X-Git-Url: http://git.salome-platform.org/gitweb/?a=blobdiff_plain;f=src%2FMEDLoader%2FMEDFileMesh.hxx;h=2bb997d34aa6bfc77919f64c47907d99e9165580;hb=82884d74d2c60f07617849cb6c01511a475f8b2c;hp=a25401aea92ea82c52c5967d07010ca4991981bd;hpb=47da75a11690a8e0c5253b8263c244437064e8b5;p=tools%2Fmedcoupling.git

diff --git a/src/MEDLoader/MEDFileMesh.hxx b/src/MEDLoader/MEDFileMesh.hxx
index a25401aea..2bb997d34 100644
--- a/src/MEDLoader/MEDFileMesh.hxx
+++ b/src/MEDLoader/MEDFileMesh.hxx
@@ -1,4 +1,4 @@
-// Copyright (C) 2007-2014  CEA/DEN, EDF R&D
+// Copyright (C) 2007-2015  CEA/DEN, EDF R&D
 //
 // This library is free software; you can redistribute it and/or
 // modify it under the terms of the GNU Lesser General Public
@@ -24,7 +24,9 @@
 #include "MEDLoaderDefines.hxx"
 #include "MEDFileMeshLL.hxx"
 #include "MEDFileUtilities.hxx"
+#include "MEDCouplingPartDefinition.hxx"
 #include "MEDFileMeshReadSelector.hxx"
+#include "MEDFileJoint.hxx"
 
 #include <map>
 #include <list>
@@ -38,7 +40,7 @@ namespace ParaMEDMEM
   {
   public:
     MEDLOADER_EXPORT static MEDFileMesh *New(const std::string& fileName, MEDFileMeshReadSelector *mrs=0);
-    MEDLOADER_EXPORT static MEDFileMesh *New(const std::string& fileName, const std::string& mName, int dt=-1, int it=-1, MEDFileMeshReadSelector *mrs=0);
+    MEDLOADER_EXPORT static MEDFileMesh *New(const std::string& fileName, const std::string& mName, int dt=-1, int it=-1, MEDFileMeshReadSelector *mrs=0, MEDFileJoints* joints=0);
     MEDLOADER_EXPORT std::size_t getHeapMemorySizeWithoutChildren() const;
     MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildrenWithNull() const;
     MEDLOADER_EXPORT virtual MEDFileMesh *createNewEmpty() const = 0;
@@ -66,6 +68,7 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT std::string getTimeUnit() const { return _dt_unit; }
     MEDLOADER_EXPORT std::vector<INTERP_KERNEL::NormalizedCellType> getAllGeoTypes() const;
     MEDLOADER_EXPORT virtual int getNumberOfNodes() const = 0;
+    MEDLOADER_EXPORT virtual int getNumberOfCellsAtLevel(int meshDimRelToMaxExt) const = 0;
     MEDLOADER_EXPORT virtual bool hasImplicitPart() const = 0;
     MEDLOADER_EXPORT virtual int buildImplicitPartIfAny(INTERP_KERNEL::NormalizedCellType gt) const = 0;
     MEDLOADER_EXPORT virtual void releaseImplicitPartIfAny() const = 0;
@@ -117,6 +120,9 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT void removeFamily(const std::string& name);
     MEDLOADER_EXPORT std::vector<std::string> removeOrphanGroups();
     MEDLOADER_EXPORT std::vector<std::string> removeOrphanFamilies();
+    MEDLOADER_EXPORT void removeFamiliesReferedByNoGroups();
+    MEDLOADER_EXPORT void rearrangeFamilies();
+    MEDLOADER_EXPORT void checkOrphanFamilyZero() const;
     MEDLOADER_EXPORT void changeGroupName(const std::string& oldName, const std::string& newName);
     MEDLOADER_EXPORT void changeFamilyName(const std::string& oldName, const std::string& newName);
     MEDLOADER_EXPORT void changeFamilyId(int oldId, int newId);
@@ -146,7 +152,11 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT virtual void setFamilyFieldArr(int meshDimRelToMaxExt, DataArrayInt *famArr) = 0;
     MEDLOADER_EXPORT virtual void setRenumFieldArr(int meshDimRelToMaxExt, DataArrayInt *renumArr) = 0;
     MEDLOADER_EXPORT virtual void setNameFieldAtLevel(int meshDimRelToMaxExt, DataArrayAsciiChar *nameArr) = 0;
+    MEDLOADER_EXPORT virtual void addNodeGroup(const DataArrayInt *ids) = 0;
+    MEDLOADER_EXPORT virtual void addGroup(int meshDimRelToMaxExt, const DataArrayInt *ids) = 0;
     MEDLOADER_EXPORT virtual const DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) const = 0;
+    MEDLOADER_EXPORT virtual DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) = 0;
+    MEDLOADER_EXPORT DataArrayInt *getOrCreateAndGetFamilyFieldAtLevel(int meshDimRelToMaxExt);
     MEDLOADER_EXPORT virtual const DataArrayInt *getNumberFieldAtLevel(int meshDimRelToMaxExt) const = 0;
     MEDLOADER_EXPORT virtual const DataArrayInt *getRevNumberFieldAtLevel(int meshDimRelToMaxExt) const = 0;
     MEDLOADER_EXPORT virtual const DataArrayAsciiChar *getNameFieldAtLevel(int meshDimRelToMaxExt) const = 0;
@@ -160,6 +170,9 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT virtual DataArrayInt *getNodeFamiliesArr(const std::vector<std::string>& fams, bool renum=false) const;
     // tools
     MEDLOADER_EXPORT virtual bool unPolyze(std::vector<int>& oldCode, std::vector<int>& newCode, DataArrayInt *& o2nRenumCell) = 0;
+    MEDLOADER_EXPORT int                  getNumberOfJoints();
+    MEDLOADER_EXPORT MEDFileJoints *getJoints() const;
+    MEDLOADER_EXPORT void                 setJoints( MEDFileJoints* joints );
   protected:
     MEDFileMesh();
     //! protected because no way in MED file API to specify this name
@@ -171,11 +184,15 @@ namespace ParaMEDMEM
     void getFamilyRepr(std::ostream& oss) const;
     virtual void appendFamilyEntries(const DataArrayInt *famIds, const std::vector< std::vector<int> >& fidsOfGrps, const std::vector<std::string>& grpNames);
     virtual void changeFamilyIdArr(int oldId, int newId) = 0;
+    virtual std::list< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > getAllNonNullFamilyIds() const = 0;
+    void addGroupUnderground(bool isNodeGroup, const DataArrayInt *ids, DataArrayInt *famArr);
     static void TranslateFamilyIds(int offset, DataArrayInt *famArr, std::vector< std::vector<int> >& famIdsPerGrp);
     static void ChangeAllGroupsContainingFamily(std::map<std::string, std::vector<std::string> >& groups, const std::string& familyNameToChange, const std::vector<std::string>& newFamiliesNames);
     static std::string FindOrCreateAndGiveFamilyWithId(std::map<std::string,int>& families, int id, bool& created);
     static std::string CreateNameNotIn(const std::string& nameTry, const std::vector<std::string>& namesToAvoid);
     static int PutInThirdComponentOfCodeOffset(std::vector<int>& code, int strt);
+    void writeJoints(med_idt fid) const;
+    void loadJointsFromFile(med_idt fid, MEDFileJoints* toUseInstedOfReading=0);
   protected:
     int _order;
     int _iteration;
@@ -186,6 +203,7 @@ namespace ParaMEDMEM
     mutable std::string _univ_name;
     bool _univ_wr_status;
     std::string _desc_name;
+    MEDCouplingAutoRefCountObjectPtr<MEDFileJoints> _joints;
   protected:
     std::map<std::string, std::vector<std::string> > _groups;
     std::map<std::string,int> _families;
@@ -210,7 +228,6 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT bool isEqual(const MEDFileMesh *other, double eps, std::string& what) const;
     MEDLOADER_EXPORT void clearNonDiscrAttributes() const;
     MEDLOADER_EXPORT void setName(const std::string& name);
-    MEDLOADER_EXPORT ~MEDFileUMesh();
     //
     MEDLOADER_EXPORT int getMaxAbsFamilyIdInArrays() const;
     MEDLOADER_EXPORT int getMaxFamilyIdInArrays() const;
@@ -221,10 +238,13 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT std::string advancedRepr() const;
     MEDLOADER_EXPORT int getSizeAtLevel(int meshDimRelToMaxExt) const;
     MEDLOADER_EXPORT const DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) const;
+    MEDLOADER_EXPORT DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt);
     MEDLOADER_EXPORT const DataArrayInt *getNumberFieldAtLevel(int meshDimRelToMaxExt) const;
     MEDLOADER_EXPORT const DataArrayInt *getRevNumberFieldAtLevel(int meshDimRelToMaxExt) const;
     MEDLOADER_EXPORT const DataArrayAsciiChar *getNameFieldAtLevel(int meshDimRelToMaxExt) const;
+    MEDLOADER_EXPORT const PartDefinition *getPartDefAtLevel(int meshDimRelToMaxExt, INTERP_KERNEL::NormalizedCellType gt=INTERP_KERNEL::NORM_ERROR) const;
     MEDLOADER_EXPORT int getNumberOfNodes() const;
+    MEDLOADER_EXPORT int getNumberOfCellsAtLevel(int meshDimRelToMaxExt) const;
     MEDLOADER_EXPORT bool hasImplicitPart() const;
     MEDLOADER_EXPORT int buildImplicitPartIfAny(INTERP_KERNEL::NormalizedCellType gt) const;
     MEDLOADER_EXPORT void releaseImplicitPartIfAny() const;
@@ -262,6 +282,7 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT MEDCoupling1GTUMesh *getDirectUndergroundSingleGeoTypeMesh(INTERP_KERNEL::NormalizedCellType gt) const;
     MEDLOADER_EXPORT DataArrayInt *extractFamilyFieldOnGeoType(INTERP_KERNEL::NormalizedCellType gt) const;
     MEDLOADER_EXPORT DataArrayInt *extractNumberFieldOnGeoType(INTERP_KERNEL::NormalizedCellType gt) const;
+    MEDLOADER_EXPORT int getRelativeLevOnGeoType(INTERP_KERNEL::NormalizedCellType gt) const;
     //
     MEDLOADER_EXPORT void setFamilyNameAttachedOnId(int id, const std::string& newFamName);
     MEDLOADER_EXPORT void setCoords(DataArrayDouble *coords);
@@ -282,7 +303,16 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT void duplicateNodesOnM1Group(const std::string& grpNameM1, DataArrayInt *&nodesDuplicated, DataArrayInt *&cellsModified, DataArrayInt *&cellsNotModified);
     MEDLOADER_EXPORT bool unPolyze(std::vector<int>& oldCode, std::vector<int>& newCode, DataArrayInt *& o2nRenumCell);
     MEDLOADER_EXPORT DataArrayInt *zipCoords();
+    MEDLOADER_EXPORT MEDFileUMesh *buildExtrudedMesh(const MEDCouplingUMesh *m1D, int policy) const;
+    MEDLOADER_EXPORT MEDFileUMesh *linearToQuadratic(int conversionType=0, double eps=1e-12) const;
+    MEDLOADER_EXPORT MEDFileUMesh *quadraticToLinear(double eps=1e-12) const;
+    // serialization
+    MEDLOADER_EXPORT void serialize(std::vector<double>& tinyDouble, std::vector<int>& tinyInt, std::vector<std::string>& tinyStr,
+                                    std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> >& bigArraysI, MEDCouplingAutoRefCountObjectPtr<DataArrayDouble>& bigArrayD);
+    MEDLOADER_EXPORT void unserialize(std::vector<double>& tinyDouble, std::vector<int>& tinyInt, std::vector<std::string>& tinyStr,
+                                      std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> >& bigArraysI, MEDCouplingAutoRefCountObjectPtr<DataArrayDouble>& bigArrayD);
   private:
+    MEDLOADER_EXPORT ~MEDFileUMesh();
     void writeLL(med_idt fid) const;
     MEDFileUMesh();
     MEDFileUMesh(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
@@ -297,7 +327,6 @@ namespace ParaMEDMEM
     void synchronizeTinyInfoOnLeaves() const;
     void changeFamilyIdArr(int oldId, int newId);
     std::list< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > getAllNonNullFamilyIds() const;
-    void addGroupUnderground(bool isNodeGroup, const DataArrayInt *ids, DataArrayInt *famArr);
     MEDCouplingAutoRefCountObjectPtr<MEDFileUMeshSplitL1>& checkAndGiveEntryInSplitL1(int meshDimRelToMax, MEDCouplingPointSet *m);
   private:
     std::vector< MEDCouplingAutoRefCountObjectPtr<MEDFileUMeshSplitL1> > _ms;
@@ -306,6 +335,7 @@ namespace ParaMEDMEM
     MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _num_coords;
     MEDCouplingAutoRefCountObjectPtr<DataArrayAsciiChar> _name_coords;
     mutable MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _rev_num_coords;
+    MEDCouplingAutoRefCountObjectPtr<PartDefinition> _part_coords;
   };
 
   class MEDFileStructuredMesh : public MEDFileMesh
@@ -321,9 +351,12 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT void clearNonDiscrAttributes() const;
     MEDLOADER_EXPORT DataArrayInt *getFamiliesArr(int meshDimRelToMaxExt, const std::vector<std::string>& fams, bool renum=false) const;
     MEDLOADER_EXPORT const DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) const;
+    MEDLOADER_EXPORT DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt);
     MEDLOADER_EXPORT void setFamilyFieldArr(int meshDimRelToMaxExt, DataArrayInt *famArr);
     MEDLOADER_EXPORT void setRenumFieldArr(int meshDimRelToMaxExt, DataArrayInt *renumArr);
     MEDLOADER_EXPORT void setNameFieldAtLevel(int meshDimRelToMaxExt, DataArrayAsciiChar *nameArr);
+    MEDLOADER_EXPORT void addNodeGroup(const DataArrayInt *ids);
+    MEDLOADER_EXPORT void addGroup(int meshDimRelToMaxExt, const DataArrayInt *ids);
     MEDLOADER_EXPORT const DataArrayInt *getNumberFieldAtLevel(int meshDimRelToMaxExt) const;
     MEDLOADER_EXPORT const DataArrayInt *getRevNumberFieldAtLevel(int meshDimRelToMaxExt) const;
     MEDLOADER_EXPORT const DataArrayAsciiChar *getNameFieldAtLevel(int meshDimRelToMaxExt) const;
@@ -335,6 +368,7 @@ namespace ParaMEDMEM
     MEDCouplingMesh *getGenMeshAtLevel(int meshDimRelToMax, bool renum=false) const;
     MEDLOADER_EXPORT int getSizeAtLevel(int meshDimRelToMaxExt) const;
     MEDLOADER_EXPORT int getNumberOfNodes() const;
+    MEDLOADER_EXPORT int getNumberOfCellsAtLevel(int meshDimRelToMaxExt) const;
     MEDLOADER_EXPORT bool hasImplicitPart() const;
     MEDLOADER_EXPORT int buildImplicitPartIfAny(INTERP_KERNEL::NormalizedCellType gt) const;
     MEDLOADER_EXPORT void releaseImplicitPartIfAny() const;
@@ -345,7 +379,9 @@ namespace ParaMEDMEM
     // tools
     MEDLOADER_EXPORT bool unPolyze(std::vector<int>& oldCode, std::vector<int>& newCode, DataArrayInt *& o2nRenumCell);
   protected:
+    ~MEDFileStructuredMesh() { }
     void changeFamilyIdArr(int oldId, int newId);
+    std::list< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > getAllNonNullFamilyIds() const;
     void deepCpyAttributes();
     void loadStrMeshFromFile(MEDFileStrMeshL2 *strm, med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
     void writeStructuredLL(med_idt fid, const std::string& maa) const;
@@ -391,6 +427,7 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT const MEDCouplingCMesh *getMesh() const;
     MEDLOADER_EXPORT void setMesh(MEDCouplingCMesh *m);
   private:
+    ~MEDFileCMesh() { }
     const MEDCouplingStructuredMesh *getStructuredMesh() const;
     void writeLL(med_idt fid) const;
     MEDFileCMesh();
@@ -421,6 +458,7 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT const MEDCouplingCurveLinearMesh *getMesh() const;
     MEDLOADER_EXPORT void setMesh(MEDCouplingCurveLinearMesh *m);
   private:
+    ~MEDFileCurveLinearMesh() { }
     MEDFileCurveLinearMesh();
     MEDFileCurveLinearMesh(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
     const MEDCouplingStructuredMesh *getStructuredMesh() const;
@@ -447,7 +485,10 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT void write(med_idt fid) const;
     MEDLOADER_EXPORT void write(const std::string& fileName, int mode) const;
     MEDLOADER_EXPORT void setOneTimeStep(MEDFileMesh *mesh1TimeStep);
+    MEDLOADER_EXPORT MEDFileJoints *getJoints() const;
+    MEDLOADER_EXPORT void                 setJoints( MEDFileJoints* joints );
   private:
+    ~MEDFileMeshMultiTS() { }
     void loadFromFile(const std::string& fileName, const std::string& mName);
     MEDFileMeshMultiTS();
     MEDFileMeshMultiTS(const std::string& fileName);
@@ -482,6 +523,7 @@ namespace ParaMEDMEM
     MEDLOADER_EXPORT void setMeshAtPos(int i, MEDFileMesh *mesh);
     MEDLOADER_EXPORT void destroyMeshAtPos(int i);
   private:
+    ~MEDFileMeshes() { }
     void checkCoherency() const;
     void loadFromFile(const std::string& fileName);
     MEDFileMeshes();