X-Git-Url: http://git.salome-platform.org/gitweb/?a=blobdiff_plain;f=src%2FMEDCoupling%2FMEDCouplingUMesh.hxx;h=8a6dc0b4936d48f710bc29b6d7e79429d975027e;hb=06a1e47785f4fc717910e0ba2fd562a238e5e932;hp=202f0f33481847d61247a0faa029929bf32c20bc;hpb=da05ea45ba84b06b0686a7e365152236e8658a20;p=tools%2Fmedcoupling.git diff --git a/src/MEDCoupling/MEDCouplingUMesh.hxx b/src/MEDCoupling/MEDCouplingUMesh.hxx index 202f0f334..8a6dc0b49 100644 --- a/src/MEDCoupling/MEDCouplingUMesh.hxx +++ b/src/MEDCoupling/MEDCouplingUMesh.hxx @@ -1,4 +1,4 @@ -// Copyright (C) 2007-2014 CEA/DEN, EDF R&D +// Copyright (C) 2007-2016 CEA/DEN, EDF R&D // // This library is free software; you can redistribute it and/or // modify it under the terms of the GNU Lesser General Public @@ -29,21 +29,24 @@ #include -namespace ParaMEDMEM +namespace MEDCoupling { class MEDCouplingUMeshCellByTypeEntry; class MEDCouplingUMeshCellIterator; class MEDCoupling1SGTUMesh; class MEDCoupling1GTUMesh; + class MEDCouplingSkyLineArray; class MEDCouplingUMesh : public MEDCouplingPointSet { public: MEDCOUPLING_EXPORT static MEDCouplingUMesh *New(); MEDCOUPLING_EXPORT static MEDCouplingUMesh *New(const std::string& meshName, int meshDim); - MEDCOUPLING_EXPORT MEDCouplingMesh *deepCpy() const; + // Copy methods + MEDCOUPLING_EXPORT MEDCouplingUMesh *deepCopy() const; MEDCOUPLING_EXPORT MEDCouplingUMesh *clone(bool recDeepCpy) const; - MEDCOUPLING_EXPORT MEDCouplingPointSet *deepCpyConnectivityOnly() const; + MEDCOUPLING_EXPORT MEDCouplingUMesh *deepCopyConnectivityOnly() const; + MEDCOUPLING_EXPORT void shallowCopyConnectivityFrom(const MEDCouplingPointSet *other); MEDCOUPLING_EXPORT void updateTime() const; MEDCOUPLING_EXPORT std::size_t getHeapMemorySizeWithoutChildren() const; @@ -52,9 +55,8 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT bool isEqualIfNotWhy(const MEDCouplingMesh *other, double prec, std::string& reason) const; MEDCOUPLING_EXPORT bool isEqualWithoutConsideringStr(const MEDCouplingMesh *other, double prec) const; MEDCOUPLING_EXPORT void checkFastEquivalWith(const MEDCouplingMesh *other, double prec) const; - MEDCOUPLING_EXPORT void checkCoherency() const; - MEDCOUPLING_EXPORT void checkCoherency1(double eps=1e-12) const; - MEDCOUPLING_EXPORT void checkCoherency2(double eps=1e-12) const; + MEDCOUPLING_EXPORT void checkConsistencyLight() const; + MEDCOUPLING_EXPORT void checkConsistency(double eps=1e-12) const; MEDCOUPLING_EXPORT void setMeshDimension(int meshDim); MEDCOUPLING_EXPORT void allocateCells(int nbOfCells=0); MEDCOUPLING_EXPORT void insertNextCell(INTERP_KERNEL::NormalizedCellType type, int size, const int *nodalConnOfCell); @@ -69,19 +71,19 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT const DataArrayInt *getNodalConnectivityIndex() const { return _nodal_connec_index; } MEDCOUPLING_EXPORT DataArrayInt *getNodalConnectivity() { return _nodal_connec; } MEDCOUPLING_EXPORT DataArrayInt *getNodalConnectivityIndex() { return _nodal_connec_index; } - MEDCOUPLING_EXPORT INTERP_KERNEL::NormalizedCellType getTypeOfCell(int cellId) const; + MEDCOUPLING_EXPORT INTERP_KERNEL::NormalizedCellType getTypeOfCell(std::size_t cellId) const; MEDCOUPLING_EXPORT DataArrayInt *giveCellsWithType(INTERP_KERNEL::NormalizedCellType type) const; - MEDCOUPLING_EXPORT int getNumberOfCellsWithType(INTERP_KERNEL::NormalizedCellType type) const; - MEDCOUPLING_EXPORT void getNodeIdsOfCell(int cellId, std::vector& conn) const; + MEDCOUPLING_EXPORT std::size_t getNumberOfCellsWithType(INTERP_KERNEL::NormalizedCellType type) const; + MEDCOUPLING_EXPORT void getNodeIdsOfCell(std::size_t cellId, std::vector& conn) const; MEDCOUPLING_EXPORT std::string simpleRepr() const; MEDCOUPLING_EXPORT std::string advancedRepr() const; MEDCOUPLING_EXPORT std::string cppRepr() const; MEDCOUPLING_EXPORT std::string reprConnectivityOfThis() const; MEDCOUPLING_EXPORT MEDCouplingUMesh *buildSetInstanceFromThis(int spaceDim) const; MEDCOUPLING_EXPORT int getNumberOfNodesInCell(int cellId) const; - MEDCOUPLING_EXPORT int getNumberOfCells() const; + MEDCOUPLING_EXPORT std::size_t getNumberOfCells() const; MEDCOUPLING_EXPORT int getMeshDimension() const; - MEDCOUPLING_EXPORT int getMeshLength() const; + MEDCOUPLING_EXPORT int getNodalConnectivityArrayLen() const; MEDCOUPLING_EXPORT void computeTypes(); //! size of returned tinyInfo must be always the same. MEDCOUPLING_EXPORT void getTinySerializationInformation(std::vector& tinyInfoD, std::vector& tinyInfo, std::vector& littleStrings) const; @@ -95,11 +97,11 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT void reprQuickOverview(std::ostream& stream) const; //tools MEDCOUPLING_EXPORT static int AreCellsEqual(const int *conn, const int *connI, int cell1, int cell2, int compType); - MEDCOUPLING_EXPORT static int AreCellsEqual0(const int *conn, const int *connI, int cell1, int cell2); - MEDCOUPLING_EXPORT static int AreCellsEqual1(const int *conn, const int *connI, int cell1, int cell2); - MEDCOUPLING_EXPORT static int AreCellsEqual2(const int *conn, const int *connI, int cell1, int cell2); - MEDCOUPLING_EXPORT static int AreCellsEqual3(const int *conn, const int *connI, int cell1, int cell2); - MEDCOUPLING_EXPORT static int AreCellsEqual7(const int *conn, const int *connI, int cell1, int cell2); + MEDCOUPLING_EXPORT static int AreCellsEqualPolicy0(const int *conn, const int *connI, int cell1, int cell2); + MEDCOUPLING_EXPORT static int AreCellsEqualPolicy1(const int *conn, const int *connI, int cell1, int cell2); + MEDCOUPLING_EXPORT static int AreCellsEqualPolicy2(const int *conn, const int *connI, int cell1, int cell2); + MEDCOUPLING_EXPORT static int AreCellsEqualPolicy2NoType(const int *conn, const int *connI, int cell1, int cell2); + MEDCOUPLING_EXPORT static int AreCellsEqualPolicy7(const int *conn, const int *connI, int cell1, int cell2); MEDCOUPLING_EXPORT void convertToPolyTypes(const int *cellIdsToConvertBg, const int *cellIdsToConvertEnd); MEDCOUPLING_EXPORT void convertAllToPoly(); MEDCOUPLING_EXPORT void convertExtrudedPolyhedra(); @@ -116,24 +118,28 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT DataArrayInt *zipCoordsTraducer(); MEDCOUPLING_EXPORT void findCommonCells(int compType, int startCellId, DataArrayInt *& commonCellsArr, DataArrayInt *& commonCellsIArr) const; MEDCOUPLING_EXPORT bool areCellsIncludedIn(const MEDCouplingUMesh *other, int compType, DataArrayInt *& arr) const; - MEDCOUPLING_EXPORT bool areCellsIncludedIn2(const MEDCouplingUMesh *other, DataArrayInt *& arr) const; + MEDCOUPLING_EXPORT bool areCellsIncludedInPolicy7(const MEDCouplingUMesh *other, DataArrayInt *& arr) const; MEDCOUPLING_EXPORT void getReverseNodalConnectivity(DataArrayInt *revNodal, DataArrayInt *revNodalIndx) const; + MEDCOUPLING_EXPORT MCAuto explodeIntoEdges(MCAuto& desc, MCAuto& descIndex, MCAuto& revDesc, MCAuto& revDescIndx) const; MEDCOUPLING_EXPORT MEDCouplingUMesh *explode3DMeshTo1D(DataArrayInt *desc, DataArrayInt *descIndx, DataArrayInt *revDesc, DataArrayInt *revDescIndx) const; MEDCOUPLING_EXPORT MEDCouplingUMesh *buildDescendingConnectivity(DataArrayInt *desc, DataArrayInt *descIndx, DataArrayInt *revDesc, DataArrayInt *revDescIndx) const; MEDCOUPLING_EXPORT MEDCouplingUMesh *buildDescendingConnectivity2(DataArrayInt *desc, DataArrayInt *descIndx, DataArrayInt *revDesc, DataArrayInt *revDescIndx) const; + MEDCOUPLING_EXPORT MEDCouplingUMesh *explodeMeshIntoMicroEdges(DataArrayInt *desc, DataArrayInt *descIndx, DataArrayInt *revDesc, DataArrayInt *revDescIndx) const; MEDCOUPLING_EXPORT void computeNeighborsOfCells(DataArrayInt *&neighbors, DataArrayInt *&neighborsIdx) const; + MEDCOUPLING_EXPORT void computeCellNeighborhoodFromNodesOne(const DataArrayInt *nodeNeigh, const DataArrayInt *nodeNeighI, MCAuto& cellNeigh, MCAuto& cellNeighIndex) const; MEDCOUPLING_EXPORT static void ComputeNeighborsOfCellsAdv(const DataArrayInt *desc, const DataArrayInt *descI, const DataArrayInt *revDesc, const DataArrayInt *revDescI, DataArrayInt *&neighbors, DataArrayInt *&neighborsIdx); MEDCOUPLING_EXPORT void computeNeighborsOfNodes(DataArrayInt *&neighbors, DataArrayInt *&neighborsIdx) const; - MEDCOUPLING_EXPORT MEDCouplingPointSet *mergeMyselfWithOnSameCoords(const MEDCouplingPointSet *other) const; - MEDCOUPLING_EXPORT MEDCouplingPointSet *buildPartOfMySelf(const int *begin, const int *end, bool keepCoords=true) const; - MEDCOUPLING_EXPORT MEDCouplingPointSet *buildPartOfMySelf2(int start, int end, int step, bool keepCoords=true) const; + MEDCOUPLING_EXPORT void computeEnlargedNeighborsOfNodes(MCAuto &neighbors, MCAuto& neighborsIdx) const; + MEDCOUPLING_EXPORT MEDCouplingUMesh *mergeMyselfWithOnSameCoords(const MEDCouplingPointSet *other) const; + MEDCOUPLING_EXPORT MEDCouplingUMesh *buildPartOfMySelf(const int *begin, const int *end, bool keepCoords=true) const; + MEDCOUPLING_EXPORT MEDCouplingUMesh *buildPartOfMySelfSlice(int start, int end, int step, bool keepCoords=true) const; MEDCOUPLING_EXPORT void setPartOfMySelf(const int *cellIdsBg, const int *cellIdsEnd, const MEDCouplingUMesh& otherOnSameCoordsThanThis); - MEDCOUPLING_EXPORT void setPartOfMySelf2(int start, int end, int step, const MEDCouplingUMesh& otherOnSameCoordsThanThis); - MEDCOUPLING_EXPORT MEDCouplingPointSet *buildFacePartOfMySelfNode(const int *begin, const int *end, bool fullyIn) const; + MEDCOUPLING_EXPORT void setPartOfMySelfSlice(int start, int end, int step, const MEDCouplingUMesh& otherOnSameCoordsThanThis); + MEDCOUPLING_EXPORT MEDCouplingUMesh *buildFacePartOfMySelfNode(const int *begin, const int *end, bool fullyIn) const; MEDCOUPLING_EXPORT MEDCouplingUMesh *buildUnstructured() const; MEDCOUPLING_EXPORT DataArrayInt *findBoundaryNodes() const; - MEDCOUPLING_EXPORT MEDCouplingPointSet *buildBoundaryMesh(bool keepCoords) const; + MEDCOUPLING_EXPORT MEDCouplingUMesh *buildBoundaryMesh(bool keepCoords) const; MEDCOUPLING_EXPORT DataArrayInt *findCellIdsOnBoundary() const; MEDCOUPLING_EXPORT void findCellIdsLyingOn(const MEDCouplingUMesh& otherDimM1OnSameCoords, DataArrayInt *&cellIdsRk0, DataArrayInt *&cellIdsRk1) const; MEDCOUPLING_EXPORT MEDCouplingUMesh *computeSkin() const; @@ -143,6 +149,7 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT void renumberNodesWithOffsetInConn(int offset); MEDCOUPLING_EXPORT void renumberNodesInConn(const INTERP_KERNEL::HashMap& newNodeNumbersO2N); MEDCOUPLING_EXPORT void renumberNodesInConn(const int *newNodeNumbersO2N); + MEDCOUPLING_EXPORT void renumberNodesInConn(const std::map& newNodeNumbersO2N) override; MEDCOUPLING_EXPORT void shiftNodeNumbersInConn(int delta); MEDCOUPLING_EXPORT void duplicateNodesInConn(const int *nodeIdsToDuplicateBg, const int *nodeIdsToDuplicateEnd, int offset); MEDCOUPLING_EXPORT void renumberCells(const int *old2NewBg, bool check=true); @@ -156,6 +163,7 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT MEDCouplingFieldDouble *buildDirectionVectorField() const; MEDCOUPLING_EXPORT MEDCouplingUMesh *buildSlice3D(const double *origin, const double *vec, double eps, DataArrayInt *&cellIds) const; MEDCOUPLING_EXPORT MEDCouplingUMesh *buildSlice3DSurf(const double *origin, const double *vec, double eps, DataArrayInt *&cellIds) const; + MEDCOUPLING_EXPORT MCAuto clipSingle3DCellByPlane(const double origin[3], const double vec[3], double eps) const; MEDCOUPLING_EXPORT DataArrayInt *getCellIdsCrossingPlane(const double *origin, const double *vec, double eps) const; MEDCOUPLING_EXPORT bool isContiguous1D() const; MEDCOUPLING_EXPORT void project1D(const double *pt, const double *v, double eps, double *res) const; @@ -163,7 +171,8 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT DataArrayDouble *distanceToPoints(const DataArrayDouble *pts, DataArrayInt *& cellIds) const; MEDCOUPLING_EXPORT int getCellContainingPoint(const double *pos, double eps) const; MEDCOUPLING_EXPORT void getCellsContainingPoint(const double *pos, double eps, std::vector& elts) const; - MEDCOUPLING_EXPORT void getCellsContainingPoints(const double *pos, int nbOfPoints, double eps, MEDCouplingAutoRefCountObjectPtr& elts, MEDCouplingAutoRefCountObjectPtr& eltsIndex) const; + MEDCOUPLING_EXPORT void getCellsContainingPoints(const double *pos, int nbOfPoints, double eps, MCAuto& elts, MCAuto& eltsIndex) const override; + MEDCOUPLING_EXPORT void getCellsContainingPointsLinearPartOnlyOnNonDynType(const double *pos, int nbOfPoints, double eps, MCAuto& elts, MCAuto& eltsIndex) const override; MEDCOUPLING_EXPORT void checkButterflyCells(std::vector& cells, double eps=1e-12) const; MEDCOUPLING_EXPORT DataArrayInt *convexEnvelop2D(); MEDCOUPLING_EXPORT DataArrayInt *findAndCorrectBadOriented3DExtrudedCells(); @@ -178,26 +187,29 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT void convertQuadraticCellsToLinear(); MEDCOUPLING_EXPORT DataArrayInt *convertLinearCellsToQuadratic(int conversionType=0); MEDCOUPLING_EXPORT void tessellate2D(double eps); - MEDCOUPLING_EXPORT void tessellate2DCurve(double eps); MEDCOUPLING_EXPORT MEDCoupling1SGTUMesh *tetrahedrize(int policy, DataArrayInt *& n2oCells, int& nbOfAdditionalPoints) const; MEDCOUPLING_EXPORT DataArrayInt *simplexize(int policy); MEDCOUPLING_EXPORT bool areOnlySimplexCells() const; MEDCOUPLING_EXPORT void convertDegeneratedCells(); + MEDCOUPLING_EXPORT DataArrayInt *convertDegeneratedCellsAndRemoveFlatOnes(); MEDCOUPLING_EXPORT void are2DCellsNotCorrectlyOriented(const double *vec, bool polyOnly, std::vector& cells) const; MEDCOUPLING_EXPORT void orientCorrectly2DCells(const double *vec, bool polyOnly); MEDCOUPLING_EXPORT void changeOrientationOfCells(); MEDCOUPLING_EXPORT void arePolyhedronsNotCorrectlyOriented(std::vector& cells) const; MEDCOUPLING_EXPORT void orientCorrectlyPolyhedrons(); + MEDCOUPLING_EXPORT void invertOrientationOfAllCells(); MEDCOUPLING_EXPORT void getFastAveragePlaneOfThis(double *vec, double *pos) const; + MEDCOUPLING_EXPORT void attractSeg3MidPtsAroundNodes(double ratio, const int *nodeIdsBg, const int *nodeIdsEnd); //Mesh quality MEDCOUPLING_EXPORT MEDCouplingFieldDouble *getEdgeRatioField() const; MEDCOUPLING_EXPORT MEDCouplingFieldDouble *getAspectRatioField() const; MEDCOUPLING_EXPORT MEDCouplingFieldDouble *getWarpField() const; MEDCOUPLING_EXPORT MEDCouplingFieldDouble *getSkewField() const; + MEDCOUPLING_EXPORT MEDCouplingFieldDouble *computeDiameterField() const; //utilities for MED File RW MEDCOUPLING_EXPORT std::vector getDistributionOfTypes() const; MEDCOUPLING_EXPORT DataArrayInt *checkTypeConsistencyAndContig(const std::vector& code, const std::vector& idsPerType) const; - MEDCOUPLING_EXPORT void splitProfilePerType(const DataArrayInt *profile, std::vector& code, std::vector& idsInPflPerType, std::vector& idsPerType) const; + MEDCOUPLING_EXPORT void splitProfilePerType(const DataArrayInt *profile, std::vector& code, std::vector& idsInPflPerType, std::vector& idsPerType, bool smartPflKiller=true) const; MEDCOUPLING_EXPORT MEDCouplingUMesh *emulateMEDMEMBDC(const MEDCouplingUMesh *nM1LevMesh, DataArrayInt *desc, DataArrayInt *descIndx, DataArrayInt *&revDesc, DataArrayInt *&revDescIndx, DataArrayInt *& nM1LevMeshIds, DataArrayInt *&meshnM1Old2New) const; MEDCOUPLING_EXPORT DataArrayInt *sortCellsInMEDFileFrmt(); MEDCOUPLING_EXPORT bool checkConsecutiveCellTypes() const; @@ -220,16 +232,19 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT std::vector getQuadraticStatus() const; // MEDCOUPLING_EXPORT MEDCouplingMesh *mergeMyselfWith(const MEDCouplingMesh *other) const; - MEDCOUPLING_EXPORT DataArrayDouble *getBarycenterAndOwner() const; + MEDCOUPLING_EXPORT DataArrayDouble *computeCellCenterOfMass() const; MEDCOUPLING_EXPORT DataArrayDouble *computeIsoBarycenterOfNodesPerCell() const; MEDCOUPLING_EXPORT DataArrayDouble *getPartBarycenterAndOwner(const int *begin, const int *end) const; MEDCOUPLING_EXPORT DataArrayDouble *computePlaneEquationOf3DFaces() const; MEDCOUPLING_EXPORT DataArrayInt *conformize2D(double eps); MEDCOUPLING_EXPORT DataArrayInt *colinearize2D(double eps); + MEDCOUPLING_EXPORT DataArrayInt *colinearizeKeepingConform2D(double eps); + MEDCOUPLING_EXPORT DataArrayInt *conformize3D(double eps); MEDCOUPLING_EXPORT int split2DCells(const DataArrayInt *desc, const DataArrayInt *descI, const DataArrayInt *subNodesInSeg, const DataArrayInt *subNodesInSegI, const DataArrayInt *midOpt=0, const DataArrayInt *midOptI=0); MEDCOUPLING_EXPORT static MEDCouplingUMesh *Build0DMeshFromCoords(DataArrayDouble *da); + MEDCOUPLING_EXPORT static MCAuto Build1DMeshFromCoords(DataArrayDouble *da); MEDCOUPLING_EXPORT static MEDCouplingUMesh *MergeUMeshes(const MEDCouplingUMesh *mesh1, const MEDCouplingUMesh *mesh2); - MEDCOUPLING_EXPORT static MEDCouplingUMesh *MergeUMeshes(std::vector& a); + MEDCOUPLING_EXPORT static MEDCouplingUMesh *MergeUMeshes(const std::vector& a); MEDCOUPLING_EXPORT static MEDCouplingUMesh *MergeUMeshesOnSameCoords(const MEDCouplingUMesh *mesh1, const MEDCouplingUMesh *mesh2); MEDCOUPLING_EXPORT static MEDCouplingUMesh *MergeUMeshesOnSameCoords(const std::vector& meshes); MEDCOUPLING_EXPORT static MEDCouplingUMesh *FuseUMeshesOnSameCoords(const std::vector& meshes, int compType, std::vector& corr); @@ -241,7 +256,8 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT static void CorrectExtrudedStaticCell(int *begin, int *end); MEDCOUPLING_EXPORT static bool IsTetra4WellOriented(const int *begin, const int *end, const double *coords); MEDCOUPLING_EXPORT static bool IsPyra5WellOriented(const int *begin, const int *end, const double *coords); - MEDCOUPLING_EXPORT static void SimplifyPolyhedronCell(double eps, const DataArrayDouble *coords, const int *begin, const int *end, DataArrayInt *res); + MEDCOUPLING_EXPORT static void SimplifyPolyhedronCell(double eps, const DataArrayDouble *coords, int index, DataArrayInt *res, MEDCouplingUMesh *faces, + DataArrayInt *E_Fi, DataArrayInt *E_F, DataArrayInt *F_Ei, DataArrayInt *F_E); MEDCOUPLING_EXPORT static void ComputeVecAndPtOfFace(double eps, const double *coords, const int *begin, const int *end, double *v, double *p); MEDCOUPLING_EXPORT static void TryToCorrectPolyhedronOrientation(int *begin, int *end, const double *coords); MEDCOUPLING_EXPORT static MEDCouplingUMesh *Intersect2DMeshes(const MEDCouplingUMesh *m1, const MEDCouplingUMesh *m2, double eps, DataArrayInt *&cellNb1, DataArrayInt *&cellNb2); @@ -251,18 +267,19 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT static bool RemoveIdsFromIndexedArrays(const int *idsToRemoveBg, const int *idsToRemoveEnd, DataArrayInt *arr, DataArrayInt *arrIndx, int offsetForRemoval=0); MEDCOUPLING_EXPORT static void ExtractFromIndexedArrays(const int *idsOfSelectBg, const int *idsOfSelectEnd, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn, DataArrayInt* &arrOut, DataArrayInt* &arrIndexOut); - MEDCOUPLING_EXPORT static void ExtractFromIndexedArrays2(int idsOfSelectStart, int idsOfSelectStop, int idsOfSelectStep, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn, + MEDCOUPLING_EXPORT static void ExtractFromIndexedArraysSlice(int idsOfSelectStart, int idsOfSelectStop, int idsOfSelectStep, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn, DataArrayInt* &arrOut, DataArrayInt* &arrIndexOut); MEDCOUPLING_EXPORT static void SetPartOfIndexedArrays(const int *idsOfSelectBg, const int *idsOfSelectEnd, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn, const DataArrayInt *srcArr, const DataArrayInt *srcArrIndex, DataArrayInt* &arrOut, DataArrayInt* &arrIndexOut); MEDCOUPLING_EXPORT static void SetPartOfIndexedArraysSameIdx(const int *idsOfSelectBg, const int *idsOfSelectEnd, DataArrayInt *arrInOut, const DataArrayInt *arrIndxIn, const DataArrayInt *srcArr, const DataArrayInt *srcArrIndex); - MEDCOUPLING_EXPORT static void SetPartOfIndexedArrays2(int start, int end, int step, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn, + MEDCOUPLING_EXPORT static void SetPartOfIndexedArraysSlice(int start, int end, int step, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn, const DataArrayInt *srcArr, const DataArrayInt *srcArrIndex, DataArrayInt* &arrOut, DataArrayInt* &arrIndexOut); - MEDCOUPLING_EXPORT static void SetPartOfIndexedArraysSameIdx2(int start, int end, int step, DataArrayInt *arrInOut, const DataArrayInt *arrIndxIn, + MEDCOUPLING_EXPORT static void SetPartOfIndexedArraysSameIdxSlice(int start, int end, int step, DataArrayInt *arrInOut, const DataArrayInt *arrIndxIn, const DataArrayInt *srcArr, const DataArrayInt *srcArrIndex); + MEDCOUPLING_EXPORT static std::vector PartitionBySpreadZone(const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn); MEDCOUPLING_EXPORT static DataArrayInt *ComputeSpreadZoneGradually(const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn); MEDCOUPLING_EXPORT static DataArrayInt *ComputeSpreadZoneGraduallyFromSeed(const int *seedBg, const int *seedEnd, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn, int nbOfDepthPeeling, int& nbOfDepthPeelingPerformed); MEDCOUPLING_EXPORT static void FindCommonCellsAlg(int compType, int startCellId, const DataArrayInt *nodal, const DataArrayInt *nodalI, const DataArrayInt *revNodal, const DataArrayInt *revNodalI, @@ -270,9 +287,11 @@ namespace ParaMEDMEM MEDCOUPLING_EXPORT DataArrayInt *buildUnionOf2DMesh() const; MEDCOUPLING_EXPORT DataArrayInt *buildUnionOf3DMesh() const; MEDCOUPLING_EXPORT DataArrayInt *orderConsecutiveCells1D() const; - private: + MEDCOUPLING_EXPORT MEDCouplingSkyLineArray* generateGraph() const; + private: // all private methods are impl in MEDCouplingUMesh_internal.cxx + MEDCouplingUMesh(); - MEDCouplingUMesh(const MEDCouplingUMesh& other, bool deepCopy); + MEDCouplingUMesh(const MEDCouplingUMesh& other, bool deepCpy); ~MEDCouplingUMesh(); void checkFullyDefined() const; void checkConnectivityFullyDefined() const; @@ -282,6 +301,8 @@ namespace ParaMEDMEM DataArrayInt *simplexizePol1(); DataArrayInt *simplexizePlanarFace5(); DataArrayInt *simplexizePlanarFace6(); + void tessellate2DInternal(double eps); + void tessellate2DCurveInternal(double eps); void subDivide2DMesh(const int *nodeSubdived, const int *nodeIndxSubdived, const int *desc, const int *descIndex); void fillCellIdsToKeepFromNodeIds(const int *begin, const int *end, bool fullyIn, DataArrayInt *&cellIdsKeptArr) const; void split3DCurveWithPlane(const double *origin, const double *vec, double eps, std::vector& cut3DCurve); @@ -291,8 +312,8 @@ namespace ParaMEDMEM DataArrayDouble *fillExtCoordsUsingTranslAndAutoRotation2D(const MEDCouplingUMesh *mesh1D, bool isQuad) const; DataArrayDouble *fillExtCoordsUsingTranslAndAutoRotation3D(const MEDCouplingUMesh *mesh1D, bool isQuad) const; static bool AreCellsEqualInPool(const std::vector& candidates, int compType, const int *conn, const int *connI, DataArrayInt *result) ; - MEDCouplingPointSet *buildPartOfMySelfKeepCoords(const int *begin, const int *end) const; - MEDCouplingPointSet *buildPartOfMySelfKeepCoords2(int start, int end, int step) const; + MEDCouplingUMesh *buildPartOfMySelfKeepCoords(const int *begin, const int *end) const; + MEDCouplingUMesh *buildPartOfMySelfKeepCoordsSlice(int start, int end, int step) const; DataArrayInt *convertLinearCellsToQuadratic1D0(DataArrayInt *&conn, DataArrayInt *&connI, DataArrayDouble *& coords, std::set& types) const; DataArrayInt *convertLinearCellsToQuadratic2DAnd3D0(const MEDCouplingUMesh *m1D, const DataArrayInt *desc, const DataArrayInt *descI, DataArrayInt *&conn, DataArrayInt *&connI, DataArrayDouble *& coords, std::set& types) const; DataArrayInt *convertLinearCellsToQuadratic2D0(DataArrayInt *&conn, DataArrayInt *&connI, DataArrayDouble *& coords, std::set& types) const; @@ -303,9 +324,12 @@ namespace ParaMEDMEM DataArrayInt *buildUnionOf2DMeshQuadratic(const MEDCouplingUMesh *skin, const DataArrayInt *n2o) const; template void getCellsContainingPointsAlg(const double *coords, const double *pos, int nbOfPoints, - double eps, MEDCouplingAutoRefCountObjectPtr& elts, MEDCouplingAutoRefCountObjectPtr& eltsIndex) const; + double eps, MCAuto& elts, MCAuto& eltsIndex, std::function sensibilityTo2DQuadraticLinearCellsFunc) const; + void getCellsContainingPointsZeAlg(const double *pos, int nbOfPoints, double eps, + MCAuto& elts, MCAuto& eltsIndex, + std::function sensibilityTo2DQuadraticLinearCellsFunc) const; /// @cond INTERNAL - static MEDCouplingUMesh *MergeUMeshesLL(std::vector& a); + static MEDCouplingUMesh *MergeUMeshesLL(const std::vector& a); typedef int (*DimM1DescNbrer)(int id, unsigned nb, const INTERP_KERNEL::CellModel& cm, bool compute, const int *conn1, const int *conn2); template MEDCouplingUMesh *buildDescendingConnectivityGen(DataArrayInt *desc, DataArrayInt *descIndx, DataArrayInt *revDesc, DataArrayInt *revDescIndx, DimM1DescNbrer nbrer) const; @@ -330,13 +354,25 @@ namespace ParaMEDMEM const int *desc, const int *descIndx, std::vector< std::pair >& cut3DSurf); void assemblyForSplitFrom3DSurf(const std::vector< std::pair >& cut3DSurf, const int *desc, const int *descIndx, DataArrayInt *nodalRes, DataArrayInt *nodalResIndx, DataArrayInt *cellIds) const; + void buildSubCellsFromCut(const std::vector< std::pair >& cut3DSurf, const int *desc, const int *descIndx, const double *coords, double eps, std::vector >& res) const; void split2DCellsLinear(const DataArrayInt *desc, const DataArrayInt *descI, const DataArrayInt *subNodesInSeg, const DataArrayInt *subNodesInSegI); int split2DCellsQuadratic(const DataArrayInt *desc, const DataArrayInt *descI, const DataArrayInt *subNodesInSeg, const DataArrayInt *subNodesInSegI, const DataArrayInt *mid, const DataArrayInt *midI); - static bool Colinearize2DCell(const double *coords, const int *connBg, const int *connEnd, int offset, DataArrayInt *newConnOfCell, DataArrayDouble *appendedCoords); + static bool Colinearize2DCell(const double *coords, const int *connBg, const int *connEnd, int offset, const std::map& forbiddenPoints, DataArrayInt *newConnOfCell, DataArrayDouble *appendedCoords); + static void ComputeAllTypesInternal(std::set& types, const DataArrayInt *nodalConnec, const DataArrayInt *nodalConnecIndex); + static bool OrderPointsAlongLine(const double * coo, int startNode, int endNode, + const int * c, const int * cI, const int *idsBg, const int *endBg, + std::vector & pointIds, std::vector & hitSegs); + static void ReplaceEdgeInFace(const int * sIdxConn, const int * sIdxConnE, int startNode, int endNode, + const std::vector& insidePoints, std::vector& modifiedFace); + void attractSeg3MidPtsAroundNodesUnderground(double ratio, const int *nodeIdsBg, const int *nodeIdsEnd); + DataArrayInt *internalColinearize2D(double eps, bool stayConform); + template + void renumberNodesInConnT(const MAPCLS& newNodeNumbersO2N); public: MEDCOUPLING_EXPORT static DataArrayInt *ComputeRangesFromTypeDistribution(const std::vector& code); - MEDCOUPLING_EXPORT static const int N_MEDMEM_ORDER=24; + MEDCOUPLING_EXPORT static const int N_MEDMEM_ORDER=25; MEDCOUPLING_EXPORT static const INTERP_KERNEL::NormalizedCellType MEDMEM_ORDER[N_MEDMEM_ORDER]; + MEDCOUPLING_EXPORT static const int MEDCOUPLING2VTKTYPETRADUCER[INTERP_KERNEL::NORM_MAXTYPE+1]; /// @endcond private: int _mesh_dim;