X-Git-Url: http://git.salome-platform.org/gitweb/?a=blobdiff_plain;f=src%2FMEDLoader%2FSwig%2FMEDLoaderTest3.py;h=bd37a82e26a481de2386700c0dbef689d8b30b85;hb=76dbe4d9a44823aca5e7e56b357d64d84db64f66;hp=4e94bc2739b07c34c9da5ae2fe311c1ab532e013;hpb=905c92980596014985fd81430408993ff0b67f52;p=tools%2Fmedcoupling.git diff --git a/src/MEDLoader/Swig/MEDLoaderTest3.py b/src/MEDLoader/Swig/MEDLoaderTest3.py index 4e94bc273..bd37a82e2 100644 --- a/src/MEDLoader/Swig/MEDLoaderTest3.py +++ b/src/MEDLoader/Swig/MEDLoaderTest3.py @@ -1,5 +1,5 @@ # -*- coding: iso-8859-1 -*- -# Copyright (C) 2007-2014 CEA/DEN, EDF R&D +# Copyright (C) 2007-2016 CEA/DEN, EDF R&D # # This library is free software; you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public @@ -21,10 +21,12 @@ from MEDLoader import * import unittest +import platform from math import pi,e,sqrt from MEDLoaderDataForTest import MEDLoaderDataForTest +from distutils.version import LooseVersion -class MEDLoaderTest(unittest.TestCase): +class MEDLoaderTest3(unittest.TestCase): def testMEDMesh1(self): fileName="Pyfile18.med" mname="ExampleOfMultiDimW" @@ -32,10 +34,10 @@ class MEDLoaderTest(unittest.TestCase): self.assertRaises(InterpKernelException,MEDFileMesh.New,fileName,"") self.assertEqual((0,-1),medmesh.getNonEmptyLevels()) m1_0=medmesh.getLevel0Mesh(True) - m1_1=MEDLoader.ReadUMeshFromFile(fileName,mname,0) + m1_1=ReadUMeshFromFile(fileName,mname,0) self.assertTrue(m1_0.isEqual(m1_1,1e-12)); m2_0=medmesh.getLevelM1Mesh(True) - m2_1=MEDLoader.ReadUMeshFromFile(fileName,mname,-1) + m2_1=ReadUMeshFromFile(fileName,mname,-1) self.assertTrue(m2_0.isEqual(m2_1,1e-12)); pass @@ -46,23 +48,23 @@ class MEDLoaderTest(unittest.TestCase): medmesh=MEDFileUMesh.New(fileName,mname) self.assertEqual((0,),medmesh.getNonEmptyLevels()) m1_0=medmesh.getLevel0Mesh(True) - m1_1=MEDLoader.ReadUMeshFromFile(fileName,mname,0) + m1_1=ReadUMeshFromFile(fileName,mname,0) self.assertTrue(m1_0.isEqual(m1_1,1e-12)); g1_0=medmesh.getGroup(0,"mesh2",True) - g1_1=MEDLoader.ReadUMeshFromGroups(fileName,mname,0,["mesh2"]); + g1_1=ReadUMeshFromGroups(fileName,mname,0,["mesh2"]); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getGroup(0,"mesh3",True) - g1_1=MEDLoader.ReadUMeshFromGroups(fileName,mname,0,["mesh3"]); + g1_1=ReadUMeshFromGroups(fileName,mname,0,["mesh3"]); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getGroups(0,["mesh3","mesh2"]) - g1_1=MEDLoader.ReadUMeshFromGroups(fileName,mname,0,["mesh3","mesh2"]); + g1_1=ReadUMeshFromGroups(fileName,mname,0,["mesh3","mesh2"]); g1_1.setName(g1_0.getName()) self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getFamily(0,"Family_-3",True) - g1_1=MEDLoader.ReadUMeshFromFamilies(fileName,mname,0,["Family_-3"]); + g1_1=ReadUMeshFromFamilies(fileName,mname,0,["Family_-3"]); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); g1_0=medmesh.getFamilies(0,["Family_-3","Family_-5"],True) - g1_1=MEDLoader.ReadUMeshFromFamilies(fileName,mname,0,["Family_-3","Family_-5"]); + g1_1=ReadUMeshFromFamilies(fileName,mname,0,["Family_-3","Family_-5"]); g1_1.setName(g1_0.getName()) self.assertTrue(g1_0.isEqual(g1_1,1e-12)); self.assertTrue(g1_0.isEqual(g1_1,1e-12)); @@ -98,7 +100,7 @@ class MEDLoaderTest(unittest.TestCase): m.insertNextCell(NORM_POLYGON,4,targetConn[14:18]) m.finishInsertingCells(); m.setCoords(c) - m.checkCoherency() + m.checkConsistencyLight() m1=MEDCouplingUMesh.New(); m1.setMeshDimension(1); m1.allocateCells(3); @@ -107,7 +109,7 @@ class MEDLoaderTest(unittest.TestCase): m1.insertNextCell(NORM_SEG3,3,[2,8,5]) m1.finishInsertingCells(); m1.setCoords(c) - m1.checkCoherency() + m1.checkConsistencyLight() m2=MEDCouplingUMesh.New(); m2.setMeshDimension(0); m2.allocateCells(4); @@ -117,7 +119,7 @@ class MEDLoaderTest(unittest.TestCase): m2.insertNextCell(NORM_POINT1,1,[6]) m2.finishInsertingCells(); m2.setCoords(c) - m2.checkCoherency() + m2.checkConsistencyLight() # mm=MEDFileUMesh.New() self.assertTrue(mm.getUnivNameWrStatus()) @@ -167,7 +169,7 @@ class MEDLoaderTest(unittest.TestCase): t=mm.getGroupArr(0,"GrpOnAllCell") self.assertTrue(t.getValues()==range(5)) # - mmCpy=mm.deepCpy() + mmCpy=mm.deepCopy() self.assertTrue(mm.isEqual(mmCpy,1e-12)[0]) ; del mm mmCpy.write(outFileName,2); # @@ -193,7 +195,7 @@ class MEDLoaderTest(unittest.TestCase): m.setName(mm.getName()) ; m.setDescription(mm.getDescription()) self.assertTrue(m.isEqual(mbis,1e-12)); # - self.assertEqual(([[(3, 2), (4, 1), (5, 8)], [(1, 2), (2, 1)], [(0, 4)]], 2, 2, 9),MEDLoader.GetUMeshGlobalInfo(outFileName,"MyFirstMEDCouplingMEDmesh")) + self.assertEqual(([[(3, 2), (4, 1), (5, 8)], [(1, 2), (2, 1)], [(0, 4)]], 2, 2, 9),GetUMeshGlobalInfo(outFileName,"MyFirstMEDCouplingMEDmesh")) pass # this test is the testMEDMesh3 except that permutation is dealed here @@ -215,7 +217,7 @@ class MEDLoaderTest(unittest.TestCase): m.insertNextCell(NORM_QUAD4,4,targetConn[14:18]) m.finishInsertingCells(); m.setCoords(c) - m.checkCoherency() + m.checkConsistencyLight() m1=MEDCouplingUMesh.New(); m1.setMeshDimension(1); m1.allocateCells(3); @@ -224,7 +226,7 @@ class MEDLoaderTest(unittest.TestCase): m1.insertNextCell(NORM_SEG2,2,[3,6]) m1.finishInsertingCells(); m1.setCoords(c) - m1.checkCoherency() + m1.checkConsistencyLight() m2=MEDCouplingUMesh.New(); m2.setMeshDimension(0); m2.allocateCells(4); @@ -234,7 +236,7 @@ class MEDLoaderTest(unittest.TestCase): m2.insertNextCell(NORM_POINT1,1,[6]) m2.finishInsertingCells(); m2.setCoords(c) - m2.checkCoherency() + m2.checkConsistencyLight() # mm=MEDFileUMesh.New() mm.setName("My2ndMEDCouplingMEDmesh") @@ -333,6 +335,8 @@ class MEDLoaderTest(unittest.TestCase): da.setInfoOnComponent(0,"ZZ [um]") m1.setCoordsAt(2,da) m.setMesh(m1) + self.assertTrue(m[0].isEqual(m1,1e-12)) + self.assertTrue(isinstance(m[0],MEDCouplingCMesh)) m.setName("myFirstCartMesh") m.setDescription("mmmmpppppppp") m.setTimeValue(2.3) @@ -436,7 +440,7 @@ class MEDLoaderTest(unittest.TestCase): mm.write("Pyfile19_bis.med",2) ff=MEDFileFieldMultiTS.New("Pyfile19.med") ff.write("Pyfile19_bis.med",0) - self.assertEqual([('tyty','mm'),('uiop','MW')],MEDLoader.GetComponentsNamesOfField("Pyfile19_bis.med","VFieldOnNodes")) + self.assertEqual([('tyty','mm'),('uiop','MW')],GetComponentsNamesOfField("Pyfile19_bis.med","VFieldOnNodes")) pass #gauss points @@ -447,7 +451,7 @@ class MEDLoaderTest(unittest.TestCase): ff.write("Pyfile13_bis.med",0) ff=MEDFileField1TS.New("Pyfile13.med","MyFirstFieldOnGaussPoint",1,5) f=ff.getFieldAtLevel(ON_GAUSS_PT,0) - f2=MEDLoader.ReadFieldGauss("Pyfile13.med",'2DMesh_2',0,'MyFirstFieldOnGaussPoint',1,5) + f2=ReadFieldGauss("Pyfile13.med",'2DMesh_2',0,'MyFirstFieldOnGaussPoint',1,5) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) ff3=MEDFileField1TS.New("Pyfile13.med","MyFirstFieldOnGaussPoint") f3=ff3.getFieldAtLevel(ON_GAUSS_PT,0) @@ -465,7 +469,7 @@ class MEDLoaderTest(unittest.TestCase): ff.write("Pyfile14_bis.med",0) ff=MEDFileField1TS.New("Pyfile14.med","MyFieldOnGaussNE",1,5) f=ff.getFieldAtLevel(ON_GAUSS_NE,0) - f2=MEDLoader.ReadFieldGaussNE("Pyfile14.med",'2DMesh_2',0,"MyFieldOnGaussNE",1,5) + f2=ReadFieldGaussNE("Pyfile14.med",'2DMesh_2',0,"MyFieldOnGaussNE",1,5) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) pass @@ -473,14 +477,14 @@ class MEDLoaderTest(unittest.TestCase): def testMEDField5(self): ff=MEDFileField1TS.New("Pyfile17.med","MeasureOfMesh_Extruded",1,2) f=ff.getFieldAtLevel(ON_CELLS,0) - f2=MEDLoader.ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) + f2=ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) self.assertTrue(f.getMesh().getCoords().isEqual(f2.getMesh().getCoords(),1e-12)) f.getMesh().tryToShareSameCoords(f2.getMesh(),1e-12) f.changeUnderlyingMesh(f2.getMesh(),22,1e-12) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) # no with renumbering f=ff.getFieldAtLevel(ON_CELLS,0,1) - f2=MEDLoader.ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) + f2=ReadFieldCell("Pyfile17.med","Extruded",0,"MeasureOfMesh_Extruded",1,2) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) f=ff.getFieldAtLevel(ON_CELLS,0,3) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) @@ -496,12 +500,12 @@ class MEDLoaderTest(unittest.TestCase): its=ff.getIterations() self.assertRaises(InterpKernelException,ff.getFieldAtLevel,ON_CELLS,its[0][0],its[0][1],0)# request on cell and it is not on cells f=ff.getFieldAtLevel(ON_NODES,its[0][0],its[0][1],0) - f2=MEDLoader.ReadFieldNode("Pyfile7.med",'3DSurfMesh_1',0,"VectorFieldOnNodes",its[0][0],its[0][1]) + f2=ReadFieldNode("Pyfile7.med",'3DSurfMesh_1',0,"VectorFieldOnNodes",its[0][0],its[0][1]) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) ff=MEDFileFieldMultiTS.New("Pyfile19.med","VFieldOnNodes") its=ff.getIterations() f=ff.getFieldAtLevel(ON_NODES,its[0][0],its[0][1],0) - f2=MEDLoader.ReadFieldNode("Pyfile19.med",'2DMesh_1',0,"VFieldOnNodes",its[0][0],its[0][1]) + f2=ReadFieldNode("Pyfile19.med",'2DMesh_1',0,"VFieldOnNodes",its[0][0],its[0][1]) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) self.assertRaises(InterpKernelException,ff.getFieldAtLevel,ON_CELLS,its[0][0],its[0][1],0)# request on cell and it is not on cells self.assertRaises(InterpKernelException,ff.getFieldAtLevel,ON_NODES,its[0][0],its[0][1],0,1)#request renumber following mesh : it is on profile ! @@ -512,7 +516,7 @@ class MEDLoaderTest(unittest.TestCase): ff=MEDFileFieldMultiTS.New("Pyfile12.med","VectorFieldOnCells") its=ff.getIterations() f=ff.getFieldAtLevel(ON_CELLS,its[0][0],its[0][1],0) - f2=MEDLoader.ReadFieldCell("Pyfile12.med",'3DMesh_1',0,"VectorFieldOnCells",its[0][0],its[0][1]) + f2=ReadFieldCell("Pyfile12.med",'3DMesh_1',0,"VectorFieldOnCells",its[0][0],its[0][1]) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) pass @@ -529,7 +533,7 @@ class MEDLoaderTest(unittest.TestCase): ff1=MEDFileField1TS.New() ff1.setFieldNoProfileSBT(f1) ff1.write(fname,0) - f2=MEDLoader.ReadFieldCell(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]); + f2=ReadFieldCell(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]); itt,orr,ti=ff1.getTime() self.assertEqual(0,itt); self.assertEqual(1,orr); self.assertAlmostEqual(2.,ti,14); self.assertTrue(f1.isEqual(f2,1e-12,1e-12)) @@ -554,7 +558,7 @@ class MEDLoaderTest(unittest.TestCase): nv=1456. da=ff1.getUndergroundDataArray().setIJ(0,0,nv) ff1.write(fname,0) - f2=MEDLoader.ReadFieldNode(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) + f2=ReadFieldNode(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) self.assertTrue(not f1.isEqual(f2,1e-12,1e-12)) f1.getArray().setIJ(0,0,nv) self.assertTrue(f1.isEqual(f2,1e-12,1e-12)) @@ -570,7 +574,7 @@ class MEDLoaderTest(unittest.TestCase): ff1=MEDFileField1TS.New() ff1.setFieldNoProfileSBT(f1) ff1.write(fname,0) - f2=MEDLoader.ReadFieldGaussNE(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) + f2=ReadFieldGaussNE(fname,f1.getMesh().getName(),0,f1.getName(),f1.getTime()[1],f1.getTime()[2]) self.assertTrue(f1.isEqual(f2,1e-12,1e-12)) da,infos=ff1.getUndergroundDataArrayExt() f2.getArray().setName(da.getName())#da has the same name than f2 @@ -579,9 +583,9 @@ class MEDLoaderTest(unittest.TestCase): # fname="Pyfile28.med" f1=MEDLoaderDataForTest.buildVecFieldOnGauss_2_Simpler(); - f1InvalidCpy=f1.deepCpy() + f1InvalidCpy=f1.deepCopy() f1InvalidCpy.setDiscretization(MEDCouplingFieldDiscretizationGauss()) - f1InvalidCpy2=f1.deepCpy() + f1InvalidCpy2=f1.deepCopy() f1InvalidCpy2.setDiscretization(MEDCouplingFieldDiscretizationGauss()) m1=f1.getMesh() mm1=MEDFileUMesh.New() @@ -641,7 +645,7 @@ class MEDLoaderTest(unittest.TestCase): f21=m2.getMeasureField(True) ; f21.setName("f21") ; f21=f21.buildNewTimeReprFromThis(ONE_TIME,False) f21.getArray().setInfoOnComponent(0,"sta [mm]") ; ff21.appendFieldNoProfileSBT(f21) - f22=f21.deepCpy() ; f22.setName("f22") ; f22=f22.buildNewTimeReprFromThis(ONE_TIME,False) ; + f22=f21.deepCopy() ; f22.setName("f22") ; f22=f22.buildNewTimeReprFromThis(ONE_TIME,False) ; f22.applyFunc(2,"3*x*IVec+2*x*JVec") f22.getArray().setInfoOnComponent(0,"distance [km]") ; f22.getArray().setInfoOnComponent(1,"displacement [cm]") ff22.appendFieldNoProfileSBT(f22) @@ -684,7 +688,7 @@ class MEDLoaderTest(unittest.TestCase): # ff1.setFieldProfile(f1,mm1,0,da) ff1.changePflsNames([(["sup1_NORM_QUAD4"],"ForV650")]) - ff1=ff1.deepCpy() + ff1=ff1.deepCopy() ff1.write(fname,0) # vals,pfl=ff1.getFieldWithProfile(ON_CELLS,0,mm1) ; vals.setName("") @@ -724,7 +728,7 @@ class MEDLoaderTest(unittest.TestCase): ff1.appendFieldProfile(f1,mm1,0,da) f1.setTime(1.2,1,2) ; e=d.applyFunc("2*x") ; e.copyStringInfoFrom(d) ; f1.setArray(e) ; ff1.appendFieldProfile(f1,mm1,0,da) - ff1=ff1.deepCpy() + ff1=ff1.deepCopy() ff1.write(fname,0) # vals,pfl=ff1.getFieldWithProfile(ON_CELLS,1,2,0,mm1) ; vals.setName("") @@ -888,8 +892,7 @@ class MEDLoaderTest(unittest.TestCase): ff1.write(fname,0) f1=ff1.getFieldOnMeshAtLevel(ON_GAUSS_NE,m1,0) f2,p1=ff1.getFieldWithProfile(ON_GAUSS_NE,0,mm1) ; f2.setName("") - self.assertTrue(p1.isIdentity()) - self.assertEqual(5,p1.getNumberOfTuples()) + self.assertTrue(p1.isIota(5)) self.assertTrue(f1.getArray().isEqual(f2,1e-12)) pass # Test for getFieldAtTopLevel method @@ -958,7 +961,7 @@ class MEDLoaderTest(unittest.TestCase): ff1.appendFieldProfile(f1,mm1,0,da) ffs.resize(1) ffs.setFieldAtPos(0,ff1) - ffs=ffs.deepCpy() + ffs=ffs.deepCopy() ffs.write(fname,0) # ffsr=MEDFileFields.New(fname) @@ -1054,7 +1057,7 @@ class MEDLoaderTest(unittest.TestCase): ff1.setFieldNoProfileSBT(f1) ff1.write(fname,0) # writing mesh1 and field1, now creation of mesh2 and field2 - f2=f1.deepCpy() + f2=f1.deepCopy() m2=f2.getMesh() m2.translate([0.5,0.6,0.7]) m2.setName("3DSurfMesh_2") @@ -1068,9 +1071,9 @@ class MEDLoaderTest(unittest.TestCase): ff2.setFieldNoProfileSBT(f2) ff2.write(fname,0) # - f3=MEDLoader.ReadFieldCell(fname,"3DSurfMesh_1",0,"VectorFieldOnCells",0,1) + f3=ReadFieldCell(fname,"3DSurfMesh_1",0,"VectorFieldOnCells",0,1) self.assertTrue(f3.isEqual(f1,1e-12,1e-12)) - f4=MEDLoader.ReadFieldCell(fname,"3DSurfMesh_2",0,"VectorFieldOnCells2",0,1) + f4=ReadFieldCell(fname,"3DSurfMesh_2",0,"VectorFieldOnCells2",0,1) self.assertTrue(f4.isEqual(f2,1e-12,1e-12)) pass @@ -1092,7 +1095,7 @@ class MEDLoaderTest(unittest.TestCase): da2.iota(7.) da2.rearrange(len(compNames1)) da2.setInfoOnComponents(compNames1) - f2=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f2.setName(FieldName1) ; f2.setArray(da2) ; f2.setMesh(m2) ; f2.checkCoherency() + f2=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f2.setName(FieldName1) ; f2.setArray(da2) ; f2.setMesh(m2) ; f2.checkConsistencyLight() ff1.setFieldNoProfileSBT(f2) self.assertEqual(ff1.getNonEmptyLevels(),(2, [0])) da0=DataArrayDouble.New() @@ -1100,7 +1103,7 @@ class MEDLoaderTest(unittest.TestCase): da0.iota(190.) da0.rearrange(len(compNames1)) da0.setInfoOnComponents(compNames1) - f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName1) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkCoherency() + f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName1) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkConsistencyLight() ff1.setFieldNoProfileSBT(f0) self.assertEqual(ff1.getNonEmptyLevels(),(2, [0,-2])) da1=DataArrayDouble.New() @@ -1108,7 +1111,7 @@ class MEDLoaderTest(unittest.TestCase): da1.iota(90.) da1.rearrange(len(compNames1)) da1.setInfoOnComponents(compNames1) - f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName1) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkCoherency() + f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName1) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkConsistencyLight() ff1.setFieldNoProfileSBT(f1) self.assertEqual(ff1.getNonEmptyLevels(),(2, [0,-1,-2])) # @@ -1122,7 +1125,7 @@ class MEDLoaderTest(unittest.TestCase): da0.iota(-190.) da0.rearrange(2) da0.setInfoOnComponents(compNames2) - f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName2) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkCoherency() + f0=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f0.setName(FieldName2) ; f0.setArray(da0) ; f0.setMesh(m0) ; f0.checkConsistencyLight() ff2.setFieldNoProfileSBT(f0) self.assertEqual(ff2.getNonEmptyLevels(),(0, [0])) da1=DataArrayDouble.New() @@ -1130,7 +1133,7 @@ class MEDLoaderTest(unittest.TestCase): da1.iota(-90.) da1.rearrange(len(compNames2)) da1.setInfoOnComponents(compNames2) - f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName2) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkCoherency() + f1=MEDCouplingFieldDouble.New(ON_CELLS,ONE_TIME) ; f1.setName(FieldName2) ; f1.setArray(da1) ; f1.setMesh(m1) ; f1.checkConsistencyLight() ff2.setFieldNoProfileSBT(f1) self.assertEqual(ff2.getNonEmptyLevels(),(1, [0,-1])) # @@ -1229,7 +1232,7 @@ class MEDLoaderTest(unittest.TestCase): pass pass - def testDuplicateNodesOnM1Group1(self): + def testBuildInnerBoundaryAlongM1Group1(self): fname="Pyfile44.med" m=MEDCouplingCMesh.New() m.setCoordsAt(0,DataArrayDouble.New([0.,1.1,2.3,3.6,5.,6.5])) @@ -1254,7 +1257,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(ref0,mm.getMeshAtLevel(0)[[12,13,14]].getNodalConnectivity().getValues()) self.assertEqual(ref1,mm.getMeshAtLevel(0)[[7,8,9]].getNodalConnectivity().getValues()) # - nodes,cells,cells2=mm.duplicateNodesOnM1Group("Grp") + nodes,cells,cells2=mm.buildInnerBoundaryAlongM1Group("Grp") self.assertEqual([15,16,17],nodes.getValues()); self.assertEqual([7,8,9],cells.getValues()); self.assertEqual([12,13,14],cells2.getValues()); @@ -1279,7 +1282,7 @@ class MEDLoaderTest(unittest.TestCase): mm.write(fname,2) pass - def testDuplicateNodesOnM1Group2(self): + def testBuildInnerBoundaryAlongM1Group2(self): fname="Pyfile45.med" m=MEDCouplingCMesh.New() m.setCoordsAt(0,DataArrayDouble.New([0.,1.1,2.3,3.6,5.,6.5])) @@ -1304,7 +1307,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(ref0,mm.getMeshAtLevel(0)[[12,13,14]].getNodalConnectivity().getValues()) self.assertEqual(ref1,mm.getMeshAtLevel(0)[[7,8]].getNodalConnectivity().getValues()) # - nodes,cells,cells2=mm.duplicateNodesOnM1Group("Grp") + nodes,cells,cells2=mm.buildInnerBoundaryAlongM1Group("Grp") self.assertEqual([15],nodes.getValues()); self.assertEqual([7,8],cells.getValues()); self.assertEqual([12,13],cells2.getValues()); @@ -1329,6 +1332,161 @@ class MEDLoaderTest(unittest.TestCase): mm.write(fname,2) pass + def testBuildInnerBoundaryAlongM1Group3(self): + """ Test buildInnerBoundaryAlongM1Group() with *non-connex* cracks """ + fname = "Pyfile73.med" + m = MEDCouplingCMesh.New() + m.setCoordsAt(0, DataArrayDouble([0.0,1.1,2.3,3.6,5.0])) + m.setCoordsAt(1, DataArrayDouble([0.,1.,2.])) + m = m.buildUnstructured(); m.setName("simple") + m2 = m.buildDescendingConnectivity()[0] + m2.setName(m.getName()) + + # A crack in two non connected parts of the mesh: + grpSeg = DataArrayInt([3,19]) ; grpSeg.setName("Grp") + + mm = MEDFileUMesh.New() + mm.setMeshAtLevel(0,m) + mm.setMeshAtLevel(-1,m2) + mm.setGroupsAtLevel(-1,[grpSeg]) + nodes, cellsMod, cellsNotMod = mm.buildInnerBoundaryAlongM1Group("Grp") + self.assertEqual([1,13],nodes.getValues()); + self.assertEqual([0,6],cellsMod.getValues()); + self.assertEqual([1,7],cellsNotMod.getValues()); + self.assertEqual(17,mm.getNumberOfNodes()) + self.assertEqual([3,19],mm.getGroupArr(-1,"Grp").getValues()) + self.assertEqual([22,23],mm.getGroupArr(-1,"Grp_dup").getValues()) + ref0=[4, 15, 0, 5, 6, 4, 8, 7, 12, 16] + ref1=[4, 2, 1, 6, 7, 4, 9, 8, 13, 14] + self.assertEqual(ref0,mm.getMeshAtLevel(0)[[0,6]].getNodalConnectivity().getValues()) + self.assertEqual(ref1,mm.getMeshAtLevel(0)[[1,7]].getNodalConnectivity().getValues()) + self.assertRaises(InterpKernelException,mm.getGroup(-1,"Grp_dup").checkGeoEquivalWith,mm.getGroup(-1,"Grp"),2,1e-12);# Grp_dup and Grp are not equal considering connectivity only + mm.getGroup(-1,"Grp_dup").checkGeoEquivalWith(mm.getGroup(-1,"Grp"),12,1e-12)# Grp_dup and Grp are equal considering connectivity and coordinates + + refValues=DataArrayDouble([1.1, 1.2, 1.3, 1.4, 1.1, 1.2, 1.3, 1.4]) + valsToTest=mm.getMeshAtLevel(0).getMeasureField(True).getArray() ; delta=(valsToTest-refValues) ; delta.abs() + self.assertTrue(delta.getMaxValue()[0]<1e-10) + # + mm.getCoords()[-len(nodes):]+=[0.,-0.3] + self.assertRaises(InterpKernelException,mm.getGroup(-1,"Grp_dup").checkGeoEquivalWith,mm.getGroup(-1,"Grp"),12,1e-12); + refValues2=refValues[:] ; refValues2[0] = 1.265; refValues2[6] = 1.105 + valsToTest=mm.getMeshAtLevel(0).getMeasureField(True).getArray() ; delta=(valsToTest-refValues2) ; delta.abs() + self.assertTrue(delta.getMaxValue()[0]<1e-12) + mm.write(fname,2) + + def testBuildInnerBoundaryAlongM1Group4(self): + """ Test case where cells touch the M1 group on some nodes only and not on full egdes (triangle mesh for ex) + """ + coo = DataArrayDouble([0.,0., 1.,0., 2.,0., 3.,0., + 0.,1., 1.,1., 2.,1., 3.,1., + 0.,2., 1.,2., 2.,2., 3.,2.], 12, 2) + conn = [3,0,4,1, 3,1,4,5, + 3,5,9,10, 3,5,10,6, + 3,2,6,7, 3,2,7,3, + 3,4,8,9, 3,4,9,5, + 3,1,5,6, 3,1,6,2, + 3,6,10,11,3,6,11,7] + # Only TRI3: + connI = DataArrayInt() + connI.alloc(13, 1); connI.iota(); connI *= 4 + m2 = MEDCouplingUMesh("2D", 2) + m2.setCoords(coo) + m2.setConnectivity(DataArrayInt(conn), connI) + m2.checkConsistency() + m1, _, _, _, _ = m2.buildDescendingConnectivity() + grpIds = DataArrayInt([9,11]); grpIds.setName("group") + grpIds2 = DataArrayInt([0,1]); grpIds2.setName("group2") + mfu = MEDFileUMesh() + mfu.setMeshAtLevel(0, m2) + mfu.setMeshAtLevel(-1, m1) + mfu.setGroupsAtLevel(-1, [grpIds, grpIds2]) + nNod = m2.getNumberOfNodes() + nodesDup, cells1, cells2 = mfu.buildInnerBoundaryAlongM1Group("group") + m2_bis = mfu.getMeshAtLevel(0) + m2_bis.checkConsistency() + m1_bis = mfu.getMeshAtLevel(-1) + m1_bis.checkConsistency() + self.assertEqual(nNod+2, mfu.getNumberOfNodes()) + self.assertEqual(nNod+2, m2_bis.getNumberOfNodes()) + self.assertEqual(nNod+2, m1_bis.getNumberOfNodes()) + self.assertEqual([6,7], nodesDup.getValues()) + self.assertEqual([2.,1., 3.,1.], m2_bis.getCoords()[nNod:].getValues()) + self.assertEqual(set([3,10,11]), set(cells1.getValues())) + self.assertEqual(set([8,9,4,5]), set(cells2.getValues())) + self.assertEqual([9,11],mfu.getGroupArr(-1,"group").getValues()) + self.assertEqual([23,24],mfu.getGroupArr(-1,"group_dup").getValues()) + self.assertEqual([0,1],mfu.getGroupArr(-1,"group2").getValues()) +# mfu.getMeshAtLevel(0).writeVTK("/tmp/mfu_M0.vtu") + ref0 =[3, 5, 10, 12, 3, 12, 10, 11, 3, 12, 11, 13] + ref1 =[3, 2, 6, 7, 3, 2, 7, 3, 3, 1, 5, 6, 3, 1, 6, 2] + self.assertEqual(ref0,mfu.getMeshAtLevel(0)[[3,10,11]].getNodalConnectivity().getValues()) + self.assertEqual(ref1,mfu.getMeshAtLevel(0)[[4,5,8,9]].getNodalConnectivity().getValues()) + self.assertRaises(InterpKernelException,mfu.getGroup(-1,"group_dup").checkGeoEquivalWith,mfu.getGroup(-1,"group"),2,1e-12) # Grp_dup and Grp are not equal considering connectivity only + mfu.getGroup(-1,"group_dup").checkGeoEquivalWith(mfu.getGroup(-1,"group"),12,1e-12)# Grp_dup and Grp are equal considering connectivity and coordinates + m_bis0 = mfu.getMeshAtLevel(-1) + m_desc, _, _, _, _ = m_bis0.buildDescendingConnectivity() + m_bis0.checkDeepEquivalOnSameNodesWith(mfu.getMeshAtLevel(-1), 2, 9.9999999) + + def testBuildInnerBoundary5(self): + """ Full 3D test with tetras only. In this case a tri from the group is not duplicated because it is made only + of non duplicated nodes. The tri in question is hence not part of the final new "dup" group. """ + coo = DataArrayDouble([200.0, 200.0, 0.0, 200.0, 200.0, 200.0, 200.0, 0.0, 200.0, 200.0, 0.0, 0.0, 0.0, 200.0, 0.0, 0.0, 200.0, 200.0, 0.0, 0.0, 0.0, 0.0, 0.0, + 200.0, 400.0, 200.0, 0.0, 400.0, 200.0, 200.0, 400.0, 0.0, 0.0, 400.0, 0.0, 200.0, 0.0, 100.00000000000016, 200.0, 63.15203310314546, 200.0, 200.0, 134.45205700643342, + 200.0, 200.0, 200.0, 100.00000000000016, 200.0, 63.15203310314546, 0.0, 200.0, 134.45205700643342, 0.0, 200.0, 0.0, 100.00000000000016, 0.0, 63.15203310314546, + 200.0, 0.0, 134.45205700643342, 200.0, 0.0, 200.0, 100.00000000000016, 0.0, 63.15203310314546, 0.0, 0.0, 134.45205700643342, 0.0, 0.0, 200.0, 200.0, 100.02130053568538, + 0.0, 200.0, 100.00938163175135, 200.0, 0.0, 100.02130053568538, 0.0, 0.0, 100.00938163175135, 299.3058739933347, 200.0, 200.0, 400.0, 98.68100542924483, + 200.0, 302.8923433403344, 0.0, 200.0, 302.8923433403344, 200.0, 0.0, 400.0, 100.00000000000016, 0.0, 302.8923433403344, 0.0, 0.0, 400.0, 200.0, 98.55126825835082, + 400.0, 0.0, 100.02162286181577, 99.31624553977466, 99.99999998882231, 200.0, 99.31624576683302, 100.00000010178034, 0.0, 99.31624560596512, 200.0, 100.0050761312483, + 99.31624560612883, 0.0, 100.00507613125338, 200.0, 99.99999995813045, 100.00950673487786, 0.0, 99.99999989928207, 100.0041870621175, 301.29063354383015, + 100.0000000093269, 0.0, 301.29063360689975, 0.0, 100.00957769061164, 140.52853868782435, 99.99999963972768, 100.00509135751312, 297.87779091770784, + 97.16750463405486, 97.18018457127863], 46, 3) + c0 = [14, 45, 31, 21, 42, 14, 37, 38, 20, 44, 14, 39, 36, 41, 44, 14, 5, 25, 12, 13, 14, 38, 36, 44, 41, 14, 21, 20, 24, 44, 14, 38, 25, 41, 19, 14, 37, 38, 44, 41, 14, 16, 27, + 39, 41, 14, 21, 45, 26, 40, 14, 39, 37, 44, 41, 14, 14, 15, 24, 44, 14, 25, 38, 41, 13, 14, 27, 18, 6, 22, 14, 38, 36, 41, 13, 14, 44, 14, 15, 36, 14, 44, 23, 39, 26, 14, + 21,26, 23, 44, 14, 38, 44, 14, 24, 14, 39, 37, 41, 22, 14, 21, 33, 45, 42, 14, 27, 22, 39, 41, 14, 23, 26, 21, 3, 14, 27, 18, 22, 41, 14, 39, 36, 44, 17, 14, 21, 26, 44, 40, + 14, 39, 37, 22, 23, 14, 37, 38, 41, 19, 14, 25, 12, 13, 41, 14, 30, 26, 43, 45, 14, 38, 36, 13, 14, 14, 12, 36, 13, 41, 14, 20, 44, 21, 37, 14, 16, 36, 12, 41, 14, 39, 36, + 17, 16, 14, 44, 20, 24, 38, 14, 27, 16, 12, 41, 14, 26, 15, 17, 44, 14, 19, 18, 41, 37, 14, 40, 45, 26, 15, 14, 37, 38, 19, 20, 14, 17, 15, 26, 2, 14, 39, 36, 16, 41, 14, + 24, 21, 44, 40, 14, 16, 7, 27, 12, 14, 22, 18, 37, 41, 14, 21, 31, 45, 24, 14, 44, 40, 15, 24, 14, 24, 45, 15, 28, 14, 44, 40, 26, 15, 14, 24, 20, 21, 0, 14, 38, 36, 14, + 44, 14, 39, 37, 23, 44, 14, 45, 31, 42, 32, 14, 25, 18, 19, 4, 14, 36, 44, 17, 15, 14, 25, 19, 18, 41, 14, 24, 15, 14, 1, 14, 45, 24, 34, 28, 14, 35, 45, 30, 43, 14, 17, + 44, 39, 26, 14, 44, 23, 21, 37, 14, 30, 45, 29, 15, 14, 45, 35, 33, 43, 14, 30, 15, 26, 45, 14, 31, 21, 0, 24, 14, 33, 35, 32, 10, 14, 29, 45, 34, 28, 14, 32, 45, 34, + 29, 14, 45, 31, 32, 34, 14, 33, 26, 45, 43, 14, 45, 31, 34, 24, 14, 33, 26, 21, 45, 14, 11, 30, 35, 29, 14, 33, 35, 45, 32, 14, 33, 45, 42, 32, 14, 32, 8, 34, 31, 14, + 21, 26, 33, 3, 14, 35, 45, 32, 29, 14, 29, 34, 9, 28, 14, 15, 45, 24, 40, 14, 29, 45, 28, 15, 14, 21, 24, 45, 40, 14, 24, 15, 1, 28, 14, 35, 45, 29, 30, 14, 26, 15, + 30, 2] + cI0 = [0, 5, 10, 15, 20, 25, 30, 35, 40, 45, 50, 55, 60, 65, 70, 75, 80, 85, 90, 95, 100, 105, 110, 115, 120, 125, 130, 135, 140, 145, 150, 155, 160, 165, 170, 175, 180, 185, + 190, 195, 200, 205, 210, 215, 220, 225, 230, 235, 240, 245, 250, 255, 260, 265, 270, 275, 280, 285, 290, 295, 300, 305, 310, 315, 320, 325, 330, 335, 340, 345, 350, 355, + 360, 365, 370, 375, 380, 385, 390, 395, 400, 405, 410, 415, 420, 425, 430] + m3 = MEDCouplingUMesh("3D", 3) + m3.setCoords(coo) + m3.setConnectivity(DataArrayInt(c0), DataArrayInt(cI0)) + m3.checkConsistency() + m2, _, _, _, _ = m3.buildDescendingConnectivity() + grpIds = DataArrayInt([36,74]); grpIds.setName("group") + mfu = MEDFileUMesh() + mfu.setMeshAtLevel(0, m3) + mfu.setMeshAtLevel(-1, m2) + grpIds3D = DataArrayInt([0,1]); grpIds3D.setName("group_3d") + mfu.setGroupsAtLevel(0, [grpIds3D]) # just to check preservation of 3D group + mfu.setGroupsAtLevel(-1, [grpIds]) + nNod = m3.getNumberOfNodes() + nodesDup, cells1, cells2 = mfu.buildInnerBoundaryAlongM1Group("group") + m3_bis = mfu.getMeshAtLevel(0) + m3_bis.checkConsistency() + m2_bis = mfu.getMeshAtLevel(-1) + m2_bis.checkConsistency() + self.assertEqual(nNod+1, mfu.getNumberOfNodes()) + self.assertEqual(nNod+1, m3_bis.getNumberOfNodes()) + self.assertEqual(nNod+1, m2_bis.getNumberOfNodes()) + self.assertEqual([3], nodesDup.getValues()) + self.assertEqual(m3_bis.getCoords()[3].getValues(), m3_bis.getCoords()[nNod:].getValues()) + self.assertEqual(set([22]), set(cells1.getValues())) + self.assertEqual(set([77]), set(cells2.getValues())) + self.assertEqual([36,74],mfu.getGroupArr(-1,"group").getValues()) + self.assertEqual([0,1],mfu.getGroupArr(0,"group_3d").getValues()) + self.assertEqual([213],mfu.getGroupArr(-1,"group_dup").getValues()) # here only one cell has been duplicated + m_bis0 = mfu.getMeshAtLevel(-1) + m_desc, _, _, _, _ = m_bis0.buildDescendingConnectivity() + m_bis0.checkDeepEquivalOnSameNodesWith(mfu.getMeshAtLevel(-1), 2, 9.9999999) + pass + def testBasicConstructors(self): fname="Pyfile18.med" m=MEDFileMesh.New(fname) @@ -1389,8 +1547,8 @@ class MEDLoaderTest(unittest.TestCase): fread=ff2.getFieldOnMeshAtLevel(ON_CELLS,0,mm) fread2=ff2.getFieldAtLevel(ON_CELLS,0) # - fread.checkCoherency() - fread2.checkCoherency() + fread.checkConsistencyLight() + fread2.checkConsistencyLight() self.assertTrue(fread.isEqual(f1,1e-12,1e-12)) self.assertTrue(fread2.isEqual(f1,1e-12,1e-12)) pass @@ -1499,7 +1657,7 @@ class MEDLoaderTest(unittest.TestCase): tr=[[0.,4.],[2.,4.],[4.,4.],[6.,4.],[8.,4.],[10.,4.],[12.,4.],[14.,4.],[16.,4.],[18.,4.],[20.,4.],[0.,0.],[2.,0.], [0.,2.],[2.,2.],[4.,2.],[6.,2.],[8.,2.],[10.,2.],[12.,2.]] ms=11*[mT3]+2*[mQ4]+7*[mQ8] - ms[:]=(elt.deepCpy() for elt in ms) + ms[:]=(elt.deepCopy() for elt in ms) for m,t in zip(ms,tr): d=m.getCoords() ; d+= t pass @@ -1514,12 +1672,12 @@ class MEDLoaderTest(unittest.TestCase): da=DataArrayDouble(34) ; da.iota(3.) f.setArray(da) f.setName("fieldCellOnPflWithoutPfl") - fInvalid=f.deepCpy() + fInvalid=f.deepCopy() f.setGaussLocalizationOnCells([0,1,2,3,4,5,6,7,8],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7],[0.8,0.2]) f.setGaussLocalizationOnCells([9,10],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7,0.8,0.8],[0.8,0.07,0.13]) f.setGaussLocalizationOnCells([11,12],[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8,0.8,0.8],[0.8,0.07,0.1,0.01,0.02]) - f.checkCoherency() - fInvalid2=fInvalid.deepCpy() + f.checkConsistencyLight() + fInvalid2=fInvalid.deepCopy() fInvalid2.getDiscretization().setArrayOfDiscIds(f.getDiscretization().getArrayOfDiscIds()) # mm=MEDFileUMesh() @@ -1548,12 +1706,12 @@ class MEDLoaderTest(unittest.TestCase): f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) f2=f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) self.assertTrue(f.isEqual(f2,1e-12,1e-12)) - f2_bis=MEDLoader.ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) - f2_bis.checkCoherency() + f2_bis=ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + f2_bis.checkConsistencyLight() self.assertTrue(f.isEqual(f2_bis,1e-12,1e-12)) # - MEDLoader.WriteField(fname2,f,True) - f2_ter=MEDLoader.ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + WriteField(fname2,f,True) + f2_ter=ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) self.assertTrue(f.isEqual(f2_ter,1e-12,1e-12)) ## Use case 2 : Pfl on part tri3 with 2 disc and on part quad8 with 1 disc f=MEDCouplingFieldDouble.New(ON_GAUSS_PT,ONE_TIME) @@ -1567,7 +1725,7 @@ class MEDLoaderTest(unittest.TestCase): f.setGaussLocalizationOnCells([0,1,3],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7],[0.8,0.2]) f.setGaussLocalizationOnCells([2,4,5],[0.,0.,1.,0.,1.,1.],[0.3,0.3,0.7,0.7,0.8,0.8],[0.8,0.07,0.13]) f.setGaussLocalizationOnCells([6,7,8,9],[0.,0.,1.,0.,1.,1.,0.,1.,0.5,0.,1.,0.5,0.5,1.,0.,0.5],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8,0.8,0.8],[0.8,0.07,0.1,0.01,0.02]) - f.checkCoherency() + f.checkConsistencyLight() # mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) @@ -1586,12 +1744,12 @@ class MEDLoaderTest(unittest.TestCase): f3=f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) f3.renumberCells([0,1,3,2,4,5,6,7,8,9]) self.assertTrue(f.isEqual(f3,1e-12,1e-12)) - f3_bis=MEDLoader.ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + f3_bis=ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_bis.renumberCells([0,1,3,2,4,5,6,7,8,9]) self.assertTrue(f.isEqual(f3_bis,1e-12,1e-12)) # - MEDLoader.WriteField(fname2,f,True) - f3_ter=MEDLoader.ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + WriteField(fname2,f,True) + f3_ter=ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_ter.renumberCells([0,1,3,2,4,5,6,7,8,9]) self.assertTrue(f.isEqual(f3_ter,1e-12,1e-12)) ## Use case 3 : no pfl but creation of pfls due to gauss pts @@ -1606,7 +1764,7 @@ class MEDLoaderTest(unittest.TestCase): f.setGaussLocalizationOnCells([11,12],[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8,0.8,0.8],[0.8,0.07,0.1,0.01,0.02]) f.setGaussLocalizationOnCells([13,14,15,17,18],[0.,0.,1.,0.,1.,1.,0.,1.,0.5,0.,1.,0.5,0.5,1.,0.,0.5],[0.3,0.3,0.7,0.7,0.8,0.8,0.8,0.8],[0.8,0.1,0.03,0.07]) f.setGaussLocalizationOnCells([16,19],[0.,0.,1.,0.,1.,1.,0.,1.,0.5,0.,1.,0.5,0.5,1.,0.,0.5],[0.3,0.3,0.7,0.7,0.8,0.8],[0.8,0.1,0.1]) - f.checkCoherency() + f.checkConsistencyLight() mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) f1ts=MEDFileField1TS.New() @@ -1625,12 +1783,12 @@ class MEDLoaderTest(unittest.TestCase): f3=f1tsRead.getFieldOnMeshAtLevel(ON_GAUSS_PT,0,mRead) f3.renumberCells([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,17,18,16,19]) self.assertTrue(f.isEqual(f3,1e-12,1e-12)) - f3_bis=MEDLoader.ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + f3_bis=ReadFieldGauss(fname,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_bis.renumberCells([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,17,18,16,19]) self.assertTrue(f.isEqual(f3_bis,1e-12,1e-12)) # - MEDLoader.WriteField(fname2,f,True) - f3_ter=MEDLoader.ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) + WriteField(fname2,f,True) + f3_ter=ReadFieldGauss(fname2,m.getName(),0,f.getName(),f.getTime()[1],f.getTime()[2]) f3_ter.renumberCells([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,17,18,16,19]) self.assertTrue(f.isEqual(f3_ter,1e-12,1e-12)) pass @@ -1684,36 +1842,36 @@ class MEDLoaderTest(unittest.TestCase): ## Reading from file m=MEDFileMesh.New(fname) m0=m.getMeshAtLevel(0) - m00=m0.deepCpy() ; m00=m00[[0,2]] ; m00.setName(m.getName()) ; m00.zipCoords() + m00=m0.deepCopy() ; m00=m00[[0,2]] ; m00.setName(m.getName()) ; m00.zipCoords() fieldNode0.setMesh(m00) f0=MEDFileField1TS.New(fname,fieldNode0.getName(),dt,it) ff0_1=f0.getFieldOnMeshAtLevel(ON_NODES,m0) - ff0_1.checkCoherency() + ff0_1.checkConsistencyLight() self.assertTrue(ff0_1.isEqual(fieldNode0,1e-12,1e-12)) ff0_2=f0.getFieldAtLevel(ON_NODES,0) - ff0_2.checkCoherency() + ff0_2.checkConsistencyLight() self.assertTrue(ff0_2.isEqual(fieldNode0,1e-12,1e-12)) ff0_3=f0.getFieldOnMeshAtLevel(ON_NODES,0,m) - ff0_3.checkCoherency() + ff0_3.checkConsistencyLight() self.assertTrue(ff0_3.isEqual(fieldNode0,1e-12,1e-12)) - ff0_4=MEDLoader.ReadFieldNode(fname,m.getName(),0,fieldNode0.getName(),dt,it) - ff0_4.checkCoherency() + ff0_4=ReadFieldNode(fname,m.getName(),0,fieldNode0.getName(),dt,it) + ff0_4.checkConsistencyLight() self.assertTrue(ff0_4.isEqual(fieldNode0,1e-12,1e-12)) f1=MEDFileField1TS.New(fname,fieldNode1.getName(),dt,it) m1=m.getMeshAtLevel(-1) - m10=m1.deepCpy() ; m10=m10[[0,1,2,3,4,5,6,7]] ; m10.setName(m.getName()) ; m10.zipCoords() + m10=m1.deepCopy() ; m10=m10[[0,1,2,3,4,5,6,7]] ; m10.setName(m.getName()) ; m10.zipCoords() fieldNode1.setMesh(m10) ff1_1=f1.getFieldOnMeshAtLevel(ON_NODES,m1) - ff1_1.checkCoherency() + ff1_1.checkConsistencyLight() self.assertTrue(ff1_1.isEqual(fieldNode1,1e-12,1e-12)) ff1_2=f1.getFieldAtLevel(ON_NODES,-1) - ff1_2.checkCoherency() + ff1_2.checkConsistencyLight() self.assertTrue(ff1_2.isEqual(fieldNode1,1e-12,1e-12)) ff1_3=f1.getFieldOnMeshAtLevel(ON_NODES,-1,m) - ff1_3.checkCoherency() + ff1_3.checkConsistencyLight() self.assertTrue(ff1_3.isEqual(fieldNode1,1e-12,1e-12)) - ff1_4=MEDLoader.ReadFieldNode(fname,m.getName(),-1,fieldNode1.getName(),dt,it) - ff1_4.checkCoherency() + ff1_4=ReadFieldNode(fname,m.getName(),-1,fieldNode1.getName(),dt,it) + ff1_4.checkConsistencyLight() self.assertTrue(ff1_4.getMesh().isEqual(m10,1e-12)) self.assertRaises(InterpKernelException,f1.getFieldOnMeshAtLevel,ON_NODES,m0) # error because impossible to build a sub mesh at level 0 lying on nodes [0,1,2,3,4,5,6] self.assertRaises(InterpKernelException,f1.getFieldAtLevel,ON_NODES,0) # error because impossible to build a sub mesh at level 0 lying on nodes [0,1,2,3,4,5,6] @@ -1774,36 +1932,36 @@ class MEDLoaderTest(unittest.TestCase): ## Reading from file m=MEDFileMesh.New(fname) m0=m.getMeshAtLevel(0) - m00=m0.deepCpy() ; m00=m00[pfl0] ; m00.setName(m.getName()) + m00=m0.deepCopy() ; m00=m00[pfl0] ; m00.setName(m.getName()) fieldCell0.setMesh(m00) f0=MEDFileField1TS.New(fname,fieldCell0.getName(),dt,it) ff0_1=f0.getFieldOnMeshAtLevel(ON_CELLS,m0) - ff0_1.checkCoherency() + ff0_1.checkConsistencyLight() self.assertTrue(ff0_1.isEqual(fieldCell0,1e-12,1e-12)) ff0_2=f0.getFieldAtLevel(ON_CELLS,0) - ff0_2.checkCoherency() + ff0_2.checkConsistencyLight() self.assertTrue(ff0_2.isEqual(fieldCell0,1e-12,1e-12)) ff0_3=f0.getFieldOnMeshAtLevel(ON_CELLS,0,m) - ff0_3.checkCoherency() + ff0_3.checkConsistencyLight() self.assertTrue(ff0_3.isEqual(fieldCell0,1e-12,1e-12)) - ff0_4=MEDLoader.ReadFieldCell(fname,m.getName(),0,fieldCell0.getName(),dt,it) - ff0_4.checkCoherency() + ff0_4=ReadFieldCell(fname,m.getName(),0,fieldCell0.getName(),dt,it) + ff0_4.checkConsistencyLight() self.assertTrue(ff0_4.isEqual(fieldCell0,1e-12,1e-12)) f1=MEDFileField1TS.New(fname,fieldCell1.getName(),dt,it) m1=m.getMeshAtLevel(-1) - m10=m1.deepCpy() ; m10=m10[pfl1] ; m10.setName(m.getName()) + m10=m1.deepCopy() ; m10=m10[pfl1] ; m10.setName(m.getName()) fieldCell1.setMesh(m10) ff1_1=f1.getFieldOnMeshAtLevel(ON_CELLS,m1) - ff1_1.checkCoherency() + ff1_1.checkConsistencyLight() self.assertTrue(ff1_1.isEqual(fieldCell1,1e-12,1e-12)) ff1_2=f1.getFieldAtLevel(ON_CELLS,-1) - ff1_2.checkCoherency() + ff1_2.checkConsistencyLight() self.assertTrue(ff1_2.isEqual(fieldCell1,1e-12,1e-12)) ff1_3=f1.getFieldOnMeshAtLevel(ON_CELLS,-1,m) - ff1_3.checkCoherency() + ff1_3.checkConsistencyLight() self.assertTrue(ff1_3.isEqual(fieldCell1,1e-12,1e-12)) - ff1_4=MEDLoader.ReadFieldCell(fname,m.getName(),-1,fieldCell1.getName(),dt,it) - ff1_4.checkCoherency() + ff1_4=ReadFieldCell(fname,m.getName(),-1,fieldCell1.getName(),dt,it) + ff1_4.checkConsistencyLight() self.assertTrue(ff1_4.getMesh().isEqual(m10,1e-12)) self.assertRaises(InterpKernelException,f1.getFieldOnMeshAtLevel,ON_CELLS,m0) # error because impossible to build a sub mesh at level 0 lying on cells [0,1,2,3,4,5,6] self.assertRaises(InterpKernelException,f1.getFieldAtLevel,ON_CELLS,0) # error because impossible to build a sub mesh at level 0 lying on cells [0,1,2,3,4,5,6] @@ -1852,7 +2010,7 @@ class MEDLoaderTest(unittest.TestCase): m1.setCoords(coo) ; m.setMeshAtLevel(-1,m1) m2.setCoords(coo) ; m.setMeshAtLevel(-2,m2) # - mm=m.deepCpy() + mm=m.deepCopy() famCoo=DataArrayInt([0,2,0,3,2,0,-1,0,0,0,0,-1,3]) ; mm.setFamilyFieldArr(1,famCoo) da0=DataArrayInt([0,0,0]) ; mm.setFamilyFieldArr(0,da0) da1=DataArrayInt([0,3]) ; mm.setFamilyFieldArr(-1,da1) @@ -1923,7 +2081,7 @@ class MEDLoaderTest(unittest.TestCase): m1.setCoords(coo) ; m.setMeshAtLevel(-1,m1) m2.setCoords(coo) ; m.setMeshAtLevel(-2,m2) # - mm=m.deepCpy() + mm=m.deepCopy() famCoo=DataArrayInt([0,2,0,3,2,0,-1,0,0,0,0,-1,3]) ; mm.setFamilyFieldArr(0,famCoo) da0=DataArrayInt([0,0,0]) ; mm.setFamilyFieldArr(1,da0) da1=DataArrayInt([0,3]) ; mm.setFamilyFieldArr(-1,da1) @@ -1990,25 +2148,25 @@ class MEDLoaderTest(unittest.TestCase): # mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) - self.assertIn(mm.getHeapMemorySize(),xrange(3889-100,3889+100+10*strMulFac)) + self.assertIn(mm.getHeapMemorySize(),xrange(3889-100,4225+100+10*strMulFac)) ff=MEDFileField1TS() ff.setFieldNoProfileSBT(f) - self.assertIn(ff.getHeapMemorySize(),xrange(771-40,771+21+(4+1)*strMulFac)) + self.assertIn(ff.getHeapMemorySize(),xrange(771-40,871+21+(4+1)*strMulFac)) # fff=MEDFileFieldMultiTS() fff.appendFieldNoProfileSBT(f) - self.assertIn(fff.getHeapMemorySize(),xrange(815-50,815+30+(6+2)*strMulFac)) + self.assertIn(fff.getHeapMemorySize(),xrange(815-50,915+30+(6+2)*strMulFac)) f.setTime(1.,0,-1) fff.appendFieldNoProfileSBT(f) - self.assertIn(fff.getHeapMemorySize(),xrange(1594-90,1594+50+(10+1)*strMulFac)) - self.assertIn(fff[0,-1].getHeapMemorySize(),xrange(771-40,771+20+(4+1)*strMulFac)) + self.assertIn(fff.getHeapMemorySize(),xrange(1594-90,1794+50+(10+1)*strMulFac)) + self.assertIn(fff[0,-1].getHeapMemorySize(),xrange(771-40,871+20+(4+1)*strMulFac)) f2=f[:50] f2.setTime(2.,1,-1) pfl=DataArrayInt.Range(0,50,1) ; pfl.setName("pfl") fff.appendFieldProfile(f2,mm,0,pfl) - self.assertIn(fff.getHeapMemorySize(),xrange(2348-130,2348+100+(10+2)*strMulFac)) + self.assertIn(fff.getHeapMemorySize(),xrange(2348-130,2608+100+(10+2)*strMulFac)) self.assertIn(fff.getProfile("pfl").getHeapMemorySize(),xrange(204-10,204+10+2*strMulFac)) - self.assertIn(fff[1,-1].getHeapMemorySize(),xrange(738-50,738+30+4*strMulFac)) + self.assertIn(fff[1,-1].getHeapMemorySize(),xrange(738-50,838+30+4*strMulFac)) pass def testCurveLinearMesh1(self): @@ -2022,7 +2180,7 @@ class MEDLoaderTest(unittest.TestCase): a1.iota(7.) ; a1.rearrange(3); mesh.setCoords(a1); mesh.setNodeGridStructure([4,5]); - mesh.checkCoherency(); + mesh.checkConsistencyLight(); # m=MEDFileCurveLinearMesh() m.setMesh(mesh) @@ -2063,15 +2221,15 @@ class MEDLoaderTest(unittest.TestCase): pts.setName("A") ; pts.setDescription("An example of parameter") ; pts.setTimeUnit("ms") pts.appendValue(1,2,3.4,567.89) pts.appendValue(2,3,5.6,999.123) - pts2=pts.deepCpy() ; pts2.setName("B") ; pts2.setDescription("A second example") + pts2=pts.deepCopy() ; pts2.setName("B") ; pts2.setDescription("A second example") p.pushParam(pts) ; p.pushParam(pts2) data.write(fname,2) p2=MEDFileParameters(fname) self.assertTrue(p.isEqual(p2,1e-14)[0]) self.assertAlmostEqual(p[1][1,2].getValue(),567.89,13) - p3=p.deepCpy() - pts4=pts2.deepCpy() - pts3=pts2.deepCpy() + p3=p.deepCopy() + pts4=pts2.deepCopy() + pts3=pts2.deepCopy() self.assertTrue(pts3.isEqual(pts2,1e-14)[0]) pts2.eraseTimeStepIds([0]) self.assertTrue(not pts3.isEqual(pts2,1e-14)[0]) @@ -2118,10 +2276,10 @@ class MEDLoaderTest(unittest.TestCase): namesCellL0=DataArrayAsciiChar(6,16) namesCellL0[:]=["CellL0#%.3d "%(i) for i in xrange(6)] mm.setNameFieldAtLevel(0,namesCellL0) - namesCellL1=DataArrayAsciiChar.Aggregate([namesCellL0,namesCellL0,namesCellL0.substr(2)]) + namesCellL1=DataArrayAsciiChar.Aggregate([namesCellL0,namesCellL0,namesCellL0.subArray(2)]) namesCellL1[:]=["CellLM1#%.3d "%(i) for i in xrange(16)] mm.setNameFieldAtLevel(-1,namesCellL1) - namesNodes=namesCellL1.substr(4,16) + namesNodes=namesCellL1.subArray(4,16) namesNodes[:]=["Node#%.3d "%(i) for i in xrange(12)] mm.setNameFieldAtLevel(1,namesNodes) mm.write(fname,2) @@ -2135,7 +2293,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(not mm.isEqual(mmr,1e-12)[0]) mmr.getNameFieldAtLevel(1).setIJ(0,0,'N') self.assertTrue(mm.isEqual(mmr,1e-12)[0]) - mmCpy=mm.deepCpy() + mmCpy=mm.deepCopy() self.assertTrue(mm.isEqual(mmCpy,1e-12)[0]) # remove names on nodes mmCpy.setNameFieldAtLevel(1,None) @@ -2166,7 +2324,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(not cc.isEqual(ccr,1e-12)[0]) ccr.getNameFieldAtLevel(1).setIJ(0,0,'N') self.assertTrue(cc.isEqual(ccr,1e-12)[0]) - ccCpy=cc.deepCpy() + ccCpy=cc.deepCopy() self.assertTrue(cc.isEqual(ccCpy,1e-12)[0]) pass @@ -2202,7 +2360,7 @@ class MEDLoaderTest(unittest.TestCase): c2.transformWithIndArr(whichGrp) splitOfM1=len(grps)*[None] for grpId,grp in enumerate(grps): - tmp=c2.getIdsEqual(grpId) + tmp=c2.findIdsEqual(grpId) splitOfM1[grpId]=tmp pass splitOfM1[0].isEqual(DataArrayInt([0,1,2,3,6,8,10,11,12,13])) @@ -2400,7 +2558,7 @@ class MEDLoaderTest(unittest.TestCase): # mm0=MEDFileMesh.New(fileName) mm1=MEDFileMesh.New(fileName) - groupNamesIni=MEDLoader.GetMeshGroupsNames(fileName,"ma") + groupNamesIni=GetMeshGroupsNames(fileName,"ma") for name in groupNamesIni: mm1.changeGroupName(name,name+'N') pass @@ -2421,8 +2579,7 @@ class MEDLoaderTest(unittest.TestCase): def testInt32InMEDFileFieldStar1(self): fname="Pyfile63.med" f1=MEDLoaderDataForTest.buildVecFieldOnCells_1(); - arr=f1.getArray().convertToIntArr() - f1.setArray(None) + f1=f1.convertToIntField() m1=f1.getMesh() mm1=MEDFileUMesh.New() mm1.setCoords(m1.getCoords()) @@ -2430,19 +2587,17 @@ class MEDLoaderTest(unittest.TestCase): mm1.setName(m1.getName()) mm1.write(fname,2) ff1=MEDFileIntField1TS() - ff1.setFieldNoProfileSBT(f1,arr) - a,b=ff1.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertEqual(b.getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) - self.assertTrue(b.isEqual(arr)) + ff1.setFieldNoProfileSBT(f1) + a=ff1.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) + self.assertEqual(a.getArray().getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) self.assertTrue(a.isEqual(f1,1e-12,1e-12)) ff1.write(fname,0) ff2=MEDFileAnyTypeField1TS.New(fname) self.assertEqual(ff2.getName(),"VectorFieldOnCells") self.assertEqual(ff2.getTime(),[0,1,2.0]) self.assertTrue(isinstance(ff2,MEDFileIntField1TS)) - a,b=ff1.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertEqual(b.getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) - self.assertTrue(b.isEqual(arr)) + a=ff1.getFieldOnMeshAtLevel(ON_CELLS,0,mm1) + self.assertEqual(a.getArray().getInfoOnComponents(),['power [MW/m^3]','density [g/cm^3]','temperature [K]']) self.assertTrue(a.isEqual(f1,1e-12,1e-12)) ff2.setTime(1,2,3.) c=ff2.getUndergroundDataArray() ; c*=2 @@ -2451,42 +2606,40 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(ffs1.getTimeSteps(),[(0, 1, 2.0), (1, 2, 3.0)]) self.assertEqual(len(ffs1),2) self.assertTrue(isinstance(ffs1,MEDFileIntFieldMultiTS)) - a,b=ffs1[2.].getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertTrue(b.isEqual(arr)) + a=ffs1[2.].getFieldOnMeshAtLevel(ON_CELLS,0,mm1) self.assertTrue(a.isEqual(f1,1e-12,1e-12)) - a,b=ffs1[2.].getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertTrue(b.isEqual(arr)) + a=ffs1.getFieldOnMeshAtLevel(ON_CELLS,0,1,0,mm1) self.assertTrue(a.isEqual(f1,1e-12,1e-12)) it=ffs1.__iter__() ; it.next() ; ff2bis=it.next() - a,b=ff2bis.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - self.assertTrue(b.isEqual(2*arr)) - f1.setTime(3.,1,2) - self.assertTrue(a.isEqual(f1,1e-12,1e-12)) + a=ff2bis.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) + self.assertTrue(a.getArray().isEqual(2*f1.getArray())) + f1.setTime(3.,1,2) ; f1.getArray()[:]*=2 + self.assertTrue(a.isEqual(f1,1e-12,1e-12)) ; f1.getArray()[:]/=2 bc=DataArrayInt(6,3) ; bc[:]=0 ; bc.setInfoOnComponents(['power [MW/m^3]','density [g/cm^3]','temperature [K]']) for it in ffs1: - a,b=it.getFieldOnMeshAtLevel(0,ON_CELLS,mm1) - bc+=b + a=it.getFieldOnMeshAtLevel(ON_CELLS,0,mm1) + bc+=a.getArray() pass - self.assertTrue(bc.isEqual(3*arr)) - nf1=MEDCouplingFieldDouble(ON_NODES) + self.assertTrue(bc.isEqual(3*f1.getArray())) + nf1=MEDCouplingFieldInt(ON_NODES) nf1.setTime(9.,10,-1) nf1.setMesh(f1.getMesh()) narr=DataArrayInt(12,2) ; narr.setInfoOnComponents(["aa [u1]","bbbvv [ppp]"]) ; narr[:,0]=range(12) ; narr[:,1]=2*narr[:,0] - nf1.setName("VectorFieldOnNodes") + nf1.setName("VectorFieldOnNodes") ; nf1.setArray(narr) nff1=MEDFileIntField1TS.New() - nff1.setFieldNoProfileSBT(nf1,narr) + nff1.setFieldNoProfileSBT(nf1) self.assertEqual(nff1.getInfo(),('aa [u1]','bbbvv [ppp]')) self.assertEqual(nff1.getTime(),[10,-1,9.0]) nff1.write(fname,0) # - nf2=MEDCouplingFieldDouble(ON_NODES) + nf2=MEDCouplingFieldInt(ON_NODES) nf2.setTime(19.,20,-11) nf2.setMesh(f1.getMesh()) narr2=DataArrayInt(8,2) ; narr.setInfoOnComponents(["aapfl [u1]","bbbvvpfl [ppp]"]) ; narr2[:,0]=range(8) ; narr2[:,0]+=10 ; narr2[:,1]=3*narr2[:,0] - nf2.setName("VectorFieldOnNodesPfl") ; narr2.setName(nf2.getName()) + nf2.setName("VectorFieldOnNodesPfl") ; narr2.setName(nf2.getName()) ; nf2.setArray(narr2) nff2=MEDFileIntField1TS.New() npfl=DataArrayInt([1,2,4,5,6,7,10,11]) ; npfl.setName("npfl") - nff2.setFieldProfile(nf2,narr2,mm1,0,npfl) + nff2.setFieldProfile(nf2,mm1,0,npfl) nff2.getFieldWithProfile(ON_NODES,0,mm1) a,b=nff2.getFieldWithProfile(ON_NODES,0,mm1) ; b.setName(npfl.getName()) self.assertTrue(b.isEqual(npfl)) @@ -2513,8 +2666,8 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(isinstance(ffs[2],MEDFileFieldMultiTS)) self.assertTrue(isinstance(ffs[3],MEDFileIntFieldMultiTS)) # - self.assertTrue(fs["VectorFieldOnCells"][0].getUndergroundDataArray().isEqualWithoutConsideringStr(arr)) - self.assertTrue(fs["VectorFieldOnCells"][1,2].getUndergroundDataArray().isEqualWithoutConsideringStr(2*arr)) + self.assertTrue(fs["VectorFieldOnCells"][0].getUndergroundDataArray().isEqualWithoutConsideringStr(f1.getArray())) + self.assertTrue(fs["VectorFieldOnCells"][1,2].getUndergroundDataArray().isEqualWithoutConsideringStr(2*f1.getArray())) self.assertTrue(fs["VectorFieldOnNodesPfl"][0].getUndergroundDataArray().isEqualWithoutConsideringStr(narr2)) self.assertTrue(fs["VectorFieldOnNodes"][9.].getUndergroundDataArray().isEqualWithoutConsideringStr(narr)) self.assertTrue(fs["VectorFieldOnNodesDouble"][29.].getUndergroundDataArray().isEqualWithoutConsideringStr(f1.getMesh().getCoords(),1e-12)) @@ -2575,13 +2728,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2610,9 +2763,9 @@ class MEDLoaderTest(unittest.TestCase): pass # add a mismatch of nb of compos pass - fmts0_2=fmts0_0.deepCpy() - fmts0_3=fmts0_0.deepCpy() - fmts0_4=fmts0_0.deepCpy() + fmts0_2=fmts0_0.deepCopy() + fmts0_3=fmts0_0.deepCopy() + fmts0_4=fmts0_0.deepCopy() fmts0_5=fmts0_0.shallowCpy() self.assertTrue(len(fmts0_0)==10 and len(fmts0_1)==10 and len(fmts0_2)==10 and len(fmts0_3)==10 and len(fmts0_4)==10 and len(fmts0_5)==10) del fmts0_2[::2] @@ -2653,13 +2806,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2688,9 +2841,9 @@ class MEDLoaderTest(unittest.TestCase): fmts0_0.zipPflsNames() self.assertEqual(fmts0_0.getPfls(),('pfl_NORM_QUAD4',)) self.assertTrue(fmts0_1.getProfile("pfl_NORM_QUAD4").isEqual(fmts0_0.getProfile("pfl_NORM_QUAD4"))) - fmts0_2=fmts0_0.deepCpy() - fmts0_3=fmts0_0.deepCpy() - fmts0_4=fmts0_0.deepCpy() + fmts0_2=fmts0_0.deepCopy() + fmts0_3=fmts0_0.deepCopy() + fmts0_4=fmts0_0.deepCopy() fs0=MEDFileFields() fs0.pushField(fmts0_0) fmts0_2.setName("2ndField") ; fs0.pushField(fmts0_2) @@ -2718,13 +2871,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2787,13 +2940,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2802,7 +2955,7 @@ class MEDLoaderTest(unittest.TestCase): # ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m) ; arr=DataArrayDouble(m.getNumberOfCells()*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCell") - f0.checkCoherency() + f0.checkConsistencyLight() ff0.setFieldNoProfileSBT(f0) # fspExp=[(3,[(0,(0,4),'','')]),(4,[(0,(4,9),'','')])] @@ -2819,7 +2972,7 @@ class MEDLoaderTest(unittest.TestCase): del arr,f0,ff0,ff1,ff0i,fspExp ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["XX [pm]","YYY [hm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellPfl") - f0.checkCoherency() + f0.checkConsistencyLight() pfl=DataArrayInt.Range(0,7,1) ; pfl.setName("pfl") ff0.setFieldProfile(f0,mm,0,pfl) fspExp=[(3,[(0,(0,4),'','')]),(4,[(0,(4,7),'pfl_NORM_QUAD4','')])] @@ -2837,13 +2990,13 @@ class MEDLoaderTest(unittest.TestCase): ## MultiTimeSteps ff0=MEDFileFieldMultiTS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellMTime") ; f0.setTime(0.1,0,10) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldProfile(f0,mm,0,pfl) f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota(100) ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellMTime") ; f0.setTime(1.1,1,11) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldProfile(f0,mm,0,pfl) f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:7]) ; arr=DataArrayDouble(7*2) ; arr.iota(200) ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellMTime") ; f0.setTime(2.1,2,12) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldProfile(f0,mm,0,pfl) ff1=ff0.convertToInt() self.assertTrue(isinstance(ff1,MEDFileIntFieldMultiTS)) @@ -2889,13 +3042,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(30)] + tris=[tri.deepCopy() for i in xrange(30)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(40)] + quads=[quad.deepCopy() for i in xrange(40)] for i,elt in enumerate(quads): elt.translate([40+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -2904,7 +3057,7 @@ class MEDLoaderTest(unittest.TestCase): # ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m) ; arr=DataArrayDouble(m.getNumberOfCells()*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName("FieldCell") - f0.checkCoherency() + f0.checkConsistencyLight() ff0.setFieldNoProfileSBT(f0) ff0.write(fname,0) # @@ -2913,7 +3066,7 @@ class MEDLoaderTest(unittest.TestCase): # With profiles ff0=MEDFileField1TS() f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m[:50]) ; arr=DataArrayDouble(50*2) ; arr.iota() ; arr.rearrange(2) ; arr.setInfoOnComponents(["XX [pm]","YYY [hm]"]) ; f0.setArray(arr) ; f0.setName("FieldCellPfl") - f0.checkCoherency() + f0.checkConsistencyLight() pfl=DataArrayInt.Range(0,50,1) ; pfl.setName("pfl") ff0.setFieldProfile(f0,mm,0,pfl) fspExp=[(3,[(0,(0,30),'','')]),(4,[(0,(30,50),'pfl_NORM_QUAD4','')])] @@ -2925,7 +3078,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(not ff0.getUndergroundDataArray().isAllocated()) self.assertEqual(ff0.getUndergroundDataArray().getInfoOnComponents(),['X [km]','YY [mm]']) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(182,298+2*strMulFac)) + self.assertIn(heap_memory_ref,xrange(182,465+2*strMulFac)) ff0.loadArrays() ## arr=DataArrayDouble(140) ; arr.iota() ; arr.rearrange(2) self.assertTrue(ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) @@ -2934,7 +3087,7 @@ class MEDLoaderTest(unittest.TestCase): ff0=MEDFileField1TS(fname,"FieldCellPfl",False) self.assertEqual(ff0.getUndergroundDataArray().getInfoOnComponents(),["XX [pm]","YYY [hm]"]) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(350,415+6*strMulFac)) + self.assertIn(heap_memory_ref,xrange(350,520+6*strMulFac)) ff0.loadArrays() ## arr=DataArrayDouble(100) ; arr.iota() ; arr.rearrange(2) self.assertTrue(ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) @@ -2952,7 +3105,7 @@ class MEDLoaderTest(unittest.TestCase): self.assertEqual(ff0.getUndergroundDataArray().getIJ(30,1),5.5) self.assertTrue(not ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(1100,1215+2*strMulFac)) + self.assertIn(heap_memory_ref,xrange(1100,1384+2*strMulFac)) ff0.unloadArrays() hmd=ff0.getHeapMemorySize()-heap_memory_ref self.assertEqual(hmd,-800) # -50*8*2 @@ -2961,7 +3114,7 @@ class MEDLoaderTest(unittest.TestCase): # ff0=MEDFileField1TS(fname,"FieldCellPfl",-1,-1,False) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(299,415+6*strMulFac)) + self.assertIn(heap_memory_ref,xrange(299,520+6*strMulFac)) ff0.loadArrays() ## self.assertTrue(ff0.getUndergroundDataArray().isEqualWithoutConsideringStr(arr,1e-14)) self.assertEqual(ff0.getHeapMemorySize()-heap_memory_ref,50*8*2) @@ -2971,21 +3124,21 @@ class MEDLoaderTest(unittest.TestCase): for t in xrange(20): f0=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f0.setMesh(m) ; arr=DataArrayDouble(m.getNumberOfCells()*2) ; arr.iota(float(t+1000)) ; arr.rearrange(2) ; arr.setInfoOnComponents(["X [km]","YY [mm]"]) ; f0.setArray(arr) ; f0.setName(fieldName) f0.setTime(float(t)+0.1,t,100+t) - f0.checkCoherency() + f0.checkConsistencyLight() ff0.appendFieldNoProfileSBT(f0) pass ff0.write(fname,0) # ff0=MEDFileAnyTypeFieldMultiTS.New(fname,fieldName,False) heap_memory_ref=ff0.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(5536,5956+(80+26)*strMulFac)) + self.assertIn(heap_memory_ref,xrange(5536,8212+(80+26)*strMulFac)) ff0.loadArrays() self.assertEqual(ff0.getHeapMemorySize()-heap_memory_ref,20*70*8*2) del ff0 # ffs=MEDFileFields(fname,False) heap_memory_ref=ffs.getHeapMemorySize() - self.assertIn(heap_memory_ref,xrange(5335,6687+(80+50)*strMulFac)) + self.assertIn(heap_memory_ref,xrange(5335,9031+(80+50)*strMulFac)) ffs.loadArrays() self.assertEqual(ffs.getHeapMemorySize()-heap_memory_ref,20*70*8*2+70*8*2+50*8*2) pass @@ -3157,13 +3310,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -3272,13 +3425,13 @@ class MEDLoaderTest(unittest.TestCase): tri=MEDCouplingUMesh("tri",2) tri.allocateCells() ; tri.insertNextCell(NORM_TRI3,[0,1,2]) tri.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,0.)])) - tris=[tri.deepCpy() for i in xrange(4)] + tris=[tri.deepCopy() for i in xrange(4)] for i,elt in enumerate(tris): elt.translate([i,0]) tris=MEDCouplingUMesh.MergeUMeshes(tris) quad=MEDCouplingUMesh("quad",2) quad.allocateCells() ; quad.insertNextCell(NORM_QUAD4,[0,1,2,3]) quad.setCoords(DataArrayDouble([(0.,0.),(0.,1.),(1.,1.),(1.,0.)])) - quads=[quad.deepCpy() for i in xrange(5)] + quads=[quad.deepCopy() for i in xrange(5)] for i,elt in enumerate(quads): elt.translate([5+i,0]) quads=MEDCouplingUMesh.MergeUMeshes(quads) m=MEDCouplingUMesh.MergeUMeshes(tris,quads) @@ -3368,21 +3521,20 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(m.getFamilyFieldAtLevel(1).isEqual(DataArrayInt([-1,-1,-1,-1,-1,-2,-2,-2,-2,-2,-2,0,-1,-3,-3,-3]))) pass - #@unittest.skipUnless(False,"requires Vadim's green light") def testWRQPolyg1(self): fname="Pyfile72.med" m=MEDCoupling1SGTUMesh("mesh",NORM_QUAD4) ; m.allocateCells() m.insertNextCell([0,2,1,3]) m.setCoords(DataArrayDouble([0.,0.,1.,1.,1.,0.,0.,1.],4,2)) # - ms=[m.deepCpy() for i in xrange(4)] + ms=[m.deepCopy() for i in xrange(4)] for i,elt in enumerate(ms): elt.translate([float(i)*1.5,0.]) pass m0=MEDCoupling1SGTUMesh.Merge1SGTUMeshes(ms).buildUnstructured() m0.convertAllToPoly() # - ms=[m.deepCpy() for i in xrange(5)] + ms=[m.deepCopy() for i in xrange(5)] for i,elt in enumerate(ms): elt.translate([float(i)*1.5,1.5]) pass @@ -3413,7 +3565,7 @@ class MEDLoaderTest(unittest.TestCase): arr0=DataArrayDouble(9) ; arr0.iota() arr1=DataArrayDouble(9) ; arr1.iota(100) arr=DataArrayDouble.Meld(arr0,arr1) ; arr.setInfoOnComponents(["mm [kg]","sds [m]"]) - f.setArray(arr) ; f.checkCoherency() + f.setArray(arr) ; f.checkConsistencyLight() f.setTime(5.6,1,2) ff=MEDFileField1TS() ff.setFieldNoProfileSBT(f) @@ -3496,7 +3648,7 @@ class MEDLoaderTest(unittest.TestCase): for elt in [[0,1,2,3,4,5],[1,2,3,4,5,6],[2,3,4,5,6,7],[3,4,5,6,7,8]]:#4 m0.insertNextCell(NORM_PENTA6,elt) pass - m0.checkCoherency2() + m0.checkConsistency() m1=MEDCouplingUMesh(); m1.setName("mesh") m1.setMeshDimension(2); m1.allocateCells(5); @@ -3660,7 +3812,7 @@ class MEDLoaderTest(unittest.TestCase): m.changeSpaceDimension(3,0.) infos=["aa [b]","cc [de]","gg [klm]"] m.getCoords().setInfoOnComponents(infos) - m.checkCoherency2() + m.checkConsistency() mm=MEDFileUMesh() mm.setMeshAtLevel(0,m) m1=MEDCouplingCMesh() ; m1.setCoords(arr) ; m1.setName("Mesh") @@ -3744,22 +3896,22 @@ class MEDLoaderTest(unittest.TestCase): m.changeSpaceDimension(3,0.) infos=["aa [b]","cc [de]","gg [klm]"] m.getCoords().setInfoOnComponents(infos) - m.checkCoherency2() + m.checkConsistency() f=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f.setMesh(m) f.setName("Field") arr=DataArrayDouble(25,2) ; arr.setInfoOnComponents(compos) arr[:,0]=range(25) arr[:,1]=range(100,125) f.setArray(arr) - MEDLoader.WriteField(fileName,f,2) + WriteField(fileName,f,2) f=MEDCouplingFieldDouble(ON_NODES,ONE_TIME) ; f.setMesh(m) f.setName("FieldNode") arr=DataArrayDouble(36,2) ; arr.setInfoOnComponents(compos) arr[:,0]=range(200,236) arr[:,1]=range(300,336) f.setArray(arr) - f.checkCoherency() - MEDLoader.WriteFieldUsingAlreadyWrittenMesh(fileName,f) + f.checkConsistencyLight() + WriteFieldUsingAlreadyWrittenMesh(fileName,f) # ms=MEDFileMeshes() mm=MEDFileUMesh.LoadPartOf(fileName,meshName,[NORM_QUAD4],[0,6,1]) @@ -3771,7 +3923,7 @@ class MEDLoaderTest(unittest.TestCase): mm=MEDFileUMesh.LoadPartOf(fileName,meshName,[NORM_QUAD4],[3,15,1]) ms.pushMesh(mm) fs=MEDFileFields.LoadPartOf(fileName,False,ms) - fs=fs.deepCpy() + fs=fs.deepCopy() fs[0][0].loadArrays() arr=DataArrayDouble(12,2) ; arr[:,0]=range(3,15) ; arr[:,1]=range(103,115) arr.setInfoOnComponents(compos) @@ -3782,6 +3934,1848 @@ class MEDLoaderTest(unittest.TestCase): self.assertTrue(fs[1][0].getUndergroundDataArray().isEqual(arr,1e-12)) pass + def testMEDFileWithoutCells1(self): + fileName="Pyfile83.med" + coo=DataArrayDouble([(0,0,0),(1,0,0),(2,0,0)]) + coo.setInfoOnComponents(["aa [m]","bbb [s]","cccc [m/s]"]) + mm=MEDFileUMesh() + mm.setCoords(coo) + mm.setName("mesh") + mm.write(fileName,2) + # + mm=MEDFileMesh.New(fileName) + self.assertEqual(mm.getName(),"mesh") + self.assertTrue(mm.getCoords().isEqual(coo,1e-12)) + pass + + def testZipCoordsWithLoadPart1(self): + """ Test close to Pyfile82.med except that here zipCoords on MEDFileUMesh is invoked here to see if the PartDef is correctly updated. + """ + fileName="Pyfile84.med" + meshName="Mesh" + compos=["aa [kg]","bbb [m/s]"] + arr=DataArrayDouble(6) ; arr.iota() + m=MEDCouplingCMesh() ; m.setCoords(arr,arr) + m=m.buildUnstructured() + m.setName(meshName) + m.changeSpaceDimension(3,0.) + infos=["aa [b]","cc [de]","gg [klm]"] + m.getCoords().setInfoOnComponents(infos) + m.checkConsistency() + f=MEDCouplingFieldDouble(ON_CELLS,ONE_TIME) ; f.setMesh(m) + f.setName("Field") + arr=DataArrayDouble(25,2) ; arr.setInfoOnComponents(compos) + arr[:,0]=range(25) + arr[:,1]=range(100,125) + f.setArray(arr) + WriteField(fileName,f,2) + f=MEDCouplingFieldDouble(ON_NODES,ONE_TIME) ; f.setMesh(m) + f.setName("FieldNode") + arr=DataArrayDouble(36,2) ; arr.setInfoOnComponents(compos) + arr[:,0]=range(200,236) + arr[:,1]=range(300,336) + f.setArray(arr) + f.checkConsistencyLight() + WriteFieldUsingAlreadyWrittenMesh(fileName,f) + # + ms=MEDFileMeshes() + mm=MEDFileUMesh.LoadPartOf(fileName,meshName,[NORM_QUAD4],[4,6,1]) + ms.pushMesh(mm) + spd=mm.getPartDefAtLevel(0,NORM_QUAD4) + self.assertEqual(spd.getSlice(),slice(4,6,1)) + spd=mm.getPartDefAtLevel(1) + self.assertEqual(spd.getSlice(),slice(4,14,1)) + self.assertTrue(spd.getNumberOfElems()==10 and spd.getNumberOfElems()==mm.getNumberOfNodes()) + mm.zipCoords() # <- The important line is here ! + spd=mm.getPartDefAtLevel(0,NORM_QUAD4) + self.assertEqual(spd.getSlice(),slice(4,6,1)) + spd=mm.getPartDefAtLevel(1) + self.assertTrue(spd.getNumberOfElems()==8 and spd.getNumberOfElems()==mm.getNumberOfNodes()) + self.assertTrue(spd.toDAI().isEqual(DataArrayInt([4,5,6,7,10,11,12,13]))) + fs=MEDFileFields.LoadPartOf(fileName,False,ms) + fs[0][0].loadArrays() + arr=DataArrayDouble([(4,104),(5,105)]) + arr.setInfoOnComponents(compos) + self.assertTrue(fs[0][0].getUndergroundDataArray().isEqual(arr,1e-12)) + fs[1][0].loadArrays() + arr=DataArrayDouble([(204,304),(205,305),(206,306),(207,307),(210,310),(211,311),(212,312),(213,313)]) + arr.setInfoOnComponents(compos) + self.assertTrue(fs[1][0].getUndergroundDataArray().isEqual(arr,1e-12)) + pass + + def testMEDFileCMeshSetGroupsAtLevel(self): + """ Non regression test to check that setGroupsAtLevel is available with MEDFileCMesh. + """ + m=MEDCouplingCMesh() ; m.setCoords(DataArrayDouble([0,1,2,3,4]),DataArrayDouble([0,1,2,3,4])) + m.setName("Mesh") + mm=MEDFileCMesh() ; mm.setMesh(m) + grp=DataArrayInt([1,3,4,5,7]) ; grp.setName("MyAssembly") + mm.setGroupsAtLevel(0,[grp]) + self.assertTrue(mm.getFamilyFieldAtLevel(0).isEqual(DataArrayInt([-1,-2,-1,-2,-2,-2,-1,-2,-1,-1,-1,-1,-1,-1,-1,-1]))) + pass + + def testMEDFileUMeshBuildExtrudedMesh1(self): + """ New functionality of MEDFileUMesh.buildExtrudedMesh.""" + fileName="Pyfile85.med" + meshName2D="Mesh" + meshName1D="Mesh1D" + meshName3DOut="Mesh3D" + # + d1=DataArrayInt([0,4,20,24]) + d2=DataArrayInt([0,1,2,3,7,8,12,13,17,18,19,20]) + # + a=DataArrayDouble(6) ; a.iota() + m=MEDCouplingCMesh() ; m.setCoords(a,a) + m=m.buildUnstructured() + d1c=d1.buildComplement(m.getNumberOfCells()) + m=m[d1c] ; m.zipCoords() + m0=m[d2] ; m1=m[d2.buildComplement(m.getNumberOfCells())] + m0.simplexize(0) + m=MEDCouplingUMesh.MergeUMeshesOnSameCoords([m0,m1]) + m.setName(meshName2D) + mMinus1,a,b,c,d=m.buildDescendingConnectivity() + e=d.deltaShiftIndex().findIdsEqual(1) + # + mm=MEDFileUMesh() + mm.setMeshAtLevel(0,m) ; mm.setMeshAtLevel(-1,mMinus1) + grp0=DataArrayInt([0,1,2,3,4,5,24,25,26]) ; grp0.setName("grp0") + mm.setGroupsAtLevel(0,[grp0]) + grp1=e ; grp1.setName("grp1") + mm.setGroupsAtLevel(-1,[grp1]) + mm.write(fileName,2) + # + a=DataArrayDouble(3) ; a.iota() + tmp=MEDCouplingCMesh() ; tmp.setCoords(a) ; tmp=tmp.buildUnstructured() + tmp.setName(meshName1D) + tmp.changeSpaceDimension(3) + tmp.setCoords(tmp.getCoords()[:,[1,2,0]]) + mm1D=MEDFileUMesh() + mm1D.setMeshAtLevel(0,tmp) + mm1D.write(fileName,0) + # test is here ! + mm2D=MEDFileMesh.New(fileName,meshName2D) + mm1D=MEDFileMesh.New(fileName,meshName1D) + m1D=mm1D.getMeshAtLevel(0) + mm3D=mm2D.buildExtrudedMesh(m1D,0) + # + self.assertEqual(mm3D.getName(),mm2D.getName()) + self.assertEqual(mm3D.getNumberOfCellsAtLevel(0),66) + self.assertEqual(mm3D.getNumberOfCellsAtLevel(-1),194) + self.assertEqual(mm3D.getGroupsNames(),('grp0','grp0_extruded','grp0_top','grp1','grp1_extruded','grp1_top')) + self.assertEqual(mm3D.getGrpNonEmptyLevels("grp0"),(-1,)) + self.assertEqual(mm3D.getGrpNonEmptyLevels("grp0_top"),(-1,)) + self.assertEqual(mm3D.getGrpNonEmptyLevels("grp0_extruded"),(0,)) + self.assertEqual(mm3D.getGrpNonEmptyLevels("grp1"),(-2,)) + self.assertEqual(mm3D.getGrpNonEmptyLevels("grp1_top"),(-2,)) + self.assertEqual(mm3D.getGrpNonEmptyLevels("grp1_extruded"),(-1,)) + d=DataArrayDouble([(1.,0.,0.),(2.,0.,0.),(3.,0.,0.),(4.,0.,0.),(0.,1.,0.),(1.,1.,0.),(2.,1.,0.),(3.,1.,0.),(4.,1.,0.),(5.,1.,0.),(0.,2.,0.),(1.,2.,0.),(2.,2.,0.),(3.,2.,0.),(4.,2.,0.),(5.,2.,0.),(0.,3.,0.),(1.,3.,0.),(2.,3.,0.),(3.,3.,0.),(4.,3.,0.),(5.,3.,0.),(0.,4.,0.),(1.,4.,0.),(2.,4.,0.),(3.,4.,0.),(4.,4.,0.),(5.,4.,0.),(1.,5.,0.),(2.,5.,0.),(3.,5.,0.),(4.,5.,0.),(1.,0.,1.),(2.,0.,1.),(3.,0.,1.),(4.,0.,1.),(0.,1.,1.),(1.,1.,1.),(2.,1.,1.),(3.,1.,1.),(4.,1.,1.),(5.,1.,1.),(0.,2.,1.),(1.,2.,1.),(2.,2.,1.),(3.,2.,1.),(4.,2.,1.),(5.,2.,1.),(0.,3.,1.),(1.,3.,1.),(2.,3.,1.),(3.,3.,1.),(4.,3.,1.),(5.,3.,1.),(0.,4.,1.),(1.,4.,1.),(2.,4.,1.),(3.,4.,1.),(4.,4.,1.),(5.,4.,1.),(1.,5.,1.),(2.,5.,1.),(3.,5.,1.),(4.,5.,1.),(1.,0.,2.),(2.,0.,2.),(3.,0.,2.),(4.,0.,2.),(0.,1.,2.),(1.,1.,2.),(2.,1.,2.),(3.,1.,2.),(4.,1.,2.),(5.,1.,2.),(0.,2.,2.),(1.,2.,2.),(2.,2.,2.),(3.,2.,2.),(4.,2.,2.),(5.,2.,2.),(0.,3.,2.),(1.,3.,2.),(2.,3.,2.),(3.,3.,2.),(4.,3.,2.),(5.,3.,2.),(0.,4.,2.),(1.,4.,2.),(2.,4.,2.),(3.,4.,2.),(4.,4.,2.),(5.,4.,2.),(1.,5.,2.),(2.,5.,2.),(3.,5.,2.),(4.,5.,2.)]) + self.assertTrue(mm3D.getCoords().isEqual(d,1e-12)) + d=DataArrayInt([16,1,0,5,33,32,37,16,1,5,6,33,37,38,16,2,1,6,34,33,38,16,2,6,7,34,38,39,16,3,2,7,35,34,39,16,3,7,8,35,39,40,16,5,4,10,37,36,42,16,5,10,11,37,42,43,16,9,8,14,41,40,46,16,9,14,15,41,46,47,16,11,10,16,43,42,48,16,11,16,17,43,48,49,16,15,14,20,47,46,52,16,15,20,21,47,52,53,16,17,16,22,49,48,54,16,17,22,23,49,54,55,16,21,20,26,53,52,58,16,21,26,27,53,58,59,16,24,23,28,56,55,60,16,24,28,29,56,60,61,16,25,24,29,57,56,61,16,25,29,30,57,61,62,16,26,25,30,58,57,62,16,26,30,31,58,62,63,16,33,32,37,65,64,69,16,33,37,38,65,69,70,16,34,33,38,66,65,70,16,34,38,39,66,70,71,16,35,34,39,67,66,71,16,35,39,40,67,71,72,16,37,36,42,69,68,74,16,37,42,43,69,74,75,16,41,40,46,73,72,78,16,41,46,47,73,78,79,16,43,42,48,75,74,80,16,43,48,49,75,80,81,16,47,46,52,79,78,84,16,47,52,53,79,84,85,16,49,48,54,81,80,86,16,49,54,55,81,86,87,16,53,52,58,85,84,90,16,53,58,59,85,90,91,16,56,55,60,88,87,92,16,56,60,61,88,92,93,16,57,56,61,89,88,93,16,57,61,62,89,93,94,16,58,57,62,90,89,94,16,58,62,63,90,94,95,18,6,5,11,12,38,37,43,44,18,7,6,12,13,39,38,44,45,18,8,7,13,14,40,39,45,46,18,12,11,17,18,44,43,49,50,18,13,12,18,19,45,44,50,51,18,14,13,19,20,46,45,51,52,18,18,17,23,24,50,49,55,56,18,19,18,24,25,51,50,56,57,18,20,19,25,26,52,51,57,58,18,38,37,43,44,70,69,75,76,18,39,38,44,45,71,70,76,77,18,40,39,45,46,72,71,77,78,18,44,43,49,50,76,75,81,82,18,45,44,50,51,77,76,82,83,18,46,45,51,52,78,77,83,84,18,50,49,55,56,82,81,87,88,18,51,50,56,57,83,82,88,89,18,52,51,57,58,84,83,89,90]) + self.assertTrue(mm3D[0].getNodalConnectivity().isEqual(d)) + d=DataArrayInt([0,7,14,21,28,35,42,49,56,63,70,77,84,91,98,105,112,119,126,133,140,147,154,161,168,175,182,189,196,203,210,217,224,231,238,245,252,259,266,273,280,287,294,301,308,315,322,329,336,345,354,363,372,381,390,399,408,417,426,435,444,453,462,471,480,489,498]) + self.assertTrue(mm3D[0].getNodalConnectivityIndex().isEqual(d)) + d=DataArrayInt([3,1,0,5,3,1,5,6,3,2,1,6,3,2,6,7,3,3,2,7,3,3,7,8,3,5,4,10,3,5,10,11,3,9,8,14,3,9,14,15,3,11,10,16,3,11,16,17,3,15,14,20,3,15,20,21,3,17,16,22,3,17,22,23,3,21,20,26,3,21,26,27,3,24,23,28,3,24,28,29,3,25,24,29,3,25,29,30,3,26,25,30,3,26,30,31,3,65,64,69,3,65,69,70,3,66,65,70,3,66,70,71,3,67,66,71,3,67,71,72,3,69,68,74,3,69,74,75,3,73,72,78,3,73,78,79,3,75,74,80,3,75,80,81,3,79,78,84,3,79,84,85,3,81,80,86,3,81,86,87,3,85,84,90,3,85,90,91,3,88,87,92,3,88,92,93,3,89,88,93,3,89,93,94,3,90,89,94,3,90,94,95,4,1,0,32,33,4,0,5,37,32,4,5,1,33,37,4,5,6,38,37,4,6,1,33,38,4,2,1,33,34,4,6,2,34,38,4,6,7,39,38,4,7,2,34,39,4,3,2,34,35,4,7,3,35,39,4,7,8,40,39,4,8,3,35,40,4,5,4,36,37,4,4,10,42,36,4,10,5,37,42,4,10,11,43,42,4,11,5,37,43,4,9,8,40,41,4,8,14,46,40,4,14,9,41,46,4,14,15,47,46,4,15,9,41,47,4,10,16,48,42,4,16,11,43,48,4,16,17,49,48,4,17,11,43,49,4,14,20,52,46,4,20,15,47,52,4,20,21,53,52,4,21,15,47,53,4,16,22,54,48,4,22,17,49,54,4,22,23,55,54,4,23,17,49,55,4,20,26,58,52,4,26,21,53,58,4,26,27,59,58,4,27,21,53,59,4,24,23,55,56,4,23,28,60,55,4,28,24,56,60,4,28,29,61,60,4,29,24,56,61,4,25,24,56,57,4,29,25,57,61,4,29,30,62,61,4,30,25,57,62,4,26,25,57,58,4,30,26,58,62,4,30,31,63,62,4,31,26,58,63,4,11,12,44,43,4,12,6,38,44,4,12,13,45,44,4,13,7,39,45,4,13,14,46,45,4,17,18,50,49,4,18,12,44,50,4,18,19,51,50,4,19,13,45,51,4,19,20,52,51,4,24,18,50,56,4,25,19,51,57,4,33,32,64,65,4,32,37,69,64,4,37,33,65,69,4,37,38,70,69,4,38,33,65,70,4,34,33,65,66,4,38,34,66,70,4,38,39,71,70,4,39,34,66,71,4,35,34,66,67,4,39,35,67,71,4,39,40,72,71,4,40,35,67,72,4,37,36,68,69,4,36,42,74,68,4,42,37,69,74,4,42,43,75,74,4,43,37,69,75,4,41,40,72,73,4,40,46,78,72,4,46,41,73,78,4,46,47,79,78,4,47,41,73,79,4,42,48,80,74,4,48,43,75,80,4,48,49,81,80,4,49,43,75,81,4,46,52,84,78,4,52,47,79,84,4,52,53,85,84,4,53,47,79,85,4,48,54,86,80,4,54,49,81,86,4,54,55,87,86,4,55,49,81,87,4,52,58,90,84,4,58,53,85,90,4,58,59,91,90,4,59,53,85,91,4,56,55,87,88,4,55,60,92,87,4,60,56,88,92,4,60,61,93,92,4,61,56,88,93,4,57,56,88,89,4,61,57,89,93,4,61,62,94,93,4,62,57,89,94,4,58,57,89,90,4,62,58,90,94,4,62,63,95,94,4,63,58,90,95,4,43,44,76,75,4,44,38,70,76,4,44,45,77,76,4,45,39,71,77,4,45,46,78,77,4,49,50,82,81,4,50,44,76,82,4,50,51,83,82,4,51,45,77,83,4,51,52,84,83,4,56,50,82,88,4,57,51,83,89,4,6,5,11,12,4,7,6,12,13,4,8,7,13,14,4,12,11,17,18,4,13,12,18,19,4,14,13,19,20,4,18,17,23,24,4,19,18,24,25,4,20,19,25,26,4,70,69,75,76,4,71,70,76,77,4,72,71,77,78,4,76,75,81,82,4,77,76,82,83,4,78,77,83,84,4,82,81,87,88,4,83,82,88,89,4,84,83,89,90]) + self.assertTrue(mm3D[-1].getNodalConnectivity().isEqual(d)) + d=DataArrayInt([0,4,8,12,16,20,24,28,32,36,40,44,48,52,56,60,64,68,72,76,80,84,88,92,96,100,104,108,112,116,120,124,128,132,136,140,144,148,152,156,160,164,168,172,176,180,184,188,192,197,202,207,212,217,222,227,232,237,242,247,252,257,262,267,272,277,282,287,292,297,302,307,312,317,322,327,332,337,342,347,352,357,362,367,372,377,382,387,392,397,402,407,412,417,422,427,432,437,442,447,452,457,462,467,472,477,482,487,492,497,502,507,512,517,522,527,532,537,542,547,552,557,562,567,572,577,582,587,592,597,602,607,612,617,622,627,632,637,642,647,652,657,662,667,672,677,682,687,692,697,702,707,712,717,722,727,732,737,742,747,752,757,762,767,772,777,782,787,792,797,802,807,812,817,822,827,832,837,842,847,852,857,862,867,872,877,882,887,892,897,902,907,912,917,922]) + self.assertTrue(mm3D[-1].getNodalConnectivityIndex().isEqual(d)) + d=DataArrayInt([1,1,0,1,0,5,1,5,1,1,5,6,1,6,1,1,2,1,1,6,2,1,6,7,1,7,2,1,3,2,1,7,3,1,7,8,1,8,3,1,5,4,1,4,10,1,10,5,1,10,11,1,11,5,1,9,8,1,8,14,1,14,9,1,14,15,1,15,9,1,10,16,1,16,11,1,16,17,1,17,11,1,14,20,1,20,15,1,20,21,1,21,15,1,16,22,1,22,17,1,22,23,1,23,17,1,20,26,1,26,21,1,26,27,1,27,21,1,24,23,1,23,28,1,28,24,1,28,29,1,29,24,1,25,24,1,29,25,1,29,30,1,30,25,1,26,25,1,30,26,1,30,31,1,31,26,1,11,12,1,12,6,1,12,13,1,13,7,1,13,14,1,17,18,1,18,12,1,18,19,1,19,13,1,19,20,1,24,18,1,25,19,1,65,64,1,64,69,1,69,65,1,69,70,1,70,65,1,66,65,1,70,66,1,70,71,1,71,66,1,67,66,1,71,67,1,71,72,1,72,67,1,69,68,1,68,74,1,74,69,1,74,75,1,75,69,1,73,72,1,72,78,1,78,73,1,78,79,1,79,73,1,74,80,1,80,75,1,80,81,1,81,75,1,78,84,1,84,79,1,84,85,1,85,79,1,80,86,1,86,81,1,86,87,1,87,81,1,84,90,1,90,85,1,90,91,1,91,85,1,88,87,1,87,92,1,92,88,1,92,93,1,93,88,1,89,88,1,93,89,1,93,94,1,94,89,1,90,89,1,94,90,1,94,95,1,95,90,1,75,76,1,76,70,1,76,77,1,77,71,1,77,78,1,81,82,1,82,76,1,82,83,1,83,77,1,83,84,1,88,82,1,89,83]) + self.assertTrue(mm3D[-2].getNodalConnectivity().isEqual(d)) + d=DataArrayInt(129) ; d.iota() ; d*=3 + self.assertTrue(mm3D[-2].getNodalConnectivityIndex().isEqual(d)) + # + self.assertEqual(mm3D.getGroupArr(-1,"grp0").getName(),"grp0") + self.assertEqual(mm3D.getGroupArr(-2,"grp1").getName(),"grp1") + self.assertTrue(mm3D.getGroupArr(-1,"grp0").isEqualWithoutConsideringStr(DataArrayInt([0,1,2,3,4,5,176,177,178]))) + self.assertTrue(mm3D.getGroupArr(-1,"grp0_top").isEqualWithoutConsideringStr(DataArrayInt([24,25,26,27,28,29,185,186,187]))) + self.assertTrue(mm3D.getGroupArr(-2,"grp1").isEqualWithoutConsideringStr(DataArrayInt([0,1,5,9,12,13,14,18,22,23,30,31,33,37,38,40,42,46,50,51]))) + self.assertTrue(mm3D.getGroupArr(-2,"grp1_top").isEqualWithoutConsideringStr(DataArrayInt([64,65,69,73,76,77,78,82,86,87,94,95,97,101,102,104,106,110,114,115]))) + self.assertTrue(mm3D.getGroupArr(0,"grp0_extruded").isEqualWithoutConsideringStr(DataArrayInt([0,1,2,3,4,5,24,25,26,27,28,29,48,49,50,57,58,59]))) + self.assertTrue(mm3D.getGroupArr(-1,"grp1_extruded").isEqualWithoutConsideringStr(DataArrayInt([48,49,53,57,60,61,62,66,70,71,78,79,81,85,86,88,90,94,98,99,112,113,117,121,124,125,126,130,134,135,142,143,145,149,150,152,154,158,162,163]))) + mm3D.setName("MeshExtruded") + mm3D.write(fileName,0) + pass + + @unittest.skipUnless(MEDCouplingHasNumPyBindings(),"requires numpy") + def testMEDFileUMeshPickeling1(self): + import cPickle + outFileName="Pyfile86.med" + c=DataArrayDouble([-0.3,-0.3, 0.2,-0.3, 0.7,-0.3, -0.3,0.2, 0.2,0.2, 0.7,0.2, -0.3,0.7, 0.2,0.7, 0.7,0.7 ],9,2) + c.setInfoOnComponents(["aa","bbb"]) + targetConn=[0,3,4,1, 1,4,2, 4,5,2, 6,7,4,3, 7,8,5,4] + m=MEDCouplingUMesh(); + m.setMeshDimension(2); + m.allocateCells(5); + m.insertNextCell(NORM_TRI3,3,targetConn[4:7]) + m.insertNextCell(NORM_TRI3,3,targetConn[7:10]) + m.insertNextCell(NORM_QUAD4,4,targetConn[0:4]) + m.insertNextCell(NORM_POLYGON,4,targetConn[10:14]) + m.insertNextCell(NORM_POLYGON,4,targetConn[14:18]) + m.finishInsertingCells(); + m.setCoords(c) + m.checkConsistencyLight() + m1=MEDCouplingUMesh.New(); + m1.setMeshDimension(1); + m1.allocateCells(3); + m1.insertNextCell(NORM_SEG2,2,[1,4]) + m1.insertNextCell(NORM_SEG2,2,[3,6]) + m1.insertNextCell(NORM_SEG3,3,[2,8,5]) + m1.finishInsertingCells(); + m1.setCoords(c) + m1.checkConsistencyLight() + m2=MEDCouplingUMesh.New(); + m2.setMeshDimension(0); + m2.allocateCells(4); + m2.insertNextCell(NORM_POINT1,1,[1]) + m2.insertNextCell(NORM_POINT1,1,[3]) + m2.insertNextCell(NORM_POINT1,1,[2]) + m2.insertNextCell(NORM_POINT1,1,[6]) + m2.finishInsertingCells(); + m2.setCoords(c) + m2.checkConsistencyLight() + # + mm=MEDFileUMesh.New() + self.assertTrue(mm.getUnivNameWrStatus()) + mm.setName("MyFirstMEDCouplingMEDmesh") + mm.setDescription("IHopeToConvinceLastMEDMEMUsers") + mm.setCoords(c) + mm[-1]=m1; + mm[0]=m; + mm.setRenumFieldArr(0,DataArrayInt([32,41,50,56,7])) + mm[-2]=m2; + mm.setRenumFieldArr(-2,DataArrayInt([102,52,45,63])) + # playing with groups + g1_2=DataArrayInt.New() + g1_2.setValues([1,3],2,1) + g1_2.setName("G1") + g2_2=DataArrayInt.New() + g2_2.setValues([1,2,3],3,1) + g2_2.setName("G2") + mm.setGroupsAtLevel(0,[g1_2,g2_2],False) + g1_1=DataArrayInt.New() + g1_1.setValues([0,1,2],3,1) + g1_1.setName("G1") + g2_1=DataArrayInt.New() + g2_1.setValues([0,2],2,1) + g2_1.setName("G2") + mm.setGroupsAtLevel(-1,[g1_1,g2_1],False) + g1_N=DataArrayInt.New() + g1_N.setValues(range(8),8,1) + g1_N.setName("G1") + g2_N=DataArrayInt.New() + g2_N.setValues(range(9),9,1) + g2_N.setName("G2") + mm.setGroupsAtLevel(1,[g1_N,g2_N],False) + mm.createGroupOnAll(0,"GrpOnAllCell") + # check content of mm + t=mm.getGroupArr(0,"G1",False) + self.assertTrue(g1_2.isEqual(t)); + t=mm.getGroupArr(0,"G2",False) + self.assertTrue(g2_2.isEqual(t)); + t=mm.getGroupArr(-1,"G1",False) + self.assertTrue(g1_1.isEqual(t)); + t=mm.getGroupArr(-1,"G2",False) + self.assertTrue(g2_1.isEqual(t)); + t=mm.getGroupArr(1,"G1",False) + self.assertTrue(g1_N.isEqual(t)); + t=mm.getGroupArr(1,"G2",False) + self.assertTrue(g2_N.isEqual(t)); + self.assertTrue(mm.existsGroup("GrpOnAllCell")); + t=mm.getGroupArr(0,"GrpOnAllCell") + # + st=cPickle.dumps(mm,cPickle.HIGHEST_PROTOCOL) + mm2=cPickle.loads(st) + self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + self.assertEqual(mm.getAxisType(),AX_CART) + # + mm.setAxisType(AX_CYL) + st=cPickle.dumps(mm,cPickle.HIGHEST_PROTOCOL) + mm2=cPickle.loads(st) + self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + self.assertEqual(mm2.getAxisType(),AX_CYL) + pass + + def testMEDFileFieldsLoadSpecificEntities1(self): + nbNodes=11 + fieldName="myField" + fileName="Pyfile87.med" + nbPdt=10 + meshName="Mesh" + # + m=MEDCouplingCMesh() + arr=DataArrayDouble(nbNodes) ; arr.iota() + m.setCoords(arr) + m=m.buildUnstructured() + m.setName(meshName) + # + fmts=MEDFileFieldMultiTS() + for i in xrange(nbPdt): + f=MEDCouplingFieldDouble(ON_NODES) + f.setMesh(m) + arr=DataArrayDouble(nbNodes) ; arr.iota() ; arr*=i + f.setArray(arr) + f.setName(fieldName) + f.setTime(float(i),i,0) + fmts.appendFieldNoProfileSBT(f) + pass + # + mm=MEDFileUMesh() ; mm[0]=m + fmts.write(fileName,2) + mm.write(fileName,0) + # + fs=MEDFileFields(fileName,False) + fs2=MEDFileFields.LoadSpecificEntities(fileName,[(ON_NODES,NORM_ERROR)],False) + fs.loadArraysIfNecessary() + fs2.loadArraysIfNecessary() + for i in xrange(nbPdt): + self.assertTrue(fs[fieldName][i].getUndergroundDataArray().isEqual(fs2[fieldName][i].getUndergroundDataArray(),1e-12)) + pass + m1=MEDCouplingCMesh() ; m1.setCoords(DataArrayDouble([0,1,2,3]),DataArrayDouble([0,1])) ; m1=m1.buildUnstructured() ; m1.simplexize(0) + m2=MEDCouplingCMesh() ; m2.setCoords(DataArrayDouble([3,4,5]),DataArrayDouble([0,1])) ; m2=m2.buildUnstructured() + m3=MEDCouplingUMesh.MergeUMeshes(m1,m2) ; m3.setName(meshName) + fmts=MEDFileFieldMultiTS() + for i in xrange(nbPdt): + f=MEDCouplingFieldDouble(ON_CELLS) + f.setMesh(m3) + arr=DataArrayDouble(8) ; arr.iota() ; arr*=i + f.setArray(arr) + f.setName(fieldName) + f.setTime(float(i),i,0) + fmts.appendFieldNoProfileSBT(f) + pass + mm=MEDFileUMesh() ; mm[0]=m3 + del mm[0] + self.assertEqual(mm.getNonEmptyLevels(),()) + mm[0]=m3 + self.assertEqual(mm.getNonEmptyLevels(),(0,)) + fmts.write(fileName,2) + fs=MEDFileFields(fileName,False) + fs2=MEDFileFields.LoadSpecificEntities(fileName,[(ON_CELLS,NORM_TRI3)],False) + fs3=MEDFileFieldMultiTS.LoadSpecificEntities(fileName,fieldName,[(ON_CELLS,NORM_QUAD4)],False) + fs4=MEDFileFields.LoadSpecificEntities(fileName,[(ON_CELLS,NORM_TRI3),(ON_CELLS,NORM_QUAD4)],False) + fs.loadArraysIfNecessary() + fs2.loadArraysIfNecessary() + fs3.loadArraysIfNecessary() + fs4.loadArraysIfNecessary() + for i in xrange(nbPdt): + self.assertTrue(fs[fieldName][i].getUndergroundDataArray()[:6].isEqual(fs2[fieldName][i].getUndergroundDataArray(),1e-12)) + self.assertTrue(fs[fieldName][i].getUndergroundDataArray()[6:8].isEqual(fs3[i].getUndergroundDataArray(),1e-12)) + self.assertTrue(fs[fieldName][i].getUndergroundDataArray().isEqual(fs4[fieldName][i].getUndergroundDataArray(),1e-12)) + pass + pass + + def testMEDFileLotsOfTSRW1(self): + nbNodes=11 + fieldName="myField" + fileName="Pyfile88.med" + nbPdt=300 # <- perftest = 30000 + meshName="Mesh" + # + maxPdt=100 # <- optimum = 500 + m=MEDCouplingCMesh() + arr=DataArrayDouble(nbNodes) ; arr.iota() + m.setCoords(arr) + m=m.buildUnstructured() + m.setName(meshName) + # + nbOfField=nbPdt/maxPdt + fs=MEDFileFields() + for j in xrange(nbOfField): + fmts=MEDFileFieldMultiTS() + s=DataArray.GetSlice(slice(0,nbPdt,1),j,nbOfField) + for i in xrange(s.start,s.stop,s.step): + f=MEDCouplingFieldDouble(ON_NODES) + f.setMesh(m) + arr=DataArrayDouble(nbNodes) ; arr.iota() ; arr*=i + f.setArray(arr) + f.setName("%s_%d"%(fieldName,j)) + f.setTime(float(i),i,0) + fmts.appendFieldNoProfileSBT(f) + pass + fs.pushField(fmts) + pass + # + mm=MEDFileUMesh() ; mm[0]=m + fs.write(fileName,2) + mm.write(fileName,0) + ############ + def appendInDict(d,key,val): + if key in d: + d[key].append(val) + else: + d[key]=[val] + pass + import re + allFields=GetAllFieldNames(fileName) + allFieldsDict={} + pat=re.compile("([\d]+)([\s\S]+)$") + for st in allFields: + stRev=st[::-1] + m=pat.match(stRev) + if m: + appendInDict(allFieldsDict,m.group(2)[::-1],m.group(1)[::-1]) + pass + else: + appendInDict(allFieldsDict,st,'') + pass + pass + fs2=MEDFileFields() + for k in allFieldsDict: + if allFieldsDict[k]!=['']: + allFieldsDict[k]=sorted(allFieldsDict[k],key=lambda x: int(x)) + pass + fmts2=[] + for it in allFieldsDict[k]: + fmts2.append(MEDFileFieldMultiTS.LoadSpecificEntities(fileName,k+it,[(ON_NODES,NORM_ERROR)])) + pass + fmts2.reverse() + zeResu=fmts2.pop() + nbIter=len(fmts2) + for ii in xrange(nbIter): + zeResu.pushBackTimeSteps(fmts2.pop()) + pass + zeResu.setName(k) + fs2.pushField(zeResu) + pass + self.assertEqual(fs2[0].getTimeSteps(),[(i,0,float(i)) for i in xrange(nbPdt)]) + pass + + def testMEDFileMeshRearrangeFamIds1(self): + """ Test for bug EDF10720. The aim of this test is the call of MEDFileMesh.rearrangeFamilies.""" + fileName="Pyfile89.med" + meshName='Maillage_2' + mm=MEDFileUMesh() + coords=DataArrayDouble([(0.,0.,0.),(0.,0.,200.),(0.,200.,200.),(0.,200.,0.),(200.,0.,0.),(200.,0.,200.),(200.,200.,200.),(200.,200.,0.),(0.,0.,100.),(0.,100.,200.),(0.,200.,100.),(0.,100.,0.),(200.,0.,100.),(200.,100.,200.),(200.,200.,100.),(200.,100.,0.),(100.,0.,0.),(100.,0.,200.),(100.,200.,0.),(100.,200.,200.),(0.,116.87743909766768,83.12256090233232),(200.,116.87743909766768,83.12256090233232),(116.87743909766769,0.,116.87743909766769),(116.87743909766769,200.,116.87743909766769),(116.87743909766769,116.87743909766769,0.),(116.87743909766769,116.87743909766769,200.),(63.3851584383713,56.1391811199829,119.728314479261),(138.008709441123,116.039297556044,119.903790959468)]) + # + c0=DataArrayInt([14,1,26,9,8,14,17,26,1,8,14,27,26,17,22,14,26,16,20,8,14,8,0,16,11,14,16,20,11,24,14,25,20,26,27,14,22,26,24,27,14,26,16,22,24,14,8,26,22,17,14,20,9,25,26,14,19,20,25,23,14,23,6,27,25,14,19,23,10,20,14,27,22,21,24,14,27,21,14,18,14,26,9,25,17,14,13,27,25,17,14,27,18,24,21,14,22,21,15,12,14,27,20,24,18,14,23,25,27,20,14,13,27,6,25,14,23,27,6,14,14,15,16,22,12,14,27,17,13,22,14,22,27,21,13,14,24,16,22,15,14,24,18,7,21,14,12,4,15,16,14,22,12,5,13,14,8,26,16,22,14,13,27,21,14,14,20,18,10,3,14,14,27,18,23,14,14,27,6,13,14,21,22,13,12,14,25,26,17,27,14,19,9,25,20,14,26,24,20,16,14,22,24,15,21,14,9,26,1,17,14,23,27,18,20,14,20,11,18,3,14,14,18,21,7,14,19,2,9,10,14,19,23,25,6,14,18,23,20,10,14,20,26,8,9,14,22,13,5,17,14,24,11,18,20,14,21,15,7,24,14,19,20,10,9,14,20,26,27,24,14,16,8,11,20]) + c0i=DataArrayInt([0,5,10,15,20,25,30,35,40,45,50,55,60,65,70,75,80,85,90,95,100,105,110,115,120,125,130,135,140,145,150,155,160,165,170,175,180,185,190,195,200,205,210,215,220,225,230,235,240,245,250,255,260,265,270,275]) + m0=MEDCouplingUMesh(meshName,3) ; m0.setCoords(coords) + m0.setConnectivity(c0,c0i) + mm[0]=m0 + # + c1=DataArrayInt([3,8,20,11,3,8,9,20,3,9,2,10,3,20,9,10,3,0,8,11,3,9,8,1,3,20,10,3,3,11,20,3,3,15,21,12,3,5,12,13,3,21,13,12,3,15,12,4,3,14,6,13,3,14,13,21,3,7,14,21,3,7,21,15,3,5,22,12,3,4,12,16,3,17,1,8,3,16,8,0,3,5,17,22,3,12,22,16,3,22,17,8,3,16,22,8,3,10,2,19,3,7,18,14,3,14,23,6,3,3,10,18,3,23,19,6,3,18,23,14,3,10,19,23,3,10,23,18,3,3,18,11,3,7,24,18,3,15,4,16,3,11,16,0,3,7,15,24,3,18,24,11,3,24,15,16,3,11,24,16,3,9,19,2,3,19,25,6,3,17,5,13,3,1,17,9,3,25,13,6,3,9,25,19,3,17,13,25,3,17,25,9]) + c1i=DataArrayInt([0,4,8,12,16,20,24,28,32,36,40,44,48,52,56,60,64,68,72,76,80,84,88,92,96,100,104,108,112,116,120,124,128,132,136,140,144,148,152,156,160,164,168,172,176,180,184,188,192]) + m1=MEDCouplingUMesh(meshName,2) ; m1.setCoords(coords) + m1.setConnectivity(c1,c1i) + mm[-1]=m1 + # + c2=DataArrayInt([0,8,8,1,1,9,9,2,3,10,10,2,0,11,11,3,4,12,12,5,5,13,13,6,7,14,14,6,4,15,15,7,0,16,16,4,1,17,17,5,3,18,18,7,2,19,19,6]) + m2=MEDCoupling1SGTUMesh(meshName,NORM_SEG2) + m2.setNodalConnectivity(c2) ; m2.setCoords(coords) + mm[-2]=m2.buildUnstructured() + # + ref0=DataArrayInt(55) ; ref0[:]=0 + mm.setFamilyFieldArr(0,ref0) + mm.setFamilyFieldArr(1,DataArrayInt([0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0])) + ref1=DataArrayInt([0,0,0,0,0,0,0,0,-6,-6,-6,-6,-6,-6,-6,-6,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]) + mm.setFamilyFieldArr(-1,ref1) + ref2=DataArrayInt([0,0,-7,-7,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]) + mm.setFamilyFieldArr(-2,ref2) + # + for f,fid in (('FAMILLE_ZERO',0),('FAM_-6_Groupe_1',-6),('FAM_-7_Groupe_2',-7),('FAM_2_Groupe_3',2)): + mm.setFamilyId(f,fid) + for grp,fams in [('Groupe_1',('FAM_-6_Groupe_1',)),('Groupe_2',('FAM_-7_Groupe_2',)),('Groupe_3',('FAM_2_Groupe_3',))]: + mm.setFamiliesOnGroup(grp,fams) + mm.write(fileName,2) + # + mm=MEDFileMesh.New(fileName) + grp=mm.getGroup(-1,"Groupe_1") + dai=grp.computeFetchedNodeIds() + dai.setName("TOTO") + mm.addGroup(1,dai) + mm.rearrangeFamilies() # <- the aim of the test + self.assertTrue(dai.isEqual(mm.getGroupArr(1,"TOTO"))) + self.assertTrue(mm.getFamilyFieldAtLevel(0).isEqual(ref0)) + self.assertTrue(mm.getFamilyFieldAtLevel(-1).isEqual(ref1)) + self.assertTrue(mm.getFamilyFieldAtLevel(-2).isEqual(ref2)) + self.assertTrue(mm.getFamilyFieldAtLevel(1).isEqual(DataArrayInt([0,0,2,0,9,9,9,9,0,0,0,0,9,9,9,9,0,0,0,0,0,9,0,0,0,0,0,0]))) + allGrps=[('Groupe_1',('FAM_-6_Groupe_1',)),('Groupe_2',('FAM_-7_Groupe_2',)),('Groupe_3',('FAM_2_Groupe_3',)),('TOTO',('Family_9',))] + allFams=[('FAMILLE_ZERO',0),('FAM_-6_Groupe_1',-6),('FAM_-7_Groupe_2',-7),('FAM_2_Groupe_3',2),('Family_9',9)] + self.assertEqual(list(mm.getGroupsNames()),[elt[0] for elt in allGrps]) + for elt,fams in allGrps: + self.assertEqual(mm.getFamiliesOnGroup(elt),fams) + self.assertEqual(list(mm.getFamiliesNames()),[elt[0] for elt in allFams]) + for elt,eltId in allFams: + self.assertEqual(mm.getFamilyId(elt),eltId) + pass + + def testNonRegrCMeshSetFieldPfl1(self): + """ Non regression test. For structured mesh, push a false partial field in MEDFileField1TS using setFieldProfile.""" + ff=MEDFileField1TS() + meshName="mesh" + mm=MEDFileCMesh() + m=MEDCouplingCMesh() ; arr=DataArrayDouble(5) ; arr.iota() + m.setCoords(arr) + m.setName(meshName) + mm.setMesh(m) + field=MEDCouplingFieldDouble(ON_CELLS) + field.setMesh(m) + field.setArray(DataArrayDouble([1.2,2.3,3.4,4.5])) + field.setName("Field") + field.checkConsistencyLight() + pfl=DataArrayInt([0,1,2,3]) ; pfl.setName("TUTU") #<- false profile because defined on all cells ! + ff.setFieldProfile(field,mm,0,pfl) # <- bug was revealed here ! + self.assertEqual(ff.getPfls(),()) + field2=ff.getFieldOnMeshAtLevel(ON_CELLS,0,mm) + self.assertTrue(field.isEqual(field2,1e-12,1e-12)) + del ff,mm,field,field2,pfl + # same with unstructured mesh + ff=MEDFileField1TS() + meshName="mesh" + mm=MEDFileUMesh() + m=MEDCouplingCMesh() ; arr=DataArrayDouble(5) ; arr.iota() + m.setCoords(arr) + m.setName(meshName) + m=m.buildUnstructured() + mm[0]=m + field=MEDCouplingFieldDouble(ON_CELLS) + field.setMesh(m) + field.setArray(DataArrayDouble([1.2,2.3,3.4,4.5])) + field.setName("Field") + field.checkConsistencyLight() + pfl=DataArrayInt([0,1,2,3]) ; pfl.setName("TUTU") + ff.setFieldProfile(field,mm,0,pfl) + self.assertEqual(ff.getPfls(),()) + field2=ff.getFieldOnMeshAtLevel(ON_CELLS,0,mm) + self.assertTrue(field.isEqual(field2,1e-12,1e-12)) + pass + + def testMEDFileUMeshLinearToQuadraticAndRev1(self): + meshName="mesh" + fileName="Pyfile90.med" + fileName2="Pyfile91.med" + arr=DataArrayDouble(5) ; arr.iota() + m=MEDCouplingCMesh() ; m.setCoords(arr,arr) + m=m.buildUnstructured() + d=DataArrayInt([3,7,11,15]) + m1=m[d] + m1.simplexize(0) + m2=m[d.buildComplement(m.getNumberOfCells())] + m=MEDCouplingUMesh.MergeUMeshesOnSameCoords(m1,m2) + m.changeSpaceDimension(3,0.) + arr=DataArrayDouble(3) ; arr.iota() + m1D=MEDCouplingCMesh() ; m1D.setCoords(arr) ; m1D=m1D.buildUnstructured() ; m1D.changeSpaceDimension(3,0.) + m1D.setCoords(m1D.getCoords()[:,[1,2,0]]) + delta=m.getNumberOfNodes()*(m1D.getNumberOfNodes()-1) + m3D=m.buildExtrudedMesh(m1D,0) + m3D.sortCellsInMEDFileFrmt() + m3D.setName(meshName) + m2D=m ; m2D.setCoords(m3D.getCoords()) ; m2D.shiftNodeNumbersInConn(delta) ; m2D.setName(meshName) ; m2D.checkConsistency() + m1D=m2D.computeSkin() ; m1D.setName(meshName) + m0D=MEDCouplingUMesh.Build0DMeshFromCoords(m3D.getCoords()) ; m0D.setName(meshName) ; m0D=m0D[[2,4,10]] + # + mm=MEDFileUMesh() + mm[0]=m3D ; mm[-1]=m2D ; mm[-2]=m1D ; mm[-3]=m0D + grpEdge0=DataArrayInt([1,2,3,5]) ; grpEdge0.setName("East") + grpEdge1=DataArrayInt([0,1]) ; grpEdge1.setName("Corner1") + grpFaceSouth=DataArrayInt([0,1,8,9,10]) ; grpFaceSouth.setName("SouthFace") + grpFaceNorth=DataArrayInt([6,7,17,18,19]) ; grpFaceNorth.setName("NorthFace") + diagFace=DataArrayInt([0,1,13,15,17]) ; diagFace.setName("DiagFace") + vol1=DataArrayInt([20,21,23,24]) ; vol1.setName("vol1") + vol2=DataArrayInt([2,3,4,5,21,24]) ; vol2.setName("vol2") + mm.setGroupsAtLevel(0,[vol1,vol2]) + mm.setGroupsAtLevel(-1,[grpFaceSouth,grpFaceNorth,diagFace]) + mm.setGroupsAtLevel(-2,[grpEdge0,grpEdge1]) + # + mmOut1=mm.linearToQuadratic(0,0.) + mmOut1.write(fileName2,2) + mmOut2=mmOut1.quadraticToLinear(0.) + self.assertTrue(mm.isEqual(mmOut2,1e-12)[0]) + pass + + def testMEDFileMeshAddGroup1(self): + m=MEDCouplingCMesh() + arrX=DataArrayDouble(9) ; arrX.iota() + arrY=DataArrayDouble(4) ; arrY.iota() + m.setCoords(arrX,arrY) + m.setName("mesh") + mm=MEDFileCMesh() + mm.setMesh(m) + grp0=DataArrayInt([3,5,6,21,22]) ; grp0.setName("grp0") + mm.addGroup(0,grp0) + grp1=DataArrayInt([3,4,5,8,18,19,22]) ; grp1.setName("grp1") + mm.addGroup(0,grp1) + grp2=DataArrayInt([0,1,2,10,11]) ; grp2.setName("grp2") + mm.addGroup(0,grp2) + grp3=DataArrayInt([23]) ; grp3.setName("grp3") + mm.addGroup(0,grp3) + for grp in [grp0,grp1,grp2,grp3]: + self.assertTrue(mm.getGroupArr(0,grp.getName()).isEqual(grp)) + self.assertEqual(mm.getGroupsNames(),('grp0','grp1','grp2','grp3')) + delta=12 + for grp in [grp0,grp1,grp2,grp3]: + grpNode=grp.deepCopy() ; grpNode+=delta ; grpNode.setName("%s_node"%grp.getName()) + mm.addGroup(1,grpNode) + self.assertEqual(mm.getGroupsNames(),('grp0','grp0_node','grp1','grp1_node','grp2','grp2_node','grp3','grp3_node')) + for grp in [grp0,grp1,grp2,grp3]: + self.assertTrue(mm.getGroupArr(0,grp.getName()).isEqual(grp)) + for grp in [grp0,grp1,grp2,grp3]: + grpExp=grp+delta ; grpExp.setName("%s_node"%grp.getName()) + self.assertTrue(mm.getGroupArr(1,"%s_node"%grp.getName()).isEqual(grpExp)) + mm.normalizeFamIdsMEDFile() + for grp in [grp0,grp1,grp2,grp3]: + self.assertTrue(mm.getGroupArr(0,grp.getName()).isEqual(grp)) + for grp in [grp0,grp1,grp2,grp3]: + grpExp=grp+delta ; grpExp.setName("%s_node"%grp.getName()) + self.assertTrue(mm.getGroupArr(1,"%s_node"%grp.getName()).isEqual(grpExp)) + pass + + pass + def testMEDFileJoint1(self): + fileName="Pyfile92.med" + coo=DataArrayDouble([(0,0,0),(1,0,0),(2,0,0)]) + coo.setInfoOnComponents(["x [cm]","y [cm]","z [cm]"]) + mm=MEDFileUMesh() + mm.setCoords(coo) + mm.setName("maa1") + mm.setDescription("un maillage") + mm.write(fileName,2) + node_correspond=MEDFileJointCorrespondence(DataArrayInt([1,2,3,4,5,6,7,8])) + cell_correspond=MEDFileJointCorrespondence(DataArrayInt([9,10,11,12]),NORM_TRI3,NORM_TRI3) + one_step_joint=MEDFileJointOneStep() + one_step_joint.pushCorrespondence(cell_correspond) + one_step_joint.pushCorrespondence(node_correspond) + one_joint=MEDFileJoint() + one_joint.pushStep(one_step_joint) + one_joint.setLocalMeshName("maa1") + one_joint.setRemoteMeshName("maa1") + one_joint.setDescription("joint_description") + one_joint.setJointName("joint_1") + one_joint.setDomainNumber(1) + self.assertEqual( one_joint.getLocalMeshName(), "maa1") + self.assertEqual( one_joint.getRemoteMeshName(), "maa1") + self.assertEqual( one_joint.getDescription(), "joint_description") + self.assertEqual( one_joint.getJointName(), "joint_1") + self.assertEqual( one_joint.getDomainNumber(), 1) + joints=MEDFileJoints() + joints.pushJoint(one_joint); + joints.write(fileName,0) + # read back + jointsR=MEDFileJoints(fileName,mm.getName()) + self.assertEqual( jointsR.getNumberOfJoints(), 1 ) + jR = jointsR.getJointAtPos(0) + self.assertTrue( jR.isEqual( one_joint )) + self.assertRaises( InterpKernelException, jointsR.getJointAtPos,1) + self.assertRaises( InterpKernelException, jointsR.destroyJointAtPos,1) + jointsR.destroyJointAtPos(0) + + pass + def testMEDFileJoint2(self): + fileNameWr="Pyfile93.med" + coo=DataArrayDouble([(0,0,0),(1,0,0),(2,0,0)]) + coo.setInfoOnComponents(["x [cm]","y [cm]","z [cm]"]) + mm=MEDFileUMesh() + mm.setCoords(coo) + mm.setName("maa1") + mm.setDescription("un maillage") + node_correspond=MEDFileJointCorrespondence(DataArrayInt([13,14,15,16])) + cell_correspond=MEDFileJointCorrespondence(DataArrayInt([17,18]),NORM_TETRA4,NORM_PENTA6) + one_step_joint=MEDFileJointOneStep() + two_step_joint=MEDFileJointOneStep() + one_joint=MEDFileJoint() + two_joint=MEDFileJoint() + one_step_joint.pushCorrespondence(node_correspond) + one_joint.pushStep(one_step_joint) + two_step_joint.pushCorrespondence(cell_correspond) + two_step_joint.pushCorrespondence(node_correspond) + two_joint.pushStep(two_step_joint) + one_joint.setLocalMeshName("maa1") + one_joint.setRemoteMeshName("maa1") + one_joint.setDescription("joint_description_1") + one_joint.setJointName("joint_1") + one_joint.setDomainNumber(1) + two_joint.setLocalMeshName("maa1") + two_joint.setRemoteMeshName("maa1") + two_joint.setDescription("joint_description_2") + two_joint.setJointName("joint_2") + two_joint.setDomainNumber(2) + joints=MEDFileJoints() + joints.pushJoint(one_joint) + joints.pushJoint(two_joint) + mm.setJoints( joints ) + mm.write(fileNameWr,2) + # + mm=MEDFileMesh.New(fileNameWr) + self.assertEqual( mm.getNumberOfJoints(), 2) + jointsR = mm.getJoints(); + self.assertEqual( jointsR.getMeshName(), mm.getName() ) + self.assertEqual( len( jointsR ), 2 ) + jointR1 = jointsR[0] + jointR2 = jointsR[1] + self.assertFalse( jointR1 is None ) + self.assertFalse( jointR2 is None ) + self.assertTrue( jointR1.isEqual( one_joint )) + self.assertTrue( jointR2.isEqual( two_joint )) + pass + + def testMEDFileJoint1(self): + node_correspond=MEDFileJointCorrespondence(DataArrayInt([1,2,3,4,5,6,7,8])) + cell_correspond=MEDFileJointCorrespondence(DataArrayInt([9,10,11,12]),NORM_TRI3,NORM_TRI3) + cell_correspon2=MEDFileJointCorrespondence(DataArrayInt([9,10,11]),NORM_TRI3,NORM_TRI3) + cell_correspon3=MEDFileJointCorrespondence(DataArrayInt([9,10,11,12]),NORM_TRI3,NORM_QUAD4) + joint1st_1=MEDFileJointOneStep() + joint1st_1.pushCorrespondence(cell_correspond) + joint1st_1.pushCorrespondence(node_correspond) + joint1st_2=MEDFileJointOneStep() + joint1st_2.pushCorrespondence(cell_correspond) + joint1st_2.pushCorrespondence(node_correspond) + joint1st_3=MEDFileJointOneStep() + joint1st_3.pushCorrespondence(node_correspond) + joint1st_3.pushCorrespondence(cell_correspond) + joint1st_4=MEDFileJointOneStep() + joint1st_4.pushCorrespondence(cell_correspond) + joint1st_5=MEDFileJointOneStep() + joint1st_5.pushCorrespondence(cell_correspon2) + joint1st_6=MEDFileJointOneStep() + joint1st_6.pushCorrespondence(cell_correspon3) + self.assertTrue( joint1st_1.isEqual( joint1st_2 )) + self.assertTrue( joint1st_1.isEqual( joint1st_3 )) + self.assertFalse( joint1st_1.isEqual( joint1st_4 )) + self.assertFalse( joint1st_4.isEqual( joint1st_5 )) + self.assertFalse( joint1st_4.isEqual( joint1st_6 )) + one_joint=MEDFileJoint() + one_joint.pushStep(joint1st_1) + one_joint.setLocalMeshName("maa1") + one_joint.setRemoteMeshName("maa2") + one_joint.setDescription("joint_description") + one_joint.setJointName("joint_1") + one_joint.setDomainNumber(1) + self.assertEqual( "maa1", one_joint.getLocalMeshName()) + self.assertEqual( "maa2", one_joint.getRemoteMeshName()) + self.assertEqual( "joint_description", one_joint.getDescription()) + self.assertEqual( 1, one_joint.getDomainNumber()) + self.assertEqual( "joint_1", one_joint.getJointName()) + pass + + @unittest.skipUnless('linux'==platform.system().lower(),"stderr redirection not ported on Windows ?") + def testMEDFileSafeCall0(self): + """ EDF11242 : check status of MED file calls to detect problems immediately. Sorry this test generates awful messages !""" + fname="Pyfile94.med" + errfname="Pyfile94.err" + class StdOutRedirect(object): + def __init__(self,fileName): + import os,sys + sys.stderr.flush() + self.stdoutOld=os.dup(2) + self.fdOfSinkFile=os.open(fileName,os.O_CREAT | os.O_RDWR) + fd2=os.dup2(self.fdOfSinkFile,2) + self.origPyVal=sys.stderr + class FlushFile(object): + def __init__(self,f): + self.f=f + def write(self,st): + self.f.write(st) + self.f.flush() + def flush(self): + return self.f.flush() + def isatty(self): + return self.f.isatty() + sys.stderr=FlushFile(os.fdopen(self.fdOfSinkFile,"w")) + def __del__(self): + import os,sys + sys.stderr=self.origPyVal + #os.fsync(self.fdOfSinkFile) + os.fsync(2) + os.dup2(self.stdoutOld,2) + os.close(self.stdoutOld) + import os + # first clean file if needed + if os.path.exists(fname): + os.remove(fname) + pass + # second : build a file from scratch + m=MEDCouplingCMesh() + arr=DataArrayDouble(11) ; arr.iota() + m.setCoords(arr,arr) + mm=MEDFileCMesh() + mm.setMesh(m) + mm.setName("mesh") + mm.write(fname,2) + # third : change permissions to remove write access on created file + os.chmod(fname,0444) + # four : try to append data on file -> check that it raises Exception + f=MEDCouplingFieldDouble(ON_CELLS) + f.setName("field") + f.setMesh(m) + f.setArray(DataArrayDouble(100)) + f.getArray()[:]=100. + f.checkConsistencyLight() + f1ts=MEDFileField1TS() + f1ts.setFieldNoProfileSBT(f) + # redirect stderr + tmp=StdOutRedirect(errfname) + self.assertRaises(InterpKernelException,f1ts.write,fname,0) # it should raise ! + del tmp + # + if os.path.exists(errfname): + os.remove(errfname) + # + pass + + def testUnivStatus1(self): + """ Non regression test to check the effectiveness of univ write status.""" + fname="Pyfile95.med" + arr=DataArrayDouble(10) ; arr.iota() + m=MEDCouplingCMesh() ; m.setCoords(arr,arr) ; m.setName("mesh") + mm=MEDFileCMesh() ; mm.setMesh(m) + mm.setUnivNameWrStatus(False) # test is here + mm.write(fname,2) + mm=MEDFileCMesh(fname) + self.assertEqual(mm.getUnivName(),"") + mm.setUnivNameWrStatus(True) + mm.write(fname,2) + mm=MEDFileCMesh(fname) + self.assertTrue(mm.getUnivName()!="") + pass + + def testEmptyMesh(self): + """ MEDLoader should be able to consistently write and read an empty mesh (coords array + with 0 tuples """ + fname = "Pyfile96.med" + m = MEDCouplingUMesh('toto', 2) + m.setCoords(DataArrayDouble([], 0, 2)) + m.setConnectivity(DataArrayInt([]), DataArrayInt([0])) + mfu = MEDFileUMesh() + mfu.setMeshAtLevel(0, m) + mfu.write(fname, 2) + mfu2 = MEDFileUMesh(fname) + self.assertEqual('toto', mfu2.getName()) + lvl = mfu2.getNonEmptyLevels() + self.assertEqual((), lvl) + + @unittest.skipUnless(MEDCouplingHasNumPyBindings(),"requires numpy") + def testMEDFileUMeshPickeling2(self): + """ Check that pickalization can be performed on a unpickalized instance. Non regression test.""" + name="Mesh_1" + grpName1="HAUT" + grpName2="BASE" + hauteur=1. + nbOfNodesPerAxis=3 + arr=DataArrayDouble(nbOfNodesPerAxis) ; arr.iota() ; arr/=(nbOfNodesPerAxis-1) ; arr*=hauteur + m=MEDCouplingCMesh() ; m.setCoords(arr,arr,arr) ; m=m.buildUnstructured() ; m.setName(name) + mesh=MEDFileUMesh() ; mesh[0]=m + m1=m.computeSkin() ; mesh[-1]=m1 + # + bary1=m1.computeCellCenterOfMass()[:,2] + grp1=bary1.findIdsInRange(hauteur-1e-12,hauteur+1e-12) ; grp1.setName(grpName1) + grp2=bary1.findIdsInRange(0.-1e-12,0.+1e-12) ; grp2.setName(grpName2) + mesh.setGroupsAtLevel(-1,[grp1,grp2]) + + import cPickle + st=cPickle.dumps(mesh,2) + mm=cPickle.loads(st) + st2=cPickle.dumps(mm,2) + mm2=cPickle.loads(st2) + self.assertTrue(mesh.isEqual(mm2,1e-12)[0]) + pass + + def testMEDFileEquivalence1(self): + """ First check of equivalence implementation in MEDFileMesh""" + fileName="Pyfile97.med" + meshName="M_01" + mm=MEDFileUMesh() + coo=DataArrayDouble([(0,0,0),(6,0,0),(19,0,0),(36,0,0),(0,4,0),(6,4,0),(19,4,0),(36,4,0),(0,13,0),(6,13,0),(19,13,0),(36,13,0),(0,24,0),(6,24,0),(19,24,0),(36,24,0),(0,0,6),(6,0,6),(19,0,6),(36,0,6),(0,4,6),(6,4,6),(19,4,6),(36,4,6),(0,13,6),(6,13,6),(19,13,6),(36,13,6),(0,24,6),(6,24,6),(19,24,6),(36,24,6),(6,0,3),(6,2,0),(12.5,0,0),(19,0,3),(19,2,0),(6,4,3),(12.5,4,0),(19,4,3),(6,2,6),(12.5,0,6),(19,2,6),(12.5,4,6),(6,2,3),(12.5,0,3),(12.5,2,0),(19,2,3),(12.5,4,3),(12.5,2,6),(12.5,2,3)]) + coo.setInfoOnComponents(["X [Sans_unite]","Y [Sans_unite]","Z [Sans_unite]"]) + connQ4=DataArrayInt([1,17,21,5,2,18,22,6,21,5,6,22,1,32,44,33,17,40,44,32,21,37,44,40,5,33,44,37,2,35,47,36,18,42,47,35,22,39,47,42,6,36,47,39,21,37,48,43,5,38,48,37,6,39,48,38,22,43,48,39]) + m1=MEDCoupling1SGTUMesh(meshName,NORM_QUAD4) ; m1.setCoords(coo) ; m1.setNodalConnectivity(connQ4) ; mm[-1]=m1 + connH8=DataArrayInt([20,16,17,21,4,0,1,5,22,18,19,23,6,2,3,7,24,20,21,25,8,4,5,9,25,21,22,26,9,5,6,10,26,22,23,27,10,6,7,11,28,24,25,29,12,8,9,13,29,25,26,30,13,9,10,14,30,26,27,31,14,10,11,15,21,40,49,43,37,44,50,48,40,17,41,49,44,32,45,50,49,41,18,42,50,45,35,47,43,49,42,22,48,50,47,39,44,32,45,50,33,1,34,46,37,44,50,48,5,33,46,38,48,50,47,39,38,46,36,6,50,45,35,47,46,34,2,36]) + m0=MEDCoupling1SGTUMesh(meshName,NORM_HEXA8) ; m0.setCoords(coo) ; m0.setNodalConnectivity(connH8) ; mm[0]=m0 + mm.getFamilyFieldAtLevel(-1)[:]=-2 + mm.getFamilyFieldAtLevel(0)[:]=0 + mm.addFamily("HOMARD________-1",-1) + mm.addFamily("HOMARD________-2",-2) + mm.addFamily("HOMARD________-3",-3) + mm.setFamiliesIdsOnGroup("HOMARD",[-1,-2,-3]) + + eqName="MAILLES_A_RECOLLER_APRES_HOMARD" + descEq="Cette equivalence decrit les mailles a recoller. Dans chaque correspondance, le premier numero est celui de la maille coupee ; le second numero est celui d'une des petites mailles en regard." + mm.initializeEquivalences() + eqs=mm.getEquivalences() + eq0=eqs.appendEmptyEquivalenceWithName(eqName) + eq0.setDescription(descEq) + corr=DataArrayInt([(0,3),(0,4),(0,5),(0,6),(1,7),(1,8),(1,9),(1,10),(2,11),(2,12),(2,13),(2,14)]) + eq0.setArray(-1,corr) + self.assertEqual(eq0.getCell().size(),1) + self.assertTrue(eq0.getCell().getArray(NORM_QUAD4).isEqual(corr)) + eq0.getCell().clear() + self.assertEqual(eq0.getCell().size(),0) + eq0.getCell().setArrayForType(NORM_QUAD4,corr) + self.assertEqual(eq0.getCell().size(),1) + self.assertTrue(eq0.getCell().getArray(NORM_QUAD4).isEqual(corr)) + mm.killEquivalences() + mm.initializeEquivalences() + eqs=mm.getEquivalences() + eq0=eqs.appendEmptyEquivalenceWithName(eqName) + eq0.setDescription(descEq) + c=eq0.initCell() + c.setArrayForType(NORM_QUAD4,corr) + self.assertEqual(eq0.getCell().size(),1) + self.assertTrue(eq0.getCell().getArray(NORM_QUAD4).isEqual(corr)) + mm2=mm.deepCopy() + self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + self.assertEqual(mm2.getEquivalences().size(),1) + self.assertTrue(mm2.getEquivalences().getEquivalence(0).getCell().getArray(NORM_QUAD4).isEqual(corr)) + mm2.getEquivalences().getEquivalence(0).getCell().getArray(NORM_QUAD4)[0,0]=2 + self.assertTrue(not mm.isEqual(mm2,1e-12)[0]) + mm2.getEquivalences().getEquivalence(0).getCell().getArray(NORM_QUAD4)[0,0]=0 + self.assertTrue(mm.isEqual(mm2,1e-12)[0]) + mm.write(fileName,2) + # + mm3=MEDFileMesh.New(fileName) + self.assertTrue(mm.isEqual(mm3,1e-12)[0]) + pass + + def testMEDFileForFamiliesPlayer1(self): + """Non regression bug EDF11911. For serial killers using same family name to store both cells and nodes ! Only sky is the limit.""" + fileName="Pyfile98.med" + meshName="mesh" + magicSt="%s%%04i"%(MEDFileMesh.GetMagicFamilyStr()) + arr=DataArrayDouble(4) ; arr.iota() + m=MEDCouplingCMesh() ; m.setCoords(arr,arr) + m=m.buildUnstructured() + mm=MEDFileUMesh() + mm[0]=m + mm.setName(meshName) + mm.setFamilyId("FAMILLE_ZERO",0) + mm.getFamilyFieldAtLevel(0)[-3:]=-4 + mm.setFamilyId("RIDF%s"%(magicSt%0),-4) + mm.setGroupsOnFamily("RIDF%s"%(magicSt%0),["RID"]) + d=DataArrayInt(16) ; d[:]=0 ; d[[1,2,4,5]]=3 + mm.setFamilyFieldArr(1,d) + mm.setFamilyId("RIDF%s"%(magicSt%1),3) + mm.setGroupsOnFamily("RIDF%s"%(magicSt%1),["RID"]) + self.assertEqual(mm.getFamiliesNames(),("FAMILLE_ZERO",'RIDF!/__\\!0000','RIDF!/__\\!0001')) + self.assertEqual(mm.getFamiliesNamesWithFilePointOfView(),("FAMILLE_ZERO","RIDF","RIDF")) # <- the aim of test is here ! + self.assertEqual(mm.getFamiliesIdsOnGroup("RID"),(-4,3)) + mm.write(fileName,2) + # now read such funny file ! + mm2=MEDFileMesh.New(fileName) # <- normaly mdump of Pyfile98.med must contain only RID and FAMILLE_ZERO families. + self.assertTrue(mm.isEqual(mm2,1e-16)) + self.assertEqual(mm2.getFamiliesNames(),("FAMILLE_ZERO",'RIDF!/__\\!0000','RIDF!/__\\!0001')) + self.assertEqual(mm2.getFamiliesNamesWithFilePointOfView(),("FAMILLE_ZERO","RIDF","RIDF")) + self.assertEqual(mm2.getFamiliesIdsOnGroup("RID"),(-4,3))# <- very important too ! + pass + + def testCartesianizer1(self): + """ This test is advanced to be sure that no unnecessary copies had been made during cartesianization process. """ + # UMesh non cart + arr=DataArrayDouble(4) ; arr.iota() ; m=MEDCouplingCMesh() ; m.setCoords(arr,arr) ; m=m.buildUnstructured() + mm=MEDFileUMesh() ; mm[0]=m ; mm.forceComputationOfParts() + d0=DataArrayInt(16) ; d0[:]=0 + d1=DataArrayInt(9) ; d1[:]=0 + mm.setFamilyFieldArr(0,d1) ; mm.setFamilyFieldArr(1,d0) + mm.setName("a") ; mm.setDescription("b") ; mm.setTime(3,4,5.) ; mm.addFamily("c",-4) ; mm.setFamiliesOnGroup("d",["c"]) ; mm.setTimeUnit("ms") + ref0=mm.getCoords().getHiddenCppPointer() + ref1=mm[0].getNodalConnectivity().getHiddenCppPointer() + self.assertEqual(ref0,mm[0].getCoords().getHiddenCppPointer()) + ref2=mm[0].getNodalConnectivityIndex().getHiddenCppPointer() + ref3=mm.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getNodalConnectivity().getHiddenCppPointer() + self.assertEqual(ref0,mm.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getCoords().getHiddenCppPointer()) + mm.setAxisType(AX_CYL) #<- important + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + mm.setAxisType(AX_CART) # this is here only to avoid complaints + self.assertTrue(isinstance(mm2,MEDFileUMesh)) + self.assertTrue(mm.getHiddenCppPointer()!=mm2.getHiddenCppPointer()) + self.assertTrue(ref0==mm.getCoords().getHiddenCppPointer()) # <- here important + self.assertTrue(ref0!=mm2.getCoords().getHiddenCppPointer()) # <- here important + self.assertEqual(mm2.getCoords().getHiddenCppPointer(),mm2[0].getCoords().getHiddenCppPointer()) + self.assertEqual(mm2.getCoords().getHiddenCppPointer(),mm2.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getCoords().getHiddenCppPointer()) + self.assertEqual(mm2[0].getNodalConnectivity().getHiddenCppPointer(),ref1) # <- here very important + self.assertEqual(mm2[0].getNodalConnectivityIndex().getHiddenCppPointer(),ref2) # <- here very important + self.assertEqual(mm2.getDirectUndergroundSingleGeoTypeMesh(NORM_QUAD4).getNodalConnectivity().getHiddenCppPointer(),ref3) # <- here very important + self.assertEqual(mm2.getName(),mm.getName()) + self.assertEqual(mm2.getDescription(),mm.getDescription()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTimeUnit(),mm.getTimeUnit()) + self.assertEqual(mm2.getGroupsNames(),mm.getGroupsNames()) + self.assertEqual(mm2.getFamiliesNames(),mm.getFamiliesNames()) + self.assertEqual([mm2.getFamilyId(elt) for elt in mm2.getFamiliesNames()],[mm.getFamilyId(elt2) for elt2 in mm.getFamiliesNames()]) + self.assertEqual(mm.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) # <- here very important + self.assertEqual(mm.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) # <- here very important + # UMesh cart + mm.setAxisType(AX_CART) + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileUMesh)) + self.assertTrue(mm.getHiddenCppPointer()==mm2.getHiddenCppPointer()) # optimization + # CurveLinearMesh non cart + arr=DataArrayDouble(4) ; arr.iota() ; m=MEDCouplingCMesh() ; m.setCoords(arr,arr) ; m=m.buildCurveLinear() + mm=MEDFileCurveLinearMesh() ; mm.setMesh(m) ; mm.setAxisType(AX_CYL) #<- important + mm.setFamilyFieldArr(0,d1) ; mm.setFamilyFieldArr(1,d0) + mm.setName("a") ; mm.setDescription("b") ; mm.setTime(3,4,5.) ; mm.addFamily("c",-4) ; mm.setFamiliesOnGroup("d",["c"]) ; mm.setTimeUnit("ms") + ref0=mm.getMesh().getCoords().getHiddenCppPointer() + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCurveLinearMesh)) + self.assertTrue(mm.getHiddenCppPointer()!=mm2.getHiddenCppPointer()) + self.assertTrue(ref0==mm.getMesh().getCoords().getHiddenCppPointer()) # <- here important + self.assertTrue(ref0!=mm2.getMesh().getCoords().getHiddenCppPointer()) # <- here important + self.assertEqual(mm2.getMesh().getNodeGridStructure(),mm.getMesh().getNodeGridStructure()) + self.assertEqual(mm2.getName(),mm.getName()) + self.assertEqual(mm2.getDescription(),mm.getDescription()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTimeUnit(),mm.getTimeUnit()) + self.assertEqual(mm2.getGroupsNames(),mm.getGroupsNames()) + self.assertEqual(mm2.getFamiliesNames(),mm.getFamiliesNames()) + self.assertEqual([mm2.getFamilyId(elt) for elt in mm2.getFamiliesNames()],[mm.getFamilyId(elt2) for elt2 in mm.getFamiliesNames()]) + self.assertEqual(mm.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) # <- here very important + self.assertEqual(mm.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) # <- here very important + # CurveLinearMesh cart + mm.setAxisType(AX_CART) + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCurveLinearMesh)) + self.assertTrue(mm.getHiddenCppPointer()==mm2.getHiddenCppPointer()) # optimization + # CMesh non cart + arr=DataArrayDouble(4) ; arr.iota() ; m=MEDCouplingCMesh() ; m.setCoords(arr,arr) + mm=MEDFileCMesh() ; mm.setMesh(m) ; mm.setAxisType(AX_CYL) #<- important + mm.setFamilyFieldArr(0,d1) ; mm.setFamilyFieldArr(1,d0) + mm.setName("a") ; mm.setDescription("b") ; mm.setTime(3,4,5.) ; mm.addFamily("c",-4) ; mm.setFamiliesOnGroup("d",["c"]) ; mm.setTimeUnit("ms") + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCurveLinearMesh)) + self.assertEqual(mm2.getMesh().getNodeGridStructure(),mm.getMesh().getNodeGridStructure()) + self.assertEqual(mm2.getName(),mm.getName()) + self.assertEqual(mm2.getDescription(),mm.getDescription()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTime(),mm.getTime()) + self.assertEqual(mm2.getTimeUnit(),mm.getTimeUnit()) + self.assertEqual(mm2.getGroupsNames(),mm.getGroupsNames()) + self.assertEqual(mm2.getFamiliesNames(),mm.getFamiliesNames()) + self.assertEqual([mm2.getFamilyId(elt) for elt in mm2.getFamiliesNames()],[mm.getFamilyId(elt2) for elt2 in mm.getFamiliesNames()]) + self.assertEqual(mm.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(0).getHiddenCppPointer(),d1.getHiddenCppPointer()) # <- here very important + self.assertEqual(mm.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) + self.assertEqual(mm2.getFamilyFieldAtLevel(1).getHiddenCppPointer(),d0.getHiddenCppPointer()) # <- here very important + # CMesh cart + mm.setAxisType(AX_CART) + mm2=mm.cartesianize() # the trigger + self.assertEqual(mm2.getAxisType(),AX_CART) + self.assertTrue(isinstance(mm2,MEDFileCMesh)) + self.assertTrue(mm.getHiddenCppPointer()==mm2.getHiddenCppPointer()) # optimization + pass + + def testCheckCoherency(self): + m2 = MEDCouplingUMesh("2d", 2) + m2.setCoords(DataArrayDouble([(0.0, 1.0)] * 4, 4,2)) # whatever + m2.setConnectivity(DataArrayInt([NORM_TRI3, 0,1,2,NORM_TRI3, 1,2,3]), DataArrayInt(([0,4,8]))) + m1 , _, _ , _, _ = m2.buildDescendingConnectivity() + mum = MEDFileUMesh() + mum.setMeshAtLevel(0, m2) + mum.setMeshAtLevel(-1, m1) + mum.checkConsistency() + mum2 = mum.deepCopy() + + # Nodes + arr = DataArrayInt([2]*4) + mum.setFamilyFieldArr(1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*4) + mum.setRenumFieldArr(1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + mum.setRenumFieldArr(1, DataArrayInt([2]*4)) + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayAsciiChar(['tutu x']*4) + mum.setNameFieldAtLevel(1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + + # 2D + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*2) + mum.setFamilyFieldArr(0, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*2) + mum.setRenumFieldArr(0, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + mum.setRenumFieldArr(0, DataArrayInt([2]*2)) + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayAsciiChar(['tutu x']*2) + mum.setNameFieldAtLevel(0, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + + # 1D + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*5) + mum.setFamilyFieldArr(-1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayInt([2]*5) + mum.setRenumFieldArr(-1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + mum.setRenumFieldArr(-1, DataArrayInt([2]*5)) + self.assertRaises(InterpKernelException, mum.checkConsistency) + mum=mum2; mum2=mum.deepCopy(); + arr = DataArrayAsciiChar(['tutu x']*5) + mum.setNameFieldAtLevel(-1, arr); arr.reAlloc(35); + self.assertRaises(InterpKernelException, mum.checkConsistency) + + def testCheckSMESHConsistency(self): + m2 = MEDCouplingUMesh("2d", 2) + m2.setCoords(DataArrayDouble([(0.0, 1.0)] * 4, 4,2)) # whatever + m2.setConnectivity(DataArrayInt([NORM_TRI3, 0,1,2,NORM_TRI3, 1,2,3]), DataArrayInt(([0,4,8]))) + m1 , _, _ , _, _ = m2.buildDescendingConnectivity() + mum = MEDFileUMesh() + mum.setMeshAtLevel(0, m2) + mum.setMeshAtLevel(-1, m1) + mum.checkConsistency() + mum.checkSMESHConsistency() + n2 = DataArrayInt(m2.getNumberOfCells(), 1); n2.iota(1) + n1 = DataArrayInt(m1.getNumberOfCells(), 1); n1.iota(1) + mum.setRenumFieldArr(0, n2) + mum.setRenumFieldArr(-1, n1) + self.assertRaises(InterpKernelException, mum.checkSMESHConsistency) + mum.setRenumFieldArr(-1, n1+100) + mum.checkSMESHConsistency() + pass + + def testClearNodeAndCellNumbers(self): + m2 = MEDCouplingUMesh("2d", 2) + m2.setCoords(DataArrayDouble([(0.0, 1.0)] * 4, 4,2)) # whatever + m2.setConnectivity(DataArrayInt([NORM_TRI3, 0,1,2,NORM_TRI3, 1,2,3]), DataArrayInt(([0,4,8]))) + m1 , _, _ , _, _ = m2.buildDescendingConnectivity() + mum = MEDFileUMesh() + mum.setMeshAtLevel(0, m2) + mum.setMeshAtLevel(-1, m1) + mum.checkConsistency() + n2 = DataArrayInt(m2.getNumberOfCells(), 1); n2.iota(1) + n1 = DataArrayInt(m1.getNumberOfCells(), 1); n1.iota(1) + mum.setRenumFieldArr(0, n2) + mum.setRenumFieldArr(-1, n1) + mum.clearNodeAndCellNumbers() + mum.checkSMESHConsistency() + pass + + def testCMeshSetFamilyFieldArrNull(self): + meshName="mesh" + fname="Pyfile99.med" + arrX=DataArrayDouble([0,1,2,3]) + arrY=DataArrayDouble([0,1,2]) + m=MEDCouplingCMesh() ; m.setCoords(arrX,arrY) ; m.setName(meshName) + mm=MEDFileCMesh() ; mm.setMesh(m) + famCellIds=DataArrayInt([0,-2,-2,-1,-2,0]) + famNodeIds=DataArrayInt([0,0,0,3,4,1,2,7,2,1,0,0]) + mm.setFamilyFieldArr(0,famCellIds) + mm.setFamilyFieldArr(1,famNodeIds) + mm.write(fname,2) + mm=MEDFileMesh.New(fname) + self.assertTrue(mm.getFamilyFieldAtLevel(0) is not None) + self.assertTrue(mm.getFamilyFieldAtLevel(1) is not None) + mm.setFamilyFieldArr(0,None)#<- bug was here + mm.setFamilyFieldArr(1,None)#<- bug was here + self.assertTrue(mm.getFamilyFieldAtLevel(0) is None) + self.assertTrue(mm.getFamilyFieldAtLevel(1) is None) + mm3=mm.deepCopy() + self.assertTrue(mm3.getFamilyFieldAtLevel(0) is None) + self.assertTrue(mm3.getFamilyFieldAtLevel(1) is None) + mm.write(fname,2) + mm2=MEDFileMesh.New(fname) + self.assertTrue(mm2.getFamilyFieldAtLevel(0) is None) + self.assertTrue(mm2.getFamilyFieldAtLevel(1) is None) + pass + + def testAppendFieldProfileOnIntField(self): + fname="Pyfile100.med" + arrX=DataArrayDouble([0,1,2,3]) + arrY=DataArrayDouble([0,1,2]) + mesh=MEDCouplingCMesh() ; mesh.setCoords(arrX,arrY) ; mesh.setName("Mesh") + mm=MEDFileCMesh() + mm.setMesh(mesh) + # + fmts=MEDFileIntFieldMultiTS() + pflName="PFL" + pfl=DataArrayInt([1,3,5]) ; pfl.setName(pflName) + f=MEDCouplingFieldInt(ON_CELLS) ; f.setMesh(mesh) + fieldName="FieldOnCell" + f.setTime(1.2,1,1) ; f.setName(fieldName) + arr=DataArrayInt([101,102,103]) ; f.setArray(arr) + fmts.appendFieldProfile(f,mm,0,pfl) + # + mm.write(fname,2) + fmts.write(fname,0) + # + mm=MEDFileMesh.New(fname) + fmts=MEDFileAnyTypeFieldMultiTS.New(fname) + self.assertTrue(isinstance(fmts,MEDFileIntFieldMultiTS)) + self.assertEqual(fmts.getName(),fieldName) + self.assertEqual(len(fmts),1) + f1ts=fmts[0] + ftest,pfltest=f1ts.getFieldWithProfile(ON_CELLS,0,mm) + self.assertEqual(pfltest.getName(),pflName) + self.assertEqual(ftest.getName(),fieldName) + self.assertTrue(ftest.isEqualWithoutConsideringStr(arr)) + ftest2=f1ts.getFieldOnMeshAtLevel(ON_CELLS,0,mm) + self.assertTrue(ftest2.getArray().isEqualWithoutConsideringStr(arr)) + self.assertEqual(ftest2.getTime(),f.getTime()) + self.assertEqual(ftest2.getMesh().getNumberOfCells(),len(arr)) + pass + + def testMEDFileFieldEasyField1(self): + """Check for all spatial discretization of field (cells,nodes,elno,gauss) for double field that all is OK. Here no profile and only top level is considered.""" + ## Basic test on cells on top level + fname="Pyfile101.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[0]=m + mm.write(fname,2) + arr0=DataArrayDouble([10,11,12,13,100,101]) + f=MEDCouplingFieldDouble(ON_CELLS) ; f.setArray(arr0) ; f.setMesh(m) + f.setName(fieldName) ; f.setTime(2.,6,7) + f0=f.deepCopy() + ff=MEDFileFieldMultiTS() ; ff.appendFieldNoProfileSBT(f) + ff.write(fname,0) + arr2=arr0+1000 ; f.setArray(arr2) + f.setTime(3.,8,9) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f) + ff.write(fname,0) + f1=f.deepCopy() + ## + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,6,7) + ftst0=f1ts.field(mm) + self.assertTrue(f0.isEqual(ftst0,1e-12,1e-12)) + f1ts=MEDFileField1TS(fname,fieldName,8,9) + ftst1=f1ts.field(mm) + self.assertTrue(f1.isEqual(ftst1,1e-12,1e-12)) + fmts=MEDFileFieldMultiTS(fname,fieldName) + self.assertTrue(f1.isEqual(fmts.field(8,9,mm),1e-12,1e-12)) + ## Basic test on nodes on top level + f2=MEDCouplingFieldDouble(ON_NODES) ; arr2=DataArrayDouble([200,201,202]) ; arr2.setInfoOnComponent(0,"tutu") ; f2.setArray(arr2) ; f2.setMesh(m) ; f2.setTime(22.,23,24) + f2.setName(fieldName) + mm.write(fname,2) + ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f2) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,23,24) + self.assertTrue(f2.isEqual(f1ts.field(mm),1e-12,1e-12)) + fmts=MEDFileFieldMultiTS(fname,fieldName) + self.assertTrue(f2.isEqual(fmts.field(23,24,mm),1e-12,1e-12)) + ## Node on elements + f3=MEDCouplingFieldDouble(ON_GAUSS_NE) ; f3.setMesh(m) ; arr3=DataArrayDouble([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,1e-12)) + ## Gauss + f4=MEDCouplingFieldDouble(ON_GAUSS_PT) ; f4.setMesh(m) ; f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayDouble([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testMEDFileFieldEasyField2(self): + """Same thantestMEDFileFieldEasyField1 except that here intfields are considered. + Check for all spatial discretization of field (cells,nodes,elno,gauss) for int field that all is OK. Here no profile and only top level is considered.""" + ## Basic test on cells on top level + fname="Pyfile102.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[0]=m + mm.write(fname,2) + arr0=DataArrayInt([10,11,12,13,100,101]) + f=MEDCouplingFieldInt(ON_CELLS) ; f.setArray(arr0) ; f.setMesh(m) + f.setName(fieldName) ; f.setTime(2.,6,7) + f0=f.deepCopy() + ff=MEDFileIntFieldMultiTS() ; ff.appendFieldNoProfileSBT(f) + ff.write(fname,0) + arr2=arr0+1000 ; f.setArray(arr2) + f.setTime(3.,8,9) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f) + ff.write(fname,0) + f1=f.deepCopy() + ## + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,6,7) + ftst0=f1ts.field(mm) + self.assertTrue(f0.isEqual(ftst0,1e-12,1e-12)) + f1ts=MEDFileIntField1TS(fname,fieldName,8,9) + ftst1=f1ts.field(mm) + self.assertTrue(f1.isEqual(ftst1,1e-12,1e-12)) + fmts=MEDFileIntFieldMultiTS(fname,fieldName) + self.assertTrue(f1.isEqual(fmts.field(8,9,mm),1e-12,1e-12)) + ## Basic test on nodes on top level + f2=MEDCouplingFieldInt(ON_NODES) ; arr2=DataArrayInt([200,201,202]) ; arr2.setInfoOnComponent(0,"tutu") ; f2.setArray(arr2) ; f2.setMesh(m) ; f2.setTime(22.,23,24) + f2.setName(fieldName) + mm.write(fname,2) + ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f2) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,23,24) + self.assertTrue(f2.isEqual(f1ts.field(mm),1e-12,1e-12)) + fmts=MEDFileIntFieldMultiTS(fname,fieldName) + self.assertTrue(f2.isEqual(fmts.field(23,24,mm),1e-12,1e-12)) + ## Node on elements + f3=MEDCouplingFieldInt(ON_GAUSS_NE) ; f3.setMesh(m) ; arr3=DataArrayInt([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,1e-12)) + ## Gauss + f4=MEDCouplingFieldInt(ON_GAUSS_PT) ; f4.setMesh(m) ; f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayInt([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) + f1ts=MEDFileIntField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testMEDFileFieldEasyField3(self): + """Here a multi level mesh. And field on cells lying on different level of this mesh. Show how "field" method deal with that. Here on field double are considered.""" + fname="Pyfile103.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[-1]=m + m0=MEDCouplingUMesh("mesh",3) ; m0.setCoords(coo) + m0.allocateCells() + m0.insertNextCell(NORM_TETRA4,[3,2,5,0]) + m0.insertNextCell(NORM_TETRA4,[7,6,3,2]) + mm[0]=m0 + mm.write(fname,2) + # start slowly + f1=MEDCouplingFieldDouble(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayDouble([(0,100),(1,101)])) ; f1.setMesh(mm[0]) ; f1.setTime(4.,1,2) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,1,2) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,1e-12)) + # here f1 lying on level -1 not 0 check if "field" method detect it ! + f1=MEDCouplingFieldDouble(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayDouble([(0,100),(1,101),(0,100),(1,101),(0,100),(1,101)])) + f1.setMesh(mm[-1]) # -1 is very important + f1.setTime(16.,3,4) + f1.checkConsistencyLight() + mm.write(fname,2) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,3,4) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,1e-12)) + # nodes on elements + f3=MEDCouplingFieldDouble(ON_GAUSS_NE) + f3.setMesh(mm[-1]) # this line is important + arr3=DataArrayDouble([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,1e-12)) + # gauss + f4=MEDCouplingFieldDouble(ON_GAUSS_PT) + f4.setMesh(mm[-1]) # this line is important + f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayDouble([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testMEDFileFieldEasyField4(self): + """ Same than testMEDFileFieldEasyField3 but with integers""" + fname="Pyfile104.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[-1]=m + m0=MEDCouplingUMesh("mesh",3) ; m0.setCoords(coo) + m0.allocateCells() + m0.insertNextCell(NORM_TETRA4,[3,2,5,0]) + m0.insertNextCell(NORM_TETRA4,[7,6,3,2]) + mm[0]=m0 + mm.write(fname,2) + # start slowly + f1=MEDCouplingFieldInt(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayInt([(0,100),(1,101)])) ; f1.setMesh(mm[0]) ; f1.setTime(4.,1,2) + f1ts=MEDFileIntField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,1,2) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,1e-12)) + # here f1 lying on level -1 not 0 check if "field" method detect it ! + f1=MEDCouplingFieldInt(ON_CELLS) ; f1.setName(fieldName) ; f1.setArray(DataArrayInt([(0,100),(1,101),(0,100),(1,101),(0,100),(1,101)])) + f1.setMesh(mm[-1]) # -1 is very important + f1.setTime(16.,3,4) + f1.checkConsistencyLight() + mm.write(fname,2) + f1ts=MEDFileIntField1TS() ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,3,4) + self.assertTrue(f1.isEqual(f1ts.field(mm),1e-12,1e-12)) + # nodes on elements + f3=MEDCouplingFieldInt(ON_GAUSS_NE) + f3.setMesh(mm[-1]) # this line is important + arr3=DataArrayInt([0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19]) ; f3.setArray(arr3) ; f3.setTime(0.5,2,3) + f3.setName(fieldName) ; f3.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f3) ; ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,2,3) + self.assertTrue(f3.isEqual(f1ts.field(mm),1e-12,1e-12)) + # gauss + f4=MEDCouplingFieldInt(ON_GAUSS_PT) + f4.setMesh(mm[-1]) # this line is important + f4.setName(fieldName) + f4.setGaussLocalizationOnType(NORM_TRI3,[0.,0.,1.,0.,1.,1.],[0.1,0.1, 0.2,0.2, 0.3,0.3, 0.4,0.4, 0.5,0.5],[0.2,0.3,0.1,0.05,0.35]) + f4.setGaussLocalizationOnType(NORM_QUAD4,[0.,0.,1.,0.,1.,1.,0.,1.],[0.3,0.4, 0.6,0.7],[0.7,0.3]) ; f4.setTime(0.25,4,5) + arr4=DataArrayInt([0,1,2,3,4 ,10,11,12,13,14, 20,21,22,23,24, 30,31,32,33,34, 45,46, 55,56]) ; arr4.setInfoOnComponent(0,"abc") ; f4.setArray(arr4) + f4.checkConsistencyLight() + mm.write(fname,2) ; ff=MEDFileIntField1TS() ; ff.setFieldNoProfileSBT(f4) ; ff.write(fname,0) + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileIntField1TS(fname,fieldName,4,5) + self.assertTrue(f4.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testMEDFileFieldEasyField5(self): + """More and more difficult now look at how profiles are managed by "field" method.""" + fname="Pyfile105.med" + fieldName="field1" + mm=MEDFileUMesh() + coo=DataArrayDouble([(3,2,1),(8,7,6),(5,9,10)]) + m=MEDCouplingUMesh("mesh",2) ; m.setCoords(coo) + m.allocateCells() + m.insertNextCell(NORM_TRI3,[0,1,2]) + m.insertNextCell(NORM_TRI3,[3,4,5]) + m.insertNextCell(NORM_TRI3,[6,7,8]) + m.insertNextCell(NORM_TRI3,[9,10,11]) + m.insertNextCell(NORM_QUAD4,[100,101,102,103]) + m.insertNextCell(NORM_QUAD4,[104,105,106,107]) + mm[0]=m + mm.write(fname,2) + pfl=DataArrayInt([0,2,3,5]) ; pfl.setName("pfl") + m2=m.deepCopy()[pfl] ; m2.setName(m.getName()) + # + arr0=DataArrayDouble([10,11,12,13]) + f=MEDCouplingFieldDouble(ON_CELLS) ; f.setArray(arr0) ; f.setMesh(m2) + f.setName(fieldName) ; f.setTime(2.,6,7) ; f.checkConsistencyLight() + ff=MEDFileFieldMultiTS() ; ff.appendFieldProfile(f,mm,0,pfl) # ff is a field on profile + ff.write(fname,0) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,6,7) + self.assertTrue(f.isEqual(f1ts.field(mm),1e-12,1e-12)) + # more complicated -> multi level + m0=MEDCouplingUMesh("mesh",3) ; m0.setCoords(coo) + m0.allocateCells() + m0.insertNextCell(NORM_TETRA4,[3,2,5,0]) + m0.insertNextCell(NORM_TETRA4,[7,6,3,2]) + mm2=MEDFileUMesh() + mm2[0]=m0 ; mm2[-1]=m + # + ff=MEDFileField1TS() ; ff.setFieldProfile(f,mm2,-1,pfl) + # + mm=MEDFileMesh.New(fname) ; f1ts=MEDFileField1TS(fname,fieldName,6,7) + self.assertTrue(f.isEqual(f1ts.field(mm),1e-12,1e-12)) + pass + + def testExtractPart1(self): + coo=DataArrayDouble([(0,0),(1,0),(2,0),(3,0),(4,0),(0,1),(1,1),(2,1),(3,1),(4,1),(0,2),(1,2),(2,2),(3,2),(4,2)]) + meshName="mesh" + m0=MEDCouplingUMesh(meshName,2) ; m0.setCoords(coo) ; m0.allocateCells() + m0.insertNextCell(NORM_TRI3,[8,4,3]) + m0.insertNextCell(NORM_TRI3,[8,9,4]) + m0.insertNextCell(NORM_TRI3,[7,13,8]) + m0.insertNextCell(NORM_TRI3,[7,12,13]) + m0.insertNextCell(NORM_TRI3,[0,6,1]) + m0.insertNextCell(NORM_TRI3,[0,5,6]) + m0.insertNextCell(NORM_QUAD4,[1,6,7,2]) + m0.insertNextCell(NORM_QUAD4,[2,7,8,3]) + m0.insertNextCell(NORM_QUAD4,[8,13,14,9]) + m0.insertNextCell(NORM_QUAD4,[6,11,12,7]) + m0.insertNextCell(NORM_QUAD4,[5,10,11,6]) + # + m1=MEDCouplingUMesh(meshName,1) ; m1.setCoords(coo) ; m1.allocateCells() + m1.insertNextCell(NORM_SEG2,[10,5]) + m1.insertNextCell(NORM_SEG2,[5,0]) + m1.insertNextCell(NORM_SEG2,[0,1]) + m1.insertNextCell(NORM_SEG2,[1,2]) + m1.insertNextCell(NORM_SEG2,[2,3]) + m1.insertNextCell(NORM_SEG2,[3,4]) + m1.insertNextCell(NORM_SEG2,[4,9]) + m1.insertNextCell(NORM_SEG2,[9,14]) + m1.insertNextCell(NORM_SEG2,[14,13]) + m1.insertNextCell(NORM_SEG2,[13,12]) + m1.insertNextCell(NORM_SEG2,[12,11]) + m1.insertNextCell(NORM_SEG2,[11,10]) + mm=MEDFileUMesh() + mm[0]=m0 ; mm[-1]=m1 + arr0=DataArrayInt([0,1,2,3,4,6,7,8,12,13]) + tab={} # + tab[0]=DataArrayInt([0,2,3,4,6,7]) + tab[-1]=DataArrayInt([2,3,4,5,9]) + fs=MEDFileFields() + self.assertTrue(mm.deduceNodeSubPartFromCellSubPart(tab).isEqual(arr0)) + tab[1]=arr0 + # + fname0="Field0" + fmts=MEDFileFieldMultiTS() ; fs.pushField(fmts) + t0=(16.5,3,4) + ic=["toto [m]"] + arr0_0=DataArrayDouble([100,101,102,103,104,105,106,107,108,109,110]) ; arr0_0.setInfoOnComponents(ic) + f0=MEDCouplingFieldDouble(ON_CELLS) ; f0.setTime(*t0) ; f0.setArray(arr0_0) + f0.setMesh(m0) ; f0.setName(fname0) + f1=MEDCouplingFieldDouble(ON_CELLS) ; f1.setTime(*t0) ; f1.setArray(DataArrayDouble([200,201,202,203,204,205,206,207,208,209,210,211])) + f1.setMesh(m1) ; f1.setName(fname0) ; f1.getArray().setInfoOnComponents(ic) + f2=MEDCouplingFieldDouble(ON_NODES) ; f2.setTime(*t0) ; f2.setArray(DataArrayDouble([300,301,302,303,304,305,306,307,308,309,310,311,312,313,314])) + f2.setMesh(m0) ; f2.setName(fname0) ; f2.getArray().setInfoOnComponents(ic) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f0) ; f1ts.setFieldNoProfileSBT(f1) ; f1ts.setFieldNoProfileSBT(f2) + fmts.pushBackTimeStep(f1ts) + # + mmOut=mm.extractPart(tab) + # + fsPart0=fs.extractPart(tab,mm) + self.assertEqual(len(fsPart0),1) + fmtsP=fsPart0[0] + self.assertEqual(len(fmtsP),1) + f1ts=fmtsP[0] + self.assertRaises(InterpKernelException,f1ts.field,mmOut) + # + self.assertTrue(mmOut[0].computeCellCenterOfMass().isEqual(m0[tab[0]].computeCellCenterOfMass(),1e-12)) + self.assertTrue(mmOut[-1].computeCellCenterOfMass().isEqual(m1[tab[-1]].computeCellCenterOfMass(),1e-12)) + # + m0Part=m0.deepCopy()[tab[0]] ; m0Part.renumberNodes(tab[1].invertArrayN2O2O2N(mm.getNumberOfNodes()),len(tab[1])) ; m0Part.setName(m0.getName()) + self.assertTrue(mmOut[0].isEqual(m0Part,1e-12)) + m1Part=m1.deepCopy()[tab[-1]] ; m1Part.renumberNodes(tab[1].invertArrayN2O2O2N(mm.getNumberOfNodes()),len(tab[1])) ; m1Part.setName(m0.getName()) + self.assertTrue(mmOut[0].isEqual(m0Part,1e-12)) + self.assertTrue(mmOut[-1].isEqual(m1Part,1e-12)) + # + f0Part=f1ts.getFieldOnMeshAtLevel(ON_CELLS,0,mmOut) ; f0Part.checkConsistencyLight() + self.assertEqual(f0Part.getTypeOfField(),ON_CELLS) + self.assertTrue(f0Part.getMesh().isEqual(m0Part,1e-12)) + arr0Exp=DataArrayDouble([100,102,103,104,106,107]) ; arr0Exp.setInfoOnComponents(ic) + self.assertTrue(f0Part.getArray().isEqual(arr0Exp,1e-12)) ; self.assertEqual(f0Part.getTime(),list(t0)) + f1Part=f1ts.getFieldOnMeshAtLevel(ON_CELLS,-1,mmOut) ; f1Part.checkConsistencyLight() + self.assertEqual(f1Part.getTypeOfField(),ON_CELLS) + self.assertTrue(f1Part.getMesh().isEqual(m1Part,1e-12)) + arr1Exp=DataArrayDouble([202,203,204,205,209]) ; arr1Exp.setInfoOnComponents(ic) + self.assertTrue(f1Part.getArray().isEqual(arr1Exp,1e-12)) ; self.assertEqual(f1Part.getTime(),list(t0)) + # + f2Part=f1ts.getFieldOnMeshAtLevel(ON_NODES,0,mmOut) ; f2Part.checkConsistencyLight() + arr2Exp=DataArrayDouble([300,301,302,303,304,306,307,308,312,313]) ; arr2Exp.setInfoOnComponents(ic) + self.assertTrue(f2Part.getArray().isEqual(arr2Exp,1e-12)) ; self.assertEqual(f2Part.getTime(),list(t0)) + # multisteps + fs=MEDFileFields() ; fmts=MEDFileFieldMultiTS() ; fs.pushField(fmts) + tss=[(16.5,3,4),(17.5,4,5),(18.5,5,6)] + for i,tt in enumerate(tss): + f0=MEDCouplingFieldDouble(ON_CELLS) ; f0.setTime(*tt) + myarr=arr0_0+i*1000. + f0.setArray(myarr) + f0.setMesh(m0) ; f0.setName(fname0) ; f0.getArray().setInfoOnComponents(ic) + f1ts=MEDFileField1TS() ; f1ts.setFieldNoProfileSBT(f0) ; fmts.pushBackTimeStep(f1ts) + pass + fsPart1=fs.extractPart(tab,mm) + self.assertEqual(len(fsPart1),1) + fmtsP=fsPart1[0] + self.assertEqual(len(fmtsP),len(tss)) + for i,(f1tsP,tt) in enumerate(zip(fmtsP,tss)): + fPart=f1tsP.field(mmOut) ; fPart.checkConsistencyLight() + self.assertEqual(fPart.getTypeOfField(),ON_CELLS) + arr0Exp=DataArrayDouble([100,102,103,104,106,107]) ; arr0Exp.setInfoOnComponents(ic) ; arr0Exp+=i*1000. + self.assertTrue(fPart.getMesh().isEqual(m0Part,1e-12)) + self.assertTrue(fPart.getArray().isEqual(arr0Exp,1e-12)) + self.assertEqual(fPart.getTime(),list(tt)) + pass + pass + + def testSymmetryPlusAggregationMFD1(self): + """ Testing of MEDFileData::Aggregate and MEDFileUMesh::Aggregate and MEDFileUMesh::getAllDistributionOfType """ + fname1="Pyfile106_1.med" + fname2="Pyfile106_2.med" + fname3="Pyfile106_3.med" + meshName="mesh" + mm1=MEDFileUMesh() + da1=DataArrayDouble([1,2,10,3,4,11,5,6,12,7,8,13],4,3) ; da1.setInfoOnComponents(["aa [m]","bbb [kg]","cccc [MW]"]) + mm1.setCoords(da1) + mm1_0=MEDCouplingUMesh(meshName,3) ; mm1_0.allocateCells() + mm1_0.setCoords(da1) + mm1_0.insertNextCell(NORM_TETRA4,[0,1,2,3]) + mm1_0.insertNextCell(NORM_TETRA4,[4,5,6,7]) + mm1_0.insertNextCell(NORM_PENTA6,[8,9,10,11,12,13]) + mm1_0.insertNextCell(NORM_PENTA6,[14,15,16,17,18,19]) + mm1_0.insertNextCell(NORM_PENTA6,[20,21,22,23,24,25]) + mm1[0]=mm1_0 + mm1.setFamilyFieldArr(0,DataArrayInt([1,2,3,4,5])) + mm1.setRenumFieldArr(0,DataArrayInt([11,12,13,14,15])) + # + mm1_1=MEDCouplingUMesh(meshName,2) ; mm1_1.allocateCells() + mm1_1.setCoords(da1) + mm1_1.insertNextCell(NORM_TRI3,[0,1,2]) + mm1_1.insertNextCell(NORM_TRI3,[3,4,5]) + mm1_1.insertNextCell(NORM_QUAD4,[6,7,8,9]) + mm1_1.insertNextCell(NORM_QUAD4,[10,11,12,13]) + mm1_1.insertNextCell(NORM_QUAD4,[14,15,16,17]) + mm1_1.insertNextCell(NORM_QUAD4,[18,19,20,21]) + mm1[-1]=mm1_1 + mm1.setFamilyFieldArr(-1,DataArrayInt([6,7,8,9,10,11])) + mm1.setRenumFieldArr(-1,DataArrayInt([16,17,18,19,20,21])) + for i in range(1,10): + mm1.setFamilyId("F%d"%i,i) + mm1.setFamilyId("FAMILLE_ZERO",0) + mm1.setFamilyId("H1",100) + mm1.setFamiliesOnGroup("myGRP",["F2","F6"]) + mm1.setFamiliesOnGroup("myGRP1",["F2","F6"]) + mm1.setFamilyFieldArr(1,DataArrayInt([12,13,14,15])) + mm1.setRenumFieldArr(1,DataArrayInt([22,23,24,25])) + ############## + mm2=MEDFileUMesh() + da1=DataArrayDouble([9,10,30,11,12,31,13,14,32,15,16,33,17,18,34],5,3) ; da1.setInfoOnComponents(["aa [m]","bbb [kg]","cccc [MW]"]) + mm2.setCoords(da1) + mm2_0=MEDCouplingUMesh(meshName,3) ; mm2_0.allocateCells() + mm2_0.setCoords(da1) + mm2_0.insertNextCell(NORM_TETRA4,[100,101,102,103]) + mm2_0.insertNextCell(NORM_TETRA4,[104,105,106,107]) + mm2_0.insertNextCell(NORM_TETRA4,[108,109,110,111]) + mm2_0.insertNextCell(NORM_PENTA6,[112,113,114,115,116,117]) + mm2[0]=mm2_0 + mm2.setFamilyFieldArr(0,DataArrayInt([40,41,42,43])) + mm2.setRenumFieldArr(0,DataArrayInt([50,51,52,53])) + # + mm2_1=MEDCouplingUMesh(meshName,2) ; mm2_1.allocateCells() + mm2_1.setCoords(da1) + mm2_1.insertNextCell(NORM_TRI3,[100,101,102]) + mm2_1.insertNextCell(NORM_TRI3,[103,104,105]) + mm2_1.insertNextCell(NORM_TRI3,[106,107,108]) + mm2_1.insertNextCell(NORM_QUAD4,[109,110,111,112]) + mm2_1.insertNextCell(NORM_QUAD4,[113,114,115,116]) + mm2_1.insertNextCell(NORM_QUAD4,[117,118,119,120]) + mm2_1.insertNextCell(NORM_QUAD4,[121,122,123,124]) + mm2_1.insertNextCell(NORM_QUAD4,[125,126,127,128]) + mm2[-1]=mm2_1 + mm2.setFamilyFieldArr(-1,DataArrayInt([200,201,202,203,204,205,206,207])) + mm2.setRenumFieldArr(-1,DataArrayInt([300,301,302,303,304,305,306,307])) + for i in range(1,12): + mm2.setFamilyId("G%d"%i,i+30) + mm2.setFamilyId("H1",100) + mm2.setFamilyId("FAMILLE_ZERO",0) + mm2.setFamiliesOnGroup("myGRP",["G2","G6"]) + mm2.setFamiliesOnGroup("myGRP2",["G4","G7"]) + mm2.setFamilyFieldArr(1,DataArrayInt([112,113,114,115,116])) + mm2.setRenumFieldArr(1,DataArrayInt([122,123,124,125,126])) + # + mm=MEDFileUMesh.Aggregate([mm1,mm2]) + ####### + def CheckMesh(tester,mm): + cooExp=DataArrayDouble([(1,2,10),(3,4,11),(5,6,12),(7,8,13),(9,10,30),(11,12,31),(13,14,32),(15,16,33),(17,18,34)]) ; cooExp.setInfoOnComponents(["aa [m]","bbb [kg]","cccc [MW]"]) + tester.assertTrue(mm.getCoords().isEqual(cooExp,1e-12)) + tester.assertTrue(mm[0].getNodalConnectivity().isEqual(DataArrayInt([14,0,1,2,3,14,4,5,6,7,14,104,105,106,107,14,108,109,110,111,14,112,113,114,115,16,8,9,10,11,12,13,16,14,15,16,17,18,19,16,20,21,22,23,24,25,16,116,117,118,119,120,121]))) + tester.assertTrue(mm[0].getNodalConnectivityIndex().isEqual(DataArrayInt([0,5,10,15,20,25,32,39,46,53]))) + tester.assertTrue(mm[-1].getNodalConnectivity().isEqual(DataArrayInt([3,0,1,2,3,3,4,5,3,104,105,106,3,107,108,109,3,110,111,112,4,6,7,8,9,4,10,11,12,13,4,14,15,16,17,4,18,19,20,21,4,113,114,115,116,4,117,118,119,120,4,121,122,123,124,4,125,126,127,128,4,129,130,131,132]))) + tester.assertTrue(mm[-1].getNodalConnectivityIndex().isEqual(DataArrayInt([0,4,8,12,16,20,25,30,35,40,45,50,55,60,65]))) + tester.assertTrue(mm.getFamilyFieldAtLevel(0).isEqual(DataArrayInt([1,2,40,41,42,3,4,5,43]))) + tester.assertTrue(mm.getNumberFieldAtLevel(0).isEqual(DataArrayInt([11,12,50,51,52,13,14,15,53]))) + tester.assertTrue(mm.getFamilyFieldAtLevel(-1).isEqual(DataArrayInt([6,7,200,201,202,8,9,10,11,203,204,205,206,207]))) + tester.assertTrue(mm.getNumberFieldAtLevel(-1).isEqual(DataArrayInt([16,17,300,301,302,18,19,20,21,303,304,305,306,307]))) + refFamIds=[("FAMILLE_ZERO",0),('F1',1),('F2',2),('F3',3),('F4',4),('F5',5),('F6',6),('F7',7),('F8',8),('F9',9),('G1',31),('G10',40),('G11',41),('G2',32),('G3',33),('G4',34),('G5',35),('G6',36),('G7',37),('G8',38),('G9',39),("H1",100)] + tester.assertEqual(set(mm.getFamiliesNames()),set([elt[0] for elt in refFamIds])) + tester.assertEqual(set([mm.getFamilyId(elt) for elt in mm.getFamiliesNames()]),set([elt[1] for elt in refFamIds])) + tester.assertEqual(mm.getGroupsNames(),('myGRP','myGRP1','myGRP2')) + tester.assertEqual(mm.getAllDistributionOfTypes(),[(NORM_TRI3,5),(NORM_QUAD4,9),(NORM_TETRA4,5),(NORM_PENTA6,4),(NORM_ERROR,9)]) + pass + CheckMesh(self,mm) + ## + fieldName="zeField" + t1=(2.3,3,5) + t2=(5.6,7,12) + infoc=["dd [W]","eee [kA]"] + ## + fmts1=MEDFileFieldMultiTS() + f1ts1=MEDFileField1TS() + f1_1=MEDCouplingFieldDouble(ON_CELLS) ; f1_1.setMesh(mm1[0]) ; f1_1.setName(fieldName) + arr1=DataArrayDouble([(10,110),(11,111),(12,112),(13,113),(14,114)]) + arr1.setInfoOnComponents(infoc) + f1_1.setArray(arr1) ; f1_1.setTime(*t1) ; f1_1.setTimeUnit("ms") + f1_1.checkConsistencyLight() + f1ts1.setFieldNoProfileSBT(f1_1) + # + f1_2=MEDCouplingFieldDouble(ON_CELLS) ; f1_2.setMesh(mm1[-1]) ; f1_2.setName(fieldName) + arr2=DataArrayDouble([(15,115),(16,116),(17,117),(18,118),(19,119),(20,120)]) + arr2.setInfoOnComponents(infoc) + f1_2.setArray(arr2) ; f1_2.setTime(*t1) ; f1_2.setTimeUnit("ms") + f1_2.checkConsistencyLight() + f1ts1.setFieldNoProfileSBT(f1_2) + f1_3=MEDCouplingFieldDouble(ON_NODES) ; f1_3.setMesh(mm1[0]) ; f1_3.setName(fieldName) + arr3=DataArrayDouble([(21,121),(22,122),(23,123),(24,124)]) + arr3.setInfoOnComponents(infoc) + f1_3.setArray(arr3) ; f1_3.setTime(*t1) ; f1_3.setTimeUnit("ms") + f1_3.checkConsistencyLight() + f1ts1.setFieldNoProfileSBT(f1_3) + fmts1.pushBackTimeStep(f1ts1) + # + f1ts2=f1ts1.deepCopy() + f1ts2.setTime(t2[1],t2[2],t2[0]) + f1ts2.getUndergroundDataArray()[:]+=2000 + fmts1.pushBackTimeStep(f1ts2) + ### fmts2 + fmts2=MEDFileFieldMultiTS() + f1ts3=MEDFileField1TS() + f2_1=MEDCouplingFieldDouble(ON_CELLS) ; f2_1.setMesh(mm2[0]) ; f2_1.setName(fieldName) + arr4=DataArrayDouble([(50,150),(51,151),(52,152),(53,153)]) + arr4.setInfoOnComponents(infoc) + f2_1.setArray(arr4) ; f2_1.setTime(*t1) ; f2_1.setTimeUnit("ms") + f2_1.checkConsistencyLight() + f1ts3.setFieldNoProfileSBT(f2_1) + f2_2=MEDCouplingFieldDouble(ON_CELLS) ; f2_2.setMesh(mm2[-1]) ; f2_2.setName(fieldName) + arr5=DataArrayDouble([(54,154),(55,155),(56,156),(57,157),(158,158),(59,159),(60,160),(61,161)]) + arr5.setInfoOnComponents(infoc) + f2_2.setArray(arr5) ; f2_2.setTime(*t1) ; f2_2.setTimeUnit("ms") + f2_2.checkConsistencyLight() + f1ts3.setFieldNoProfileSBT(f2_2) + f2_3=MEDCouplingFieldDouble(ON_NODES) ; f2_3.setMesh(mm2[0]) ; f2_3.setName(fieldName) + arr6=DataArrayDouble([(62,162),(63,163),(64,164),(65,165),(66,166)]) + arr6.setInfoOnComponents(infoc) + f2_3.setArray(arr6) ; f2_3.setTime(*t1) ; f2_3.setTimeUnit("ms") + f2_3.checkConsistencyLight() + f1ts3.setFieldNoProfileSBT(f2_3) + fmts2.pushBackTimeStep(f1ts3) + # + f1ts4=f1ts3.deepCopy() + f1ts4.setTime(t2[1],t2[2],t2[0]) + f1ts4.getUndergroundDataArray()[:]+=2000 + fmts2.pushBackTimeStep(f1ts4) + # + mfd1=MEDFileData() + mfd1.setMeshes(MEDFileMeshes()) + mfd1.getMeshes().pushMesh(mm1) + mfd1.setFields(MEDFileFields()) + mfd1.getFields().pushField(fmts1) + # + mfd2=MEDFileData() + mfd2.setMeshes(MEDFileMeshes()) + mfd2.getMeshes().pushMesh(mm2) + mfd2.setFields(MEDFileFields()) + mfd2.getFields().pushField(fmts2) + # ze Call ! + mfd=MEDFileData.Aggregate([mfd1,mfd2]) + def CheckMFD(tester,mfd): + tester.assertEqual(len(mfd.getMeshes()),1) + tester.assertEqual(len(mfd.getFields()),1) + CheckMesh(self,mfd.getMeshes()[0]) + tester.assertEqual(len(mfd.getFields()[0]),2) + zeF1=mfd.getFields()[0][0] + zeF1_1=zeF1.getFieldOnMeshAtLevel(ON_CELLS,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_1,f2_1]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + tester.assertTrue(ref.isEqual(zeF1_1,1e-12,1e-12)) + zeF1_2=zeF1.getFieldOnMeshAtLevel(ON_CELLS,-1,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_2,f2_2]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + tester.assertTrue(ref.isEqual(zeF1_2,1e-12,1e-12)) + zeF1_3=zeF1.getFieldOnMeshAtLevel(ON_NODES,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_3,f2_3]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + tester.assertTrue(ref.isEqual(zeF1_3,1e-12,1e-12)) + # + zeF2=mfd.getFields()[0][1] + zeF2_1=zeF2.getFieldOnMeshAtLevel(ON_CELLS,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_1,f2_1]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + ref.setTime(*t2) ; ref.getArray()[:]+=2000 + tester.assertTrue(ref.isEqual(zeF2_1,1e-12,1e-12)) + zeF2_2=zeF2.getFieldOnMeshAtLevel(ON_CELLS,-1,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_2,f2_2]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + ref.setTime(*t2) ; ref.getArray()[:]+=2000 + tester.assertTrue(ref.isEqual(zeF2_2,1e-12,1e-12)) + zeF2_3=zeF2.getFieldOnMeshAtLevel(ON_NODES,0,mfd.getMeshes()[0]) + ref=MEDCouplingFieldDouble.MergeFields([f1_3,f2_3]) + o2n=ref.getMesh().deepCopy().sortCellsInMEDFileFrmt() + ref.renumberCells(o2n) + ref.setTime(*t2) ; ref.getArray()[:]+=2000 + tester.assertTrue(ref.isEqual(zeF2_3,1e-12,1e-12)) + CheckMFD(self,mfd) + mfd1.write(fname1,2) ; mfd2.write(fname2,2) + mfd=MEDFileData.Aggregate([MEDFileData(fname1),MEDFileData(fname2)]) + CheckMFD(self,mfd) + pass + + def testExtrudedMesh1(self): + fname="Pyfile107.med" + arrX=DataArrayDouble([0,1,2,3]) ; arrY=DataArrayDouble([0,1,2,3,4]) ; arrZ=DataArrayDouble([0,1,2,3,4,5]) + mesh3D=MEDCouplingCMesh() ; mesh3D.setCoords(arrX,arrY,arrZ) ; mesh3D.setName("mesh") + ex=MEDCouplingMappedExtrudedMesh(mesh3D) + mm=MEDFileUMesh(ex) + mm.write(fname,2) + ex2=mm.convertToExtrudedMesh() + mm2=MEDFileMesh.New(fname) + ex3=mm2.convertToExtrudedMesh() + self.assertTrue(ex.isEqual(ex2,1e-12)) + self.assertTrue(ex.isEqual(ex3,1e-12)) + pass + + @unittest.skipUnless(LooseVersion(MEDFileVersionStr())>=LooseVersion('3.2.1'),"This test requires at least MEDFile version 3.2.1") + def testWriteInto30(self): + fname="Pyfile108.med" + fname2="Pyfile109.med" + m=MEDCouplingUMesh("mesh",1) ; m.setCoords(DataArrayDouble([0,0,1,1],2,2)) ; m.allocateCells() ; m.insertNextCell(NORM_SEG2,[1,0]) + mm=MEDFileUMesh() ; mm[0]=m + mm.setFamilyId("FAMILLE_ZERO",0) + # + mm.write30(fname,2) + assert(LooseVersion(MEDFileVersionOfFileStr(fname)).version[:2]==[3,0]) # checks that just written MED file has a version == 3.0.x + mm2=MEDFileUMesh(fname) + self.assertTrue(mm.isEqual(mm2,1e-12)) + # + mm.write(fname2,2) + assert(LooseVersion(MEDFileVersionOfFileStr(fname2)).version[:2]==list(MEDFileVersion()[:2])) # checks that MED file version of written mesh is thoose of the current MED file lib + pass pass -unittest.main() +if __name__ == "__main__": + unittest.main()