-// Copyright (C) 2007-2014 CEA/DEN, EDF R&D
+// Copyright (C) 2007-2019 CEA/DEN, EDF R&D
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
#include "MEDPARTITIONER_Graph.hxx"
#include "MEDPARTITIONER_Utils.hxx"
-#include "MEDCouplingUMesh.hxx"
-
#include <map>
#include <vector>
#include <string>
#include "BBTree.txx"
-namespace ParaMEDMEM
+namespace MEDCoupling
{
class MEDCouplingUMesh;
class DataArrayInt;
+ class MEDCouplingSkyLineArray;
}
namespace MEDPARTITIONER
class Topology;
class MeshCollectionDriver;
class ParaDomainSelector;
- class SkyLineArray;
class ConnectZone;
class JointFinder;
typedef enum{MedAscii, MedXml, Undefined} DriverType;
- typedef std::multimap<std::pair<int,int>, std::pair<int,int> > NodeMapping ;
+ typedef std::multimap<std::pair<int,mcIdType>, std::pair<int,mcIdType> > NodeMapping ;
typedef std::vector<std::pair<int,int> > NodeList;
class MEDPARTITIONER_EXPORT MeshCollection
void setDriverType(MEDPARTITIONER::DriverType type) { _driver_type=type; }
//creation of the cell graph
- void buildCellGraph(MEDPARTITIONER::SkyLineArray* & array,int *& edgeweights );
+ void buildCellGraph(MEDCoupling::MEDCouplingSkyLineArray* & array,int *& edgeweights );
//creation of the cell graph
- void buildParallelCellGraph(MEDPARTITIONER::SkyLineArray* & array,int *& edgeweights );
+ void buildParallelCellGraph(MEDCoupling::MEDCouplingSkyLineArray* & array,int *& edgeweights );
//creation and partition of the associated graph
Topology* createPartition(int nbdomain, Graph::splitter_type type = Graph::METIS,
//getting mesh dimension
int getMeshDimension() const;
int getNbOfLocalMeshes() const;
- int getNbOfGlobalMeshes() const { return _mesh.size(); }
- int getNbOfLocalCells() const;
- int getNbOfLocalFaces() const;
+ int getNbOfGlobalMeshes() const { return (int)_mesh.size(); }
+ mcIdType getNbOfLocalCells() const;
+ mcIdType getNbOfLocalFaces() const;
//getting a reference to mesh vector
- std::vector<ParaMEDMEM::MEDCouplingUMesh*>& getMesh();
- std::vector<ParaMEDMEM::MEDCouplingUMesh*>& getFaceMesh();
- std::vector<std::vector<ParaMEDMEM::MEDCouplingUMesh*> >& getGroupMeshes();
+ std::vector<MEDCoupling::MEDCouplingUMesh*>& getMesh();
+ std::vector<MEDCoupling::MEDCouplingUMesh*>& getFaceMesh();
+ std::vector<std::vector<MEDCoupling::MEDCouplingUMesh*> >& getGroupMeshes();
- ParaMEDMEM::MEDCouplingUMesh* getMesh(int idomain) const;
- ParaMEDMEM::MEDCouplingUMesh* getFaceMesh(int idomain);
- std::vector<ParaMEDMEM::MEDCouplingUMesh*>& getGroupMeshes(int idomain);
+ MEDCoupling::MEDCouplingUMesh* getMesh(int idomain) const;
+ MEDCoupling::MEDCouplingUMesh* getFaceMesh(int idomain);
+ std::vector<MEDCoupling::MEDCouplingUMesh*>& getGroupMeshes(int idomain);
- std::vector<ParaMEDMEM::DataArrayInt*>& getCellFamilyIds() { return _cell_family_ids; }
- std::vector<ParaMEDMEM::DataArrayInt*>& getFaceFamilyIds() { return _face_family_ids; }
+ std::vector<MEDCoupling::DataArrayIdType*>& getCellFamilyIds() { return _cell_family_ids; }
+ std::vector<MEDCoupling::DataArrayIdType*>& getFaceFamilyIds() { return _face_family_ids; }
- std::map<std::string, ParaMEDMEM::DataArrayInt*>& getMapDataArrayInt() { return _map_dataarray_int; }
- std::map<std::string, ParaMEDMEM::DataArrayDouble*>& getMapDataArrayDouble() { return _map_dataarray_double; }
+ std::map<std::string, MEDCoupling::DataArrayIdType*>& getMapDataArrayInt() { return _map_dataarray_int; }
+ std::map<std::string, MEDCoupling::DataArrayDouble*>& getMapDataArrayDouble() { return _map_dataarray_double; }
- std::map<std::string,int>& getFamilyInfo() { return _family_info; }
+ std::map<std::string,mcIdType>& getFamilyInfo() { return _family_info; }
std::map<std::string, std::vector<std::string> >& getGroupInfo() { return _group_info; }
- ParaMEDMEM::DataArrayDouble* getField(std::string descriptionField, int iold);
+ MEDCoupling::DataArrayDouble* getField(std::string descriptionField, int iold);
std::vector<std::string>& getFieldDescriptions() { return _field_descriptions; }
void prepareFieldDescriptions();
void filterFaceOnCell();
//getting a pointer to topology
Topology* getTopology() const ;
ParaDomainSelector* getParaDomainSelector() const { return _domain_selector; }
+ void setParaDomainSelector(ParaDomainSelector* pds) { _domain_selector = pds; }
//setting a new topology
- void setTopology(Topology* topology);
+ void setTopology(Topology* topology, bool takeOwneship);
//getting/setting the name of the global mesh (as opposed
//to the name of a subdomain \a nn, which is name_nn)
void setName(const std::string& name) { _name=name; }
void setDomainNames(const std::string& name);
+ void setNonEmptyMesh(int number) { _i_non_empty_mesh=number;}
+
//getting/setting the description of the global mesh
std::string getDescription() const { return _description; }
void setDescription(const std::string& name) { _description=name; }
//creates the node mapping between an old collection and the present one
void createNodeMapping(MeshCollection& initialCollection,
- std::multimap<std::pair<int,int>,std::pair<int,int> >& nodeMapping);
+ std::multimap<std::pair<int,mcIdType>,std::pair<int,mcIdType> >& nodeMapping);
void castCellMeshes(MeshCollection& initialCollection,
- std::vector<std::vector<std::vector<int> > >& new2oldIds);
+ std::vector<std::vector<std::vector<mcIdType> > >& new2oldIds,
+ std::vector<MEDCoupling::DataArrayIdType*> & o2nRenumber);
//creates faces on the new collection
void castFaceMeshes(MeshCollection& initialCollection,
- const std::multimap<std::pair<int,int>, std::pair<int,int> >& nodeMapping,
- std::vector<std::vector<std::vector<int> > >& new2oldIds);
+ const std::multimap<std::pair<int,mcIdType>, std::pair<int,mcIdType> >& nodeMapping,
+ std::vector<std::vector<std::vector<mcIdType> > >& new2oldIds);
//constructing connect zones
- void buildConnectZones();
+ void buildConnectZones( const NodeMapping& nodeMapping,
+ const std::vector<MEDCoupling::DataArrayIdType*> & o2nRenumber,
+ int nbInitialDomains );
+
+ // Find faces common with neighbor domains and put them in groups
+ void buildBoundaryFaces();
private:
- void castIntField(std::vector<ParaMEDMEM::MEDCouplingUMesh*>& meshesCastFrom,
- std::vector<ParaMEDMEM::MEDCouplingUMesh*>& meshesCastTo,
- std::vector<ParaMEDMEM::DataArrayInt*>& arrayFrom,
+ void castIntField(std::vector<MEDCoupling::MEDCouplingUMesh*>& meshesCastFrom,
+ std::vector<MEDCoupling::MEDCouplingUMesh*>& meshesCastTo,
+ std::vector<MEDCoupling::DataArrayIdType*>& arrayFrom,
std::string nameArrayTo);
void castAllFields(MeshCollection& initialCollection,
std::string nameArrayTo);
- void findCommonDistantNodes(std::vector<std::vector<std::multimap<int,int> > >& commonDistantNodes);
+ void findCommonDistantNodes(std::vector<std::vector<std::multimap<int,mcIdType> > >& commonDistantNodes);
void remapIntField(int inew, int iold,
- const ParaMEDMEM::MEDCouplingUMesh& sourceMesh,
- const ParaMEDMEM::MEDCouplingUMesh& targetMesh,
- const int* fromArray,
+ const MEDCoupling::MEDCouplingUMesh& sourceMesh,
+ const MEDCoupling::MEDCouplingUMesh& targetMesh,
+ const mcIdType* fromArray,
std::string nameArrayTo,
const BBTreeOfDim* tree);
void remapDoubleField(int inew, int iold,
- ParaMEDMEM::DataArrayDouble* fromArray,
+ MEDCoupling::DataArrayDouble* fromArray,
std::string nameArrayTo,
std::string descriptionField);
- void createJointGroup( const std::vector< int >& faces,
+ void createJointGroup( const std::vector< mcIdType >& faces,
const int inew1,
const int inew2,
const bool is2nd );
ParaDomainSelector* _domain_selector;
//links to meshes
- std::vector<ParaMEDMEM::MEDCouplingUMesh*> _mesh;
- std::vector<ParaMEDMEM::MEDCouplingUMesh*> _face_mesh;
+ std::vector<MEDCoupling::MEDCouplingUMesh*> _mesh;
+ std::vector<MEDCoupling::MEDCouplingUMesh*> _face_mesh;
//index of a non empty mesh within _mesh (in parallel mode all of meshes can be empty)
int _i_non_empty_mesh;
- //links to connectzones
- std::vector<MEDPARTITIONER::ConnectZone*> _connect_zones;
-
//family ids storages
- std::vector<ParaMEDMEM::DataArrayInt*> _cell_family_ids;
- std::vector<ParaMEDMEM::DataArrayInt*> _face_family_ids;
+ std::vector<MEDCoupling::DataArrayIdType*> _cell_family_ids;
+ std::vector<MEDCoupling::DataArrayIdType*> _face_family_ids;
//DataArrayInt* storages
- std::map<std::string, ParaMEDMEM::DataArrayInt*> _map_dataarray_int;
+ std::map<std::string, MEDCoupling::DataArrayIdType*> _map_dataarray_int;
//DataArrayDouble* storages
- std::map<std::string, ParaMEDMEM::DataArrayDouble*> _map_dataarray_double;
+ std::map<std::string, MEDCoupling::DataArrayDouble*> _map_dataarray_double;
//fields to be partitioned
std::vector<std::string> _field_descriptions;
//group family conversion
- std::map<std::string, int> _family_info;
+ std::map<std::string, mcIdType> _family_info;
std::map<std::string, std::vector<std::string> > _group_info;
- //list of groups that are not to be splitted
+ //list of groups that are not to be split
std::vector<std::string> _indivisible_regions;
//name of global mesh
