return ret;
}
+/*!
+ * This method operates only on maps in \a this. The arrays are not considered here. So this method will remove a family (except "FAMILLE_ZERO" family) if no group lies on it whatever
+ * this family is orphan or not.
+ *
+ * \warning this method is different from removeOrphanFamilies that scans family field array to find orphan families.
+ */
+void MEDFileMesh::removeFamiliesReferedByNoGroups()
+{
+ std::map<std::string,int> fams;
+ std::set<std::string> sfams;
+ for(std::map<std::string,int>::const_iterator it=_families.begin();it!=_families.end();it++)
+ sfams.insert((*it).first);
+ for(std::map<std::string, std::vector<std::string> >::const_iterator it0=_groups.begin();it0!=_groups.end();it0++)
+ for(std::vector<std::string>::const_iterator it1=(*it0).second.begin();it1!=(*it0).second.end();it1++)
+ sfams.erase(*it1);
+ for(std::set<std::string>::const_iterator it=sfams.begin();it!=sfams.end();it++)
+ if(*it!=DFT_FAM_NAME)
+ _families.erase(*it);
+}
+
+/*!
+ * This method has no impact on groups. This method only works on families. This method firstly removes families not refered by any groups in \a this, then all unused entities
+ * are put as belonging to family 0 ("FAMILLE_ZERO"). Finally, all orphanFamilies are killed.
+ * This method raises an exception if "FAMILLE_ZERO" is already belonging to a group.
+ *
+ * \sa MEDFileMesh::removeOrphanFamilies
+ */
+void MEDFileMesh::rearrangeFamilies()
+{
+ checkOrphanFamilyZero();
+ removeFamiliesReferedByNoGroups();
+ //
+ std::vector<int> levels(getNonEmptyLevelsExt());
+ std::set<int> idsRefed;
+ for(std::map<std::string,int>::const_iterator it=_families.begin();it!=_families.end();it++)
+ idsRefed.insert((*it).second);
+ for(std::vector<int>::const_iterator it=levels.begin();it!=levels.end();it++)
+ {
+ const DataArrayInt *fams(0);
+ try
+ {
+ fams=getFamilyFieldAtLevel(*it);
+ }
+ catch(INTERP_KERNEL::Exception& e) { }
+ if(!fams)
+ continue;
+ std::vector<bool> v(fams->getNumberOfTuples(),false);
+ for(std::set<int>::const_iterator pt=idsRefed.begin();pt!=idsRefed.end();pt++)
+ fams->switchOnTupleEqualTo(*pt,v);
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> unfetchedIds(DataArrayInt::BuildListOfSwitchedOff(v));
+ if(!unfetchedIds->empty())
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newFams(fams->deepCpy());
+ newFams->setPartOfValuesSimple3(0,unfetchedIds->begin(),unfetchedIds->end(),0,1,1);
+ setFamilyFieldArr(*it,newFams);
+ }
+ }
+ removeOrphanFamilies();
+}
+
+/*!
+ * This method only checks that "FAMILLE_ZERO" is orphan (not belonging to a group).
+ */
+void MEDFileMesh::checkOrphanFamilyZero() const
+{
+ for(std::map<std::string, std::vector<std::string> >::const_iterator it=_groups.begin();it!=_groups.end();it++)
+ {
+ if(std::find((*it).second.begin(),(*it).second.end(),DFT_FAM_NAME)!=(*it).second.end())
+ {
+ std::ostringstream oss; oss << "MEDFileMesh::rearrangeFamilies : Groups \"" << (*it).first << "\" is lying on family \"" << DFT_FAM_NAME << "\" !";
+ throw INTERP_KERNEL::Exception(oss.str().c_str());
+ }
+ }
+}
+
/*!
* Renames a group in \a this mesh.
* \param [in] oldName - a current name of the group to rename.
if((const MEDFileUMeshSplitL1 *)(*it))
ret->_ms[i]=(*it)->deepCpy(ret->_coords);
}
+ if((const PartDefinition*)_part_coords)
+ ret->_part_coords=_part_coords->deepCpy();
return ret.retn();
}
return false;
}
}
- return true;
+ const PartDefinition *pd0(_part_coords),*pd1(otherC->_part_coords);
+ if(!pd0 && !pd1)
+ return true;
+ if((!pd0 && pd1) || (pd0 && !pd1))
+ {
+ what=std::string("node part def is defined only for one among this or other !");
+ return false;
+ }
+ return pd0->isEqual(pd1,what);
}
/*!
return coo->getNumberOfTuples();
}
+int MEDFileUMesh::getNumberOfCellsAtLevel(int meshDimRelToMaxExt) const
+{
+ const MEDFileUMeshSplitL1 *l1=getMeshAtLevSafe(meshDimRelToMaxExt);
+ return l1->getNumberOfCells();
+}
+
bool MEDFileUMesh::hasImplicitPart() const
{
return false;
throw INTERP_KERNEL::Exception("Dimension request is invalid (>1) !");
int tracucedRk=-meshDimRelToMaxExt;
if(tracucedRk>=(int)_ms.size())
- throw INTERP_KERNEL::Exception("Invalid mesh dim relative to max given ! To low !");
+ throw INTERP_KERNEL::Exception("Invalid mesh dim relative to max given ! Too low !");
if((const MEDFileUMeshSplitL1 *)_ms[tracucedRk]==0)
throw INTERP_KERNEL::Exception("On specified lev (or entity) no cells exists !");
return _ms[tracucedRk];
throw INTERP_KERNEL::Exception("Dimension request is invalid (>1) !");
int tracucedRk=-meshDimRelToMaxExt;
if(tracucedRk>=(int)_ms.size())
- throw INTERP_KERNEL::Exception("Invalid mesh dim relative to max given ! To low !");
+ throw INTERP_KERNEL::Exception("Invalid mesh dim relative to max given ! Too low !");
if((const MEDFileUMeshSplitL1 *)_ms[tracucedRk]==0)
throw INTERP_KERNEL::Exception("On specified lev (or entity) no cells exists !");
return _ms[tracucedRk];
return ret.retn();
}
+/*!
+ * This method performs an extrusion along a path defined by \a m1D.
+ * \a this is expected to be a mesh with max mesh dimension equal to 2.
+ * \a m1D is expected to be a mesh with space dimesion equal to 3 and mesh dimension equal to 1.
+ * Mesh dimensions of returned mesh is incremented by one compared to thoose in \a this.
+ * This method scans all levels in \a this
+ * and put them in the returned mesh. All groups in \a this are also put in the returned mesh.
+ *
+ * \param [in] m1D - the mesh defining the extrusion path.
+ * \param [in] policy - defines the policy of extrusion (see MEDCouplingUMesh::buildExtrudedMesh for more details)
+ * \return - a new reference on mesh (you have to deal with using decrRef). The returned mesh will have the same name than \a this.
+ *
+ * \sa MEDCouplingUMesh::buildExtrudedMesh
+ */
+MEDFileUMesh *MEDFileUMesh::buildExtrudedMesh(const MEDCouplingUMesh *m1D, int policy) const
+{
+ if(getMeshDimension()!=2)
+ throw INTERP_KERNEL::Exception("MEDFileUMesh::buildExtrudedMesh : this is expected to be with mesh dimension equal to 2 !");
+ MEDCouplingAutoRefCountObjectPtr<MEDFileUMesh> ret(MEDFileUMesh::New());
+ m1D->checkCoherency();
+ if(m1D->getMeshDimension()!=1)
+ throw INTERP_KERNEL::Exception("MEDFileUMesh::buildExtrudedMesh : input mesh must have a mesh dimension equal to one !");
+ int nbRep(m1D->getNumberOfCells());
+ std::vector<int> levs(getNonEmptyLevels());
+ std::vector<std::string> grps(getGroupsNames());
+ std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> > zeList;
+ DataArrayDouble *coords(0);
+ std::size_t nbOfLevsOut(levs.size()+1);
+ std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > o2ns(nbOfLevsOut);
+ for(std::vector<int>::const_iterator lev=levs.begin();lev!=levs.end();lev++)
+ {
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> item(getMeshAtLevel(*lev));
+ item=item->clone(false);
+ item->changeSpaceDimension(3+(*lev),0.);//no problem non const but change DataArrayDouble for coordinates do not alter data
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> tmp(static_cast<MEDCouplingUMesh *>(m1D->deepCpy()));
+ tmp->changeSpaceDimension(3+(*lev),0.);
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> elt(item->buildExtrudedMesh(tmp,policy));
+ zeList.push_back(elt);
+ if(*lev==0)
+ coords=elt->getCoords();
+ }
+ if(!coords)
+ throw INTERP_KERNEL::Exception("MEDFileUMesh::buildExtrudedMesh : internal error !");
+ for(std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> >::iterator it=zeList.begin();it!=zeList.end();it++)
+ {
+ (*it)->setName(getName());
+ (*it)->setCoords(coords);
+ }
+ for(std::size_t ii=0;ii!=zeList.size();ii++)
+ {
+ int lev(levs[ii]);
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> elt(zeList[ii]);
+ if(lev<=-1)
+ {
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> elt1(getMeshAtLevel(lev+1));
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> elt2(elt1->clone(false));
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp(elt2->getNodalConnectivity()->deepCpy());
+ elt2->setConnectivity(tmp,elt2->getNodalConnectivityIndex());
+ elt2->shiftNodeNumbersInConn(nbRep*elt1->getNumberOfNodes());
+ elt1->setCoords(elt->getCoords()); elt2->setCoords(elt->getCoords());
+ std::vector<const MEDCouplingUMesh *> elts(3);
+ elts[0]=elt; elts[1]=elt1; elts[2]=elt2;
+ elt=MEDCouplingUMesh::MergeUMeshesOnSameCoords(elts);
+ elt->setName(getName());
+ }
+ //
+ o2ns[ii]=elt->sortCellsInMEDFileFrmt();
+ ret->setMeshAtLevel(lev,elt);
+ }
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> endLev(getMeshAtLevel(levs.back())),endLev2;
+ endLev=endLev->clone(false); endLev->setCoords(coords);
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp(endLev->getNodalConnectivity()->deepCpy());
+ endLev2=endLev->clone(false); endLev2->setConnectivity(tmp,endLev->getNodalConnectivityIndex());
+ endLev2->shiftNodeNumbersInConn(nbRep*getNumberOfNodes());
+ endLev=MEDCouplingUMesh::MergeUMeshesOnSameCoords(endLev,endLev2);
+ o2ns[levs.size()]=endLev->sortCellsInMEDFileFrmt();
+ endLev->setName(getName());
+ ret->setMeshAtLevel(levs.back()-1,endLev);
+ //
+ for(std::size_t ii=0;ii!=zeList.size();ii++)
+ {
+ int lev(levs[ii]);
+ std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > outGrps;
+ std::vector< const DataArrayInt * > outGrps2;
+ if(lev<=-1)
+ {
+ for(std::vector<std::string>::const_iterator grp=grps.begin();grp!=grps.end();grp++)
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> grpArr(getGroupArr(lev+1,*grp));
+ if(!grpArr->empty())
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> grpArr1(grpArr->deepCpy()),grpArr2(grpArr->deepCpy());
+ int offset0(zeList[ii]->getNumberOfCells());
+ int offset1(offset0+getNumberOfCellsAtLevel(lev+1));
+ grpArr1->applyLin(1,offset0); grpArr2->applyLin(1,offset1);
+ std::ostringstream oss; oss << grpArr2->getName() << "_top";
+ grpArr2->setName(oss.str());
+ grpArr1->transformWithIndArr(o2ns[ii]->begin(),o2ns[ii]->end());
+ grpArr2->transformWithIndArr(o2ns[ii]->begin(),o2ns[ii]->end());
+ outGrps.push_back(grpArr1); outGrps.push_back(grpArr2);
+ outGrps2.push_back(grpArr1); outGrps2.push_back(grpArr2);
+ }
+ }
+ }
+ //
+ for(std::vector<std::string>::const_iterator grp=grps.begin();grp!=grps.end();grp++)
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> grpArr(getGroupArr(lev,*grp));
+ if(!grpArr->empty())
+ {
+ int nbCellsB4Extrusion(getNumberOfCellsAtLevel(lev));
+ std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > grpArrs(nbRep);
+ std::vector< const DataArrayInt *> grpArrs2(nbRep);
+ for(int iii=0;iii<nbRep;iii++)
+ {
+ grpArrs[iii]=grpArr->deepCpy(); grpArrs[iii]->applyLin(1,iii*nbCellsB4Extrusion);
+ grpArrs2[iii]=grpArrs[iii];
+ }
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> grpArrExt(DataArrayInt::Aggregate(grpArrs2));
+ grpArrExt->transformWithIndArr(o2ns[ii]->begin(),o2ns[ii]->end());
+ std::ostringstream grpName; grpName << *grp << "_extruded";
+ grpArrExt->setName(grpName.str());
+ outGrps.push_back(grpArrExt);
+ outGrps2.push_back(grpArrExt);
+ }
+ }
+ ret->setGroupsAtLevel(lev,outGrps2);
+ }
+ std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > outGrps;
+ std::vector< const DataArrayInt * > outGrps2;
+ for(std::vector<std::string>::const_iterator grp=grps.begin();grp!=grps.end();grp++)
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> grpArr1(getGroupArr(levs.back(),*grp));
+ if(grpArr1->empty())
+ continue;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> grpArr2(grpArr1->deepCpy());
+ std::ostringstream grpName; grpName << *grp << "_top";
+ grpArr2->setName(grpName.str());
+ grpArr2->applyLin(1,getNumberOfCellsAtLevel(levs.back()));
+ outGrps.push_back(grpArr1); outGrps.push_back(grpArr2);
+ outGrps2.push_back(grpArr1); outGrps2.push_back(grpArr2);
+ }
+ ret->setGroupsAtLevel(levs.back()-1,outGrps2);
+ return ret.retn();
+}
+
+/*!
+ * This method converts all linear cells in \a this into quadratic cells (following the \a conversionType policy).
+ * All the cells converted are put in the returned instance. This method applies all the groups and families in \a this to returned instance.
+ * Groups on nodes and families on nodes are copied directly to the returned instance without transformation.
+ *
+ * \param [in] conversionType - conversionType specifies the type of conversion expected. Only 0 (default) and 1 are supported presently. 0 those that creates the 'most' simple
+ * corresponding quadratic cells. 1 is those creating the 'most' complex.
+ * \param [in] eps - detection threshold for coordinates.
+ * \return A new instance that is the result of the conversion. The caller has the ownership of this returned instance.
+ *
+ * \sa MEDCouplingUMesh::convertLinearCellsToQuadratic , quadraticToLinear
+ */
+MEDFileUMesh *MEDFileUMesh::linearToQuadratic(int conversionType, double eps) const
+{
+ MEDCouplingAutoRefCountObjectPtr<MEDFileUMesh> ret(MEDFileUMesh::New());
+ int initialNbNodes(getNumberOfNodes());
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m0Tmp(getMeshAtLevel(0));
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m0(dynamic_cast<MEDCouplingUMesh *>(m0Tmp->deepCpy()));
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> notUsed(m0->convertLinearCellsToQuadratic(conversionType));
+ }
+ DataArrayDouble *zeCoords(m0->getCoords());
+ ret->setMeshAtLevel(0,m0);
+ std::vector<int> levs(getNonEmptyLevels());
+ const DataArrayInt *famField(getFamilyFieldAtLevel(0));
+ if(famField)
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> famFieldCpy(famField->deepCpy());
+ ret->setFamilyFieldArr(0,famFieldCpy);
+ }
+ famField=getFamilyFieldAtLevel(1);
+ if(famField)
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> fam(DataArrayInt::New()); fam->alloc(zeCoords->getNumberOfTuples(),1);
+ fam->fillWithZero();
+ fam->setPartOfValues1(famField,0,initialNbNodes,1,0,1,1);
+ ret->setFamilyFieldArr(1,fam);
+ }
+ ret->copyFamGrpMapsFrom(*this);
+ MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> partZeCoords(zeCoords->selectByTupleId2(initialNbNodes,zeCoords->getNumberOfTuples(),1));
+ for(std::vector<int>::const_iterator lev=levs.begin();lev!=levs.end();lev++)
+ {
+ if(*lev==0)
+ continue;
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m1Tmp(getMeshAtLevel(*lev));
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m1(dynamic_cast<MEDCouplingUMesh *>(m1Tmp->deepCpy()));
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> notUsed(m1->convertLinearCellsToQuadratic(conversionType));
+ }
+ MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> m1Coords(m1->getCoords()->selectByTupleId2(initialNbNodes,m1->getNumberOfNodes(),1));
+ DataArrayInt *b(0);
+ bool a(partZeCoords->areIncludedInMe(m1Coords,eps,b));
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> bSafe(b);
+ if(!a)
+ {
+ std::ostringstream oss; oss << "MEDFileUMesh::linearCellsToQuadratic : for level " << *lev << " problem to identify nodes generated !";
+ throw INTERP_KERNEL::Exception(oss.str().c_str());
+ }
+ b->applyLin(1,initialNbNodes);
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> l0(DataArrayInt::New()); l0->alloc(initialNbNodes,1); l0->iota();
+ std::vector<const DataArrayInt *> v(2); v[0]=l0; v[1]=b;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> renum(DataArrayInt::Aggregate(v));
+ m1->renumberNodesInConn(renum->begin());
+ m1->setCoords(zeCoords);
+ ret->setMeshAtLevel(*lev,m1);
+ famField=getFamilyFieldAtLevel(*lev);
+ if(famField)
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> famFieldCpy(famField->deepCpy());
+ ret->setFamilyFieldArr(*lev,famFieldCpy);
+ }
+ }
+ return ret.retn();
+}
+
+/*!
+ * This method converts all quadratic cells in \a this into linear cells.
+ * All the cells converted are put in the returned instance. This method applies all the groups and families in \a this to returned instance.
+ * Groups on nodes and families on nodes are copied directly to the returned instance without transformation.
+ *
+ * \param [in] eps - detection threshold for coordinates.
+ * \return A new instance that is the result of the conversion. The caller has the ownership of this returned instance.
+ *
+ * \sa MEDCouplingUMesh::convertLinearCellsToQuadratic , linearToQuadratic
+ */
+MEDFileUMesh *MEDFileUMesh::quadraticToLinear(double eps) const
+{
+ MEDCouplingAutoRefCountObjectPtr<MEDFileUMesh> ret(MEDFileUMesh::New());
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m0Tmp(getMeshAtLevel(0));
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m0(dynamic_cast<MEDCouplingUMesh *>(m0Tmp->deepCpy()));
+ m0->convertQuadraticCellsToLinear();
+ m0->zipCoords();
+ DataArrayDouble *zeCoords(m0->getCoords());
+ ret->setMeshAtLevel(0,m0);
+ std::vector<int> levs(getNonEmptyLevels());
+ const DataArrayInt *famField(getFamilyFieldAtLevel(0));
+ if(famField)
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> famFieldCpy(famField->deepCpy());
+ ret->setFamilyFieldArr(0,famFieldCpy);
+ }
+ famField=getFamilyFieldAtLevel(1);
+ if(famField)
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> fam(famField->selectByTupleId2(0,zeCoords->getNumberOfTuples(),1));
+ ret->setFamilyFieldArr(1,fam);
+ }
+ ret->copyFamGrpMapsFrom(*this);
+ for(std::vector<int>::const_iterator lev=levs.begin();lev!=levs.end();lev++)
+ {
+ if(*lev==0)
+ continue;
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m1Tmp(getMeshAtLevel(*lev));
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m1(dynamic_cast<MEDCouplingUMesh *>(m1Tmp->deepCpy()));
+ m1->convertQuadraticCellsToLinear();
+ m1->zipCoords();
+ DataArrayInt *b(0);
+ bool a(zeCoords->areIncludedInMe(m1->getCoords(),eps,b));
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> bSafe(b);
+ if(!a)
+ {
+ std::ostringstream oss; oss << "MEDFileUMesh::quadraticToLinear : for level " << *lev << " problem to identify nodes generated !";
+ throw INTERP_KERNEL::Exception(oss.str().c_str());
+ }
+ m1->renumberNodesInConn(b->begin());
+ m1->setCoords(zeCoords);
+ ret->setMeshAtLevel(*lev,m1);
+ famField=getFamilyFieldAtLevel(*lev);
+ if(famField)
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> famFieldCpy(famField->deepCpy());
+ ret->setFamilyFieldArr(*lev,famFieldCpy);
+ }
+ }
+ return ret.retn();
+}
+
+void MEDFileUMesh::serialize(std::vector<double>& tinyDouble, std::vector<int>& tinyInt, std::vector<std::string>& tinyStr, std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> >& bigArraysI, MEDCouplingAutoRefCountObjectPtr<DataArrayDouble>& bigArrayD)
+{
+ clearNonDiscrAttributes();
+ forceComputationOfParts();
+ tinyDouble.clear(); tinyInt.clear(); tinyStr.clear(); bigArraysI.clear(); bigArrayD=0;
+ std::vector<int> layer0;
+ layer0.push_back(_order); //0 i
+ layer0.push_back(_iteration);//1 i
+ layer0.push_back(getSpaceDimension());//2 i
+ tinyDouble.push_back(_time);//0 d
+ tinyStr.push_back(_name);//0 s
+ tinyStr.push_back(_desc_name);//1 s
+ for(int i=0;i<getSpaceDimension();i++)
+ tinyStr.push_back(_coords->getInfoOnComponent(i));
+ layer0.push_back((int)_families.size());//3 i <- key info aa layer#0
+ for(std::map<std::string,int>::const_iterator it=_families.begin();it!=_families.end();it++)
+ {
+ tinyStr.push_back((*it).first);
+ layer0.push_back((*it).second);
+ }
+ layer0.push_back((int)_groups.size());//3+aa i <- key info bb layer#0
+ for(std::map<std::string, std::vector<std::string> >::const_iterator it0=_groups.begin();it0!=_groups.end();it0++)
+ {
+ layer0.push_back((int)(*it0).second.size());
+ tinyStr.push_back((*it0).first);
+ for(std::vector<std::string>::const_iterator it1=((*it0).second).begin();it1!=((*it0).second).end();it1++)
+ tinyStr.push_back(*it1);
+ }
+ // sizeof(layer0)==3+aa+1+bb layer#0
+ bigArrayD=_coords;// 0 bd
+ bigArraysI.push_back(_fam_coords);// 0 bi
+ bigArraysI.push_back(_num_coords);// 1 bi
+ const PartDefinition *pd(_part_coords);
+ if(!pd)
+ layer0.push_back(-1);
+ else
+ {
+ std::vector<int> tmp0;
+ pd->serialize(tmp0,bigArraysI);
+ tinyInt.push_back(tmp0.size());
+ tinyInt.insert(tinyInt.end(),tmp0.begin(),tmp0.end());
+ }
+ //
+ std::vector<int> layer1;
+ std::vector<int> levs(getNonEmptyLevels());
+ layer1.push_back((int)levs.size());// 0 i <- key
+ layer1.insert(layer1.end(),levs.begin(),levs.end());
+ for(std::vector<int>::const_iterator it=levs.begin();it!=levs.end();it++)
+ {
+ const MEDFileUMeshSplitL1 *lev(getMeshAtLevSafe(*it));
+ lev->serialize(layer1,bigArraysI);
+ }
+ // put layers all together.
+ tinyInt.push_back(layer0.size());
+ tinyInt.insert(tinyInt.end(),layer0.begin(),layer0.end());
+ tinyInt.push_back(layer1.size());
+ tinyInt.insert(tinyInt.end(),layer1.begin(),layer1.end());
+}
+
+void MEDFileUMesh::unserialize(std::vector<double>& tinyDouble, std::vector<int>& tinyInt, std::vector<std::string>& tinyStr,
+ std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> >& bigArraysI, MEDCouplingAutoRefCountObjectPtr<DataArrayDouble>& bigArrayD)
+{
+ int sz0(tinyInt[0]);
+ std::vector<int> layer0(tinyInt.begin()+1,tinyInt.begin()+1+sz0);
+ int sz1(tinyInt[sz0+1]);
+ std::vector<int> layer1(tinyInt.begin()+2+sz0,tinyInt.begin()+2+sz0+sz1);
+ //
+ std::reverse(layer0.begin(),layer0.end());
+ std::reverse(layer1.begin(),layer1.end());
+ std::reverse(tinyDouble.begin(),tinyDouble.end());
+ std::reverse(tinyStr.begin(),tinyStr.end());
+ std::reverse(bigArraysI.begin(),bigArraysI.end());
+ //
+ _order=layer0.back(); layer0.pop_back();
+ _iteration=layer0.back(); layer0.pop_back();
+ int spaceDim(layer0.back()); layer0.pop_back();
+ _time=tinyDouble.back(); tinyDouble.pop_back();
+ _name=tinyStr.back(); tinyStr.pop_back();
+ _desc_name=tinyStr.back(); tinyStr.pop_back();
+ _coords=bigArrayD; _coords->rearrange(spaceDim);
+ for(int i=0;i<spaceDim;i++)
+ {
+ _coords->setInfoOnComponent(i,tinyStr.back());
+ tinyStr.pop_back();
+ }
+ int nbOfFams(layer0.back()); layer0.pop_back();
+ _families.clear();
+ for(int i=0;i<nbOfFams;i++)
+ {
+ _families[tinyStr.back()]=layer0.back();
+ tinyStr.pop_back(); layer0.pop_back();
+ }
+ int nbGroups(layer0.back()); layer0.pop_back();
+ _groups.clear();
+ for(int i=0;i<nbGroups;i++)
+ {
+ std::string grpName(tinyStr.back()); tinyStr.pop_back();
+ int nbOfFamsOnGrp(layer0.back()); layer0.pop_back();
+ std::vector<std::string> fams(nbOfFamsOnGrp);
+ for(int j=0;j<nbOfFamsOnGrp;j++)
+ {
+ fams[j]=tinyStr.back(); tinyStr.pop_back();
+ }
+ _groups[grpName]=fams;
+ }
+ _fam_coords=bigArraysI.back(); bigArraysI.pop_back();
+ _num_coords=bigArraysI.back(); bigArraysI.pop_back();
+ _part_coords=0;
+ int isPd(layer0.back()); layer0.pop_back();
+ if(isPd!=-1)
+ {
+ std::vector<int> tmp0(layer0.begin(),layer0.begin()+isPd);
+ layer0.erase(layer0.begin(),layer0.begin()+isPd);
+ _part_coords=PartDefinition::Unserialize(tmp0,bigArraysI);
+ }
+ if(!layer0.empty())
+ throw INTERP_KERNEL::Exception("MEDFileUMesh::unserialize : something wrong during unserialization #1 !");
+ //
+ int nbLevs(layer1.back()); layer1.pop_back();
+ std::vector<int> levs(layer1.rbegin(),layer1.rbegin()+nbLevs); layer1.erase(layer1.end()-nbLevs,layer1.end());
+ _ms.clear();
+ int maxLev(-(*std::min_element(levs.begin(),levs.end())));
+ _ms.resize(maxLev+1);
+ for(int i=0;i<nbLevs;i++)
+ {
+ int lev(levs[i]);
+ int pos(-lev);
+ _ms[pos]=MEDFileUMeshSplitL1::Unserialize(_name,_coords,layer1,bigArraysI);
+ }
+}
+
/*!
* Adds a group of nodes to \a this mesh.
* \param [in] ids - a DataArrayInt providing ids and a name of the group to add.
* The ids should be sorted and different each other (MED file norm).
+ *
+ * \warning this method can alter default "FAMILLE_ZERO" family.
+ * For users sensitive to this a call to MEDFileMesh::rearrangeFamilies will be necessary after addGroup session.
+ *
* \throw If the node coordinates array is not set.
* \throw If \a ids == \c NULL.
* \throw If \a ids->getName() == "".
/*!
* Adds a group of nodes/cells/faces/edges to \a this mesh.
+ *
* \param [in] ids - a DataArrayInt providing ids and a name of the group to add.
* The ids should be sorted and different each other (MED file norm).
+ *
+ * \warning this method can alter default "FAMILLE_ZERO" family.
+ * For users sensitive to this a call to MEDFileMesh::rearrangeFamilies will be necessary after addGroup session.
+ *
* \throw If the node coordinates array is not set.
* \throw If \a ids == \c NULL.
* \throw If \a ids->getName() == "".
throw INTERP_KERNEL::Exception("MEDFileUMesh::setFamilyFieldArr : Dimension request is invalid (>1) !");
int traducedRk=-meshDimRelToMaxExt;
if(traducedRk>=(int)_ms.size())
- throw INTERP_KERNEL::Exception("Invalid mesh dim relative to max given ! To low !");
+ throw INTERP_KERNEL::Exception("Invalid mesh dim relative to max given ! Too low !");
if((MEDFileUMeshSplitL1 *)_ms[traducedRk]==0)
throw INTERP_KERNEL::Exception("On specified lev (or entity) no cells exists !");
return _ms[traducedRk]->setFamilyArr(famArr);
throw INTERP_KERNEL::Exception("MEDFileUMesh::setRenumArr : Dimension request is invalid (>1) !");
int traducedRk=-meshDimRelToMaxExt;
if(traducedRk>=(int)_ms.size())
- throw INTERP_KERNEL::Exception("Invalid mesh dim relative to max given ! To low !");
+ throw INTERP_KERNEL::Exception("Invalid mesh dim relative to max given ! Too low !");
if((MEDFileUMeshSplitL1 *)_ms[traducedRk]==0)
throw INTERP_KERNEL::Exception("On specified lev (or entity) no cells exists !");
return _ms[traducedRk]->setRenumArr(renumArr);
throw INTERP_KERNEL::Exception("MEDFileUMesh::setNameFieldAtLevel : Dimension request is invalid (>1) !");
int traducedRk=-meshDimRelToMaxExt;
if(traducedRk>=(int)_ms.size())
- throw INTERP_KERNEL::Exception("Invalid mesh dim relative to max given ! To low !");
+ throw INTERP_KERNEL::Exception("Invalid mesh dim relative to max given ! Too low !");
if((MEDFileUMeshSplitL1 *)_ms[traducedRk]==0)
throw INTERP_KERNEL::Exception("On specified lev (or entity) no cells exists !");
return _ms[traducedRk]->setNameArr(nameArr);
