-// Copyright (C) 2007-2012 CEA/DEN, EDF R&D
+// Copyright (C) 2007-2013 CEA/DEN, EDF R&D
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
#include "MEDFileUtilities.hxx"
#include <map>
+#include <list>
namespace ParaMEDMEM
{
public:
static MEDFileMesh *New(const char *fileName) throw(INTERP_KERNEL::Exception);
static MEDFileMesh *New(const char *fileName, const char *mName, int dt=-1, int it=-1) throw(INTERP_KERNEL::Exception);
+ std::size_t getHeapMemorySize() const;
+ virtual MEDFileMesh *deepCpy() const throw(INTERP_KERNEL::Exception) = 0;
+ virtual MEDFileMesh *shallowCpy() const throw(INTERP_KERNEL::Exception) = 0;
virtual bool isEqual(const MEDFileMesh *other, double eps, std::string& what) const;
virtual void clearNonDiscrAttributes() const;
void setName(const char *name) { _name=name; }
void changeGroupName(const char *oldName, const char *newName) throw(INTERP_KERNEL::Exception);
void changeFamilyName(const char *oldName, const char *newName) throw(INTERP_KERNEL::Exception);
void changeFamilyId(int oldId, int newId) throw(INTERP_KERNEL::Exception);
+ void changeAllGroupsContainingFamily(const char *familyNameToChange, const std::vector<std::string>& newFamiliesNames) throw(INTERP_KERNEL::Exception);
int getFamilyId(const char *name) const throw(INTERP_KERNEL::Exception);
int getMaxFamilyId() const throw(INTERP_KERNEL::Exception);
int getMinFamilyId() const throw(INTERP_KERNEL::Exception);
+ int getTheMaxFamilyId() const throw(INTERP_KERNEL::Exception);
+ int getTheMinFamilyId() const throw(INTERP_KERNEL::Exception);
+ virtual int getMaxFamilyIdInArrays() const throw(INTERP_KERNEL::Exception) = 0;
+ virtual int getMinFamilyIdInArrays() const throw(INTERP_KERNEL::Exception) = 0;
DataArrayInt *getAllFamiliesIdsReferenced() const throw(INTERP_KERNEL::Exception);
std::vector<int> getFamiliesIds(const std::vector<std::string>& famNames) const throw(INTERP_KERNEL::Exception);
std::string getFamilyNameGivenId(int id) const throw(INTERP_KERNEL::Exception);
virtual void setGroupsAtLevel(int meshDimRelToMaxExt, const std::vector<const DataArrayInt *>& grps, bool renum=false) throw(INTERP_KERNEL::Exception);
virtual void setFamilyFieldArr(int meshDimRelToMaxExt, DataArrayInt *famArr) throw(INTERP_KERNEL::Exception) = 0;
virtual void setRenumFieldArr(int meshDimRelToMaxExt, DataArrayInt *renumArr) throw(INTERP_KERNEL::Exception) = 0;
+ virtual void setNameFieldAtLevel(int meshDimRelToMaxExt, DataArrayAsciiChar *nameArr) throw(INTERP_KERNEL::Exception) = 0;
virtual const DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception) = 0;
virtual const DataArrayInt *getNumberFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception) = 0;
virtual const DataArrayInt *getRevNumberFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception) = 0;
+ virtual const DataArrayAsciiChar *getNameFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception) = 0;
virtual DataArrayInt *getFamiliesArr(int meshDimRelToMaxExt, const std::vector<std::string>& fams, bool renum=false) const throw(INTERP_KERNEL::Exception) = 0;
virtual DataArrayInt *getGroupsArr(int meshDimRelToMaxExt, const std::vector<std::string>& grps, bool renum=false) const throw(INTERP_KERNEL::Exception);
virtual DataArrayInt *getGroupArr(int meshDimRelToMaxExt, const char *grp, bool renum=false) const throw(INTERP_KERNEL::Exception);
void dealWithTinyInfo(const MEDCouplingMesh *m) throw(INTERP_KERNEL::Exception);
virtual void synchronizeTinyInfoOnLeaves() const = 0;
void getFamilyRepr(std::ostream& oss) const;
- virtual void appendFamilyEntries(const std::set<int>& famIds, const std::vector< std::vector<int> >& fidsOfGrps, const std::vector<std::string>& grpNames);
+ virtual void appendFamilyEntries(const DataArrayInt *famIds, const std::vector< std::vector<int> >& fidsOfGrps, const std::vector<std::string>& grpNames);
virtual void changeFamilyIdArr(int oldId, int newId) throw(INTERP_KERNEL::Exception) = 0;
static void TranslateFamilyIds(int offset, DataArrayInt *famArr, std::vector< std::vector<int> >& famIdsPerGrp);
+ static void ChangeAllGroupsContainingFamily(std::map<std::string, std::vector<std::string> >& groups, const char *familyNameToChange, const std::vector<std::string>& newFamiliesNames) throw(INTERP_KERNEL::Exception);
+ static std::string FindOrCreateAndGiveFamilyWithId(std::map<std::string,int>& families, int id, bool& created) throw(INTERP_KERNEL::Exception);
static std::string CreateNameNotIn(const std::string& nameTry, const std::vector<std::string>& namesToAvoid) throw(INTERP_KERNEL::Exception);
static int PutInThirdComponentOfCodeOffset(std::vector<int>& code, int strt) throw(INTERP_KERNEL::Exception);
protected:
static MEDFileUMesh *New(const char *fileName, const char *mName, int dt=-1, int it=-1) throw(INTERP_KERNEL::Exception);
static MEDFileUMesh *New(const char *fileName) throw(INTERP_KERNEL::Exception);
static MEDFileUMesh *New();
+ std::size_t getHeapMemorySize() const;
+ MEDFileMesh *deepCpy() const throw(INTERP_KERNEL::Exception);
+ MEDFileMesh *shallowCpy() const throw(INTERP_KERNEL::Exception);
bool isEqual(const MEDFileMesh *other, double eps, std::string& what) const;
void clearNonDiscrAttributes() const;
~MEDFileUMesh();
//
+ int getMaxFamilyIdInArrays() const throw(INTERP_KERNEL::Exception);
+ int getMinFamilyIdInArrays() const throw(INTERP_KERNEL::Exception);
int getMeshDimension() const throw(INTERP_KERNEL::Exception);
int getSpaceDimension() const throw(INTERP_KERNEL::Exception);
std::string simpleRepr() const;
const DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
const DataArrayInt *getNumberFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
const DataArrayInt *getRevNumberFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
+ const DataArrayAsciiChar *getNameFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
int getNumberOfNodes() const throw(INTERP_KERNEL::Exception);
std::vector<int> getNonEmptyLevels() const;
std::vector<int> getNonEmptyLevelsExt() const;
void eraseGroupsAtLevel(int meshDimRelToMaxExt) throw(INTERP_KERNEL::Exception);
void setFamilyFieldArr(int meshDimRelToMaxExt, DataArrayInt *famArr) throw(INTERP_KERNEL::Exception);
void setRenumFieldArr(int meshDimRelToMaxExt, DataArrayInt *renumArr) throw(INTERP_KERNEL::Exception);
- void addNodeGroup(const std::string& name, const std::vector<int>& ids) throw(INTERP_KERNEL::Exception);
+ void setNameFieldAtLevel(int meshDimRelToMaxExt, DataArrayAsciiChar *nameArr) throw(INTERP_KERNEL::Exception);
+ void addNodeGroup(const DataArrayInt *ids) throw(INTERP_KERNEL::Exception);
+ void addGroup(int meshDimRelToMaxExt, const DataArrayInt *ids) throw(INTERP_KERNEL::Exception);
void removeMeshAtLevel(int meshDimRelToMax) throw(INTERP_KERNEL::Exception);
void setMeshAtLevel(int meshDimRelToMax, MEDCouplingUMesh *m, bool newOrOld=false) throw(INTERP_KERNEL::Exception);
void setMeshAtLevelGen(int meshDimRelToMax, MEDCouplingUMesh *m, bool newOrOld) throw(INTERP_KERNEL::Exception);
void setGroupsFromScratch(int meshDimRelToMax, const std::vector<const MEDCouplingUMesh *>& ms) throw(INTERP_KERNEL::Exception);
void setGroupsOnSetMesh(int meshDimRelToMax, const std::vector<const MEDCouplingUMesh *>& ms, bool renum) throw(INTERP_KERNEL::Exception);
void optimizeFamilies() throw(INTERP_KERNEL::Exception);
- void duplicateNodesOnM1Group(const char *grpNameM1, DataArrayInt *&nodesDuplicated, DataArrayInt *&cellsModified, DataArrayInt *&cellsNotModified) throw(INTERP_KERNEL::Exception);
// tools
+ void duplicateNodesOnM1Group(const char *grpNameM1, DataArrayInt *&nodesDuplicated, DataArrayInt *&cellsModified, DataArrayInt *&cellsNotModified) throw(INTERP_KERNEL::Exception);
bool unPolyze(std::vector<int>& oldCode, std::vector<int>& newCode, DataArrayInt *& o2nRenumCell) throw(INTERP_KERNEL::Exception);
+ DataArrayInt *zipCoords() throw(INTERP_KERNEL::Exception);
private:
void writeLL(med_idt fid) const throw(INTERP_KERNEL::Exception);
MEDFileUMesh();
void computeRevNum() const;
void synchronizeTinyInfoOnLeaves() const;
void changeFamilyIdArr(int oldId, int newId) throw(INTERP_KERNEL::Exception);
+ std::list< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > getAllNonNullFamilyIds() const;
+ void addGroupUnderground(const DataArrayInt *ids, DataArrayInt *famArr) throw(INTERP_KERNEL::Exception);
private:
std::vector< MEDCouplingAutoRefCountObjectPtr<MEDFileUMeshSplitL1> > _ms;
MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> _coords;
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _fam_coords;
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _num_coords;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayAsciiChar> _name_coords;
mutable MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _rev_num_coords;
};
- class MEDLOADER_EXPORT MEDFileCMesh : public MEDFileMesh
+ class MEDLOADER_EXPORT MEDFileStructuredMesh : public MEDFileMesh
+ {
+ friend class MEDFileMesh;
+ public:
+ std::size_t getHeapMemorySize() const;
+ int getMaxFamilyIdInArrays() const throw(INTERP_KERNEL::Exception);
+ int getMinFamilyIdInArrays() const throw(INTERP_KERNEL::Exception);
+ bool isEqual(const MEDFileMesh *other, double eps, std::string& what) const;
+ void clearNonDiscrAttributes() const;
+ DataArrayInt *getFamiliesArr(int meshDimRelToMaxExt, const std::vector<std::string>& fams, bool renum=false) const throw(INTERP_KERNEL::Exception);
+ const DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
+ void setFamilyFieldArr(int meshDimRelToMaxExt, DataArrayInt *famArr) throw(INTERP_KERNEL::Exception);
+ void setRenumFieldArr(int meshDimRelToMaxExt, DataArrayInt *renumArr) throw(INTERP_KERNEL::Exception);
+ void setNameFieldAtLevel(int meshDimRelToMaxExt, DataArrayAsciiChar *nameArr) throw(INTERP_KERNEL::Exception);
+ const DataArrayInt *getNumberFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
+ const DataArrayInt *getRevNumberFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
+ const DataArrayAsciiChar *getNameFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
+ std::vector<int> getNonEmptyLevels() const;
+ std::vector<int> getNonEmptyLevelsExt() const;
+ MEDCouplingMesh *getGenMeshAtLevel(int meshDimRelToMax, bool renum=false) const throw(INTERP_KERNEL::Exception);
+ int getSizeAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
+ int getNumberOfNodes() const throw(INTERP_KERNEL::Exception);
+ // tools
+ bool unPolyze(std::vector<int>& oldCode, std::vector<int>& newCode, DataArrayInt *& o2nRenumCell) throw(INTERP_KERNEL::Exception);
+ protected:
+ void changeFamilyIdArr(int oldId, int newId) throw(INTERP_KERNEL::Exception);
+ void deepCpyAttributes() throw(INTERP_KERNEL::Exception);
+ void loadStrMeshFromFile(MEDFileStrMeshL2 *strm, med_idt fid, const char *mName, int dt, int it) throw(INTERP_KERNEL::Exception);
+ void writeStructuredLL(med_idt fid, const char *maa) const throw(INTERP_KERNEL::Exception);
+ virtual const MEDCouplingStructuredMesh *getStructuredMesh() const = 0;
+ static med_geometry_type GetGeoTypeFromMeshDim(int meshDim) throw(INTERP_KERNEL::Exception);
+ private:
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _fam_nodes;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _num_nodes;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayAsciiChar> _names_nodes;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _fam_cells;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _num_cells;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayAsciiChar> _names_cells;
+ mutable MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _rev_num_nodes;
+ mutable MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _rev_num_cells;
+ };
+
+ class MEDLOADER_EXPORT MEDFileCMesh : public MEDFileStructuredMesh
{
friend class MEDFileMesh;
public:
static MEDFileCMesh *New();
static MEDFileCMesh *New(const char *fileName) throw(INTERP_KERNEL::Exception);
static MEDFileCMesh *New(const char *fileName, const char *mName, int dt=-1, int it=-1) throw(INTERP_KERNEL::Exception);
+ std::size_t getHeapMemorySize() const;
+ MEDFileMesh *deepCpy() const throw(INTERP_KERNEL::Exception);
+ MEDFileMesh *shallowCpy() const throw(INTERP_KERNEL::Exception);
bool isEqual(const MEDFileMesh *other, double eps, std::string& what) const;
int getMeshDimension() const throw(INTERP_KERNEL::Exception);
std::string simpleRepr() const;
std::string advancedRepr() const;
void clearNonDiscrAttributes() const;
const MEDCouplingCMesh *getMesh() const;
- MEDCouplingMesh *getGenMeshAtLevel(int meshDimRelToMax, bool renum=false) const throw(INTERP_KERNEL::Exception);
void setMesh(MEDCouplingCMesh *m) throw(INTERP_KERNEL::Exception);
- int getSizeAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
- DataArrayInt *getFamiliesArr(int meshDimRelToMaxExt, const std::vector<std::string>& fams, bool renum=false) const throw(INTERP_KERNEL::Exception);
- void setFamilyFieldArr(int meshDimRelToMaxExt, DataArrayInt *famArr) throw(INTERP_KERNEL::Exception);
- void setRenumFieldArr(int meshDimRelToMaxExt, DataArrayInt *renumArr) throw(INTERP_KERNEL::Exception);
- int getNumberOfNodes() const throw(INTERP_KERNEL::Exception);
- std::vector<int> getNonEmptyLevels() const;
- std::vector<int> getNonEmptyLevelsExt() const;
- const DataArrayInt *getFamilyFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
- const DataArrayInt *getNumberFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
- const DataArrayInt *getRevNumberFieldAtLevel(int meshDimRelToMaxExt) const throw(INTERP_KERNEL::Exception);
- // tools
- bool unPolyze(std::vector<int>& oldCode, std::vector<int>& newCode, DataArrayInt *& o2nRenumCell) throw(INTERP_KERNEL::Exception);
private:
+ const MEDCouplingStructuredMesh *getStructuredMesh() const;
void writeLL(med_idt fid) const throw(INTERP_KERNEL::Exception);
MEDFileCMesh();
void synchronizeTinyInfoOnLeaves() const;
MEDFileCMesh(med_idt fid, const char *mName, int dt, int it) throw(INTERP_KERNEL::Exception);
void loadCMeshFromFile(med_idt fid, const char *mName, int dt, int it) throw(INTERP_KERNEL::Exception);
- void changeFamilyIdArr(int oldId, int newId) throw(INTERP_KERNEL::Exception);
private:
MEDCouplingAutoRefCountObjectPtr<MEDCouplingCMesh> _cmesh;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _fam_nodes;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _num_nodes;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _fam_cells;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _num_cells;
- mutable MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _rev_num_nodes;
- mutable MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _rev_num_cells;
+ };
+
+ class MEDLOADER_EXPORT MEDFileCurveLinearMesh : public MEDFileStructuredMesh
+ {
+ friend class MEDFileMesh;
+ public:
+ static MEDFileCurveLinearMesh *New();
+ static MEDFileCurveLinearMesh *New(const char *fileName) throw(INTERP_KERNEL::Exception);
+ static MEDFileCurveLinearMesh *New(const char *fileName, const char *mName, int dt=-1, int it=-1) throw(INTERP_KERNEL::Exception);
+ std::size_t getHeapMemorySize() const;
+ MEDFileMesh *deepCpy() const throw(INTERP_KERNEL::Exception);
+ MEDFileMesh *shallowCpy() const throw(INTERP_KERNEL::Exception);
+ bool isEqual(const MEDFileMesh *other, double eps, std::string& what) const;
+ int getMeshDimension() const throw(INTERP_KERNEL::Exception);
+ std::string simpleRepr() const;
+ std::string advancedRepr() const;
+ void clearNonDiscrAttributes() const;
+ const MEDCouplingCurveLinearMesh *getMesh() const;
+ void setMesh(MEDCouplingCurveLinearMesh *m) throw(INTERP_KERNEL::Exception);
+ private:
+ MEDFileCurveLinearMesh();
+ MEDFileCurveLinearMesh(med_idt fid, const char *mName, int dt, int it) throw(INTERP_KERNEL::Exception);
+ const MEDCouplingStructuredMesh *getStructuredMesh() const;
+ void synchronizeTinyInfoOnLeaves() const;
+ void writeLL(med_idt fid) const throw(INTERP_KERNEL::Exception);
+ void loadCLMeshFromFile(med_idt fid, const char *mName, int dt, int it) throw(INTERP_KERNEL::Exception);//to imp
+ private:
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingCurveLinearMesh> _clmesh;
};
class MEDLOADER_EXPORT MEDFileMeshMultiTS : public RefCountObject, public MEDFileWritable
static MEDFileMeshMultiTS *New();
static MEDFileMeshMultiTS *New(const char *fileName) throw(INTERP_KERNEL::Exception);
static MEDFileMeshMultiTS *New(const char *fileName, const char *mName) throw(INTERP_KERNEL::Exception);
+ MEDFileMeshMultiTS *deepCpy() const throw(INTERP_KERNEL::Exception);
+ std::size_t getHeapMemorySize() const;
const char *getName() const throw(INTERP_KERNEL::Exception);
void setName(const char *newMeshName) throw(INTERP_KERNEL::Exception);
bool changeNames(const std::vector< std::pair<std::string,std::string> >& modifTab) throw(INTERP_KERNEL::Exception);
public:
static MEDFileMeshes *New();
static MEDFileMeshes *New(const char *fileName) throw(INTERP_KERNEL::Exception);
+ MEDFileMeshes *deepCpy() const throw(INTERP_KERNEL::Exception);
+ std::size_t getHeapMemorySize() const;
std::string simpleRepr() const;
void simpleReprWithoutHeader(std::ostream& oss) const;
void write(const char *fileName, int mode) const throw(INTERP_KERNEL::Exception);
