MPI_Datatype ParaTraits<Int64>::MPIDataType = MPI_LONG;
- /*! \anchor CommInterface-det
- \class CommInterface
-
- The class \a CommInterface is the gateway to the MPI library.
- It is a wrapper around all MPI calls, thus trying to abstract the rest of the code from using the direct MPI API
- (but this is not strictly respected overall in practice ...). It is used in all
- the \ref parallel "DEC related classes".
-
- It is typically instantiated after the MPI_Init() call in a program and is afterwards passed as a
- parameter to the constructors of various \ref parallel "parallel objects" so that they access the
- MPI library via this common interface.
-
- As an example, the following code excerpt initializes a processor group made of the zero processor.
-
- \verbatim
- #include "CommInterface.hxx"
- #include "ProcessorGroup.hxx"
-
- int main(int argc, char** argv)
- {
- //initialization
- MPI_Init(&argc, &argv);
- MEDCoupling::CommInterface comm_interface;
-
- //setting up a processor group with proc 0
- set<int> procs;
- procs.insert(0);
- MEDCoupling::ProcessorGroup group(procs, comm_interface);
-
- //cleanup
- MPI_Finalize();
- }
- \endverbatim
- */
+ void CommInterface::gatherArrays(MPI_Comm comm, int root, const DataArrayIdType *array, std::vector< MCAuto<DataArrayIdType> >& arraysOut) const
+ {
+ this->gatherArraysT2<mcIdType>(comm,root,array,arraysOut);
+ }
/*!
* Generalized AllGather collective communication.
*/
void CommInterface::allGatherArrays(MPI_Comm comm, const DataArrayIdType *array, std::vector< MCAuto<DataArrayIdType> >& arraysOut) const
{
- std::unique_ptr<mcIdType[]> result, resultIndex;
- int size(this->allGatherArrays(comm,array,result,resultIndex));
- arraysOut.resize(size);
- for(int i = 0 ; i < size ; ++i)
- {
- arraysOut[i] = DataArrayIdType::New();
- mcIdType nbOfEltPack(resultIndex[i+1]-resultIndex[i]);
- arraysOut[i]->alloc(nbOfEltPack,1);
- std::copy(result.get()+resultIndex[i],result.get()+resultIndex[i+1],arraysOut[i]->getPointer());
- }
+ this->allGatherArraysT2<mcIdType>(comm,array,arraysOut);
}
/*!
*/
int CommInterface::allGatherArrays(MPI_Comm comm, const DataArrayIdType *array, std::unique_ptr<mcIdType[]>& result, std::unique_ptr<mcIdType[]>& resultIndex) const
{
- int size;
- this->commSize(comm,&size);
- std::unique_ptr<mcIdType[]> nbOfElems(new mcIdType[size]);
- mcIdType nbOfCellsRequested(array->getNumberOfTuples());
- this->allGather(&nbOfCellsRequested,1,MPI_ID_TYPE,nbOfElems.get(),1,MPI_ID_TYPE,comm);
- mcIdType nbOfCellIdsSum(std::accumulate(nbOfElems.get(),nbOfElems.get()+size,0));
- result.reset(new mcIdType[nbOfCellIdsSum]);
- std::unique_ptr<int[]> nbOfElemsInt( CommInterface::ToIntArray<mcIdType>(nbOfElems,size) );
- std::unique_ptr<int[]> offsetsIn( CommInterface::ComputeOffset(nbOfElemsInt,size) );
- this->allGatherV(array->begin(),nbOfCellsRequested,MPI_ID_TYPE,result.get(),nbOfElemsInt.get(),offsetsIn.get(),MPI_ID_TYPE,comm);
- resultIndex = ComputeOffsetFull<mcIdType>(nbOfElems,size);
- return size;
+ return this->allGatherArraysT<mcIdType>(comm,array,result,resultIndex);
}
void CommInterface::allToAllArrays(MPI_Comm comm, const std::vector< MCAuto<DataArrayDouble> >& arrays, std::vector< MCAuto<DataArrayDouble> >& arraysOut) const