-// Copyright (C) 2007-2013 CEA/DEN, EDF R&D
+// Copyright (C) 2007-2015 CEA/DEN, EDF R&D
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
-// version 2.1 of the License.
+// version 2.1 of the License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
#include "MEDLoaderDefines.hxx"
#include "MEDFileMeshLL.hxx"
#include "MEDFileUtilities.hxx"
+#include "MEDCouplingPartDefinition.hxx"
#include "MEDFileMeshReadSelector.hxx"
+#include "MEDFileJoint.hxx"
+#include "MEDFileEquivalence.hxx"
#include <map>
#include <list>
-namespace ParaMEDMEM
+namespace MEDCoupling
{
class MEDFileFieldGlobsReal;
class MEDFileField1TSStructItem;
-
+
class MEDFileMesh : public RefCountObject, public MEDFileWritable
{
public:
MEDLOADER_EXPORT static MEDFileMesh *New(const std::string& fileName, MEDFileMeshReadSelector *mrs=0);
- MEDLOADER_EXPORT static MEDFileMesh *New(const std::string& fileName, const std::string& mName, int dt=-1, int it=-1, MEDFileMeshReadSelector *mrs=0);
+ MEDLOADER_EXPORT static MEDFileMesh *New(const std::string& fileName, const std::string& mName, int dt=-1, int it=-1, MEDFileMeshReadSelector *mrs=0, MEDFileJoints* joints=0);
MEDLOADER_EXPORT std::size_t getHeapMemorySizeWithoutChildren() const;
- MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildren() const;
+ MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildrenWithNull() const;
MEDLOADER_EXPORT virtual MEDFileMesh *createNewEmpty() const = 0;
MEDLOADER_EXPORT virtual MEDFileMesh *deepCpy() const = 0;
MEDLOADER_EXPORT virtual MEDFileMesh *shallowCpy() const = 0;
MEDLOADER_EXPORT virtual bool isEqual(const MEDFileMesh *other, double eps, std::string& what) const;
MEDLOADER_EXPORT virtual void clearNonDiscrAttributes() const;
- MEDLOADER_EXPORT void setName(const std::string& name) { _name=name; }
+ MEDLOADER_EXPORT virtual void setName(const std::string& name);
MEDLOADER_EXPORT bool changeNames(const std::vector< std::pair<std::string,std::string> >& modifTab);
MEDLOADER_EXPORT std::string getName() const { return _name; }
MEDLOADER_EXPORT std::string getUnivName() const { return _univ_name; }
MEDLOADER_EXPORT int getIteration() const { return _iteration; }
MEDLOADER_EXPORT void setTimeValue(double time) { _time=time; }
MEDLOADER_EXPORT void setTime(int dt, int it, double time) { _time=time; _iteration=dt; _order=it; }
- MEDLOADER_EXPORT double getTime(int& dt, int& it) { dt=_iteration; it=_order; return _time; }
+ MEDLOADER_EXPORT double getTime(int& dt, int& it) const { dt=_iteration; it=_order; return _time; }
MEDLOADER_EXPORT double getTimeValue() const { return _time; }
MEDLOADER_EXPORT void setTimeUnit(const std::string& unit) { _dt_unit=unit; }
MEDLOADER_EXPORT std::string getTimeUnit() const { return _dt_unit; }
+ MEDLOADER_EXPORT void setAxType(MEDCouplingAxisType at) { _axis_type=at; }
+ MEDLOADER_EXPORT MEDCouplingAxisType getAxType() const { return _axis_type; }
+ MEDLOADER_EXPORT std::vector<INTERP_KERNEL::NormalizedCellType> getAllGeoTypes() const;
MEDLOADER_EXPORT virtual int getNumberOfNodes() const = 0;
+ MEDLOADER_EXPORT virtual int getNumberOfCellsAtLevel(int meshDimRelToMaxExt) const = 0;
+ MEDLOADER_EXPORT virtual bool hasImplicitPart() const = 0;
+ MEDLOADER_EXPORT virtual int buildImplicitPartIfAny(INTERP_KERNEL::NormalizedCellType gt) const = 0;
+ MEDLOADER_EXPORT virtual void releaseImplicitPartIfAny() const = 0;
+ MEDLOADER_EXPORT virtual std::vector<INTERP_KERNEL::NormalizedCellType> getGeoTypesAtLevel(int meshDimRelToMax) const = 0;
+ MEDLOADER_EXPORT virtual int getNumberOfCellsWithType(INTERP_KERNEL::NormalizedCellType ct) const = 0;
MEDLOADER_EXPORT virtual std::vector<int> getNonEmptyLevels() const = 0;
MEDLOADER_EXPORT virtual std::vector<int> getNonEmptyLevelsExt() const = 0;
MEDLOADER_EXPORT virtual std::vector<int> getFamArrNonEmptyLevelsExt() const = 0;
MEDLOADER_EXPORT virtual void write(const std::string& fileName, int mode) const;
MEDLOADER_EXPORT virtual void write(med_idt fid) const;
MEDLOADER_EXPORT virtual int getSizeAtLevel(int meshDimRelToMaxExt) const = 0;
- MEDLOADER_EXPORT virtual MEDCouplingMesh *getGenMeshAtLevel(int meshDimRelToMax, bool renum=false) const = 0;
+ MEDLOADER_EXPORT virtual MEDCouplingMesh *getMeshAtLevel(int meshDimRelToMax, bool renum=false) const = 0;
MEDLOADER_EXPORT virtual std::vector<int> getDistributionOfTypes(int meshDimRelToMax) const;
MEDLOADER_EXPORT virtual void whichAreNodesFetched(const MEDFileField1TSStructItem& st, const MEDFileFieldGlobsReal *globs, std::vector<bool>& nodesFetched) const = 0;
+ MEDLOADER_EXPORT virtual MEDFileMesh *cartesianize() const = 0;
//
MEDLOADER_EXPORT bool areFamsEqual(const MEDFileMesh *other, std::string& what) const;
MEDLOADER_EXPORT bool areGrpsEqual(const MEDFileMesh *other, std::string& what) const;
MEDLOADER_EXPORT void setGroupsOnFamily(const std::string& famName, const std::vector<std::string>& grps);
MEDLOADER_EXPORT std::vector<std::string> getGroupsNames() const;
MEDLOADER_EXPORT std::vector<std::string> getFamiliesNames() const;
+ MEDLOADER_EXPORT std::vector<std::string> getGroupsOnSpecifiedLev(int meshDimRelToMaxExt) const;
+ MEDLOADER_EXPORT std::vector<int> getGrpNonEmptyLevelsExt(const std::string& grp) const;
+ MEDLOADER_EXPORT std::vector<int> getGrpNonEmptyLevels(const std::string& grp) const;
+ MEDLOADER_EXPORT std::vector<int> getGrpsNonEmptyLevels(const std::vector<std::string>& grps) const;
+ MEDLOADER_EXPORT std::vector<int> getGrpsNonEmptyLevelsExt(const std::vector<std::string>& grps) const;
+ MEDLOADER_EXPORT virtual std::vector<int> getFamsNonEmptyLevels(const std::vector<std::string>& fams) const = 0;
+ MEDLOADER_EXPORT virtual std::vector<int> getFamsNonEmptyLevelsExt(const std::vector<std::string>& fams) const = 0;
+ MEDLOADER_EXPORT std::vector<int> getFamNonEmptyLevels(const std::string& fam) const;
+ MEDLOADER_EXPORT std::vector<int> getFamNonEmptyLevelsExt(const std::string& fam) const;
+ MEDLOADER_EXPORT std::vector<std::string> getFamiliesNamesWithFilePointOfView() const;
+ MEDLOADER_EXPORT static std::string GetMagicFamilyStr();
MEDLOADER_EXPORT void assignFamilyNameWithGroupName();
MEDLOADER_EXPORT std::vector<std::string> removeEmptyGroups();
MEDLOADER_EXPORT void removeGroup(const std::string& name);
MEDLOADER_EXPORT void removeFamily(const std::string& name);
MEDLOADER_EXPORT std::vector<std::string> removeOrphanGroups();
MEDLOADER_EXPORT std::vector<std::string> removeOrphanFamilies();
+ MEDLOADER_EXPORT void removeFamiliesReferedByNoGroups();
+ MEDLOADER_EXPORT void rearrangeFamilies();
+ MEDLOADER_EXPORT void checkOrphanFamilyZero() const;
MEDLOADER_EXPORT void changeGroupName(const std::string& oldName, const std::string& newName);
MEDLOADER_EXPORT void changeFamilyName(const std::string& oldName, const std::string& newName);
MEDLOADER_EXPORT void changeFamilyId(int oldId, int newId);
MEDLOADER_EXPORT virtual void setFamilyFieldArr(int meshDimRelToMaxExt, DataArrayInt *famArr) = 0;
MEDLOADER_EXPORT virtual void setRenumFieldArr(int meshDimRelToMaxExt, DataArrayInt *renumArr) = 0;
MEDLOADER_EXPORT virtual void setNameFieldAtLevel(int meshDimRelToMaxExt, DataArrayAsciiChar *nameArr) = 0;
+ MEDLOADER_EXPORT virtual void addNodeGroup(const DataArrayInt *ids) = 0;
+ MEDLOADER_EXPORT virtual void addGroup(int meshDimRelToMaxExt, const DataArrayInt *ids) = 0;
MEDLOADER_EXPORT virtual const DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) const = 0;
+ MEDLOADER_EXPORT virtual DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) = 0;
+ MEDLOADER_EXPORT DataArrayInt *getOrCreateAndGetFamilyFieldAtLevel(int meshDimRelToMaxExt);
MEDLOADER_EXPORT virtual const DataArrayInt *getNumberFieldAtLevel(int meshDimRelToMaxExt) const = 0;
MEDLOADER_EXPORT virtual const DataArrayInt *getRevNumberFieldAtLevel(int meshDimRelToMaxExt) const = 0;
MEDLOADER_EXPORT virtual const DataArrayAsciiChar *getNameFieldAtLevel(int meshDimRelToMaxExt) const = 0;
MEDLOADER_EXPORT virtual DataArrayInt *getNodeFamiliesArr(const std::vector<std::string>& fams, bool renum=false) const;
// tools
MEDLOADER_EXPORT virtual bool unPolyze(std::vector<int>& oldCode, std::vector<int>& newCode, DataArrayInt *& o2nRenumCell) = 0;
+ MEDLOADER_EXPORT int getNumberOfJoints() const;
+ MEDLOADER_EXPORT MEDFileJoints *getJoints() const;
+ MEDLOADER_EXPORT void setJoints( MEDFileJoints* joints );
+ MEDFileEquivalences *getEquivalences() { return _equiv; }
+ const MEDFileEquivalences *getEquivalences() const { return _equiv; }
+ void killEquivalences() { _equiv=(MEDFileEquivalences *)0; }
+ void initializeEquivalences() { _equiv=MEDFileEquivalences::New(this); }
protected:
MEDFileMesh();
//! protected because no way in MED file API to specify this name
void getFamilyRepr(std::ostream& oss) const;
virtual void appendFamilyEntries(const DataArrayInt *famIds, const std::vector< std::vector<int> >& fidsOfGrps, const std::vector<std::string>& grpNames);
virtual void changeFamilyIdArr(int oldId, int newId) = 0;
+ virtual std::list< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > getAllNonNullFamilyIds() const = 0;
+ virtual void loadLL(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs) = 0;
+ void loadLLWithAdditionalItems(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
+ void addGroupUnderground(bool isNodeGroup, const DataArrayInt *ids, DataArrayInt *famArr);
static void TranslateFamilyIds(int offset, DataArrayInt *famArr, std::vector< std::vector<int> >& famIdsPerGrp);
static void ChangeAllGroupsContainingFamily(std::map<std::string, std::vector<std::string> >& groups, const std::string& familyNameToChange, const std::vector<std::string>& newFamiliesNames);
static std::string FindOrCreateAndGiveFamilyWithId(std::map<std::string,int>& families, int id, bool& created);
static std::string CreateNameNotIn(const std::string& nameTry, const std::vector<std::string>& namesToAvoid);
static int PutInThirdComponentOfCodeOffset(std::vector<int>& code, int strt);
+ void writeJoints(med_idt fid) const;
+ void loadJointsFromFile(med_idt fid, MEDFileJoints *toUseInstedOfReading=0);
+ void loadEquivalences(med_idt fid);
+ void deepCpyEquivalences(const MEDFileMesh& other);
+ bool areEquivalencesEqual(const MEDFileMesh *other, std::string& what) const;
+ void getEquivalencesRepr(std::ostream& oss) const;
+ void checkCartesian() const;
protected:
int _order;
int _iteration;
mutable std::string _univ_name;
bool _univ_wr_status;
std::string _desc_name;
+ MEDCouplingAxisType _axis_type;
+ MEDCouplingAutoRefCountObjectPtr<MEDFileJoints> _joints;
+ MEDCouplingAutoRefCountObjectPtr<MEDFileEquivalences> _equiv;
protected:
std::map<std::string, std::vector<std::string> > _groups;
std::map<std::string,int> _families;
MEDLOADER_EXPORT static MEDFileUMesh *New(const std::string& fileName, const std::string& mName, int dt=-1, int it=-1, MEDFileMeshReadSelector *mrs=0);
MEDLOADER_EXPORT static MEDFileUMesh *New(const std::string& fileName, MEDFileMeshReadSelector *mrs=0);
MEDLOADER_EXPORT static MEDFileUMesh *New();
+ MEDLOADER_EXPORT static MEDFileUMesh *LoadPartOf(const std::string& fileName, const std::string& mName, const std::vector<INTERP_KERNEL::NormalizedCellType>& types, const std::vector<int>& slicPerTyp, int dt=-1, int it=-1, MEDFileMeshReadSelector *mrs=0);
+ MEDLOADER_EXPORT static MEDFileUMesh *LoadPartOf(med_idt fid, const std::string& mName, const std::vector<INTERP_KERNEL::NormalizedCellType>& types, const std::vector<int>& slicPerTyp, int dt=-1, int it=-1, MEDFileMeshReadSelector *mrs=0);
MEDLOADER_EXPORT std::size_t getHeapMemorySizeWithoutChildren() const;
- MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildren() const;
+ MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildrenWithNull() const;
MEDLOADER_EXPORT MEDFileMesh *createNewEmpty() const;
MEDLOADER_EXPORT MEDFileMesh *deepCpy() const;
MEDLOADER_EXPORT MEDFileMesh *shallowCpy() const;
MEDLOADER_EXPORT bool isEqual(const MEDFileMesh *other, double eps, std::string& what) const;
MEDLOADER_EXPORT void clearNonDiscrAttributes() const;
- MEDLOADER_EXPORT ~MEDFileUMesh();
+ MEDLOADER_EXPORT void setName(const std::string& name);
//
MEDLOADER_EXPORT int getMaxAbsFamilyIdInArrays() const;
MEDLOADER_EXPORT int getMaxFamilyIdInArrays() const;
MEDLOADER_EXPORT std::string advancedRepr() const;
MEDLOADER_EXPORT int getSizeAtLevel(int meshDimRelToMaxExt) const;
MEDLOADER_EXPORT const DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) const;
+ MEDLOADER_EXPORT DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt);
MEDLOADER_EXPORT const DataArrayInt *getNumberFieldAtLevel(int meshDimRelToMaxExt) const;
MEDLOADER_EXPORT const DataArrayInt *getRevNumberFieldAtLevel(int meshDimRelToMaxExt) const;
MEDLOADER_EXPORT const DataArrayAsciiChar *getNameFieldAtLevel(int meshDimRelToMaxExt) const;
+ MEDLOADER_EXPORT const PartDefinition *getPartDefAtLevel(int meshDimRelToMaxExt, INTERP_KERNEL::NormalizedCellType gt=INTERP_KERNEL::NORM_ERROR) const;
MEDLOADER_EXPORT int getNumberOfNodes() const;
+ MEDLOADER_EXPORT int getNumberOfCellsAtLevel(int meshDimRelToMaxExt) const;
+ MEDLOADER_EXPORT bool hasImplicitPart() const;
+ MEDLOADER_EXPORT int buildImplicitPartIfAny(INTERP_KERNEL::NormalizedCellType gt) const;
+ MEDLOADER_EXPORT void releaseImplicitPartIfAny() const;
MEDLOADER_EXPORT std::vector<INTERP_KERNEL::NormalizedCellType> getGeoTypesAtLevel(int meshDimRelToMax) const;
+ MEDLOADER_EXPORT int getNumberOfCellsWithType(INTERP_KERNEL::NormalizedCellType ct) const;
MEDLOADER_EXPORT void whichAreNodesFetched(const MEDFileField1TSStructItem& st, const MEDFileFieldGlobsReal *globs, std::vector<bool>& nodesFetched) const;
+ MEDLOADER_EXPORT MEDFileMesh *cartesianize() const;
MEDLOADER_EXPORT std::vector<int> getNonEmptyLevels() const;
MEDLOADER_EXPORT std::vector<int> getNonEmptyLevelsExt() const;
MEDLOADER_EXPORT std::vector<int> getFamArrNonEmptyLevelsExt() const;
MEDLOADER_EXPORT std::vector<int> getNumArrNonEmptyLevelsExt() const;
MEDLOADER_EXPORT std::vector<int> getNameArrNonEmptyLevelsExt() const;
- MEDLOADER_EXPORT std::vector<int> getGrpNonEmptyLevels(const std::string& grp) const;
- MEDLOADER_EXPORT std::vector<int> getGrpNonEmptyLevelsExt(const std::string& grp) const;
- MEDLOADER_EXPORT std::vector<int> getFamNonEmptyLevels(const std::string& fam) const;
- MEDLOADER_EXPORT std::vector<int> getFamNonEmptyLevelsExt(const std::string& fam) const;
- MEDLOADER_EXPORT std::vector<int> getGrpsNonEmptyLevels(const std::vector<std::string>& grps) const;
- MEDLOADER_EXPORT std::vector<int> getGrpsNonEmptyLevelsExt(const std::vector<std::string>& grps) const;
MEDLOADER_EXPORT std::vector<int> getFamsNonEmptyLevels(const std::vector<std::string>& fams) const;
MEDLOADER_EXPORT std::vector<int> getFamsNonEmptyLevelsExt(const std::vector<std::string>& fams) const;
- MEDLOADER_EXPORT std::vector<std::string> getGroupsOnSpecifiedLev(int meshDimRelToMaxExt) const;
MEDLOADER_EXPORT DataArrayDouble *getCoords() const;
MEDLOADER_EXPORT MEDCouplingUMesh *getGroup(int meshDimRelToMaxExt, const std::string& grp, bool renum=false) const;
MEDLOADER_EXPORT MEDCouplingUMesh *getGroups(int meshDimRelToMaxExt, const std::vector<std::string>& grps, bool renum=false) const;
MEDLOADER_EXPORT MEDCouplingUMesh *getFamily(int meshDimRelToMaxExt, const std::string& fam, bool renum=false) const;
MEDLOADER_EXPORT MEDCouplingUMesh *getFamilies(int meshDimRelToMaxExt, const std::vector<std::string>& fams, bool renum=false) const;
MEDLOADER_EXPORT DataArrayInt *getFamiliesArr(int meshDimRelToMaxExt, const std::vector<std::string>& fams, bool renum=false) const;
- MEDLOADER_EXPORT MEDCouplingUMesh *getMeshAtLevel(int meshDimRelToMaxExt, bool renum=false) const;
- MEDLOADER_EXPORT MEDCouplingMesh *getGenMeshAtLevel(int meshDimRelToMax, bool renum=false) const;
+ MEDLOADER_EXPORT MEDCouplingUMesh *getMeshAtLevel(int meshDimRelToMax, bool renum=false) const;
MEDLOADER_EXPORT std::vector<int> getDistributionOfTypes(int meshDimRelToMax) const;
MEDLOADER_EXPORT MEDCouplingUMesh *getLevel0Mesh(bool renum=false) const;
MEDLOADER_EXPORT MEDCouplingUMesh *getLevelM1Mesh(bool renum=false) const;
MEDLOADER_EXPORT MEDCoupling1GTUMesh *getDirectUndergroundSingleGeoTypeMesh(INTERP_KERNEL::NormalizedCellType gt) const;
MEDLOADER_EXPORT DataArrayInt *extractFamilyFieldOnGeoType(INTERP_KERNEL::NormalizedCellType gt) const;
MEDLOADER_EXPORT DataArrayInt *extractNumberFieldOnGeoType(INTERP_KERNEL::NormalizedCellType gt) const;
+ MEDLOADER_EXPORT int getRelativeLevOnGeoType(INTERP_KERNEL::NormalizedCellType gt) const;
//
MEDLOADER_EXPORT void setFamilyNameAttachedOnId(int id, const std::string& newFamName);
MEDLOADER_EXPORT void setCoords(DataArrayDouble *coords);
MEDLOADER_EXPORT void setGroupsOnSetMesh(int meshDimRelToMax, const std::vector<const MEDCouplingUMesh *>& ms, bool renum=false);
MEDLOADER_EXPORT void optimizeFamilies();
// tools
- MEDLOADER_EXPORT void duplicateNodesOnM1Group(const std::string& grpNameM1, DataArrayInt *&nodesDuplicated, DataArrayInt *&cellsModified, DataArrayInt *&cellsNotModified);
+ MEDLOADER_EXPORT void buildInnerBoundaryAlongM1Group(const std::string& grpNameM1, DataArrayInt *&nodesDuplicated, DataArrayInt *&cellsModified, DataArrayInt *&cellsNotModified);
MEDLOADER_EXPORT bool unPolyze(std::vector<int>& oldCode, std::vector<int>& newCode, DataArrayInt *& o2nRenumCell);
MEDLOADER_EXPORT DataArrayInt *zipCoords();
+ MEDLOADER_EXPORT MEDFileUMesh *buildExtrudedMesh(const MEDCouplingUMesh *m1D, int policy) const;
+ MEDLOADER_EXPORT MEDFileUMesh *linearToQuadratic(int conversionType=0, double eps=1e-12) const;
+ MEDLOADER_EXPORT MEDFileUMesh *quadraticToLinear(double eps=1e-12) const;
+ // serialization
+ MEDLOADER_EXPORT void serialize(std::vector<double>& tinyDouble, std::vector<int>& tinyInt, std::vector<std::string>& tinyStr,
+ std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> >& bigArraysI, MEDCouplingAutoRefCountObjectPtr<DataArrayDouble>& bigArrayD);
+ MEDLOADER_EXPORT void unserialize(std::vector<double>& tinyDouble, std::vector<int>& tinyInt, std::vector<std::string>& tinyStr,
+ std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> >& bigArraysI, MEDCouplingAutoRefCountObjectPtr<DataArrayDouble>& bigArrayD);
private:
+ MEDLOADER_EXPORT ~MEDFileUMesh();
void writeLL(med_idt fid) const;
MEDFileUMesh();
MEDFileUMesh(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
- void loadUMeshFromFile(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
+ void loadPartUMeshFromFile(med_idt fid, const std::string& mName, const std::vector<INTERP_KERNEL::NormalizedCellType>& types, const std::vector<int>& slicPerTyp, int dt=-1, int it=-1, MEDFileMeshReadSelector *mrs=0);
+ void loadLL(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
+ void dispatchLoadedPart(med_idt fid, const MEDFileUMeshL2& loaderl2, const std::string& mName, MEDFileMeshReadSelector *mrs);
const MEDFileUMeshSplitL1 *getMeshAtLevSafe(int meshDimRelToMaxExt) const;
MEDFileUMeshSplitL1 *getMeshAtLevSafe(int meshDimRelToMaxExt);
void checkMeshDimCoherency(int meshDim, int meshDimRelToMax) const;
void synchronizeTinyInfoOnLeaves() const;
void changeFamilyIdArr(int oldId, int newId);
std::list< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > getAllNonNullFamilyIds() const;
- void addGroupUnderground(bool isNodeGroup, const DataArrayInt *ids, DataArrayInt *famArr);
MEDCouplingAutoRefCountObjectPtr<MEDFileUMeshSplitL1>& checkAndGiveEntryInSplitL1(int meshDimRelToMax, MEDCouplingPointSet *m);
private:
std::vector< MEDCouplingAutoRefCountObjectPtr<MEDFileUMeshSplitL1> > _ms;
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _num_coords;
MEDCouplingAutoRefCountObjectPtr<DataArrayAsciiChar> _name_coords;
mutable MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _rev_num_coords;
+ MEDCouplingAutoRefCountObjectPtr<PartDefinition> _part_coords;
};
class MEDFileStructuredMesh : public MEDFileMesh
friend class MEDFileMesh;
public:
MEDLOADER_EXPORT std::size_t getHeapMemorySizeWithoutChildren() const;
- MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildren() const;
+ MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildrenWithNull() const;
MEDLOADER_EXPORT int getMaxAbsFamilyIdInArrays() const;
MEDLOADER_EXPORT int getMaxFamilyIdInArrays() const;
MEDLOADER_EXPORT int getMinFamilyIdInArrays() const;
MEDLOADER_EXPORT void clearNonDiscrAttributes() const;
MEDLOADER_EXPORT DataArrayInt *getFamiliesArr(int meshDimRelToMaxExt, const std::vector<std::string>& fams, bool renum=false) const;
MEDLOADER_EXPORT const DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) const;
+ MEDLOADER_EXPORT DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt);
MEDLOADER_EXPORT void setFamilyFieldArr(int meshDimRelToMaxExt, DataArrayInt *famArr);
MEDLOADER_EXPORT void setRenumFieldArr(int meshDimRelToMaxExt, DataArrayInt *renumArr);
MEDLOADER_EXPORT void setNameFieldAtLevel(int meshDimRelToMaxExt, DataArrayAsciiChar *nameArr);
+ MEDLOADER_EXPORT void addNodeGroup(const DataArrayInt *ids);
+ MEDLOADER_EXPORT void addGroup(int meshDimRelToMaxExt, const DataArrayInt *ids);
MEDLOADER_EXPORT const DataArrayInt *getNumberFieldAtLevel(int meshDimRelToMaxExt) const;
MEDLOADER_EXPORT const DataArrayInt *getRevNumberFieldAtLevel(int meshDimRelToMaxExt) const;
MEDLOADER_EXPORT const DataArrayAsciiChar *getNameFieldAtLevel(int meshDimRelToMaxExt) const;
MEDLOADER_EXPORT std::vector<int> getFamArrNonEmptyLevelsExt() const;
MEDLOADER_EXPORT std::vector<int> getNumArrNonEmptyLevelsExt() const;
MEDLOADER_EXPORT std::vector<int> getNameArrNonEmptyLevelsExt() const;
- MEDCouplingMesh *getGenMeshAtLevel(int meshDimRelToMax, bool renum=false) const;
+ MEDLOADER_EXPORT MEDCouplingMesh *getMeshAtLevel(int meshDimRelToMax, bool renum=false) const;
+ MEDLOADER_EXPORT std::vector<int> getFamsNonEmptyLevels(const std::vector<std::string>& fams) const;
+ MEDLOADER_EXPORT std::vector<int> getFamsNonEmptyLevelsExt(const std::vector<std::string>& fams) const;
MEDLOADER_EXPORT int getSizeAtLevel(int meshDimRelToMaxExt) const;
MEDLOADER_EXPORT int getNumberOfNodes() const;
+ MEDLOADER_EXPORT int getNumberOfCellsAtLevel(int meshDimRelToMaxExt) const;
+ MEDLOADER_EXPORT bool hasImplicitPart() const;
+ MEDLOADER_EXPORT int buildImplicitPartIfAny(INTERP_KERNEL::NormalizedCellType gt) const;
+ MEDLOADER_EXPORT void releaseImplicitPartIfAny() const;
+ MEDLOADER_EXPORT MEDCoupling1SGTUMesh *getImplicitFaceMesh() const;
+ MEDLOADER_EXPORT std::vector<INTERP_KERNEL::NormalizedCellType> getGeoTypesAtLevel(int meshDimRelToMax) const;
+ MEDLOADER_EXPORT int getNumberOfCellsWithType(INTERP_KERNEL::NormalizedCellType ct) const;
MEDLOADER_EXPORT void whichAreNodesFetched(const MEDFileField1TSStructItem& st, const MEDFileFieldGlobsReal *globs, std::vector<bool>& nodesFetched) const;
+ MEDLOADER_EXPORT virtual const MEDCouplingStructuredMesh *getStructuredMesh() const = 0;
// tools
MEDLOADER_EXPORT bool unPolyze(std::vector<int>& oldCode, std::vector<int>& newCode, DataArrayInt *& o2nRenumCell);
protected:
+ ~MEDFileStructuredMesh() { }
void changeFamilyIdArr(int oldId, int newId);
+ std::list< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > getAllNonNullFamilyIds() const;
void deepCpyAttributes();
void loadStrMeshFromFile(MEDFileStrMeshL2 *strm, med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
void writeStructuredLL(med_idt fid, const std::string& maa) const;
- virtual const MEDCouplingStructuredMesh *getStructuredMesh() const = 0;
+ void buildImplicitPart() const;
+ void buildMinusOneImplicitPartIfNeeded() const;
static med_geometry_type GetGeoTypeFromMeshDim(int meshDim);
+ private:
+ static void LoadStrMeshDAFromFile(med_idt fid, int meshDim, int dt, int it, const std::string& mName, MEDFileMeshReadSelector *mrs,
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt>& famCells, MEDCouplingAutoRefCountObjectPtr<DataArrayInt>& numCells, MEDCouplingAutoRefCountObjectPtr<DataArrayAsciiChar>& namesCells);
private:
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _fam_nodes;
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _num_nodes;
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _fam_cells;
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _num_cells;
MEDCouplingAutoRefCountObjectPtr<DataArrayAsciiChar> _names_cells;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _fam_faces;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _num_faces;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayAsciiChar> _names_faces;
mutable MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _rev_num_nodes;
mutable MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _rev_num_cells;
+ mutable MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> _faces_if_necessary;
};
class MEDFileCMesh : public MEDFileStructuredMesh
MEDLOADER_EXPORT static MEDFileCMesh *New(const std::string& fileName, MEDFileMeshReadSelector *mrs=0);
MEDLOADER_EXPORT static MEDFileCMesh *New(const std::string& fileName, const std::string& mName, int dt=-1, int it=-1, MEDFileMeshReadSelector *mrs=0);
MEDLOADER_EXPORT std::size_t getHeapMemorySizeWithoutChildren() const;
- MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildren() const;
+ MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildrenWithNull() const;
MEDLOADER_EXPORT MEDFileMesh *createNewEmpty() const;
MEDLOADER_EXPORT MEDFileMesh *deepCpy() const;
MEDLOADER_EXPORT MEDFileMesh *shallowCpy() const;
MEDLOADER_EXPORT void clearNonDiscrAttributes() const;
MEDLOADER_EXPORT const MEDCouplingCMesh *getMesh() const;
MEDLOADER_EXPORT void setMesh(MEDCouplingCMesh *m);
+ MEDLOADER_EXPORT MEDFileMesh *cartesianize() const;
private:
+ ~MEDFileCMesh() { }
const MEDCouplingStructuredMesh *getStructuredMesh() const;
void writeLL(med_idt fid) const;
MEDFileCMesh();
void synchronizeTinyInfoOnLeaves() const;
MEDFileCMesh(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
- void loadCMeshFromFile(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
+ void loadLL(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
private:
MEDCouplingAutoRefCountObjectPtr<MEDCouplingCMesh> _cmesh;
};
MEDLOADER_EXPORT static MEDFileCurveLinearMesh *New(const std::string& fileName, MEDFileMeshReadSelector *mrs=0);
MEDLOADER_EXPORT static MEDFileCurveLinearMesh *New(const std::string& fileName, const std::string& mName, int dt=-1, int it=-1, MEDFileMeshReadSelector *mrs=0);
MEDLOADER_EXPORT std::size_t getHeapMemorySizeWithoutChildren() const;
- MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildren() const;
+ MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildrenWithNull() const;
MEDLOADER_EXPORT MEDFileMesh *createNewEmpty() const;
MEDLOADER_EXPORT MEDFileMesh *deepCpy() const;
MEDLOADER_EXPORT MEDFileMesh *shallowCpy() const;
MEDLOADER_EXPORT void clearNonDiscrAttributes() const;
MEDLOADER_EXPORT const MEDCouplingCurveLinearMesh *getMesh() const;
MEDLOADER_EXPORT void setMesh(MEDCouplingCurveLinearMesh *m);
+ MEDLOADER_EXPORT MEDFileMesh *cartesianize() const;
private:
+ ~MEDFileCurveLinearMesh() { }
MEDFileCurveLinearMesh();
MEDFileCurveLinearMesh(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);
const MEDCouplingStructuredMesh *getStructuredMesh() const;
void synchronizeTinyInfoOnLeaves() const;
void writeLL(med_idt fid) const;
- void loadCLMeshFromFile(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);//to imp
+ void loadLL(med_idt fid, const std::string& mName, int dt, int it, MEDFileMeshReadSelector *mrs);//to imp
private:
MEDCouplingAutoRefCountObjectPtr<MEDCouplingCurveLinearMesh> _clmesh;
};
MEDLOADER_EXPORT static MEDFileMeshMultiTS *New(const std::string& fileName, const std::string& mName);
MEDLOADER_EXPORT MEDFileMeshMultiTS *deepCpy() const;
MEDLOADER_EXPORT std::size_t getHeapMemorySizeWithoutChildren() const;
- MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildren() const;
+ MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildrenWithNull() const;
MEDLOADER_EXPORT std::string getName() const;
MEDLOADER_EXPORT void setName(const std::string& newMeshName);
MEDLOADER_EXPORT bool changeNames(const std::vector< std::pair<std::string,std::string> >& modifTab);
+ MEDLOADER_EXPORT void cartesianizeMe();
MEDLOADER_EXPORT MEDFileMesh *getOneTimeStep() const;
MEDLOADER_EXPORT void write(med_idt fid) const;
MEDLOADER_EXPORT void write(const std::string& fileName, int mode) const;
MEDLOADER_EXPORT void setOneTimeStep(MEDFileMesh *mesh1TimeStep);
+ MEDLOADER_EXPORT MEDFileJoints *getJoints() const;
+ MEDLOADER_EXPORT void setJoints(MEDFileJoints* joints);
private:
+ ~MEDFileMeshMultiTS() { }
void loadFromFile(const std::string& fileName, const std::string& mName);
MEDFileMeshMultiTS();
MEDFileMeshMultiTS(const std::string& fileName);
MEDLOADER_EXPORT static MEDFileMeshes *New(const std::string& fileName);
MEDLOADER_EXPORT MEDFileMeshes *deepCpy() const;
MEDLOADER_EXPORT std::size_t getHeapMemorySizeWithoutChildren() const;
- MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildren() const;
+ MEDLOADER_EXPORT std::vector<const BigMemoryObject *> getDirectChildrenWithNull() const;
MEDLOADER_EXPORT std::string simpleRepr() const;
MEDLOADER_EXPORT void simpleReprWithoutHeader(std::ostream& oss) const;
MEDLOADER_EXPORT void write(const std::string& fileName, int mode) const;
MEDLOADER_EXPORT MEDFileMesh *getMeshWithName(const std::string& mname) const;
MEDLOADER_EXPORT std::vector<std::string> getMeshesNames() const;
MEDLOADER_EXPORT bool changeNames(const std::vector< std::pair<std::string,std::string> >& modifTab);
+ MEDLOADER_EXPORT void cartesianizeMe();
//
MEDLOADER_EXPORT void resize(int newSize);
MEDLOADER_EXPORT void pushMesh(MEDFileMesh *mesh);
MEDLOADER_EXPORT void setMeshAtPos(int i, MEDFileMesh *mesh);
MEDLOADER_EXPORT void destroyMeshAtPos(int i);
private:
+ ~MEDFileMeshes() { }
void checkCoherency() const;
void loadFromFile(const std::string& fileName);
MEDFileMeshes();
MEDLOADER_EXPORT MEDFileMesh *nextt();
private:
MEDCouplingAutoRefCountObjectPtr<MEDFileMeshes> _ms;
- int _iter_id;
- int _nb_iter;
+ int _iter_id;
+ int _nb_iter;
};
}
