, + 97.16750463405486, 97.18018457127863], 46, 3) + c0 = [14, 45, 31, 21, 42, 14, 37, 38, 20, 44, 14, 39, 36, 41, 44, 14, 5, 25, 12, 13, 14, 38, 36, 44, 41, 14, 21, 20, 24, 44, 14, 38, 25, 41, 19, 14, 37, 38, 44, 41, 14, 16, 27, + 39, 41, 14, 21, 45, 26, 40, 14, 39, 37, 44, 41, 14, 14, 15, 24, 44, 14, 25, 38, 41, 13, 14, 27, 18, 6, 22, 14, 38, 36, 41, 13, 14, 44, 14, 15, 36, 14, 44, 23, 39, 26, 14, + 21,26, 23, 44, 14, 38, 44, 14, 24, 14, 39, 37, 41, 22, 14, 21, 33, 45, 42, 14, 27, 22, 39, 41, 14, 23, 26, 21, 3, 14, 27, 18, 22, 41, 14, 39, 36, 44, 17, 14, 21, 26, 44, 40, + 14, 39, 37, 22, 23, 14, 37, 38, 41, 19, 14, 25, 12, 13, 41, 14, 30, 26, 43, 45, 14, 38, 36, 13, 14, 14, 12, 36, 13, 41, 14, 20, 44, 21, 37, 14, 16, 36, 12, 41, 14, 39, 36, + 17, 16, 14, 44, 20, 24, 38, 14, 27, 16, 12, 41, 14, 26, 15, 17, 44, 14, 19, 18, 41, 37, 14, 40, 45, 26, 15, 14, 37, 38, 19, 20, 14, 17, 15, 26, 2, 14, 39, 36, 16, 41, 14, + 24, 21, 44, 40, 14, 16, 7, 27, 12, 14, 22, 18, 37, 41, 14, 21, 31, 45, 24, 14, 44, 40, 15, 24, 14, 24, 45, 15, 28, 14, 44, 40, 26, 15, 14, 24, 20, 21, 0, 14, 38, 36, 14, + 44, 14, 39, 37, 23, 44, 14, 45, 31, 42, 32, 14, 25, 18, 19, 4, 14, 36, 44, 17, 15, 14, 25, 19, 18, 41, 14, 24, 15, 14, 1, 14, 45, 24, 34, 28, 14, 35, 45, 30, 43, 14, 17, + 44, 39, 26, 14, 44, 23, 21, 37, 14, 30, 45, 29, 15, 14, 45, 35, 33, 43, 14, 30, 15, 26, 45, 14, 31, 21, 0, 24, 14, 33, 35, 32, 10, 14, 29, 45, 34, 28, 14, 32, 45, 34, + 29, 14, 45, 31, 32, 34, 14, 33, 26, 45, 43, 14, 45, 31, 34, 24, 14, 33, 26, 21, 45, 14, 11, 30, 35, 29, 14, 33, 35, 45, 32, 14, 33, 45, 42, 32, 14, 32, 8, 34, 31, 14, + 21, 26, 33, 3, 14, 35, 45, 32, 29, 14, 29, 34, 9, 28, 14, 15, 45, 24, 40, 14, 29, 45, 28, 15, 14, 21, 24, 45, 40, 14, 24, 15, 1, 28, 14, 35, 45, 29, 30, 14, 26, 15, + 30, 2] + cI0 = [0, 5, 10, 15, 20, 25, 30, 35, 40, 45, 50, 55, 60, 65, 70, 75, 80, 85, 90, 95, 100, 105, 110, 115, 120, 125, 130, 135, 140, 145, 150, 155, 160, 165, 170, 175, 180, 185, + 190, 195, 200, 205, 210, 215, 220, 225, 230, 235, 240, 245, 250, 255, 260, 265, 270, 275, 280, 285, 290, 295, 300, 305, 310, 315, 320, 325, 330, 335, 340, 345, 350, 355, + 360, 365, 370, 375, 380, 385, 390, 395, 400, 405, 410, 415, 420, 425, 430] + m3 = MEDCouplingUMesh("3D", 3) + m3.setCoords(coo) + m3.setConnectivity(DataArrayInt(c0), DataArrayInt(cI0)) + m3.checkConsistency() + m2, _, _, _, _ = m3.buildDescendingConnectivity() + grpIds = DataArrayInt([36,74]); grpIds.setName("group") + mfu = MEDFileUMesh() + mfu.setMeshAtLevel(0, m3) + mfu.setMeshAtLevel(-1, m2) + grpIds3D = DataArrayInt([0,1]); grpIds3D.setName("group_3d") + mfu.setGroupsAtLevel(0, [grpIds3D]) # just to check preservation of 3D group + mfu.setGroupsAtLevel(-1, [grpIds]) + nNod = m3.getNumberOfNodes() + nodesDup, cells1, cells2 = mfu.buildInnerBoundaryAlongM1Group("group") + m3_bis = mfu.getMeshAtLevel(0) + m3_bis.checkConsistency() + m2_bis = mfu.getMeshAtLevel(-1) + m2_bis.checkConsistency() + self.assertEqual(nNod+1, mfu.getNumberOfNodes()) + self.assertEqual(nNod+1, m3_bis.getNumberOfNodes()) + self.assertEqual(nNod+1, m2_bis.getNumberOfNodes()) + self.assertEqual([3], nodesDup.getValues()) + self.assertEqual(m3_bis.getCoords()[3].getValues(), m3_bis.getCoords()[nNod:].getValues()) + self.assertEqual(set([22]), set(cells1.getValues())) + self.assertEqual(set([77]), set(cells2.getValues())) + self.assertEqual([36,74],mfu.getGroupArr(-1,"group").getValues()) + self.assertEqual([0,1],mfu.getGroupArr(0,"group_3d").getValues()) + self.assertEqual([213],mfu.getGroupArr(-1,"group_dup").getValues()) # here only one cell has been duplicated + m_bis0 = mfu.getMeshAtLevel(-1) + m_desc, _, _, _, _ = m_bis0.buildDescendingConnectivity() + m_bis0.checkDeepEquivalOnSameNodesWith(mfu.getMeshAtLevel(-1), 2, 9.9999999) + pass + def testBasicConstructors(self): fname="Pyfile18.med" m=MEDFileMesh.New(fname) @@ -1434,8 +1547,8 @@ class MEDLoaderTest(unittest.TestCase): fread=ff2.getFieldOnMeshAtLevel(ON_CELLS,0,mm) fread2=ff2.getFieldAtLevel(ON_CELLS,0) # - fread.checkCoherency() - fread2.checkCoherency() + fread.checkConsistencyLight() + fread2.checkConsistencyLight() self.assertTrue(fread.isEqual(f1,1e-12,1e-12)) self.assertTrue(fread2.isEqual(f1,1e-12,1e-12)) pass @@ -1544,7 +1657,7 @@ class MEDLoaderTest(unittest.TestCase): tr=[[0.,4.],[2.,4.],[4.,4.],[6.,4.],[8.,4.],[10.,4.],[12.,4.],[14.,4.],[16.,4.],[18.,4.],[20.,4.],[0.,0.],[2.,0.], [0.,2.],[2.,2.],[4.,2.],[6.,2.],[8.,2.],[10.,2.],[12.,2.]] ms=11*[mT3]+2*[mQ4]+7*[mQ8] - ms[:]=(elt.deepCpy() for elt in ms) + ms[:]=(elt.deepCopy() for elt in ms) for m,t in zip(ms,tr): d=m.getCoords() ; d+= t pass @@ -1559,12 +1672,12 @@ class MEDLoaderTest(unittest.TestCase): da=DataArrayDouble(34) ; da.iota(3.) f.setArray(da) f.setName("fieldCellOnPflWithoutPfl") - fInvalid=f.deepCpy() + fInvalid=f.deepCopy() f.setGaussLocalizationOnCells([0,1,2,3,4,5,6,7,8],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7],[0.8,0.2]) f.setGaussLocalizationOnCells([9,10],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7,0.8,0.8],[0.8,0.07,0.13]) f.setGaussLocalizationOnCells([11,12],[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8,0.8,0.8],[0.8,0.07,0.1,0.01,0.02]) - f.checkCoherency() - fInvalid2=fInvalid.deepCpy() + f.checkConsistencyLight() + fInvalid2=fInvalid.deepCopy() fInvalid2.getDiscretization().setArrayOfDiscIds(f.getDiscretization().getArrayOfDiscIds()) # mm=MEDFileUMesh() @@ -1593,12 +1706,12 @@ class MEDLoaderTest(unittest.TestCase): f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) f2=f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) - f2_bis=MEDLoader.ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) - f2_bis.checkCoherency() + f2_bis=ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + f2_bis.checkConsistencyLight() self.assertTrue(f.isEqual(f2_bis,1e-12,1e-12)) # - MEDLoader.WriteField(fname2,f,True) - f2_ter=MEDLoader.ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + WriteField(fname2,f,True) + f2_ter=ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) self.assertTrue(f.isEqual(f2_ter,1e-12,1e-12)) ## Use case 2 : Pfl on part tri3 with 2 disc and on part quad8 with 1 disc f=MEDCouplingFieldDouble.New(ON_GAUSS_PT,ONE_TIME) @@ -1612,7 +1725,7 @@ class MEDLoaderTest(unittest.TestCase): f.setGaussLocalizationOnCells([0,1,3],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7],[0.8,0.2]) f.setGaussLocalizationOnCells([2,4,5],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7,0.8,0.8],[0.8,0.07,0.13]) f.setGaussLocalizationOnCells([6,7,8,9],[0.,0.,1.,0.,1.,1.,0.,1.,0.5,0.,1.,0.5,0.5,1.,0.,0.5],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8,0.8,0.8],[0.8,0.07,0.1,0.01,0.02]) - f.checkCoherency() + f.checkConsistencyLight() # mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) @@ -1631,12 +1744,12 @@ class MEDLoaderTest(unittest.TestCase): f3=f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) f3.renumberCells([0,1,3,2,4,5,6,7,8,9]) self.assertTrue(f.isEqual(f3,1e-12,1e-12)) - f3_bis=MEDLoader.ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + f3_bis=ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_bis.renumberCells([0,1,3,2,4,5,6,7,8,9]) self.assertTrue(f.isEqual(f3_bis,1e-12,1e-12)) # - MEDLoader.WriteField(fname2,f,True) - f3_ter=MEDLoader.ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + WriteField(fname2,f,True) + f3_ter=ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_ter.renumberCells([0,1,3,2,4,5,6,7,8,9]) self.assertTrue(f.isEqual(f3_ter,1e-12,1e-12)) ## Use case 3 : no pfl but creation of pfls due to gauss pts @@ -1651,7 +1764,7 @@ class MEDLoaderTest(unittest.TestCase): f.setGaussLocalizationOnCells([11,12],[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8,0.8,0.8],[0.8,0.07,0.1,0.01,0.02]) f.setGaussLocalizationOnCells([13,14,15,17,18],[0.,0.,1.,0.,1.,1.,0.,1.,0.5,0.,1.,0.5,0.5,1.,0.,0.5],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8],[0.8,0.1,0.03,0.07]) f.setGaussLocalizationOnCells([16,19],[0.,0.,1.,0.,1.,1.,0.,1.,0.5,0.,1.,0.5,0.5,1.,0.,0.5],[0.3,0.3,0.7,0.7,0.8,0.8],[0.8,0.1,0.1]) - f.checkCoherency() + f.checkConsistencyLight() mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) f1ts=MEDFileField1TS.New() @@ -1670,12 +1783,12 @@ class MEDLoaderTest(unittest.TestCase): f3=f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) f3.renumberCells([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,17,18,16,19]) self.assertTrue(f.isEqual(f3,1e-12,1e-12)) - f3_bis=MEDLoader.ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + f3_bis=ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_bis.renumberCells([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,17,18,16,19]) self.assertTrue(f.isEqual(f3_bis,1e-12,1e-12)) # - MEDLoader.WriteField(fname2,f,True) - f3_ter=MEDLoader.ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + WriteField(fname2,f,True) + f3_ter=ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_ter.renumberCells([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,17,18,16,19]) self.assertTrue(f.isEqual(f3_ter,1e-12,1e-12)) pass @@ -1729,36 +1842,36 @@ class MEDLoaderTest(unittest.TestCase): ## Reading from file m=MEDFileMesh.New(fname) m0=m.getMeshAtLevel(0) - m00=m0.deepCpy() ; m00=m00[[0,2]] ; m00.setName(m.getName()) ; m00.zipCoords() + m00=m0.deepCopy() ; m00=m00[[0,2]] ; m00.setName(m.getName()) ; m00.zipCoords() fieldNode0.setMesh(m00) f0=MEDFileField1TS.New(fname,fieldNode0.getName(),dt,it) ff0_1=f0.getFieldOnMeshAtLevel(ON_NODES,m0) - ff0_1.checkCoherency() + ff0_1.checkConsistencyLight() self.assertTrue(ff0_1.isEqual(fieldNode0,1e-12,1e-12)) ff0_2=f0.getFieldAtLevel(ON_NODES,0) - ff0_2.checkCoherency() + ff0_2.checkConsistencyLight() self.assertTrue(ff0_2.isEqual(fieldNode0,1e-12,1e-12)) ff0_3=f0.getFieldOnMeshAtLevel(ON_NODES,0,m) - ff0_3.checkCoherency() + ff0_3.checkConsistencyLight() self.assertTrue(ff0_3.isEqual(fieldNode0,1e-12,1e-12)) - ff0_4=MEDLoader.ReadFieldNode(fname,m.getName(),0,fieldNode0.getName(),dt,it) - ff0_4.checkCoherency() + ff0_4=ReadFieldNode(fname,m.getName(),0,fieldNode0.getName(),dt,it) + ff0_4.checkConsistencyLight() self.assertTrue(ff0_4.isEqual(fieldNode0,1e-12,1e-12)) f1=MEDFileField1TS.New(fname,fieldNode1.getName(),dt,it) m1=m.getMeshAtLevel(-1) - m10=m1.deepCpy() ; m10=m10[[0,1,2,3,4,5,6,7]] ; m10.setName(m.getName()) ; m10.zipCoords() + m10=m1.deepCopy() ; m10=m10[[0,1,2,3,4,5,6,7]] ; m10.setName(m.getName()) ; m10.zipCoords() fieldNode1.setMesh(m10) ff1_1=f1.getFieldOnMeshAtLevel(ON_NODES,m1) - ff1_1.checkCoherency() + ff1_1.checkConsistencyLight() self.assertTrue(ff1_1.isEqual(fieldNode1,1e-12,1e-12)) ff1_2=f1.getFieldAtLevel(ON_NODES,-1) - ff1_2.checkCoherency() + ff1_2.checkConsistencyLight() self.assertTrue(ff1_2.isEqual(fieldNode1,1e-12,1e-12)) ff1_3=f1.getFieldOnMeshAtLevel(ON_NODES,-1,m) - ff1_3.checkCoherency() + ff1_3.checkConsistencyLight() self.assertTrue(ff1_3.isEqual(fieldNode1,1e-12,1e-12)) - ff1_4=MEDLoader.ReadFieldNode(fname,m.getName(),-1,fieldNode1.getName(),dt,it) - ff1_4.checkCoherency() + ff1_4=ReadFieldNode(fname,m.getName(),-1,fieldNode1.getName(),dt,it) + ff1_4.checkConsistencyLight() self.assertTrue(ff1_4.getMesh().isEqual(m10,1e-12)) self.assertRaises(InterpKernelException,f1.getFieldOnMeshAtLevel,ON_NODES,m0) # error because impossible to build a sub mesh at level 0 lying on nodes [0,1,2,3,4,5,6] self.assertRaises(InterpKernelException,f1.getFieldAtLevel,ON_NODES,0) # error because impossible to build a sub mesh at level 0 lying on nodes [0,1,2,3,4,5,6] @@ -1819,36 +1932,36 @@ class MEDLoaderTest(unittest.TestCase): ## Reading from file m=MEDFileMesh.New(fname) m0=m.getMeshAtLevel(0) - m00=m0.deepCpy() ; m00=m00[pfl0] ; m00.setName(m.getName()) + m00=m0.deepCopy() ; m00=m00[pfl0] ; m00.setName(m.getName()) fieldCell0.setMesh(m00) f0=MEDFileField1TS.New(fname,fieldCell0.getName(),dt,it) ff0_1=f0.getFieldOnMeshAtLevel(ON_CELLS,m0) - ff0_1.checkCoherency() + ff0_1.checkConsistencyLight() self.assertTrue(ff0_1.isEqual(fieldCell0,1e-12,1e-12)) ff0_2=f0.getFieldAtLevel(ON_CELLS,0) - ff0_2.checkCoherency() + ff0_2.checkConsistencyLight() self.assertTrue(ff0_2.isEqual(fieldCell0,1e-12,1e-12)) ff0_3=f0.getFieldOnMeshAtLevel(ON_CELLS,0,m) - ff0_3.checkCoherency() + ff0_3.checkConsistencyLight() self.assertTrue(ff0_3.isEqual(fieldCell0,1e-12,1e-12)) - ff0_4=MEDLoader.ReadFieldCell(fname,m.getName(),0,fieldCell0.getName(),dt,it) - ff0_4.checkCoherency() + ff0_4=ReadFieldCell(fname,m.getName(),0,fieldCell0.getName(),dt,it) + ff0_4.checkConsistencyLight() self.assertTrue(ff0_4.isEqual(fieldCell0,1e-12,1e-12)) f1=MEDFileField1TS.New(fname,fieldCell1.getName(),dt,it) m1=m.getMeshAtLevel(-1) - m10=m1.deepCpy() ; m10=m10[pfl1] ; m10.setName(m.getName()) + m10=m1.deepCopy() ; m10=m10[pfl1] ; m10.setName(m.getName()) fieldCell1.setMesh(m10) ff1_1=f1.getFieldOnMeshAtLevel(ON_CELLS,m1) - ff1_1.checkCoherency() + ff1_1.checkConsistencyLight() self.assertTrue(ff1_1.isEqual(fieldCell1,1e-12,1e-12)) ff1_2=f1.getFieldAtLevel(ON_CELLS,-1) - ff1_2.checkCoherency() + ff1_2.checkConsistencyLight() self.assertTrue(ff1_2.isEqual(fieldCell1,1e-12,1e-12)) ff1_3=f1.getFieldOnMeshAtLevel(ON_CELLS,-1,m) - ff1_3.checkCoherency() + ff1_3.checkConsistencyLight() self.assertTrue(ff1_3.isEqual(fieldCell1,1e-12,1e-12)) - ff1_4=MEDLoader.ReadFieldCell(fname,m.getName(),-1,fieldCell1.getName(),dt,it) - ff1_4.checkCoherency() + ff1_4=ReadFieldCell(fname,m.getName(),-1,fieldCell1.getName(),dt,it) + ff1_4.checkConsistencyLight() self.assertTrue(ff1_4.getMesh().isEqual(m10,1e-12)) self.assertRaises(InterpKernelException,f1.getFieldOnMeshAtLevel,ON_CELLS,m0) # error because impossible to build a sub mesh at level 0 lying on cells [0,1,2,3,4,5,6] self.assertRaises(InterpKernelException,f1.getFieldAtLevel,ON_CELLS,0) # error because impossible to build a sub mesh at level 0 lying on cells [0,1,2,3,4,5,6] @@ -1897,7 +2010,7 @@ class MEDLoaderTest(unittest.TestCase): m1.setCoords(coo) ; m.setMeshAtLevel(-1,m1) m2.setCoords(coo) ; m.setMeshAtLevel(-2,m2) # - mm=m.deepCpy() + mm=m.deepCopy() famCoo=DataArrayInt([0,2,0,3,2,0,-1,0,0,0,0,-1,3]) ; mm.setFamilyFieldArr(1,famCoo) da0=DataArrayInt([0,0,0]) ; mm.setFamilyFieldArr(0,da0) da1=DataArrayInt([0,3]) ; mm.setFamilyFieldArr(-1,da1) @@ -1968,7 +2081,7 @@ class MEDLoaderTest(unittest.TestCase): m1.setCoords(coo) ; m.setMeshAtLevel(-1,m1) m2.setCoords(coo) ; m.setMeshAtLevel(-2,m2) # - mm=m.deepCpy() + mm=m.deepCopy() famCoo=DataArrayInt([0,2,0,3,2,0,-1,0,0,0,0,-1,3]) ; mm.setFamilyFieldArr(0,famCoo) da0=DataArrayInt([0,0,0]) ; mm.setFamilyFieldArr(1,da0) da1=DataArrayInt([0,3]) ; mm.setFamilyFieldArr(-1,da1) @@ -2035,25 +2148,25 @@ class MEDLoaderTest(unittest.TestCase): # mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) - self.assertIn(mm.getHeapMemorySize(),xrange(3889-100,3889+100+10*strMulFac)) + self.assertIn(mm.getHeapMemorySize(),xrange(3889-100,4225+100+10*strMulFac)) ff=MEDFileField1TS() ff.setFieldNoProfileSBT(f) - self.assertIn(ff.getHeapMemorySize(),xrange(771-40,771+21+(4+1)*strMulFac)) + self.assertIn(ff.getHeapMemorySize(),xrange(771-40,871+21+(4+1)*strMulFac)) # fff=MEDFileFieldMultiTS() fff.appendFieldNoProfileSBT(f) - self.assertIn(fff.getHeapMemorySize(),xrange(815-50,815+30+(6+2)*strMulFac)) + self.assertIn(fff.getHeapMemorySize(),xrange(815-50,915+30+(6+2)*strMulFac)) f.setTime(1.,0,-1) fff.appendFieldNoProfileSBT(f) - self.assertIn(fff.getHeapMemorySize(),xrange(1594-90,1594+50+(10+1)*strMulFac)) - self.assertIn(fff[0,-1].getHeapMemorySize(),xrange(771-40,771+20+(4+1)*strMulFac)) + self.assertIn(fff.getHeapMemorySize(),xrange(1594-90,1794+50+(10+1)*strMulFac)) + self.assertIn(fff[0,-1].getHeapMemorySize(),xrange(771-40,871+20+(4+1)*strMulFac)) f2=f[:50] f2.setTime(2.,1,-1) pfl=DataArrayInt.Range(0,50,1) ; pfl.setName("pfl") fff.appendFieldProfile(f2,mm,0,pfl) - self.assertIn(fff.getHeapMemorySize(),xrange(2348-130,2348+100+(10+2)*strMulFac)) + self.assertIn(fff.getHeapMemorySize(),xrange(2348-130,2608+100+(10+2)*strMulFac)) self.assertIn(fff.getProfile("pfl").getHeapMemorySize(),xrange(204-10,204+10+2*strMulFac)) - self.assertIn(fff[1,-1].getHeapMemorySize(),xrange(738-50,738+30+4*strMulFac)) + self.assertIn(fff[1,-1].getHeapMemorySize(),xrange(738-50,838+30+4*strMulFac)) pass def testCurveLinearMesh1(self): @@ -2067,7 +2180,7 @@ class MEDLoaderTest(unittest.TestCase): a1.iota(7.) ; a1.rearrange(3); mesh.setCoords(a1); mesh.setNodeGridStructure([4,5]); - mesh.checkCoherency(); + mesh.checkConsistencyLight(); # m=MEDFileCurveLinearMesh() m.setMesh(mesh) @@ -2108,15 +2221,15 @@ class MEDLoaderTest(unittest.TestCase): pts.setName("A") ; pts.setDescription("An example of parameter") ; pts.setTimeUnit("ms") pts.appendValue(1,2,3.4,567.89) pts.appendValue(2,3,5.6,999.123) - pts2=pts.deepCpy() ; pts2.setName("B") ; pts2.setDescription("A second example") + pts2=pts.deepCopy() ; pts2.setName("B") ; pts2.setDescription("A second example") p.pushParam(pts) ; p.pushParam(pts2) data.write(fname,2) p2=MEDFileParameters(fname) self.assertTrue(p.isEqual(p2,1e-14)[0]) self.assertAlmostEqual(p[1][1,2].getValue(),567.89,13) - p3=p.deepCpy() - pts4=pts2.deepCpy() - pts3=pts2.deepCpy() + p3=p.deepCopy() + pts4=pts2.deepCopy() + pts3=pts2.deepCopy() self.assertTrue(pts3.isEqual(pts2,1e-14)[0]) pts2.eraseTimeStepIds([0]) self.assertTrue(not pts3.isEqual(pts2,1e-14)[0]) @@ -2163,10 +2276,10 @@ class MEDLoaderTest(unittest.TestCase): namesCellL0=DataArrayAsciiChar(6,16) namesCellL0[:]=["CellL0#%.3d "%(i) for i in xrange(6)] mm.setNameFieldAtLevel(0,namesCellL0) - namesCellL1=DataArrayAsciiChar.Aggregate([namesCellL0,namesCellL0,namesCellL0.substr(2)]) + namesCellL1=DataArrayAsciiChar.Aggregate([namesCellL0,namesCellL0,namesCellL0.subArray(2)]) namesCellL1[:]=["CellLM1#%.3d "%(i) for i in xrange(16)] mm.setNameFieldAtLevel(-1,namesCellL1) - namesNodes=namesCellL1.substr(4,16) + namesNodes=namesCellL1.subArray(4,16) namesNodes[:]=["Node#%.3d "%(i) for i in xrange(12)] mm.setNameFieldAtLevel(1,namesNodes) mm.write(fname,2) @@ -2180,7 +2293,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(not mm.isEqual(mmr,1e-12)[0]) mmr.getNameFieldAtLevel(1).setIJ(0,0,'N') self.assertTrue(mm.isEqual(mmr,1e-12)[0]) - mmCpy=mm.deepCpy() + mmCpy=mm.deepCopy() self.assertTrue(mm.isEqual(mmCpy,1e-12)[0]) # remove names on nodes mmCpy.setNameFieldAtLevel(1,None) @@ -2211,7 +2324,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(not cc.isEqual(ccr,1e-12)[0]) ccr.getNameFieldAtLevel(1).setIJ(0,0,'N') self.assertTrue(cc.isEqual(ccr,1e-12)[0]) - ccCpy=cc.deepCpy() + ccCpy=cc.deepCopy() self.assertTrue(cc.isEqual(ccCpy,1e-12)[0]) pass @@ -2247,7 +2360,7 @@ class MEDLoaderTest(unittest.TestCase): c2.transformWithIndArr(whichGrp) splitOfM1=len(grps)*[None] for grpId,grp in enumerate(grps): - tmp=c2.getIdsEqual(grpId) + tmp=c2.findIdsEqual(grpId) splitOfM1[grpId]=tmp pass splitOfM1[0].isEqual(DataArrayInt([0,1,2,3,6,8,10,11,12,13])) @@ -2445,7 +2558,7 @@ class MEDLoaderTest(unittest.TestCase): # mm0=MEDFileMesh.New(fileName) mm1=MEDFileMesh.New(fileName) - groupNamesIni=MEDLoader.GetMeshGroupsNames(fileName,"ma") + groupNamesIni=GetMeshGroupsNames(fileName,"ma") for name in groupNamesIni: mm1.changeGroupName(name,name+'N') pass @@ -2466,8 +2579,7 @@ class MEDLoaderTest(unittest.TestCase): def testInt32InMEDFileFieldStar1(self): fname="Pyfile63.med" f1=MEDLoaderDataForTest.buildVecFieldOnCells_1(); - arr=f1.getArray().convertToIntArr() - f1.setArray(None) + f1=f1.convertToIntField() m1=f1.getMesh() mm1=MEDFileUMesh.New() mm1.setCoords(m1.getCoords()) @@ -2475,19 +2587,17 @@ class MEDLoaderTest(unittest.TestCase): mm1.setName(m1.getName()) mm1.write(fname,2) ff1=MEDFileIntField1TS() - ff1.setFieldNoProfileSBT(f1,arr) - a,b=ff1.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertEqual(b.getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) - self.assertTrue(b.isEqual(arr)) + ff1.setFieldNoProfileSBT(f1) + a=ff1.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) + self.assertEqual(a.getArray().getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) self.assertTrue(a.isEqual(f1,1e-12,1e-12)) ff1.write(fname,0) ff2=MEDFileAnyTypeField1TS.New(fname) self.assertEqual(ff2.getName(),"VectorFieldOnCells") self.assertEqual(ff2.getTime(),[0,1,2.0]) self.assertTrue(isinstance(ff2,MEDFileIntField1TS)) - a,b=ff1.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertEqual(b.getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) - self.assertTrue(b.isEqual(arr)) + a=ff1.getFieldOnMeshAtLevel(ON_CELLS,0,mm1) + self.assertEqual(a.getArray().getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) self.assertTrue(a.isEqual(f1,1e-12,1e-12)) ff2.setTime(1,2,3.) c=ff2.getUndergroundDataArray() ; c*=2 @@ -2496,42 +2606,40 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(ffs1.getTimeSteps(),[(0, 1, 2.0), (1, 2, 3.0)]) self.assertEqual(len(ffs1),2) self.assertTrue(isinstance(ffs1,MEDFileIntFieldMultiTS)) - a,b=ffs1[2.].getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertTrue(b.isEqual(arr)) + a=ffs1[2.].getFieldOnMeshAtLevel(ON_CELLS,0,mm1) self.assertTrue(a.isEqual(f1,1e-12,1e-12)) - a,b=ffs1[2.].getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertTrue(b.isEqual(arr)) + a=ffs1.getFieldOnMeshAtLevel(ON_CELLS,0,1,0,mm1) self.assertTrue(a.isEqual(f1,1e-12,1e-12)) it=ffs1.__iter__() ; it.next() ; ff2bis=it.next() - a,b=ff2bis.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertTrue(b.isEqual(2*arr)) - f1.setTime(3.,1,2) - self.assertTrue(a.isEqual(f1,1e-12,1e-12)) + a=ff2bis.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) + self.assertTrue(a.getArray().isEqual(2*f1.getArray())) + f1.setTime(3.,1,2) ; f1.getArray()[:]*=2 + self.assertTrue(a.isEqual(f1,1e-12,1e-12)) ; f1.getArray()[:]/=2 bc=DataArrayInt(6,3) ; bc[:]=0 ; bc.setInfoOnComponents(['power [MW/m^3]','density [g/cm^3]','temperature [K]']) for it in ffs1: - a,b=it.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - bc+=b + a=it.getFieldOnMeshAtLevel(ON_CELLS,0,mm1) + bc+=a.getArray() pass - self.assertTrue(bc.isEqual(3*arr)) - nf1=MEDCouplingFieldDouble(ON_NODES) + self.assertTrue(bc.isEqual(3*f1.getArray())) + nf1=MEDCouplingFieldInt(ON_NODES) nf1.setTime(9.,10,-1) nf1.setMesh(f1.getMesh()) narr=DataArrayInt(12,2) ; narr.setInfoOnComponents(["aa [u1]","bbbvv [ppp]"]) ; narr[:,0]=range(12) ; narr[:,1]=2*narr[:,0] - nf1.setName("VectorFieldOnNodes") + nf1.setName("VectorFieldOnNodes") ; nf1.setArray(narr) nff1=MEDFileIntField1TS.New() - nff1.setFieldNoProfileSBT(nf1,narr) + nff1.setFieldNoProfileSBT(nf1) self.assertEqual(nff1.getInfo(),('aa [u1]','bbbvv [ppp]')) self.assertEqual(nff1.getTime(),[10,-1,9.0]) nff1.write(fname,0) # - nf2=MEDCouplingFieldDouble(ON_NODES) + nf2=MEDCouplingFieldInt(ON_NODES) nf2.setTime(19.,20,-11) nf2.setMesh(f1.getMesh()) narr2=DataArrayInt(8,2) ; narr.setInfoOnComponents(["aapfl [u1]","bbbvvpfl [ppp]"]) ; narr2[:,0]=range(8) ; narr2[:,0]+=10 ; narr2[:,1]=3*narr2[:,0] - nf2.setName("VectorFieldOnNodesPfl") ; narr2.setName(nf2.getName()) + nf2.setName("VectorFieldOnNodesPfl") ; narr2.setName(nf2.getName()) ; nf2.setArray(narr2) nff2=MEDFileIntField1TS.New() npfl=DataArrayInt([1,2,4,5,6,7,10,11]) ; npfl.setName("npfl") - nff2.setFieldProfile(nf2,narr2,mm1,0,npfl) + nff2.setFieldProfile(nf2,mm1,0,npfl) nff2.getFieldWithProfile(ON_NODES,0,mm1) a,b=nff2.getFieldWithProfile(ON_NODES,0,mm1) ; b.setName(npfl.getName()) self.assertTrue(b.isEqual(npfl)) @@ -2558,8 +2666,8 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(isinstance(ffs[2],MEDFileFieldMultiTS)) self.assertTrue(isinstance(ffs[3],MEDFileIntFieldMultiTS)) # - self.assertTrue(fs["VectorFieldOnCells"][0].getUndergroundDataArray().isEqualWithoutConsideringStr(arr)) - self.assertTrue(fs["VectorFieldOnCells"][1,2].getUndergroundDataArray().isEqualWithoutConsideringStr(2*arr)) + self.assertTrue(fs["VectorFieldOnCells"][0].getUndergroundDataArray().isEqualWithoutConsideringStr(f1.getArray())) + self.assertTrue(fs["VectorFieldOnCells"][1,2].getUndergroundDataArray().isEqualWithoutConsideringStr(2*f1.getArray())) self.assertTrue(fs["VectorFieldOnNodesPfl"][0].getUndergroundDataArray().isEqualWithoutConsideringStr(narr2)) self.assertTrue(fs["VectorFieldOnNodes"][9.].getUndergroundDataArray().isEqualWithoutConsideringStr(narr)) self.assertTrue(fs["VectorFieldOnNodesDouble"][29.].getUndergroundDataArray().isEqualWithoutConsideringStr(f1.getMesh().getCoords(),1e-12)) @@ -2620,13 +2728,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2655,9 +2763,9 @@ class MEDLoaderTest(unittest.TestCase): pass # add a mismatch of nb of compos pass - fmts0_2=fmts0_0.deepCpy() - fmts0_3=fmts0_0.deepCpy() - fmts0_4=fmts0_0.deepCpy() + fmts0_2=fmts0_0.deepCopy() + fmts0_3=fmts0_0.deepCopy() + fmts0_4=fmts0_0.deepCopy() fmts0_5=fmts0_0.shallowCpy() self.assertTrue(len(fmts0_0)==10 and len(fmts0_1)==10 and len(fmts0_2)==10 and len(fmts0_3)==10 and len(fmts0_4)==10 and len(fmts0_5)==10) del fmts0_2[::2] @@ -2698,13 +2806,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2733,9 +2841,9 @@ class MEDLoaderTest(unittest.TestCase): fmts0_0.zipPflsNames() self.assertEqual(fmts0_0.getPfls(),('pfl_NORM_QUAD4',)) self.assertTrue(fmts0_1.getProfile("pfl_NORM_QUAD4").isEqual(fmts0_0.getProfile("pfl_NORM_QUAD4"))) - fmts0_2=fmts0_0.deepCpy() - fmts0_3=fmts0_0.deepCpy() - fmts0_4=fmts0_0.deepCpy() + fmts0_2=fmts0_0.deepCopy() + fmts0_3=fmts0_0.deepCopy() + fmts0_4=fmts0_0.deepCopy() fs0=MEDFileFields() fs0.pushField(fmts0_0) fmts0_2.setName("2ndField") ; fs0.pushField(fmts0_2) @@ -2763,13 +2871,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2832,13 +2940,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2847,7 +2955,7 @@ class MEDLoaderTest(unittest.TestCase): # ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m) ; arr=DataArrayDouble(m.getNumberOfCells()*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCell") - f0.checkCoherency() + f0.checkConsistencyLight() ff0.setFieldNoProfileSBT(f0) # fspExp=[(3,[(0,(0,4),'','')]),(4,[(0,(4,9),'','')])] @@ -2864,7 +2972,7 @@ class MEDLoaderTest(unittest.TestCase): del arr,f0,ff0,ff1,ff0i,fspExp ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["XX [pm]","YYY [hm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellPfl") - f0.checkCoherency() + f0.checkConsistencyLight() pfl=DataArrayInt.Range(0,7,1) ; pfl.setName("pfl") ff0.setFieldProfile(f0,mm,0,pfl) fspExp=[(3,[(0,(0,4),'','')]),(4,[(0,(4,7),'pfl_NORM_QUAD4','')])] @@ -2882,13 +2990,13 @@ class MEDLoaderTest(unittest.TestCase): ## MultiTimeSteps ff0=MEDFileFieldMultiTS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellMTime") ; f0.setTime(0.1,0,10) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldProfile(f0,mm,0,pfl) f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota(100) ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellMTime") ; f0.setTime(1.1,1,11) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldProfile(f0,mm,0,pfl) f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota(200) ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellMTime") ; f0.setTime(2.1,2,12) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldProfile(f0,mm,0,pfl) ff1=ff0.convertToInt() self.assertTrue(isinstance(ff1,MEDFileIntFieldMultiTS)) @@ -2934,13 +3042,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(30)] + tris=[tri.deepCopy() for i in xrange(30)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(40)] + quads=[quad.deepCopy() for i in xrange(40)] for i,elt in enumerate(quads): elt.translate([40+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2949,7 +3057,7 @@ class MEDLoaderTest(unittest.TestCase): # ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m) ; arr=DataArrayDouble(m.getNumberOfCells()*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCell") - f0.checkCoherency() + f0.checkConsistencyLight() ff0.setFieldNoProfileSBT(f0) ff0.write(fname,0) # @@ -2958,7 +3066,7 @@ class MEDLoaderTest(unittest.TestCase): # With profiles ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:50]) ; arr=DataArrayDouble(50*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["XX [pm]","YYY [hm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellPfl") - f0.checkCoherency() + f0.checkConsistencyLight() pfl=DataArrayInt.Range(0,50,1) ; pfl.setName("pfl") ff0.setFieldProfile(f0,mm,0,pfl) fspExp=[(3,[(0,(0,30),'','')]),(4,[(0,(30,50),'pfl_NORM_QUAD4','')])] @@ -2970,7 +3078,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(not ff0.getUndergroundDataArray().isAllocated()) self.assertEqual(ff0.getUndergroundDataArray().getInfoOnComponents(),['X [km]','YY [mm]']) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(182,298+2*strMulFac)) + self.assertIn(heap_memory_ref,xrange(182,465+2*strMulFac)) ff0.loadArrays() ## arr=DataArrayDouble(140) ; arr.iota() ; arr.rearrange(2) self.assertTrue(ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) @@ -2979,7 +3087,7 @@ class MEDLoaderTest(unittest.TestCase): ff0=MEDFileField1TS(fname,"FieldCellPfl",False) self.assertEqual(ff0.getUndergroundDataArray().getInfoOnComponents(),["XX [pm]","YYY [hm]"]) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(350,415+6*strMulFac)) + self.assertIn(heap_memory_ref,xrange(350,520+6*strMulFac)) ff0.loadArrays() ## arr=DataArrayDouble(100) ; arr.iota() ; arr.rearrange(2) self.assertTrue(ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) @@ -2997,7 +3105,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(ff0.getUndergroundDataArray().getIJ(30,1),5.5) self.assertTrue(not ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(1100,1215+2*strMulFac)) + self.assertIn(heap_memory_ref,xrange(1100,1384+2*strMulFac)) ff0.unloadArrays() hmd=ff0.getHeapMemorySize()-heap_memory_ref self.assertEqual(hmd,-800) # -50*8*2 @@ -3006,7 +3114,7 @@ class MEDLoaderTest(unittest.TestCase): # ff0=MEDFileField1TS(fname,"FieldCellPfl",-1,-1,False) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(299,415+6*strMulFac)) + self.assertIn(heap_memory_ref,xrange(299,520+6*strMulFac)) ff0.loadArrays() ## self.assertTrue(ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) self.assertEqual(ff0.getHeapMemorySize()-heap_memory_ref,50*8*2) @@ -3016,21 +3124,21 @@ class MEDLoaderTest(unittest.TestCase): for t in xrange(20): f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m) ; arr=DataArrayDouble(m.getNumberOfCells()*2) ; arr.iota(float(t+1000)) ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName(fieldName) f0.setTime(float(t)+0.1,t,100+t) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldNoProfileSBT(f0) pass ff0.write(fname,0) # ff0=MEDFileAnyTypeFieldMultiTS.New(fname,fieldName,False) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(5536,5956+(80+26)*strMulFac)) + self.assertIn(heap_memory_ref,xrange(5536,8212+(80+26)*strMulFac)) ff0.loadArrays() self.assertEqual(ff0.getHeapMemorySize()-heap_memory_ref,20*70*8*2) del ff0 # ffs=MEDFileFields(fname,False) heap_memory_ref=ffs.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(5335,6687+(80+50)*strMulFac)) + self.assertIn(heap_memory_ref,xrange(5335,9031+(80+50)*strMulFac)) ffs.loadArrays() self.assertEqual(ffs.getHeapMemorySize()-heap_memory_ref,20*70*8*2+70*8*2+50*8*2) pass @@ -3202,13 +3310,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -3317,13 +3425,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -3419,14 +3527,14 @@ class MEDLoaderTest(unittest.TestCase): m.insertNextCell([0,2,1,3]) m.setCoords(DataArrayDouble([0.,0.,1.,1.,1.,0.,0.,1.],4,2)) # - ms=[m.deepCpy() for i in xrange(4)] + ms=[m.deepCopy() for i in xrange(4)] for i,elt in enumerate(ms): elt.translate([float(i)*1.5,0.]) pass m0=MEDCoupling1SGTUMesh.Merge1SGTUMeshes(ms).buildUnstructured() m0.convertAllToPoly() # - ms=[m.deepCpy() for i in xrange(5)] + ms=[m.deepCopy() for i in xrange(5)] for i,elt in enumerate(ms): elt.translate([float(i)*1.5,1.5]) pass @@ -3457,7 +3565,7 @@ class MEDLoaderTest(unittest.TestCase): arr0=DataArrayDouble(9) ; arr0.iota() arr1=DataArrayDouble(9) ; arr1.iota(100) arr=DataArrayDouble.Meld(arr0,arr1) ; arr.setInfoOnComponents(["mm [kg]","sds [m]"]) - f.setArray(arr) ; f.checkCoherency() + f.setArray(arr) ; f.checkConsistencyLight() f.setTime(5.6,1,2) ff=MEDFileField1TS() ff.setFieldNoProfileSBT(f) @@ -3540,7 +3648,7 @@ class MEDLoaderTest(unittest.TestCase): for elt in [[0,1,2,3,4,5],[1,2,3,4,5,6],[2,3,4,5,6,7],[3,4,5,6,7,8]]:#4 m0.insertNextCell(NORM_PENTA6,elt) pass - m0.checkCoherency2() + m0.checkConsistency() m1=MEDCouplingUMesh(); m1.setName("mesh") m1.setMeshDimension(2); m1.allocateCells(5); @@ -3704,7 +3812,7 @@ class MEDLoaderTest(unittest.TestCase): m.changeSpaceDimension(3,0.) infos=["aa [b]","cc [de]","gg [klm]"] m.getCoords().setInfoOnComponents(infos) - m.checkCoherency2() + m.checkConsistency() mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) m1=MEDCouplingCMesh() ; m1.setCoords(arr) ; m1.setName("Mesh") @@ -3788,22 +3896,22 @@ class MEDLoaderTest(unittest.TestCase): m.changeSpaceDimension(3,0.) infos=["aa [b]","cc [de]","gg [klm]"] m.getCoords().setInfoOnComponents(infos) - m.checkCoherency2() + m.checkConsistency() f=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f.setMesh(m) f.setName("Field") arr=DataArrayDouble(25,2) ; arr.setInfoOnComponents(compos) arr[:,0]=range(25) arr[:,1]=range(100,125) f.setArray(arr) - MEDLoader.WriteField(fileName,f,2) + WriteField(fileName,f,2) f=MEDCouplingFieldDouble(ON_NODES,ONE_TIME) ; f.setMesh(m) f.setName("FieldNode") arr=DataArrayDouble(36,2) ; arr.setInfoOnComponents(compos) arr[:,0]=range(200,236) arr[:,1]=range(300,336) f.setArray(arr) - f.checkCoherency() - MEDLoader.WriteFieldUsingAlreadyWrittenMesh(fileName,f) + f.checkConsistencyLight() + WriteFieldUsingAlreadyWrittenMesh(fileName,f) # ms=MEDFileMeshes() mm=MEDFileUMesh.LoadPartOf(fileName,meshName,[NORM_QUAD4],[0,6,1]) @@ -3815,7 +3923,7 @@ class MEDLoaderTest(unittest.TestCase): mm=MEDFileUMesh.LoadPartOf(fileName,meshName,[NORM_QUAD4],[3,15,1]) ms.pushMesh(mm) fs=MEDFileFields.LoadPartOf(fileName,False,ms) - fs=fs.deepCpy() + fs=fs.deepCopy() fs[0][0].loadArrays() arr=DataArrayDouble(12,2) ; arr[:,0]=range(3,15) ; arr[:,1]=range(103,115) arr.setInfoOnComponents(compos) @@ -3853,22 +3961,22 @@ class MEDLoaderTest(unittest.TestCase): m.changeSpaceDimension(3,0.) infos=["aa [b]","cc [de]","gg [klm]"] m.getCoords().setInfoOnComponents(infos) - m.checkCoherency2() + m.checkConsistency() f=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f.setMesh(m) f.setName("Field") arr=DataArrayDouble(25,2) ; arr.setInfoOnComponents(compos) arr[:,0]=range(25) arr[:,1]=range(100,125) f.setArray(arr) - MEDLoader.WriteField(fileName,f,2) + WriteField(fileName,f,2) f=MEDCouplingFieldDouble(ON_NODES,ONE_TIME) ; f.setMesh(m) f.setName("FieldNode") arr=DataArrayDouble(36,2) ; arr.setInfoOnComponents(compos) arr[:,0]=range(200,236) arr[:,1]=range(300,336) f.setArray(arr) - f.checkCoherency() - MEDLoader.WriteFieldUsingAlreadyWrittenMesh(fileName,f) + f.checkConsistencyLight() + WriteFieldUsingAlreadyWrittenMesh(fileName,f) # ms=MEDFileMeshes() mm=MEDFileUMesh.LoadPartOf(fileName,meshName,[NORM_QUAD4],[4,6,1]) @@ -3926,7 +4034,7 @@ class MEDLoaderTest(unittest.TestCase): m=MEDCouplingUMesh.MergeUMeshesOnSameCoords([m0,m1]) m.setName(meshName2D) mMinus1,a,b,c,d=m.buildDescendingConnectivity() - e=d.deltaShiftIndex().getIdsEqual(1) + e=d.deltaShiftIndex().findIdsEqual(1) # mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) ; mm.setMeshAtLevel(-1,mMinus1) @@ -4004,7 +4112,7 @@ class MEDLoaderTest(unittest.TestCase): m.insertNextCell(NORM_POLYGON,4,targetConn[14:18]) m.finishInsertingCells(); m.setCoords(c) - m.checkCoherency() + m.checkConsistencyLight() m1=MEDCouplingUMesh.New(); m1.setMeshDimension(1); m1.allocateCells(3); @@ -4013,7 +4121,7 @@ class MEDLoaderTest(unittest.TestCase): m1.insertNextCell(NORM_SEG3,3,[2,8,5]) m1.finishInsertingCells(); m1.setCoords(c) - m1.checkCoherency() + m1.checkConsistencyLight() m2=MEDCouplingUMesh.New(); m2.setMeshDimension(0); m2.allocateCells(4); @@ -4023,7 +4131,7 @@ class MEDLoaderTest(unittest.TestCase): m2.insertNextCell(NORM_POINT1,1,[6]) m2.finishInsertingCells(); m2.setCoords(c) - m2.checkCoherency() + m2.checkConsistencyLight() # mm=MEDFileUMesh.New() self.assertTrue(mm.getUnivNameWrStatus()) @@ -4077,6 +4185,13 @@ class MEDLoaderTest(unittest.TestCase): st=cPickle.dumps(mm,cPickle.HIGHEST_PROTOCOL) mm2=cPickle.loads(st) self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + self.assertEqual(mm.getAxisType(),AX_CART) + # + mm.setAxisType(AX_CYL) + st=cPickle.dumps(mm,cPickle.HIGHEST_PROTOCOL) + mm2=cPickle.loads(st) + self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + self.assertEqual(mm2.getAxisType(),AX_CYL) pass def testMEDFileFieldsLoadSpecificEntities1(self): @@ -4190,7 +4305,7 @@ class MEDLoaderTest(unittest.TestCase): d[key]=[val] pass import re - allFields=MEDLoader.GetAllFieldNames(fileName) + allFields=GetAllFieldNames(fileName) allFieldsDict={} pat=re.compile("([\d]+)([\s\S]+)$") for st in allFields: @@ -4296,7 +4411,7 @@ class MEDLoaderTest(unittest.TestCase): field.setMesh(m) field.setArray(DataArrayDouble([1.2,2.3,3.4,4.5])) field.setName("Field") - field.checkCoherency() + field.checkConsistencyLight() pfl=DataArrayInt([0,1,2,3]) ; pfl.setName("TUTU") #<- false profile because defined on all cells ! ff.setFieldProfile(field,mm,0,pfl) # <- bug was revealed here ! self.assertEqual(ff.getPfls(),()) @@ -4316,7 +4431,7 @@ class MEDLoaderTest(unittest.TestCase): field.setMesh(m) field.setArray(DataArrayDouble([1.2,2.3,3.4,4.5])) field.setName("Field") - field.checkCoherency() + field.checkConsistencyLight() pfl=DataArrayInt([0,1,2,3]) ; pfl.setName("TUTU") ff.setFieldProfile(field,mm,0,pfl) self.assertEqual(ff.getPfls(),()) @@ -4344,7 +4459,7 @@ class MEDLoaderTest(unittest.TestCase): m3D=m.buildExtrudedMesh(m1D,0) m3D.sortCellsInMEDFileFrmt() m3D.setName(meshName) - m2D=m ; m2D.setCoords(m3D.getCoords()) ; m2D.shiftNodeNumbersInConn(delta) ; m2D.setName(meshName) ; m2D.checkCoherency2() + m2D=m ; m2D.setCoords(m3D.getCoords()) ; m2D.shiftNodeNumbersInConn(delta) ; m2D.setName(meshName) ; m2D.checkConsistency() m1D=m2D.computeSkin() ; m1D.setName(meshName) m0D=MEDCouplingUMesh.Build0DMeshFromCoords(m3D.getCoords()) ; m0D.setName(meshName) ; m0D=m0D[[2,4,10]] # @@ -4388,7 +4503,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(mm.getGroupsNames(),('grp0','grp1','grp2','grp3')) delta=12 for grp in [grp0,grp1,grp2,grp3]: - grpNode=grp.deepCpy() ; grpNode+=delta ; grpNode.setName("%s_node"%grp.getName()) + grpNode=grp.deepCopy() ; grpNode+=delta ; grpNode.setName("%s_node"%grp.getName()) mm.addGroup(1,grpNode) self.assertEqual(mm.getGroupsNames(),('grp0','grp0_node','grp1','grp1_node','grp2','grp2_node','grp3','grp3_node')) for grp in [grp0,grp1,grp2,grp3]: @@ -4583,7 +4698,7 @@ class MEDLoaderTest(unittest.TestCase): f.setMesh(m) f.setArray(DataArrayDouble(100)) f.getArray()[:]=100. - f.checkCoherency() + f.checkConsistencyLight() f1ts=MEDFileField1TS() f1ts.setFieldNoProfileSBT(f) # redirect stderr @@ -4640,9 +4755,9 @@ class MEDLoaderTest(unittest.TestCase): mesh=MEDFileUMesh() ; mesh[0]=m m1=m.computeSkin() ; mesh[-1]=m1 # - bary1=m1.getBarycenterAndOwner()[:,2] - grp1=bary1.getIdsInRange(hauteur-1e-12,hauteur+1e-12) ; grp1.setName(grpName1) - grp2=bary1.getIdsInRange(0.-1e-12,0.+1e-12) ; grp2.setName(grpName2) + bary1=m1.computeCellCenterOfMass()[:,2] + grp1=bary1.findIdsInRange(hauteur-1e-12,hauteur+1e-12) ; grp1.setName(grpName1) + grp2=bary1.findIdsInRange(0.-1e-12,0.+1e-12) ; grp2.setName(grpName2) mesh.setGroupsAtLevel(-1,[grp1,grp2]) import cPickle @@ -4695,7 +4810,7 @@ class MEDLoaderTest(unittest.TestCase): c.setArrayForType(NORM_QUAD4,corr) self.assertEqual(eq0.getCell().size(),1) self.assertTrue(eq0.getCell().getArray(NORM_QUAD4).isEqual(corr)) - mm2=mm.deepCpy() + mm2=mm.deepCopy() self.assertTrue(mm.isEqual(mm2,1e-12)[0]) self.assertEqual(mm2.getEquivalences().size(),1) self.assertTrue(mm2.getEquivalences().getEquivalence(0).getCell().getArray(NORM_QUAD4).isEqual(corr)) @@ -4709,7 +4824,958 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(mm.isEqual(mm3,1e-12)[0]) pass + def testMEDFileForFamiliesPlayer1(self): + """Non regression bug EDF11911. For serial killers using same family name to store both cells and nodes ! Only sky is the limit.""" + fileName="Pyfile98.med" + meshName="mesh" + magicSt="%s%%04i"%(MEDFileMesh.GetMagicFamilyStr()) + arr=DataArrayDouble(4) ; arr.iota() + m=MEDCouplingCMesh() ; m.setCoords(arr,arr) + m=m.buildUnstructured() + mm=MEDFileUMesh() + mm[0]=m + mm.setName(meshName) + mm.setFamilyId("FAMILLE_ZERO",0) + mm.getFamilyFieldAtLevel(0)[-3:]=-4 + mm.setFamilyId("RIDF%s"%(magicSt%0),-4) + mm.setGroupsOnFamily("RIDF%s"%(magicSt%0),["RID"]) + d=DataArrayInt(16) ; d[:]=0 ; d[[1,2,4,5]]=3 + mm.setFamilyFieldArr(1,d) + mm.setFamilyId("RIDF%s"%(magicSt%1),3) + mm.setGroupsOnFamily("RIDF%s"%(magicSt%1),["RID"]) + self.assertEqual(mm.getFamiliesNames(),("FAMILLE_ZERO",'RIDF!/__\\!0000','RIDF!/__\\!0001')) + self.assertEqual(mm.getFamiliesNamesWithFilePointOfView(),("FAMILLE_ZERO","RIDF","RIDF")) # <- the aim of test is here ! + self.assertEqual(mm.getFamiliesIdsOnGroup("RID"),(-4,3)) + mm.write(fileName,2) + # now read such funny file ! + mm2=MEDFileMesh.New(fileName) # <- normaly mdump of Pyfile98.med must contain only RID and FAMILLE_ZERO families. + self.assertTrue(mm.isEqual(mm2,1e-16)) + self.assertEqual(mm2.getFamiliesNames(),("FAMILLE_ZERO",'RIDF!/__\\!0000','RIDF!/__\\!0001')) + self.assertEqual(mm2.getFamiliesNamesWithFilePointOfView(),("FAMILLE_ZERO","RIDF","RIDF")) + self.assertEqual(mm2.getFamiliesIdsOnGroup("RID"),(-4,3))# <- very important too ! + pass + + def testCartesianizer1(self): + """ This test is advanced to be sure that no unnecessary copies had been made during cartesianization process. """ + # UMesh non cart + arr=DataArrayDouble(4) ; arr.iota() ; m=MEDCouplingCMesh() ; m.setCoords(arr,arr) ; m=m.buildUnstructured() + mm=MEDFileUMesh() ; mm[0]=m ; mm.forceComputationOfParts() + d0=DataArrayInt(16) ; d0[:]=0 + d1=DataArrayInt(9) ; d1[:]=0 + mm.setFamilyFieldArr(0,d1) ; mm.setFamilyFieldArr(1,d0) + mm.setName("a") ; mm.setDescription("b") ; mm.setTime(3,4,5.) ; mm.addFamily("c",-4) ; mm.setFamiliesOnGroup("d",["c"]) ; mm.setTimeUnit("ms") + ref0=mm.getCoords().getHiddenCppPointer() + ref1=mm[0].getNodalConnectivity().getHiddenCppPointer() + self.assertEqual(ref0,mm[0].getCoords().getHiddenCppPointer()) + ref2=mm[0].getNodalConnectivityIndex().getHiddenCppPointer() + ref3=mm.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getNodalConnectivity().getHiddenCppPointer() + self.assertEqual(ref0,mm.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getCoords().getHiddenCppPointer()) + mm.setAxisType(AX_CYL) #<- important + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + mm.setAxisType(AX_CART) # this is here only to avoid complaints + self.assertTrue(isinstance(mm2,MEDFileUMesh)) + self.assertTrue(mm.getHiddenCppPointer()!=mm2.getHiddenCppPointer()) + self.assertTrue(ref0==mm.getCoords().getHiddenCppPointer()) # <- here important + self.assertTrue(ref0!=mm2.getCoords().getHiddenCppPointer()) # <- here important + self.assertEqual(mm2.getCoords().getHiddenCppPointer(),mm2[0].getCoords().getHiddenCppPointer()) + self.assertEqual(mm2.getCoords().getHiddenCppPointer(),mm2.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getCoords().getHiddenCppPointer()) + self.assertEqual(mm2[0].getNodalConnectivity().getHiddenCppPointer(),ref1) # <- here very important + self.assertEqual(mm2[0].getNodalConnectivityIndex().getHiddenCppPointer(),ref2) # <- here very important + self.assertEqual(mm2.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getNodalConnectivity().getHiddenCppPointer(),ref3) # <- here very important + self.assertEqual(mm2.getName(),mm.getName()) + self.assertEqual(mm2.getDescription(),mm.getDescription()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTimeUnit(),mm.getTimeUnit()) + self.assertEqual(mm2.getGroupsNames(),mm.getGroupsNames()) + self.assertEqual(mm2.getFamiliesNames(),mm.getFamiliesNames()) + self.assertEqual([mm2.getFamilyId(elt) for elt in mm2.getFamiliesNames()],[mm.getFamilyId(elt2) for elt2 in mm.getFamiliesNames()]) + self.assertEqual(mm.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) # <- here very important + self.assertEqual(mm.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) # <- here very important + # UMesh cart + mm.setAxisType(AX_CART) + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileUMesh)) + self.assertTrue(mm.getHiddenCppPointer()==mm2.getHiddenCppPointer()) # optimization + # CurveLinearMesh non cart + arr=DataArrayDouble(4) ; arr.iota() ; m=MEDCouplingCMesh() ; m.setCoords(arr,arr) ; m=m.buildCurveLinear() + mm=MEDFileCurveLinearMesh() ; mm.setMesh(m) ; mm.setAxisType(AX_CYL) #<- important + mm.setFamilyFieldArr(0,d1) ; mm.setFamilyFieldArr(1,d0) + mm.setName("a") ; mm.setDescription("b") ; mm.setTime(3,4,5.) ; mm.addFamily("c",-4) ; mm.setFamiliesOnGroup("d",["c"]) ; mm.setTimeUnit("ms") + ref0=mm.getMesh().getCoords().getHiddenCppPointer() + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCurveLinearMesh)) + self.assertTrue(mm.getHiddenCppPointer()!=mm2.getHiddenCppPointer()) + self.assertTrue(ref0==mm.getMesh().getCoords().getHiddenCppPointer()) # <- here important + self.assertTrue(ref0!=mm2.getMesh().getCoords().getHiddenCppPointer()) # <- here important + self.assertEqual(mm2.getMesh().getNodeGridStructure(),mm.getMesh().getNodeGridStructure()) + self.assertEqual(mm2.getName(),mm.getName()) + self.assertEqual(mm2.getDescription(),mm.getDescription()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTimeUnit(),mm.getTimeUnit()) + self.assertEqual(mm2.getGroupsNames(),mm.getGroupsNames()) + self.assertEqual(mm2.getFamiliesNames(),mm.getFamiliesNames()) + self.assertEqual([mm2.getFamilyId(elt) for elt in mm2.getFamiliesNames()],[mm.getFamilyId(elt2) for elt2 in mm.getFamiliesNames()]) + self.assertEqual(mm.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) # <- here very important + self.assertEqual(mm.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) # <- here very important + # CurveLinearMesh cart + mm.setAxisType(AX_CART) + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCurveLinearMesh)) + self.assertTrue(mm.getHiddenCppPointer()==mm2.getHiddenCppPointer()) # optimization + # CMesh non cart + arr=DataArrayDouble(4) ; arr.iota() ; m=MEDCouplingCMesh() ; m.setCoords(arr,arr) + mm=MEDFileCMesh() ; mm.setMesh(m) ; mm.setAxisType(AX_CYL) #<- important + mm.setFamilyFieldArr(0,d1) ; mm.setFamilyFieldArr(1,d0) + mm.setName("a") ; mm.setDescription("b") ; mm.setTime(3,4,5.) ; mm.addFamily("c",-4) ; mm.setFamiliesOnGroup("d",["c"]) ; mm.setTimeUnit("ms") + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCurveLinearMesh)) + self.assertEqual(mm2.getMesh().getNodeGridStructure(),mm.getMesh().getNodeGridStructure()) + self.assertEqual(mm2.getName(),mm.getName()) + self.assertEqual(mm2.getDescription(),mm.getDescription()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTimeUnit(),mm.getTimeUnit()) + self.assertEqual(mm2.getGroupsNames(),mm.getGroupsNames()) + self.assertEqual(mm2.getFamiliesNames(),mm.getFamiliesNames()) + self.assertEqual([mm2.getFamilyId(elt) for elt in mm2.getFamiliesNames()],[mm.getFamilyId(elt2) for elt2 in mm.getFamiliesNames()]) + self.assertEqual(mm.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) # <- here very important + self.assertEqual(mm.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) # <- here very important + # CMesh cart + mm.setAxisType(AX_CART) + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCMesh)) + self.assertTrue(mm.getHiddenCppPointer()==mm2.getHiddenCppPointer()) # optimization + pass + + def testCheckCoherency(self): + m2 = MEDCouplingUMesh("2d", 2) + m2.setCoords(DataArrayDouble([(0.0, 1.0)] * 4, 4,2)) # whatever + m2.setConnectivity(DataArrayInt([NORM_TRI3, 0,1,2,NORM_TRI3, 1,2,3]), DataArrayInt(([0,4,8]))) + m1 , _, _ , _, _ = m2.buildDescendingConnectivity() + mum = MEDFileUMesh() + mum.setMeshAtLevel(0, m2) + mum.setMeshAtLevel(-1, m1) + mum.checkConsistency() + mum2 = mum.deepCopy() + + # Nodes + arr = DataArrayInt([2]*4) + mum.setFamilyFieldArr(1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*4) + mum.setRenumFieldArr(1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + mum.setRenumFieldArr(1, DataArrayInt([2]*4)) + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayAsciiChar(['tutu x']*4) + mum.setNameFieldAtLevel(1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + + # 2D + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*2) + mum.setFamilyFieldArr(0, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*2) + mum.setRenumFieldArr(0, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + mum.setRenumFieldArr(0, DataArrayInt([2]*2)) + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayAsciiChar(['tutu x']*2) + mum.setNameFieldAtLevel(0, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + + # 1D + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*5) + mum.setFamilyFieldArr(-1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*5) + mum.setRenumFieldArr(-1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + mum.setRenumFieldArr(-1, DataArrayInt([2]*5)) + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayAsciiChar(['tutu x']*5) + mum.setNameFieldAtLevel(-1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + + def testCheckSMESHConsistency(self): + m2 = MEDCouplingUMesh("2d", 2) + m2.setCoords(DataArrayDouble([(0.0, 1.0)] * 4, 4,2)) # whatever + m2.setConnectivity(DataArrayInt([NORM_TRI3, 0,1,2,NORM_TRI3, 1,2,3]), DataArrayInt(([0,4,8]))) + m1 , _, _ , _, _ = m2.buildDescendingConnectivity() + mum = MEDFileUMesh() + mum.setMeshAtLevel(0, m2) + mum.setMeshAtLevel(-1, m1) + mum.checkConsistency() + mum.checkSMESHConsistency() + n2 = DataArrayInt(m2.getNumberOfCells(), 1); n2.iota(1) + n1 = DataArrayInt(m1.getNumberOfCells(), 1); n1.iota(1) + mum.setRenumFieldArr(0, n2) + mum.setRenumFieldArr(-1, n1) + self.assertRaises(InterpKernelException, mum.checkSMESHConsistency) + mum.setRenumFieldArr(-1, n1+100) + mum.checkSMESHConsistency() + pass + + def testClearNodeAndCellNumbers(self): + m2 = MEDCouplingUMesh("2d", 2) + m2.setCoords(DataArrayDouble([(0.0, 1.0)] * 4, 4,2)) # whatever + m2.setConnectivity(DataArrayInt([NORM_TRI3, 0,1,2,NORM_TRI3, 1,2,3]), DataArrayInt(([0,4,8]))) + m1 , _, _ , _, _ = m2.buildDescendingConnectivity() + mum = MEDFileUMesh() + mum.setMeshAtLevel(0, m2) + mum.setMeshAtLevel(-1, m1) + mum.checkConsistency() + n2 = DataArrayInt(m2.getNumberOfCells(), 1); n2.iota(1) + n1 = DataArrayInt(m1.getNumberOfCells(), 1); n1.iota(1) + mum.setRenumFieldArr(0, n2) + mum.setRenumFieldArr(-1, n1) + mum.clearNodeAndCellNumbers() + mum.checkSMESHConsistency() + pass + + def testCMeshSetFamilyFieldArrNull(self): + meshName="mesh" + fname="Pyfile99.med" + arrX=DataArrayDouble([0,1,2,3]) + arrY=DataArrayDouble([0,1,2]) + m=MEDCouplingCMesh() ; m.setCoords(arrX,arrY) ; m.setName(meshName) + mm=MEDFileCMesh() ; mm.setMesh(m) + famCellIds=DataArrayInt([0,-2,-2,-1,-2,0]) + famNodeIds=DataArrayInt([0,0,0,3,4,1,2,7,2,1,0,0]) + mm.setFamilyFieldArr(0,famCellIds) + mm.setFamilyFieldArr(1,famNodeIds) + mm.write(fname,2) + mm=MEDFileMesh.New(fname) + self.assertTrue(mm.getFamilyFieldAtLevel(0) is not None) + self.assertTrue(mm.getFamilyFieldAtLevel(1) is not None) + mm.setFamilyFieldArr(0,None)#<- bug was here + mm.setFamilyFieldArr(1,None)#<- bug was here + self.assertTrue(mm.getFamilyFieldAtLevel(0) is None) + self.assertTrue(mm.getFamilyFieldAtLevel(1) is None) + mm3=mm.deepCopy() + self.assertTrue(mm3.getFamilyFieldAtLevel(0) is None) + self.assertTrue(mm3.getFamilyFieldAtLevel(1) is None) + mm.write(fname,2) + mm2=MEDFileMesh.New(fname) + self.assertTrue(mm2.getFamilyFieldAtLevel(0) is None) + self.assertTrue(mm2.getFamilyFieldAtLevel(1) is None) + pass + + def testAppendFieldProfileOnIntField(self): + fname="Pyfile100.med" + arrX=DataArrayDouble([0,1,2,3]) + arrY=DataArrayDouble([0,1,2]) + mesh=MEDCouplingCMesh() ; mesh.setCoords(arrX,arrY) ; mesh.setName("Mesh") + mm=MEDFileCMesh() + mm.setMesh(mesh) + # + fmts=MEDFileIntFieldMultiTS() + pflName="PFL" + pfl=DataArrayInt([1,3,5]) ; pfl.setName(pflName) + f=MEDCouplingFieldInt(ON_CELLS) ; f.setMesh(mesh) + fieldName="FieldOnCell" + f.setTime(1.2,1,1) ; f.setName(fieldName) + arr=DataArrayInt([101,102,103]) ; f.setArray(arr) + fmts.appendFieldProfile(f,mm,0,pfl) + # + mm.write(fname,2) + fmts.write(fname,0) + # + mm=MEDFileMesh.New(fname) + fmts=MEDFileAnyTypeFieldMultiTS.New(fname) + self.assertTrue(isinstance(fmts,MEDFileIntFieldMultiTS)) + self.assertEqual(fmts.getName(),fieldName) + self.assertEqual(len(fmts),1) + f1ts=fmts[0] + ftest,pfltest=f1ts.getFieldWithProfile(ON_CELLS,0,mm) + self.assertEqual(pfltest.getName(),pflName) + self.assertEqual(ftest.getName(),fieldName) + self.assertTrue(ftest.isEqualWithoutConsideringStr(arr)) + ftest2=f1ts.getFieldOnMeshAtLevel(ON_CELLS,0,mm) + self.assertTrue(ftest2.getArray().isEqualWithoutConsideringStr(arr)) + self.assertEqual(ftest2.getTime(),f.getTime()) + self.assertEqual(ftest2.getMesh().getNumberOfCells(),len(arr)) + pass + + def testMEDFileFieldEasyField1(self): + """Check for all spatial discretization of field (cells,nodes,elno,gauss) for double field that all is OK. Here no profile and only top level is considered.""" + ## Basic test on cells on top level + fname="Pyfile101.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[0]=m + mm.write(fname,2) + arr0=DataArrayDouble([10,11,12,13,100,101]) + f=MEDCouplingFieldDouble(ON_CELLS) ; f.setArray(arr0) ; f.setMesh(m) + f.setName(fieldName) ; f.setTime(2.,6,7) + f0=f.deepCopy() + ff=MEDFileFieldMultiTS() ; ff.appendFieldNoProfileSBT(f) + ff.write(fname,0) + arr2=arr0+1000 ; f.setArray(arr2) + f.setTime(3.,8,9) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f) + ff.write(fname,0) + f1=f.deepCopy() + ## + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,6,7) + ftst0=f1ts.field(mm) + self.assertTrue(f0.isEqual(ftst0,1e-12,1e-12)) + f1ts=MEDFileField1TS(fname,fieldName,8,9) + ftst1=f1ts.field(mm) + self.assertTrue(f1.isEqual(ftst1,1e-12,1e-12)) + fmts=MEDFileFieldMultiTS(fname,fieldName) + self.assertTrue(f1.isEqual(fmts.field(8,9,mm),1e-12,1e-12)) + ## Basic test on nodes on top level + f2=MEDCouplingFieldDouble(ON_NODES) ; arr2=DataArrayDouble([200,201,202]) ; arr2.setInfoOnComponent(0,"tutu") ; f2.setArray(arr2) ; f2.setMesh(m) ; f2.setTime(22.,23,24) + f2.setName(fieldName) + mm.write(fname,2) + ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f2) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,23,24) + self.assertTrue(f2.isEqual(f1ts.field(mm),1e-12,1e-12)) + fmts=MEDFileFieldMultiTS(fname,fieldName) + self.assertTrue(f2.isEqual(fmts.field(23,24,mm),1e-12,1e-12)) + ## Node on elements + f3=MEDCouplingFieldDouble(ON_GAUSS_NE) ; f3.setMesh(m) ; arr3=DataArrayDouble([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,1e-12)) + ## Gauss + f4=MEDCouplingFieldDouble(ON_GAUSS_PT) ; f4.setMesh(m) ; f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayDouble([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testMEDFileFieldEasyField2(self): + """Same thantestMEDFileFieldEasyField1 except that here intfields are considered. + Check for all spatial discretization of field (cells,nodes,elno,gauss) for int field that all is OK. Here no profile and only top level is considered.""" + ## Basic test on cells on top level + fname="Pyfile102.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[0]=m + mm.write(fname,2) + arr0=DataArrayInt([10,11,12,13,100,101]) + f=MEDCouplingFieldInt(ON_CELLS) ; f.setArray(arr0) ; f.setMesh(m) + f.setName(fieldName) ; f.setTime(2.,6,7) + f0=f.deepCopy() + ff=MEDFileIntFieldMultiTS() ; ff.appendFieldNoProfileSBT(f) + ff.write(fname,0) + arr2=arr0+1000 ; f.setArray(arr2) + f.setTime(3.,8,9) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f) + ff.write(fname,0) + f1=f.deepCopy() + ## + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,6,7) + ftst0=f1ts.field(mm) + self.assertTrue(f0.isEqual(ftst0,1e-12,1e-12)) + f1ts=MEDFileIntField1TS(fname,fieldName,8,9) + ftst1=f1ts.field(mm) + self.assertTrue(f1.isEqual(ftst1,1e-12,1e-12)) + fmts=MEDFileIntFieldMultiTS(fname,fieldName) + self.assertTrue(f1.isEqual(fmts.field(8,9,mm),1e-12,1e-12)) + ## Basic test on nodes on top level + f2=MEDCouplingFieldInt(ON_NODES) ; arr2=DataArrayInt([200,201,202]) ; arr2.setInfoOnComponent(0,"tutu") ; f2.setArray(arr2) ; f2.setMesh(m) ; f2.setTime(22.,23,24) + f2.setName(fieldName) + mm.write(fname,2) + ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f2) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,23,24) + self.assertTrue(f2.isEqual(f1ts.field(mm),1e-12,1e-12)) + fmts=MEDFileIntFieldMultiTS(fname,fieldName) + self.assertTrue(f2.isEqual(fmts.field(23,24,mm),1e-12,1e-12)) + ## Node on elements + f3=MEDCouplingFieldInt(ON_GAUSS_NE) ; f3.setMesh(m) ; arr3=DataArrayInt([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,1e-12)) + ## Gauss + f4=MEDCouplingFieldInt(ON_GAUSS_PT) ; f4.setMesh(m) ; f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayInt([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testMEDFileFieldEasyField3(self): + """Here a multi level mesh. And field on cells lying on different level of this mesh. Show how "field" method deal with that. Here on field double are considered.""" + fname="Pyfile103.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[-1]=m + m0=MEDCouplingUMesh("mesh",3) ; m0.setCoords(coo) + m0.allocateCells() + m0.insertNextCell(NORM_TETRA4,[3,2,5,0]) + m0.insertNextCell(NORM_TETRA4,[7,6,3,2]) + mm[0]=m0 + mm.write(fname,2) + # start slowly + f1=MEDCouplingFieldDouble(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayDouble([(0,100),(1,101)])) ; f1.setMesh(mm[0]) ; f1.setTime(4.,1,2) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,1,2) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,1e-12)) + # here f1 lying on level -1 not 0 check if "field" method detect it ! + f1=MEDCouplingFieldDouble(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayDouble([(0,100),(1,101),(0,100),(1,101),(0,100),(1,101)])) + f1.setMesh(mm[-1]) # -1 is very important + f1.setTime(16.,3,4) + f1.checkConsistencyLight() + mm.write(fname,2) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,3,4) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,1e-12)) + # nodes on elements + f3=MEDCouplingFieldDouble(ON_GAUSS_NE) + f3.setMesh(mm[-1]) # this line is important + arr3=DataArrayDouble([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,1e-12)) + # gauss + f4=MEDCouplingFieldDouble(ON_GAUSS_PT) + f4.setMesh(mm[-1]) # this line is important + f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayDouble([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testMEDFileFieldEasyField4(self): + """ Same than testMEDFileFieldEasyField3 but with integers""" + fname="Pyfile104.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[-1]=m + m0=MEDCouplingUMesh("mesh",3) ; m0.setCoords(coo) + m0.allocateCells() + m0.insertNextCell(NORM_TETRA4,[3,2,5,0]) + m0.insertNextCell(NORM_TETRA4,[7,6,3,2]) + mm[0]=m0 + mm.write(fname,2) + # start slowly + f1=MEDCouplingFieldInt(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayInt([(0,100),(1,101)])) ; f1.setMesh(mm[0]) ; f1.setTime(4.,1,2) + f1ts=MEDFileIntField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,1,2) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,1e-12)) + # here f1 lying on level -1 not 0 check if "field" method detect it ! + f1=MEDCouplingFieldInt(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayInt([(0,100),(1,101),(0,100),(1,101),(0,100),(1,101)])) + f1.setMesh(mm[-1]) # -1 is very important + f1.setTime(16.,3,4) + f1.checkConsistencyLight() + mm.write(fname,2) + f1ts=MEDFileIntField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,3,4) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,1e-12)) + # nodes on elements + f3=MEDCouplingFieldInt(ON_GAUSS_NE) + f3.setMesh(mm[-1]) # this line is important + arr3=DataArrayInt([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,1e-12)) + # gauss + f4=MEDCouplingFieldInt(ON_GAUSS_PT) + f4.setMesh(mm[-1]) # this line is important + f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayInt([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testMEDFileFieldEasyField5(self): + """More and more difficult now look at how profiles are managed by "field" method.""" + fname="Pyfile105.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[0]=m + mm.write(fname,2) + pfl=DataArrayInt([0,2,3,5]) ; pfl.setName("pfl") + m2=m.deepCopy()[pfl] ; m2.setName(m.getName()) + # + arr0=DataArrayDouble([10,11,12,13]) + f=MEDCouplingFieldDouble(ON_CELLS) ; f.setArray(arr0) ; f.setMesh(m2) + f.setName(fieldName) ; f.setTime(2.,6,7) ; f.checkConsistencyLight() + ff=MEDFileFieldMultiTS() ; ff.appendFieldProfile(f,mm,0,pfl) # ff is a field on profile + ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,6,7) + self.assertTrue(f.isEqual(f1ts.field(mm),1e-12,1e-12)) + # more complicated -> multi level + m0=MEDCouplingUMesh("mesh",3) ; m0.setCoords(coo) + m0.allocateCells() + m0.insertNextCell(NORM_TETRA4,[3,2,5,0]) + m0.insertNextCell(NORM_TETRA4,[7,6,3,2]) + mm2=MEDFileUMesh() + mm2[0]=m0 ; mm2[-1]=m + # + ff=MEDFileField1TS() ; ff.setFieldProfile(f,mm2,-1,pfl) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,6,7) + self.assertTrue(f.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testExtractPart1(self): + coo=DataArrayDouble([(0,0),(1,0),(2,0),(3,0),(4,0),(0,1),(1,1),(2,1),(3,1),(4,1),(0,2),(1,2),(2,2),(3,2),(4,2)]) + meshName="mesh" + m0=MEDCouplingUMesh(meshName,2) ; m0.setCoords(coo) ; m0.allocateCells() + m0.insertNextCell(NORM_TRI3,[8,4,3]) + m0.insertNextCell(NORM_TRI3,[8,9,4]) + m0.insertNextCell(NORM_TRI3,[7,13,8]) + m0.insertNextCell(NORM_TRI3,[7,12,13]) + m0.insertNextCell(NORM_TRI3,[0,6,1]) + m0.insertNextCell(NORM_TRI3,[0,5,6]) + m0.insertNextCell(NORM_QUAD4,[1,6,7,2]) + m0.insertNextCell(NORM_QUAD4,[2,7,8,3]) + m0.insertNextCell(NORM_QUAD4,[8,13,14,9]) + m0.insertNextCell(NORM_QUAD4,[6,11,12,7]) + m0.insertNextCell(NORM_QUAD4,[5,10,11,6]) + # + m1=MEDCouplingUMesh(meshName,1) ; m1.setCoords(coo) ; m1.allocateCells() + m1.insertNextCell(NORM_SEG2,[10,5]) + m1.insertNextCell(NORM_SEG2,[5,0]) + m1.insertNextCell(NORM_SEG2,[0,1]) + m1.insertNextCell(NORM_SEG2,[1,2]) + m1.insertNextCell(NORM_SEG2,[2,3]) + m1.insertNextCell(NORM_SEG2,[3,4]) + m1.insertNextCell(NORM_SEG2,[4,9]) + m1.insertNextCell(NORM_SEG2,[9,14]) + m1.insertNextCell(NORM_SEG2,[14,13]) + m1.insertNextCell(NORM_SEG2,[13,12]) + m1.insertNextCell(NORM_SEG2,[12,11]) + m1.insertNextCell(NORM_SEG2,[11,10]) + mm=MEDFileUMesh() + mm[0]=m0 ; mm[-1]=m1 + arr0=DataArrayInt([0,1,2,3,4,6,7,8,12,13]) + tab={} # + tab[0]=DataArrayInt([0,2,3,4,6,7]) + tab[-1]=DataArrayInt([2,3,4,5,9]) + fs=MEDFileFields() + self.assertTrue(mm.deduceNodeSubPartFromCellSubPart(tab).isEqual(arr0)) + tab[1]=arr0 + # + fname0="Field0" + fmts=MEDFileFieldMultiTS() ; fs.pushField(fmts) + t0=(16.5,3,4) + ic=["toto [m]"] + arr0_0=DataArrayDouble([100,101,102,103,104,105,106,107,108,109,110]) ; arr0_0.setInfoOnComponents(ic) + f0=MEDCouplingFieldDouble(ON_CELLS) ; f0.setTime(*t0) ; f0.setArray(arr0_0) + f0.setMesh(m0) ; f0.setName(fname0) + f1=MEDCouplingFieldDouble(ON_CELLS) ; f1.setTime(*t0) ; f1.setArray(DataArrayDouble([200,201,202,203,204,205,206,207,208,209,210,211])) + f1.setMesh(m1) ; f1.setName(fname0) ; f1.getArray().setInfoOnComponents(ic) + f2=MEDCouplingFieldDouble(ON_NODES) ; f2.setTime(*t0) ; f2.setArray(DataArrayDouble([300,301,302,303,304,305,306,307,308,309,310,311,312,313,314])) + f2.setMesh(m0) ; f2.setName(fname0) ; f2.getArray().setInfoOnComponents(ic) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f0) ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.setFieldNoProfileSBT(f2) + fmts.pushBackTimeStep(f1ts) + # + mmOut=mm.extractPart(tab) + # + fsPart0=fs.extractPart(tab,mm) + self.assertEqual(len(fsPart0),1) + fmtsP=fsPart0[0] + self.assertEqual(len(fmtsP),1) + f1ts=fmtsP[0] + self.assertRaises(InterpKernelException,f1ts.field,mmOut) + # + self.assertTrue(mmOut[0].computeCellCenterOfMass().isEqual(m0[tab[0]].computeCellCenterOfMass(),1e-12)) + self.assertTrue(mmOut[-1].computeCellCenterOfMass().isEqual(m1[tab[-1]].computeCellCenterOfMass(),1e-12)) + # + m0Part=m0.deepCopy()[tab[0]] ; m0Part.renumberNodes(tab[1].invertArrayN2O2O2N(mm.getNumberOfNodes()),len(tab[1])) ; m0Part.setName(m0.getName()) + self.assertTrue(mmOut[0].isEqual(m0Part,1e-12)) + m1Part=m1.deepCopy()[tab[-1]] ; m1Part.renumberNodes(tab[1].invertArrayN2O2O2N(mm.getNumberOfNodes()),len(tab[1])) ; m1Part.setName(m0.getName()) + self.assertTrue(mmOut[0].isEqual(m0Part,1e-12)) + self.assertTrue(mmOut[-1].isEqual(m1Part,1e-12)) + # + f0Part=f1ts.getFieldOnMeshAtLevel(ON_CELLS,0,mmOut) ; f0Part.checkConsistencyLight() + self.assertEqual(f0Part.getTypeOfField(),ON_CELLS) + self.assertTrue(f0Part.getMesh().isEqual(m0Part,1e-12)) + arr0Exp=DataArrayDouble([100,102,103,104,106,107]) ; arr0Exp.setInfoOnComponents(ic) + self.assertTrue(f0Part.getArray().isEqual(arr0Exp,1e-12)) ; self.assertEqual(f0Part.getTime(),list(t0)) + f1Part=f1ts.getFieldOnMeshAtLevel(ON_CELLS,-1,mmOut) ; f1Part.checkConsistencyLight() + self.assertEqual(f1Part.getTypeOfField(),ON_CELLS) + self.assertTrue(f1Part.getMesh().isEqual(m1Part,1e-12)) + arr1Exp=DataArrayDouble([202,203,204,205,209]) ; arr1Exp.setInfoOnComponents(ic) + self.assertTrue(f1Part.getArray().isEqual(arr1Exp,1e-12)) ; self.assertEqual(f1Part.getTime(),list(t0)) + # + f2Part=f1ts.getFieldOnMeshAtLevel(ON_NODES,0,mmOut) ; f2Part.checkConsistencyLight() + arr2Exp=DataArrayDouble([300,301,302,303,304,306,307,308,312,313]) ; arr2Exp.setInfoOnComponents(ic) + self.assertTrue(f2Part.getArray().isEqual(arr2Exp,1e-12)) ; self.assertEqual(f2Part.getTime(),list(t0)) + # multisteps + fs=MEDFileFields() ; fmts=MEDFileFieldMultiTS() ; fs.pushField(fmts) + tss=[(16.5,3,4),(17.5,4,5),(18.5,5,6)] + for i,tt in enumerate(tss): + f0=MEDCouplingFieldDouble(ON_CELLS) ; f0.setTime(*tt) + myarr=arr0_0+i*1000. + f0.setArray(myarr) + f0.setMesh(m0) ; f0.setName(fname0) ; f0.getArray().setInfoOnComponents(ic) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f0) ; fmts.pushBackTimeStep(f1ts) + pass + fsPart1=fs.extractPart(tab,mm) + self.assertEqual(len(fsPart1),1) + fmtsP=fsPart1[0] + self.assertEqual(len(fmtsP),len(tss)) + for i,(f1tsP,tt) in enumerate(zip(fmtsP,tss)): + fPart=f1tsP.field(mmOut) ; fPart.checkConsistencyLight() + self.assertEqual(fPart.getTypeOfField(),ON_CELLS) + arr0Exp=DataArrayDouble([100,102,103,104,106,107]) ; arr0Exp.setInfoOnComponents(ic) ; arr0Exp+=i*1000. + self.assertTrue(fPart.getMesh().isEqual(m0Part,1e-12)) + self.assertTrue(fPart.getArray().isEqual(arr0Exp,1e-12)) + self.assertEqual(fPart.getTime(),list(tt)) + pass + pass + + def testSymmetryPlusAggregationMFD1(self): + """ Testing of MEDFileData::Aggregate and MEDFileUMesh::Aggregate and MEDFileUMesh::getAllDistributionOfType """ + fname1="Pyfile106_1.med" + fname2="Pyfile106_2.med" + fname3="Pyfile106_3.med" + meshName="mesh" + mm1=MEDFileUMesh() + da1=DataArrayDouble([1,2,10,3,4,11,5,6,12,7,8,13],4,3) ; da1.setInfoOnComponents(["aa [m]","bbb [kg]","cccc [MW]"]) + mm1.setCoords(da1) + mm1_0=MEDCouplingUMesh(meshName,3) ; mm1_0.allocateCells() + mm1_0.setCoords(da1) + mm1_0.insertNextCell(NORM_TETRA4,[0,1,2,3]) + mm1_0.insertNextCell(NORM_TETRA4,[4,5,6,7]) + mm1_0.insertNextCell(NORM_PENTA6,[8,9,10,11,12,13]) + mm1_0.insertNextCell(NORM_PENTA6,[14,15,16,17,18,19]) + mm1_0.insertNextCell(NORM_PENTA6,[20,21,22,23,24,25]) + mm1[0]=mm1_0 + mm1.setFamilyFieldArr(0,DataArrayInt([1,2,3,4,5])) + mm1.setRenumFieldArr(0,DataArrayInt([11,12,13,14,15])) + # + mm1_1=MEDCouplingUMesh(meshName,2) ; mm1_1.allocateCells() + mm1_1.setCoords(da1) + mm1_1.insertNextCell(NORM_TRI3,[0,1,2]) + mm1_1.insertNextCell(NORM_TRI3,[3,4,5]) + mm1_1.insertNextCell(NORM_QUAD4,[6,7,8,9]) + mm1_1.insertNextCell(NORM_QUAD4,[10,11,12,13]) + mm1_1.insertNextCell(NORM_QUAD4,[14,15,16,17]) + mm1_1.insertNextCell(NORM_QUAD4,[18,19,20,21]) + mm1[-1]=mm1_1 + mm1.setFamilyFieldArr(-1,DataArrayInt([6,7,8,9,10,11])) + mm1.setRenumFieldArr(-1,DataArrayInt([16,17,18,19,20,21])) + for i in range(1,10): + mm1.setFamilyId("F%d"%i,i) + mm1.setFamilyId("FAMILLE_ZERO",0) + mm1.setFamilyId("H1",100) + mm1.setFamiliesOnGroup("myGRP",["F2","F6"]) + mm1.setFamiliesOnGroup("myGRP1",["F2","F6"]) + mm1.setFamilyFieldArr(1,DataArrayInt([12,13,14,15])) + mm1.setRenumFieldArr(1,DataArrayInt([22,23,24,25])) + ############## + mm2=MEDFileUMesh() + da1=DataArrayDouble([9,10,30,11,12,31,13,14,32,15,16,33,17,18,34],5,3) ; da1.setInfoOnComponents(["aa [m]","bbb [kg]","cccc [MW]"]) + mm2.setCoords(da1) + mm2_0=MEDCouplingUMesh(meshName,3) ; mm2_0.allocateCells() + mm2_0.setCoords(da1) + mm2_0.insertNextCell(NORM_TETRA4,[100,101,102,103]) + mm2_0.insertNextCell(NORM_TETRA4,[104,105,106,107]) + mm2_0.insertNextCell(NORM_TETRA4,[108,109,110,111]) + mm2_0.insertNextCell(NORM_PENTA6,[112,113,114,115,116,117]) + mm2[0]=mm2_0 + mm2.setFamilyFieldArr(0,DataArrayInt([40,41,42,43])) + mm2.setRenumFieldArr(0,DataArrayInt([50,51,52,53])) + # + mm2_1=MEDCouplingUMesh(meshName,2) ; mm2_1.allocateCells() + mm2_1.setCoords(da1) + mm2_1.insertNextCell(NORM_TRI3,[100,101,102]) + mm2_1.insertNextCell(NORM_TRI3,[103,104,105]) + mm2_1.insertNextCell(NORM_TRI3,[106,107,108]) + mm2_1.insertNextCell(NORM_QUAD4,[109,110,111,112]) + mm2_1.insertNextCell(NORM_QUAD4,[113,114,115,116]) + mm2_1.insertNextCell(NORM_QUAD4,[117,118,119,120]) + mm2_1.insertNextCell(NORM_QUAD4,[121,122,123,124]) + mm2_1.insertNextCell(NORM_QUAD4,[125,126,127,128]) + mm2[-1]=mm2_1 + mm2.setFamilyFieldArr(-1,DataArrayInt([200,201,202,203,204,205,206,207])) + mm2.setRenumFieldArr(-1,DataArrayInt([300,301,302,303,304,305,306,307])) + for i in range(1,12): + mm2.setFamilyId("G%d"%i,i+30) + mm2.setFamilyId("H1",100) + mm2.setFamilyId("FAMILLE_ZERO",0) + mm2.setFamiliesOnGroup("myGRP",["G2","G6"]) + mm2.setFamiliesOnGroup("myGRP2",["G4","G7"]) + mm2.setFamilyFieldArr(1,DataArrayInt([112,113,114,115,116])) + mm2.setRenumFieldArr(1,DataArrayInt([122,123,124,125,126])) + # + mm=MEDFileUMesh.Aggregate([mm1,mm2]) + ####### + def CheckMesh(tester,mm): + cooExp=DataArrayDouble([(1,2,10),(3,4,11),(5,6,12),(7,8,13),(9,10,30),(11,12,31),(13,14,32),(15,16,33),(17,18,34)]) ; cooExp.setInfoOnComponents(["aa [m]","bbb [kg]","cccc [MW]"]) + tester.assertTrue(mm.getCoords().isEqual(cooExp,1e-12)) + tester.assertTrue(mm[0].getNodalConnectivity().isEqual(DataArrayInt([14,0,1,2,3,14,4,5,6,7,14,104,105,106,107,14,108,109,110,111,14,112,113,114,115,16,8,9,10,11,12,13,16,14,15,16,17,18,19,16,20,21,22,23,24,25,16,116,117,118,119,120,121]))) + tester.assertTrue(mm[0].getNodalConnectivityIndex().isEqual(DataArrayInt([0,5,10,15,20,25,32,39,46,53]))) + tester.assertTrue(mm[-1].getNodalConnectivity().isEqual(DataArrayInt([3,0,1,2,3,3,4,5,3,104,105,106,3,107,108,109,3,110,111,112,4,6,7,8,9,4,10,11,12,13,4,14,15,16,17,4,18,19,20,21,4,113,114,115,116,4,117,118,119,120,4,121,122,123,124,4,125,126,127,128,4,129,130,131,132]))) + tester.assertTrue(mm[-1].getNodalConnectivityIndex().isEqual(DataArrayInt([0,4,8,12,16,20,25,30,35,40,45,50,55,60,65]))) + tester.assertTrue(mm.getFamilyFieldAtLevel(0).isEqual(DataArrayInt([1,2,40,41,42,3,4,5,43]))) + tester.assertTrue(mm.getNumberFieldAtLevel(0).isEqual(DataArrayInt([11,12,50,51,52,13,14,15,53]))) + tester.assertTrue(mm.getFamilyFieldAtLevel(-1).isEqual(DataArrayInt([6,7,200,201,202,8,9,10,11,203,204,205,206,207]))) + tester.assertTrue(mm.getNumberFieldAtLevel(-1).isEqual(DataArrayInt([16,17,300,301,302,18,19,20,21,303,304,305,306,307]))) + refFamIds=[("FAMILLE_ZERO",0),('F1',1),('F2',2),('F3',3),('F4',4),('F5',5),('F6',6),('F7',7),('F8',8),('F9',9),('G1',31),('G10',40),('G11',41),('G2',32),('G3',33),('G4',34),('G5',35),('G6',36),('G7',37),('G8',38),('G9',39),("H1",100)] + tester.assertEqual(set(mm.getFamiliesNames()),set([elt[0] for elt in refFamIds])) + tester.assertEqual(set([mm.getFamilyId(elt) for elt in mm.getFamiliesNames()]),set([elt[1] for elt in refFamIds])) + tester.assertEqual(mm.getGroupsNames(),('myGRP','myGRP1','myGRP2')) + tester.assertEqual(mm.getAllDistributionOfTypes(),[(NORM_TRI3,5),(NORM_QUAD4,9),(NORM_TETRA4,5),(NORM_PENTA6,4),(NORM_ERROR,9)]) + pass + CheckMesh(self,mm) + ## + fieldName="zeField" + t1=(2.3,3,5) + t2=(5.6,7,12) + infoc=["dd [W]","eee [kA]"] + ## + fmts1=MEDFileFieldMultiTS() + f1ts1=MEDFileField1TS() + f1_1=MEDCouplingFieldDouble(ON_CELLS) ; f1_1.setMesh(mm1[0]) ; f1_1.setName(fieldName) + arr1=DataArrayDouble([(10,110),(11,111),(12,112),(13,113),(14,114)]) + arr1.setInfoOnComponents(infoc) + f1_1.setArray(arr1) ; f1_1.setTime(*t1) ; f1_1.setTimeUnit("ms") + f1_1.checkConsistencyLight() + f1ts1.setFieldNoProfileSBT(f1_1) + # + f1_2=MEDCouplingFieldDouble(ON_CELLS) ; f1_2.setMesh(mm1[-1]) ; f1_2.setName(fieldName) + arr2=DataArrayDouble([(15,115),(16,116),(17,117),(18,118),(19,119),(20,120)]) + arr2.setInfoOnComponents(infoc) + f1_2.setArray(arr2) ; f1_2.setTime(*t1) ; f1_2.setTimeUnit("ms") + f1_2.checkConsistencyLight() + f1ts1.setFieldNoProfileSBT(f1_2) + f1_3=MEDCouplingFieldDouble(ON_NODES) ; f1_3.setMesh(mm1[0]) ; f1_3.setName(fieldName) + arr3=DataArrayDouble([(21,121),(22,122),(23,123),(24,124)]) + arr3.setInfoOnComponents(infoc) + f1_3.setArray(arr3) ; f1_3.setTime(*t1) ; f1_3.setTimeUnit("ms") + f1_3.checkConsistencyLight() + f1ts1.setFieldNoProfileSBT(f1_3) + fmts1.pushBackTimeStep(f1ts1) + # + f1ts2=f1ts1.deepCopy() + f1ts2.setTime(t2[1],t2[2],t2[0]) + f1ts2.getUndergroundDataArray()[:]+=2000 + fmts1.pushBackTimeStep(f1ts2) + ### fmts2 + fmts2=MEDFileFieldMultiTS() + f1ts3=MEDFileField1TS() + f2_1=MEDCouplingFieldDouble(ON_CELLS) ; f2_1.setMesh(mm2[0]) ; f2_1.setName(fieldName) + arr4=DataArrayDouble([(50,150),(51,151),(52,152),(53,153)]) + arr4.setInfoOnComponents(infoc) + f2_1.setArray(arr4) ; f2_1.setTime(*t1) ; f2_1.setTimeUnit("ms") + f2_1.checkConsistencyLight() + f1ts3.setFieldNoProfileSBT(f2_1) + f2_2=MEDCouplingFieldDouble(ON_CELLS) ; f2_2.setMesh(mm2[-1]) ; f2_2.setName(fieldName) + arr5=DataArrayDouble([(54,154),(55,155),(56,156),(57,157),(158,158),(59,159),(60,160),(61,161)]) + arr5.setInfoOnComponents(infoc) + f2_2.setArray(arr5) ; f2_2.setTime(*t1) ; f2_2.setTimeUnit("ms") + f2_2.checkConsistencyLight() + f1ts3.setFieldNoProfileSBT(f2_2) + f2_3=MEDCouplingFieldDouble(ON_NODES) ; f2_3.setMesh(mm2[0]) ; f2_3.setName(fieldName) + arr6=DataArrayDouble([(62,162),(63,163),(64,164),(65,165),(66,166)]) + arr6.setInfoOnComponents(infoc) + f2_3.setArray(arr6) ; f2_3.setTime(*t1) ; f2_3.setTimeUnit("ms") + f2_3.checkConsistencyLight() + f1ts3.setFieldNoProfileSBT(f2_3) + fmts2.pushBackTimeStep(f1ts3) + # + f1ts4=f1ts3.deepCopy() + f1ts4.setTime(t2[1],t2[2],t2[0]) + f1ts4.getUndergroundDataArray()[:]+=2000 + fmts2.pushBackTimeStep(f1ts4) + # + mfd1=MEDFileData() + mfd1.setMeshes(MEDFileMeshes()) + mfd1.getMeshes().pushMesh(mm1) + mfd1.setFields(MEDFileFields()) + mfd1.getFields().pushField(fmts1) + # + mfd2=MEDFileData() + mfd2.setMeshes(MEDFileMeshes()) + mfd2.getMeshes().pushMesh(mm2) + mfd2.setFields(MEDFileFields()) + mfd2.getFields().pushField(fmts2) + # ze Call ! + mfd=MEDFileData.Aggregate([mfd1,mfd2]) + def CheckMFD(tester,mfd): + tester.assertEqual(len(mfd.getMeshes()),1) + tester.assertEqual(len(mfd.getFields()),1) + CheckMesh(self,mfd.getMeshes()[0]) + tester.assertEqual(len(mfd.getFields()[0]),2) + zeF1=mfd.getFields()[0][0] + zeF1_1=zeF1.getFieldOnMeshAtLevel(ON_CELLS,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_1,f2_1]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + tester.assertTrue(ref.isEqual(zeF1_1,1e-12,1e-12)) + zeF1_2=zeF1.getFieldOnMeshAtLevel(ON_CELLS,-1,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_2,f2_2]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + tester.assertTrue(ref.isEqual(zeF1_2,1e-12,1e-12)) + zeF1_3=zeF1.getFieldOnMeshAtLevel(ON_NODES,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_3,f2_3]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + tester.assertTrue(ref.isEqual(zeF1_3,1e-12,1e-12)) + # + zeF2=mfd.getFields()[0][1] + zeF2_1=zeF2.getFieldOnMeshAtLevel(ON_CELLS,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_1,f2_1]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + ref.setTime(*t2) ; ref.getArray()[:]+=2000 + tester.assertTrue(ref.isEqual(zeF2_1,1e-12,1e-12)) + zeF2_2=zeF2.getFieldOnMeshAtLevel(ON_CELLS,-1,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_2,f2_2]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + ref.setTime(*t2) ; ref.getArray()[:]+=2000 + tester.assertTrue(ref.isEqual(zeF2_2,1e-12,1e-12)) + zeF2_3=zeF2.getFieldOnMeshAtLevel(ON_NODES,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_3,f2_3]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + ref.setTime(*t2) ; ref.getArray()[:]+=2000 + tester.assertTrue(ref.isEqual(zeF2_3,1e-12,1e-12)) + CheckMFD(self,mfd) + mfd1.write(fname1,2) ; mfd2.write(fname2,2) + mfd=MEDFileData.Aggregate([MEDFileData(fname1),MEDFileData(fname2)]) + CheckMFD(self,mfd) + pass + + def testExtrudedMesh1(self): + fname="Pyfile107.med" + arrX=DataArrayDouble([0,1,2,3]) ; arrY=DataArrayDouble([0,1,2,3,4]) ; arrZ=DataArrayDouble([0,1,2,3,4,5]) + mesh3D=MEDCouplingCMesh() ; mesh3D.setCoords(arrX,arrY,arrZ) ; mesh3D.setName("mesh") + ex=MEDCouplingMappedExtrudedMesh(mesh3D) + mm=MEDFileUMesh(ex) + mm.write(fname,2) + ex2=mm.convertToExtrudedMesh() + mm2=MEDFileMesh.New(fname) + ex3=mm2.convertToExtrudedMesh() + self.assertTrue(ex.isEqual(ex2,1e-12)) + self.assertTrue(ex.isEqual(ex3,1e-12)) + pass + + @unittest.skipUnless(LooseVersion(MEDFileVersionStr())>=LooseVersion('3.2.1'),"This test requires at least MEDFile version 3.2.1") + def testWriteInto30(self): + fname="Pyfile108.med" + fname2="Pyfile109.med" + m=MEDCouplingUMesh("mesh",1) ; m.setCoords(DataArrayDouble([0,0,1,1],2,2)) ; m.allocateCells() ; m.insertNextCell(NORM_SEG2,[1,0]) + mm=MEDFileUMesh() ; mm[0]=m + mm.setFamilyId("FAMILLE_ZERO",0) + # + mm.write30(fname,2) + assert(LooseVersion(MEDFileVersionOfFileStr(fname)).version[:2]==[3,0]) # checks that just written MED file has a version == 3.0.x + mm2=MEDFileUMesh(fname) + self.assertTrue(mm.isEqual(mm2,1e-12)) + # + mm.write(fname2,2) + assert(LooseVersion(MEDFileVersionOfFileStr(fname2)).version[:2]==list(MEDFileVersion()[:2])) # checks that MED file version of written mesh is thoose of the current MED file lib + pass pass if __name__ == "__main__": - unittest.main() + unittest.main()