-// Copyright (C) 2007-2013 CEA/DEN, EDF R&D
+// Copyright (C) 2007-2014 CEA/DEN, EDF R&D
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
-// version 2.1 of the License.
+// version 2.1 of the License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
using namespace ParaMEDMEM;
const unsigned char MEDMeshMultiLev::PARAMEDMEM_2_VTKTYPE[MEDMeshMultiLev::PARAMEDMEM_2_VTKTYPE_LGTH]=
- {1,3,21,5,9,7,22,34,23,28,255,255,255,255,10,14,13,255,12,255,24,255,16,27,255,26,255,29,255,255,25,42,36,4};
+{1,3,21,5,9,7,22,34,23,28,255,255,255,255,10,14,13,255,12,255,24,255,16,27,255,26,255,29,255,255,25,42,36,4};
+
+const unsigned char MEDMeshMultiLev::HEXA27_PERM_ARRAY[27]={0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,24,22,21,23,20,25,26};
const char MEDFileField1TSStructItem2::NEWLY_CREATED_PFL_NAME[]="???";
return ret;
}
-std::vector<const BigMemoryObject *> MEDFileMeshStruct::getDirectChildren() const
+std::vector<const BigMemoryObject *> MEDFileMeshStruct::getDirectChildrenWithNull() const
{
return std::vector<const BigMemoryObject *>();
}
MEDFileMeshStruct::MEDFileMeshStruct(const MEDFileMesh *mesh):_mesh(mesh)
{
- std::vector<int> levs=mesh->getNonEmptyLevels();
+ std::vector<int> levs(mesh->getNonEmptyLevels());
_name=mesh->getName();
_nb_nodes=mesh->getNumberOfNodes();
- _geo_types_distrib.resize(levs.size());
- for(std::vector<int>::const_iterator lev=levs.begin();lev!=levs.end();lev++)
- _geo_types_distrib[-(*lev)]=mesh->getDistributionOfTypes(*lev);
+ if(!levs.empty())
+ {
+ _geo_types_distrib.resize(-(*std::min_element(levs.begin(),levs.end()))+1);
+ for(std::vector<int>::const_iterator lev=levs.begin();lev!=levs.end();lev++)
+ _geo_types_distrib[-(*lev)]=mesh->getDistributionOfTypes(*lev);
+ }
}
int MEDFileMeshStruct::getLevelOfGeoType(INTERP_KERNEL::NormalizedCellType t) const
throw INTERP_KERNEL::Exception("MEDFileMeshStruct::getLevelOfGeoType : The specified geometric type is not present in the mesh structure !");
}
+/*!
+ * \sa MEDFileMeshStruct::doesManageGeoType
+ */
int MEDFileMeshStruct::getNumberOfElemsOfGeoType(INTERP_KERNEL::NormalizedCellType t) const
{
for(std::vector< std::vector<int> >::const_iterator it1=_geo_types_distrib.begin();it1!=_geo_types_distrib.end();it1++)
throw INTERP_KERNEL::Exception("The specified geometric type is not present in the mesh structure !");
}
+/*!
+ * \sa MEDFileMeshStruct::getNumberOfElemsOfGeoType
+ */
+bool MEDFileMeshStruct::doesManageGeoType(INTERP_KERNEL::NormalizedCellType t) const
+{
+ for(std::vector< std::vector<int> >::const_iterator it1=_geo_types_distrib.begin();it1!=_geo_types_distrib.end();it1++)
+ {
+ std::size_t sz=(*it1).size();
+ if(sz%3!=0)
+ throw INTERP_KERNEL::Exception("MEDFileMeshStruct::doesManageGeoType : internal error in code !");
+ std::size_t nbGeo=sz/3;
+ for(std::size_t i=0;i<nbGeo;i++)
+ if((*it1)[3*i]==(int)t)
+ return true;
+ }
+ return false;
+}
+
+void MEDFileMeshStruct::appendIfImplicitType(INTERP_KERNEL::NormalizedCellType t)
+{
+ if(!_mesh->hasImplicitPart())
+ throw INTERP_KERNEL::Exception("MEDFileMeshStruct::appendIfImplicitType : by default no implicit geo type can be appended !");
+ static const char MSG[]="MEDFileMeshStruct::appendIfImplicitType : the distribution does not looks like structured standard !";
+ if(_geo_types_distrib.size()!=1)
+ throw INTERP_KERNEL::Exception(MSG);
+ std::size_t sz(_geo_types_distrib[0].size());
+ if(sz%3!=0)
+ throw INTERP_KERNEL::Exception("MEDFileMeshStruct::appendIfImplicitType : internal error in code !");
+ std::size_t nbGeo(sz/3);
+ if(nbGeo!=1)
+ throw INTERP_KERNEL::Exception(MSG);
+ std::vector<int> arr(3); arr[0]=(int)t; arr[1]=_mesh->buildImplicitPartIfAny(t); arr[2]=-1;
+ _geo_types_distrib.push_back(arr);
+}
+
+
int MEDFileMeshStruct::getNumberOfLevs() const
{
return (int)_geo_types_distrib.size();
return 0;
}
-std::vector<const BigMemoryObject *> MEDMeshMultiLev::getDirectChildren() const
+std::vector<const BigMemoryObject *> MEDMeshMultiLev::getDirectChildrenWithNull() const
{
return std::vector<const BigMemoryObject *>();
}
MEDMeshMultiLev *MEDMeshMultiLev::NewOnlyOnNode(const MEDFileMesh *m, const DataArrayInt *pflOnNode)
{
- std::vector<int> levs(1,0);
- MEDCouplingAutoRefCountObjectPtr<MEDMeshMultiLev> ret(MEDMeshMultiLev::New(m,levs));
+ MEDCouplingAutoRefCountObjectPtr<MEDMeshMultiLev> ret(MEDMeshMultiLev::New(m,m->getNonEmptyLevels()));
ret->selectPartOfNodes(pflOnNode);
return ret.retn();
}
_node_reduction=const_cast<DataArrayInt*>(nr);
}
+void MEDMeshMultiLev::setCellReduction(const DataArrayInt *cr)
+{
+ if(_pfls.size()!=1)
+ throw INTERP_KERNEL::Exception("MEDMeshMultiLev::setCellReduction : can be used only for single geo type mesh !");
+ _pfls[0]=const_cast<DataArrayInt*>(cr);
+ if(cr)
+ cr->incrRef();
+}
+
bool MEDMeshMultiLev::isFastlyTheSameStruct(const MEDFileField1TSStructItem& fst, const MEDFileFieldGlobsReal *globs) const
{
if(fst.getType()==ON_NODES)
const DataArrayInt *nr(_node_reduction);
if(pflName.empty() && !nr)
return true;
+ if(!pflName.empty() && !nr)
+ return false;
if(pflName==nr->getName())
return true;
return false;
presenceOfPfls=true;
}
if(!presenceOfPfls)
- { famIds=const_cast<DataArrayInt *>(fids); famIds->incrRef(); isWithoutCopy=_cell_fam_ids_nocpy; return ; }
+ { famIds=const_cast<DataArrayInt *>(fids); famIds->incrRef(); isWithoutCopy=_mesh->isObjectInTheProgeny(famIds); return ; }
//bad luck the slowest part
isWithoutCopy=false;
std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > retSafe(sz);
presenceOfPfls=true;
}
if(!presenceOfPfls)
- { numIds=const_cast<DataArrayInt *>(nids); numIds->incrRef(); isWithoutCopy=_cell_num_ids_nocpy; return ; }
+ { numIds=const_cast<DataArrayInt *>(nids); numIds->incrRef(); isWithoutCopy=_mesh->isObjectInTheProgeny(numIds); return ; }
//bad luck the slowest part
isWithoutCopy=false;
std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > retSafe(sz);
numIds=DataArrayInt::Aggregate(ret);
}
-void MEDMeshMultiLev::setFamilyIdsOnCells(DataArrayInt *famIds, bool isNoCopy)
+/*!
+ * \param [out] famIds - Can be null. If not null the instance has to be dealt by the caller (decrRef).
+ * \param [out] isWithoutCopy - When true the returned instance \a famIds if not null is directly those in the data structure.
+ */
+void MEDMeshMultiLev::retrieveFamilyIdsOnNodes(DataArrayInt *& famIds, bool& isWithoutCopy) const
+{
+ const DataArrayInt *fids(_node_fam_ids);
+ if(!fids)
+ { famIds=0; isWithoutCopy=true; return ; }
+ const DataArrayInt *nr(_node_reduction);
+ if(nr)
+ {
+ isWithoutCopy=false;
+ famIds=fids->selectByTupleIdSafe(nr->begin(),nr->end());
+ }
+ else
+ {
+ famIds=const_cast<DataArrayInt *>(fids); famIds->incrRef();
+ isWithoutCopy=_mesh->isObjectInTheProgeny(famIds);
+ }
+}
+
+/*!
+ * \param [out] numIds - Can be null. If not null the instance has to be dealt by the caller (decrRef).
+ * \param [out] isWithoutCopy - When true the returned instance \a numIds if not null is directly those in the data structure.
+ */
+void MEDMeshMultiLev::retrieveNumberIdsOnNodes(DataArrayInt *& numIds, bool& isWithoutCopy) const
+{
+ const DataArrayInt *fids(_node_num_ids);
+ if(!fids)
+ { numIds=0; isWithoutCopy=true; return ; }
+ const DataArrayInt *nr(_node_reduction);
+ if(nr)
+ {
+ isWithoutCopy=false;
+ numIds=fids->selectByTupleIdSafe(nr->begin(),nr->end());
+ }
+ else
+ {
+ numIds=const_cast<DataArrayInt *>(fids); numIds->incrRef();
+ isWithoutCopy=_mesh->isObjectInTheProgeny(numIds);
+ }
+}
+
+std::vector< INTERP_KERNEL::NormalizedCellType > MEDMeshMultiLev::getGeoTypes() const
+{
+ return _geo_types;
+}
+
+void MEDMeshMultiLev::setFamilyIdsOnCells(DataArrayInt *famIds)
{
_cell_fam_ids=famIds;
if(famIds)
famIds->incrRef();
- _cell_fam_ids_nocpy=isNoCopy;
}
-void MEDMeshMultiLev::setNumberIdsOnCells(DataArrayInt *numIds, bool isNoCopy)
+void MEDMeshMultiLev::setNumberIdsOnCells(DataArrayInt *numIds)
{
_cell_num_ids=numIds;
if(numIds)
numIds->incrRef();
- _cell_num_ids_nocpy=isNoCopy;
+}
+
+void MEDMeshMultiLev::setFamilyIdsOnNodes(DataArrayInt *famIds)
+{
+ _node_fam_ids=famIds;
+ if(famIds)
+ famIds->incrRef();
+}
+
+void MEDMeshMultiLev::setNumberIdsOnNodes(DataArrayInt *numIds)
+{
+ _node_num_ids=numIds;
+ if(numIds)
+ numIds->incrRef();
}
std::string MEDMeshMultiLev::getPflNameOfId(int id) const
std::size_t sz(_nb_entities.size());
for(std::size_t i=0;i<sz;i++)
if(_geo_types[i]==t)
- return _nb_entities[i];
+ return _nb_entities[i];
throw INTERP_KERNEL::Exception("MEDMeshMultiLev::getNumberOfCells : not existing geometric type in this !");
}
if(pflName.empty() && !nr)
return vals->deepCpy();
if(pflName.empty() && nr)
- throw INTERP_KERNEL::Exception("MEDMeshMultiLev::constructDataArray : unexpected situation for nodes 2 !");
+ throw INTERP_KERNEL::Exception("MEDMeshMultiLev::constructDataArray : unexpected situation for nodes 2 !");
if(!pflName.empty() && nr)
{
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> p1(globs->getProfile(pflName.c_str())->deepCpy());
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> p2(nr->deepCpy());
p1->sort(true); p2->sort(true);
if(!p1->isEqualWithoutConsideringStr(*p2))
- throw INTERP_KERNEL::Exception("MEDMeshMultiLev::constructDataArray : unexpected situation for nodes 3 !");
+ throw INTERP_KERNEL::Exception("MEDMeshMultiLev::constructDataArray : it appears that a profile on nodes does not cover the cells correctly !");
p1=DataArrayInt::FindPermutationFromFirstToSecond(globs->getProfile(pflName.c_str()),nr);
MEDCouplingAutoRefCountObjectPtr<DataArray> ret(vals->deepCpy());
ret->renumberInPlace(p1->begin());
}
}
-MEDMeshMultiLev::MEDMeshMultiLev():_nb_nodes(0),_cell_fam_ids_nocpy(false)
+/*!
+ * This method is called to add NORM_POINT1 cells in \a this so that orphan nodes in \a verticesToAdd will be fetched.
+ */
+void MEDMeshMultiLev::appendVertices(const DataArrayInt *verticesToAdd, DataArrayInt *nr)
+{
+ int nbOfVertices(verticesToAdd->getNumberOfTuples());
+ std::size_t sz(_pfls.size());
+ _pfls.resize(sz+1);
+ _geo_types.resize(sz+1,INTERP_KERNEL::NORM_POINT1);
+ _nb_entities.resize(sz+1,nbOfVertices);
+ _node_reduction=nr; nr->incrRef();
+ _nb_nodes+=nbOfVertices;
+ const DataArrayInt *cf(_cell_fam_ids),*cn(_cell_num_ids),*nf(_node_fam_ids),*nn(_node_num_ids);
+ if(cf)
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp;
+ std::vector<const DataArrayInt *> a(2);
+ a[0]=cf;
+ if(nf)
+ tmp=nf->selectByTupleIdSafe(verticesToAdd->begin(),verticesToAdd->end());
+ else
+ {
+ tmp=DataArrayInt::New(); tmp->alloc(nbOfVertices,1); tmp->fillWithZero();
+ }
+ a[1]=tmp;
+ _cell_fam_ids=DataArrayInt::Aggregate(a);
+ }
+ if(cn)
+ {
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp;
+ std::vector<const DataArrayInt *> a(2);
+ a[0]=cn;
+ if(nn)
+ tmp=nn->selectByTupleIdSafe(verticesToAdd->begin(),verticesToAdd->end());
+ else
+ {
+ tmp=DataArrayInt::New(); tmp->alloc(nbOfVertices,1); tmp->fillWithZero();
+ }
+ a[1]=tmp;
+ _cell_num_ids=DataArrayInt::Aggregate(a);
+ }
+}
+
+MEDMeshMultiLev::MEDMeshMultiLev(const MEDFileMesh *mesh):_mesh(mesh),_nb_nodes(0)
{
}
-MEDMeshMultiLev::MEDMeshMultiLev(int nbNodes, const std::vector<INTERP_KERNEL::NormalizedCellType>& gts, const std::vector<const DataArrayInt *>& pfls, const std::vector<int>& nbEntities):_geo_types(gts),_nb_entities(nbEntities),_nb_nodes(nbNodes),_cell_fam_ids_nocpy(false),_cell_num_ids_nocpy(false)
+MEDMeshMultiLev::MEDMeshMultiLev(const MEDFileMesh *mesh, int nbNodes, const std::vector<INTERP_KERNEL::NormalizedCellType>& gts, const std::vector<const DataArrayInt *>& pfls, const std::vector<int>& nbEntities):_mesh(mesh),_geo_types(gts),_nb_entities(nbEntities),_nb_nodes(nbNodes)
{
std::size_t sz(_geo_types.size());
if(sz!=pfls.size() || sz!=nbEntities.size())
}
}
-MEDMeshMultiLev::MEDMeshMultiLev(const MEDMeshMultiLev& other):RefCountObject(other),_pfls(other._pfls),_geo_types(other._geo_types),_nb_entities(other._nb_entities),_node_reduction(other._node_reduction),_nb_nodes(other._nb_nodes),_cell_fam_ids(other._cell_fam_ids),_cell_fam_ids_nocpy(other._cell_fam_ids_nocpy),_cell_num_ids(other._cell_num_ids),_cell_num_ids_nocpy(other._cell_num_ids_nocpy)
+MEDMeshMultiLev::MEDMeshMultiLev(const MEDMeshMultiLev& other):RefCountObject(other),_mesh(other._mesh),_pfls(other._pfls),_geo_types(other._geo_types),_nb_entities(other._nb_entities),_node_reduction(other._node_reduction),_nb_nodes(other._nb_nodes),_cell_fam_ids(other._cell_fam_ids),_cell_num_ids(other._cell_num_ids),_node_fam_ids(other._node_fam_ids),_node_num_ids(other._node_num_ids)
{
}
return new MEDUMeshMultiLev(m,levs);
}
-MEDUMeshMultiLev::MEDUMeshMultiLev(const MEDFileUMesh *m, const std::vector<int>& levs)
+MEDUMeshMultiLev::MEDUMeshMultiLev(const MEDFileUMesh *m, const std::vector<int>& levs):MEDMeshMultiLev(m)
{
if(!m)
throw INTERP_KERNEL::Exception("MEDUMeshMultiLev constructor : null input pointer !");
v.insert(v.end(),vTmp.begin(),vTmp.end());
}
std::size_t sz(v.size());
+ if(v.empty())
+ {
+ _coords=m->getCoords(); _coords->incrRef();
+ }
_parts.resize(sz);
_pfls.resize(sz);
_geo_types.resize(sz);
_nb_entities[i]=obj->getNumberOfCells();
}
// ids fields management
- _cell_fam_ids_nocpy=(levs.size()==1);
- if(_cell_fam_ids_nocpy)
+ bool cellFamIdsNoCpy(levs.size()==1);
+ if(cellFamIdsNoCpy)
{
const DataArrayInt *tmp(m->getFamilyFieldAtLevel(levs[0]));
if(tmp)
if(!tmps[i])
f=false;
}
- if(f)
+ if(f && !tmps.empty())
_cell_fam_ids=DataArrayInt::Aggregate(tmps);
}
- _cell_num_ids_nocpy=(levs.size()==1);
- if(_cell_num_ids_nocpy)
+ bool cellNumIdsNoCpy(levs.size()==1);
+ if(cellNumIdsNoCpy)
{
const DataArrayInt *tmp(m->getNumberFieldAtLevel(levs[0]));
if(tmp)
if(!tmps[i])
n=false;
}
- if(n)
+ if(n && !tmps.empty())
_cell_num_ids=DataArrayInt::Aggregate(tmps);
}
+ // node part
+ {
+ const DataArrayInt *tmp(m->getFamilyFieldAtLevel(1));
+ if(tmp)
+ {
+ tmp->incrRef();
+ _node_fam_ids=(const_cast<DataArrayInt *>(tmp));
+ }
+ }
+ {
+ const DataArrayInt *tmp(m->getNumberFieldAtLevel(1));
+ if(tmp)
+ {
+ tmp->incrRef();
+ _node_num_ids=(const_cast<DataArrayInt *>(tmp));
+ }
+ }
}
MEDUMeshMultiLev *MEDUMeshMultiLev::New(const MEDFileUMesh *m, const std::vector<INTERP_KERNEL::NormalizedCellType>& gts, const std::vector<const DataArrayInt *>& pfls, const std::vector<int>& nbEntities)
return new MEDUMeshMultiLev(m,gts,pfls,nbEntities);
}
-MEDUMeshMultiLev::MEDUMeshMultiLev(const MEDFileUMesh *m, const std::vector<INTERP_KERNEL::NormalizedCellType>& gts, const std::vector<const DataArrayInt *>& pfls, const std::vector<int>& nbEntities):MEDMeshMultiLev(m->getNumberOfNodes(),gts,pfls,nbEntities)
+MEDUMeshMultiLev::MEDUMeshMultiLev(const MEDFileUMesh *m, const std::vector<INTERP_KERNEL::NormalizedCellType>& gts, const std::vector<const DataArrayInt *>& pfls, const std::vector<int>& nbEntities):MEDMeshMultiLev(m,m->getNumberOfNodes(),gts,pfls,nbEntities)
{
std::size_t sz(gts.size());
if(sz<1)
int lev((int)dim-m->getMeshDimension());
if(isSameDim && isNoPfl && m->getGeoTypesAtLevel(lev)==gts)//optimized part
{
- _cell_fam_ids_nocpy=true;
const DataArrayInt *famIds(m->getFamilyFieldAtLevel(lev));
if(famIds)
{ _cell_fam_ids=const_cast<DataArrayInt*>(famIds); famIds->incrRef(); }
- _cell_num_ids_nocpy=true;
const DataArrayInt *numIds(m->getNumberFieldAtLevel(lev));
if(numIds)
{ _cell_num_ids=const_cast<DataArrayInt*>(numIds); numIds->incrRef(); }
+ famIds=m->getFamilyFieldAtLevel(1);
+ if(famIds)
+ { _node_fam_ids=const_cast<DataArrayInt*>(famIds); famIds->incrRef(); }
+ numIds=m->getNumberFieldAtLevel(1);
+ if(numIds)
+ { _node_num_ids=const_cast<DataArrayInt*>(numIds); numIds->incrRef(); }
return ;
}
//
- _cell_fam_ids_nocpy=false;
std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > famIdsSafe(sz);
std::vector<const DataArrayInt *> famIds(sz);
bool f(true);
}
if(f)
_cell_fam_ids=DataArrayInt::Aggregate(famIds);
- _cell_num_ids_nocpy=false;
std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > numIdsSafe(sz);
std::vector<const DataArrayInt *> numIds(sz);
bool n(true);
}
if(n)
_cell_num_ids=DataArrayInt::Aggregate(numIds);
+ // node ids management
+ const DataArrayInt *nodeFamIds(m->getFamilyFieldAtLevel(1));
+ if(nodeFamIds)
+ { _node_fam_ids=const_cast<DataArrayInt*>(nodeFamIds); nodeFamIds->incrRef(); }
+ const DataArrayInt *nodeNumIds(m->getNumberFieldAtLevel(1));
+ if(nodeNumIds)
+ { _node_num_ids=const_cast<DataArrayInt*>(nodeNumIds); nodeNumIds->incrRef(); }
}
void MEDUMeshMultiLev::selectPartOfNodes(const DataArrayInt *pflNodes)
{
- if(!pflNodes || !pflNodes->isAllocated())
- return ;
- std::size_t sz(_parts.size());
- std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > a(sz);
- std::vector< const DataArrayInt *> aa(sz);
- for(std::size_t i=0;i<sz;i++)
- {
-
- const DataArrayInt *pfl(_pfls[i]);
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1GTUMesh> m(_parts[i]);
- if(pfl)
- m=dynamic_cast<MEDCoupling1GTUMesh *>(_parts[i]->buildPartOfMySelfKeepCoords(pfl->begin(),pfl->end()));
- DataArrayInt *cellIds=0;
- m->fillCellIdsToKeepFromNodeIds(pflNodes->begin(),pflNodes->end(),true,cellIds);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellIdsSafe(cellIds);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingPointSet> m2(m->buildPartOfMySelfKeepCoords(cellIds->begin(),cellIds->end()));
- int tmp=-1;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> o2n(m2->getNodeIdsInUse(tmp));
- a[i]=o2n->invertArrayO2N2N2O(tmp); aa[i]=a[i];
- if(pfl)
- _pfls[i]=pfl->selectByTupleIdSafe(cellIds->begin(),cellIds->end());
- else
- _pfls[i]=cellIdsSafe;
- }
- _node_reduction=DataArrayInt::Aggregate(aa);
- _node_reduction->sort(true);
- _node_reduction=_node_reduction->buildUnique();
+ if(!pflNodes || !pflNodes->isAllocated())
+ return ;
+ std::size_t sz(_parts.size());
+ std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > a(sz);
+ std::vector< const DataArrayInt *> aa(sz);
+ for(std::size_t i=0;i<sz;i++)
+ {
+ const DataArrayInt *pfl(_pfls[i]);
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1GTUMesh> m(_parts[i]);
+ if(pfl)
+ m=dynamic_cast<MEDCoupling1GTUMesh *>(_parts[i]->buildPartOfMySelfKeepCoords(pfl->begin(),pfl->end()));
+ DataArrayInt *cellIds=0;
+ m->fillCellIdsToKeepFromNodeIds(pflNodes->begin(),pflNodes->end(),true,cellIds);
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellIdsSafe(cellIds);
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingPointSet> m2(m->buildPartOfMySelfKeepCoords(cellIds->begin(),cellIds->end()));
+ int tmp=-1;
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> o2n(m2->getNodeIdsInUse(tmp));
+ a[i]=o2n->invertArrayO2N2N2O(tmp); aa[i]=a[i];
+ if(pfl)
+ _pfls[i]=pfl->selectByTupleIdSafe(cellIds->begin(),cellIds->end());
+ else
+ _pfls[i]=cellIdsSafe;
+ }
+ if(!aa.empty())
+ _node_reduction=DataArrayInt::Aggregate(aa);//general case
+ else
+ _node_reduction=pflNodes->deepCpy();//case where no cells in read mesh.
+ _node_reduction->sort(true);
+ _node_reduction=_node_reduction->buildUnique();
+ if(_node_reduction->getNumberOfTuples()==pflNodes->getNumberOfTuples())
+ return ;//This is the classical case where the input node profile corresponds perfectly to a subset of cells in _parts
+ if(_node_reduction->getNumberOfTuples()>pflNodes->getNumberOfTuples())
+ throw INTERP_KERNEL::Exception("MEDUMeshMultiLev::selectPartOfNodes : internal error in MEDCoupling during cell select from a list of nodes !");
+ // Here the cells available in _parts is not enough to cover all the nodes in pflNodes. So adding vertices cells in _parts...
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> pflNodes2(pflNodes->deepCpy());
+ pflNodes2->sort(true);
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> diff(pflNodes2->buildSubstractionOptimized(_node_reduction));
+ appendVertices(diff,pflNodes2);
}
MEDMeshMultiLev *MEDUMeshMultiLev::prepare() const
return new MEDUMeshMultiLev(*this);
}
-MEDUMeshMultiLev::MEDUMeshMultiLev(const MEDUMeshMultiLev& other):MEDMeshMultiLev(other),_parts(other._parts)
+MEDUMeshMultiLev::MEDUMeshMultiLev(const MEDUMeshMultiLev& other):MEDMeshMultiLev(other),_parts(other._parts),_coords(other._coords)
{
}
}
/*!
+ * To be called only once ! Because due to some optimizations (sometimes aggressive) the internal state can be changed...
* If returned value is false output pointer \a coords is not the internal pointer. If returned value is true output pointer \a coords is directly the internal pointer.
* If true is returned, the \a coords output parameter should be used with care (non const method call) to avoid to change the internal state of MEDFileUMesh instance.
*/
bool MEDUMeshMultiLev::buildVTUArrays(DataArrayDouble *& coords, DataArrayByte *&types, DataArrayInt *&cellLocations, DataArrayInt *& cells, DataArrayInt *&faceLocations, DataArrayInt *&faces) const
{
+ const DataArrayDouble *tmp(0);
if(_parts.empty())
- throw INTERP_KERNEL::Exception("MEDUMeshMultiLev::getVTUArrays : empty array !");
- if(!(const MEDCoupling1GTUMesh *)_parts[0])
- throw INTERP_KERNEL::Exception("MEDUMeshMultiLev::getVTUArrays : first part is null !");
- const DataArrayDouble *tmp(_parts[0]->getCoords());
+ tmp=_coords;
+ else
+ tmp=_parts[0]->getCoords();
if(!tmp)
throw INTERP_KERNEL::Exception("MEDUMeshMultiLev::getVTUArrays : the coordinates are null !");
MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> a(const_cast<DataArrayDouble *>(tmp)); tmp->incrRef();
throw INTERP_KERNEL::Exception("MEDUMeshMultiLev::getVTUArrays : internal error !");
if(scur)
{
- int nnpc(scur->getNumberOfNodesPerCell());
- for(int i=0;i<curNbCells;i++,connPtr+=nnpc)
+ if(cur->getCellModelEnum()!=INTERP_KERNEL::NORM_HEXA27)
{
- *dPtr++=nnpc;
- dPtr=std::copy(connPtr,connPtr+nnpc,dPtr);
- *cPtr++=k; k+=nnpc+1;
+ int nnpc(scur->getNumberOfNodesPerCell());
+ for(int i=0;i<curNbCells;i++,connPtr+=nnpc)
+ {
+ *dPtr++=nnpc;
+ dPtr=std::copy(connPtr,connPtr+nnpc,dPtr);
+ *cPtr++=k; k+=nnpc+1;
+ }
+ }
+ else
+ {
+ for(int i=0;i<curNbCells;i++,connPtr+=27)
+ {
+ *dPtr++=27;
+ for(int j=0;j<27;j++,dPtr++)
+ *dPtr=connPtr[HEXA27_PERM_ARRAY[j]];
+ *cPtr++=k; k+=28;
+ }
}
if(isPolyh)
{ std::fill(ePtr,ePtr+curNbCells,-1); ePtr+=curNbCells; }
{
*dPtr++=connIPtr[1]-connIPtr[0];
dPtr=std::copy(connPtr+connIPtr[0],connPtr+connIPtr[1],dPtr);
- *cPtr++=k; k+=connIPtr[1]-connIPtr[0];
+ *cPtr++=k; k+=connIPtr[1]-connIPtr[0]+1;
}
}
else
{ faceLocations=0; faces=0; }
else
{ faceLocations=e.retn(); faces=f.retn(); }
- return tmp==((DataArrayDouble *)a);
+ return _mesh->isObjectInTheProgeny(coords);
}
void MEDUMeshMultiLev::reorderNodesIfNecessary(MEDCouplingAutoRefCountObjectPtr<DataArrayDouble>& coords, DataArrayInt *nodalConnVTK, DataArrayInt *polyhedNodalConnVTK) const
const DataArrayInt *nr(_node_reduction);
if(!nr)
return ;
+ if(nodalConnVTK->empty() && !polyhedNodalConnVTK)
+ {
+ coords=(coords->selectByTupleIdSafe(nr->begin(),nr->end()));
+ return ;
+ }
int sz(coords->getNumberOfTuples());
std::vector<bool> b(sz,false);
const int *work(nodalConnVTK->begin()),*endW(nodalConnVTK->end());
coords=(coords->selectByTupleIdSafe(nr->begin(),nr->end()));
}
+
+void MEDUMeshMultiLev::appendVertices(const DataArrayInt *verticesToAdd, DataArrayInt *nr)
+{
+ int nbOfCells(verticesToAdd->getNumberOfTuples());//it is not a bug cells are NORM_POINT1
+ MEDMeshMultiLev::appendVertices(verticesToAdd,nr);
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> elt(MEDCoupling1SGTUMesh::New("",INTERP_KERNEL::NORM_POINT1));
+ elt->allocateCells(nbOfCells);
+ for(int i=0;i<nbOfCells;i++)
+ {
+ int pt(verticesToAdd->getIJ(i,0));
+ elt->insertNextCell(&pt,&pt+1);
+ }
+ if(_parts.empty())
+ throw INTERP_KERNEL::Exception("MEDUMeshMultiLev::appendVertices : parts are empty !");
+ elt->setCoords(_parts[0]->getCoords());
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1GTUMesh> elt2((MEDCoupling1SGTUMesh *)elt); elt2->incrRef();
+ _parts.push_back(elt2);
+}
+
//=
-MEDStructuredMeshMultiLev::MEDStructuredMeshMultiLev()
+MEDStructuredMeshMultiLev::MEDStructuredMeshMultiLev(const MEDFileStructuredMesh *m, const std::vector<int>& lev):MEDMeshMultiLev(m),_is_internal(true)
+{
+ initStdFieldOfIntegers(m);
+}
+
+MEDStructuredMeshMultiLev::MEDStructuredMeshMultiLev(const MEDFileStructuredMesh *m, int nbOfNodes, const std::vector<INTERP_KERNEL::NormalizedCellType>& gts, const std::vector<const DataArrayInt *>& pfls, const std::vector<int>& nbEntities):MEDMeshMultiLev(m,nbOfNodes,gts,pfls,nbEntities),_is_internal(true)
+{
+ initStdFieldOfIntegers(m);
+}
+
+MEDStructuredMeshMultiLev::MEDStructuredMeshMultiLev(const MEDStructuredMeshMultiLev& other):MEDMeshMultiLev(other),_is_internal(true),_face_fam_ids(other._face_fam_ids),_face_num_ids(other._face_num_ids)
+{
+}
+
+void MEDStructuredMeshMultiLev::initStdFieldOfIntegers(const MEDFileStructuredMesh *m)
+{
+ // ids fields management
+ const DataArrayInt *tmp(0);
+ tmp=m->getFamilyFieldAtLevel(0);
+ if(tmp)
+ {
+ tmp->incrRef();
+ _cell_fam_ids=const_cast<DataArrayInt *>(tmp);
+ }
+ tmp=m->getNumberFieldAtLevel(0);
+ if(tmp)
+ {
+ tmp->incrRef();
+ _cell_num_ids=const_cast<DataArrayInt *>(tmp);
+ }
+ //
+ tmp=0;
+ tmp=m->getFamilyFieldAtLevel(1);
+ if(tmp)
+ {
+ tmp->incrRef();
+ _node_fam_ids=const_cast<DataArrayInt *>(tmp);
+ }
+ tmp=m->getNumberFieldAtLevel(1);
+ if(tmp)
+ {
+ tmp->incrRef();
+ _node_num_ids=const_cast<DataArrayInt *>(tmp);
+ }
+ // faces (if any)
+ tmp=m->getFamilyFieldAtLevel(-1);
+ if(tmp)
+ {
+ tmp->incrRef();
+ _face_fam_ids=const_cast<DataArrayInt *>(tmp);
+ }
+ tmp=m->getNumberFieldAtLevel(-1);
+ if(tmp)
+ {
+ tmp->incrRef();
+ _face_num_ids=const_cast<DataArrayInt *>(tmp);
+ }
+}
+
+void MEDStructuredMeshMultiLev::moveFaceToCell() const
+{
+ const_cast<MEDStructuredMeshMultiLev *>(this)->_cell_fam_ids=_face_fam_ids; const_cast<MEDStructuredMeshMultiLev *>(this)->_face_fam_ids=0;
+ const_cast<MEDStructuredMeshMultiLev *>(this)->_cell_num_ids=_face_num_ids; const_cast<MEDStructuredMeshMultiLev *>(this)->_face_num_ids=0;
+}
+
+bool MEDStructuredMeshMultiLev::prepareForImplicitUnstructuredMeshCase(MEDMeshMultiLev *&ret) const
{
+ ret=0;
+ if(_geo_types.empty())
+ return false;
+ if(_geo_types.size()!=1)
+ throw INTERP_KERNEL::Exception("MEDStructuredMeshMultiLev::prepareForImplicitUnstructuredMeshCase only one geo types supported at most supported for the moment !");
+ INTERP_KERNEL::NormalizedCellType gt(MEDCouplingStructuredMesh::GetGeoTypeGivenMeshDimension(_mesh->getMeshDimension()));
+ if(_geo_types[0]==gt)
+ return false;
+ MEDCoupling1GTUMesh *facesIfPresent((static_cast<const MEDFileStructuredMesh *>(_mesh))->getImplicitFaceMesh());
+ if(!facesIfPresent)
+ return false;
+ const DataArrayInt *pfl(0),*nr(_node_reduction);
+ if(!_pfls.empty())
+ pfl=_pfls[0];
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1GTUMesh> facesIfPresent2(facesIfPresent); facesIfPresent->incrRef();
+ moveFaceToCell();
+ MEDCouplingAutoRefCountObjectPtr<MEDUMeshMultiLev> ret2(new MEDUMeshMultiLev(*this,facesIfPresent2));
+ if(pfl)
+ ret2->setCellReduction(pfl);
+ if(nr)
+ throw INTERP_KERNEL::Exception("MEDStructuredMeshMultiLev::prepareForImplicitUnstructuredMeshCase : case is not treated yet for node reduction on implicit unstructured mesh.");
+ ret=ret2.retn();
+ return true;
}
-MEDStructuredMeshMultiLev::MEDStructuredMeshMultiLev(int nbOfNodes, const std::vector<INTERP_KERNEL::NormalizedCellType>& gts, const std::vector<const DataArrayInt *>& pfls, const std::vector<int>& nbEntities):MEDMeshMultiLev(nbOfNodes,gts,pfls,nbEntities)
+void MEDStructuredMeshMultiLev::dealWithImplicitUnstructuredMesh(const MEDFileMesh *m)
{
+ const DataArrayInt *tmp(0);
+ tmp=m->getFamilyFieldAtLevel(-1);
+ if(tmp)
+ {
+ tmp->incrRef();
+ _cell_fam_ids=const_cast<DataArrayInt *>(tmp);
+ }
+ tmp=m->getNumberFieldAtLevel(-1);
+ if(tmp)
+ {
+ tmp->incrRef();
+ _cell_num_ids=const_cast<DataArrayInt *>(tmp);
+ }
}
void MEDStructuredMeshMultiLev::selectPartOfNodes(const DataArrayInt *pflNodes)
_pfls[0]=cellIdsSafe;
}
-MEDStructuredMeshMultiLev::MEDStructuredMeshMultiLev(const MEDStructuredMeshMultiLev& other):MEDMeshMultiLev(other)
-{
-}
-
//=
MEDCMeshMultiLev *MEDCMeshMultiLev::New(const MEDFileCMesh *m, const std::vector<int>& levs)
return new MEDCMeshMultiLev(m,gts,pfls,nbEntities);
}
-MEDCMeshMultiLev::MEDCMeshMultiLev(const MEDFileCMesh *m, const std::vector<int>& levs)
+MEDCMeshMultiLev::MEDCMeshMultiLev(const MEDFileCMesh *m, const std::vector<int>& levs):MEDStructuredMeshMultiLev(m,levs)
{
if(!m)
throw INTERP_KERNEL::Exception("MEDCMeshMultiLev constructor : null input pointer !");
if(levs.size()!=1 || levs[0]!=0)
throw INTERP_KERNEL::Exception("MEDCMeshMultiLev constructor : levels supported is 0 only !");
- int mdim(MEDCouplingStructuredMesh::GetGeoTypeGivenMeshDimension(m->getMeshDimension()));
- _coords.resize(mdim);
- for(int i=0;i<mdim;i++)
+ int sdim(m->getSpaceDimension());
+ _coords.resize(sdim);
+ for(int i=0;i<sdim;i++)
{
DataArrayDouble *elt(const_cast<DataArrayDouble *>(m->getMesh()->getCoordsAt(i)));
if(!elt)
throw INTERP_KERNEL::Exception("MEDCMeshMultiLev constructor 2 : presence of null pointer for an vector of double along an axis !");
+ elt->incrRef();
_coords[i]=elt;
}
- // ids fields management
- _cell_fam_ids_nocpy=true; _cell_num_ids_nocpy=true;
- const DataArrayInt *tmp(0);
- tmp=m->getFamilyFieldAtLevel(0);
- if(tmp)
- {
- tmp->incrRef();
- _cell_fam_ids=const_cast<DataArrayInt *>(tmp);
- }
- tmp=m->getNumberFieldAtLevel(0);
- if(tmp)
- {
- tmp->incrRef();
- _cell_num_ids=const_cast<DataArrayInt *>(tmp);
- }
}
-MEDCMeshMultiLev::MEDCMeshMultiLev(const MEDFileCMesh *m, const std::vector<INTERP_KERNEL::NormalizedCellType>& gts, const std::vector<const DataArrayInt *>& pfls, const std::vector<int>& nbEntities):MEDStructuredMeshMultiLev(m->getNumberOfNodes(),gts,pfls,nbEntities)
+MEDCMeshMultiLev::MEDCMeshMultiLev(const MEDFileCMesh *m, const std::vector<INTERP_KERNEL::NormalizedCellType>& gts, const std::vector<const DataArrayInt *>& pfls, const std::vector<int>& nbEntities):MEDStructuredMeshMultiLev(m,m->getNumberOfNodes(),gts,pfls,nbEntities)
{
if(!m)
throw INTERP_KERNEL::Exception("MEDCMeshMultiLev constructor 2 : null input pointer !");
throw INTERP_KERNEL::Exception("MEDCMeshMultiLev constructor 2 : lengthes of gts and pfls must be equal to one !");
int mdim(m->getMeshDimension());
INTERP_KERNEL::NormalizedCellType gt(MEDCouplingStructuredMesh::GetGeoTypeGivenMeshDimension(mdim));
- if(gt!=gts[0])
- throw INTERP_KERNEL::Exception("MEDCMeshMultiLev constructor 2 : the unique geo type is invalid regarding meshdim !");
- _coords.resize(mdim);
- for(int i=0;i<mdim;i++)
- {
- DataArrayDouble *elt(const_cast<DataArrayDouble *>(m->getMesh()->getCoordsAt(i)));
- if(!elt)
- throw INTERP_KERNEL::Exception("MEDCMeshMultiLev constructor 2 : presence of null pointer for an vector of double along an axis !");
- _coords[i]=elt; _coords[i]->incrRef();
- }
- // ids fields management
- _cell_fam_ids_nocpy=true; _cell_num_ids_nocpy=true;
- const DataArrayInt *tmp(0);
- tmp=m->getFamilyFieldAtLevel(0);
- if(tmp)
+ if(gt==gts[0])
{
- tmp->incrRef();
- _cell_fam_ids=const_cast<DataArrayInt *>(tmp);
- }
- tmp=m->getNumberFieldAtLevel(0);
- if(tmp)
- {
- tmp->incrRef();
- _cell_num_ids=const_cast<DataArrayInt *>(tmp);
+ _coords.resize(mdim);
+ for(int i=0;i<mdim;i++)
+ {
+ DataArrayDouble *elt(const_cast<DataArrayDouble *>(m->getMesh()->getCoordsAt(i)));
+ if(!elt)
+ throw INTERP_KERNEL::Exception("MEDCMeshMultiLev constructor 2 : presence of null pointer for an vector of double along an axis !");
+ _coords[i]=elt; _coords[i]->incrRef();
+ }
}
+ else
+ dealWithImplicitUnstructuredMesh(m);
}
MEDCMeshMultiLev::MEDCMeshMultiLev(const MEDCMeshMultiLev& other):MEDStructuredMeshMultiLev(other),_coords(other._coords)
MEDMeshMultiLev *MEDCMeshMultiLev::prepare() const
{
- const DataArrayInt *pfl(_pfls[0]),*nr(_node_reduction);
+ MEDMeshMultiLev *retSpecific(0);
+ if(prepareForImplicitUnstructuredMeshCase(retSpecific))
+ return retSpecific;
+ const DataArrayInt *pfl(0),*nr(_node_reduction);
+ if(!_pfls.empty())
+ pfl=_pfls[0];
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> nnr;
std::vector<int> cgs,ngs(getNodeGridStructure());
cgs.resize(ngs.size());
if(MEDCouplingStructuredMesh::IsPartStructured(pfl->begin(),pfl->end(),cgs,cellParts))
{
MEDCouplingAutoRefCountObjectPtr<MEDCMeshMultiLev> ret(new MEDCMeshMultiLev(*this));
+ ret->_is_internal=false;
if(nr)
{ nnr=nr->deepCpy(); nnr->sort(true); ret->setNodeReduction(nnr); }
ret->_nb_entities[0]=pfl->getNumberOfTuples();
if(famIds)
{
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp(famIds->selectByTupleIdSafe(pfl->begin(),pfl->end()));
- ret2->setFamilyIdsOnCells(tmp,false);
+ ret2->setFamilyIdsOnCells(tmp);
}
if(numIds)
{
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp(numIds->selectByTupleIdSafe(pfl->begin(),pfl->end()));
- ret2->setNumberIdsOnCells(tmp,false);
+ ret2->setNumberIdsOnCells(tmp);
}
return ret2.retn();
-
+
}
else
{
}
}
-std::vector< DataArrayDouble * > MEDCMeshMultiLev::buildVTUArrays() const
+/*!
+ * \a param [out] isInternal if true the returned pointers are those in main data structure. If false those pointers have been built espacially for that method.
+ */
+std::vector< DataArrayDouble * > MEDCMeshMultiLev::buildVTUArrays(bool& isInternal) const
{
+ isInternal=_is_internal;
std::size_t sz(_coords.size());
std::vector< DataArrayDouble * > ret(sz);
for(std::size_t i=0;i<sz;i++)
return new MEDCurveLinearMeshMultiLev(m,gts,pfls,nbEntities);
}
-MEDCurveLinearMeshMultiLev::MEDCurveLinearMeshMultiLev(const MEDFileCurveLinearMesh *m, const std::vector<int>& levs)
+MEDCurveLinearMeshMultiLev::MEDCurveLinearMeshMultiLev(const MEDFileCurveLinearMesh *m, const std::vector<int>& levs):MEDStructuredMeshMultiLev(m,levs)
{
if(!m)
throw INTERP_KERNEL::Exception("MEDCurveLinearMeshMultiLev constructor : null input pointer !");
coords->incrRef();
_coords=coords;
_structure=m->getMesh()->getNodeGridStructure();
- // ids fields management
- _cell_fam_ids_nocpy=true; _cell_num_ids_nocpy=true;
- const DataArrayInt *tmp(0);
- tmp=m->getFamilyFieldAtLevel(0);
- if(tmp)
- {
- tmp->incrRef();
- _cell_fam_ids=const_cast<DataArrayInt *>(tmp);
- }
- tmp=m->getNumberFieldAtLevel(0);
- if(tmp)
- {
- tmp->incrRef();
- _cell_num_ids=const_cast<DataArrayInt *>(tmp);
- }
}
-MEDCurveLinearMeshMultiLev::MEDCurveLinearMeshMultiLev(const MEDFileCurveLinearMesh *m, const std::vector<INTERP_KERNEL::NormalizedCellType>& gts, const std::vector<const DataArrayInt *>& pfls, const std::vector<int>& nbEntities):MEDStructuredMeshMultiLev(m->getNumberOfNodes(),gts,pfls,nbEntities)
+MEDCurveLinearMeshMultiLev::MEDCurveLinearMeshMultiLev(const MEDFileCurveLinearMesh *m, const std::vector<INTERP_KERNEL::NormalizedCellType>& gts, const std::vector<const DataArrayInt *>& pfls, const std::vector<int>& nbEntities):MEDStructuredMeshMultiLev(m,m->getNumberOfNodes(),gts,pfls,nbEntities)
{
if(!m)
throw INTERP_KERNEL::Exception("MEDCurveLinearMeshMultiLev constructor 2 : null input pointer !");
if(gts.size()!=1 || pfls.size()!=1)
throw INTERP_KERNEL::Exception("MEDCurveLinearMeshMultiLev constructor 2 : lengthes of gts and pfls must be equal to one !");
- int mdim(MEDCouplingStructuredMesh::GetGeoTypeGivenMeshDimension(m->getMeshDimension()));
- if(mdim!=gts[0])
- throw INTERP_KERNEL::Exception("MEDCurveLinearMeshMultiLev constructor 2 : the unique geo type is invalid regarding meshdim !");
- DataArrayDouble *coords(const_cast<DataArrayDouble *>(m->getMesh()->getCoords()));
- if(!coords)
- throw INTERP_KERNEL::Exception("MEDCurveLinearMeshMultiLev constructor 2 : no coords set !");
- coords->incrRef();
- _coords=coords;
- _structure=m->getMesh()->getNodeGridStructure();
- // ids fields management
- _cell_fam_ids_nocpy=true; _cell_num_ids_nocpy=true;
- const DataArrayInt *tmp(0);
- tmp=m->getFamilyFieldAtLevel(0);
- if(tmp)
+ INTERP_KERNEL::NormalizedCellType gt(MEDCouplingStructuredMesh::GetGeoTypeGivenMeshDimension(m->getMeshDimension()));
+ if(gt==gts[0])
{
- tmp->incrRef();
- _cell_fam_ids=const_cast<DataArrayInt *>(tmp);
- }
- tmp=m->getNumberFieldAtLevel(0);
- if(tmp)
- {
- tmp->incrRef();
- _cell_num_ids=const_cast<DataArrayInt *>(tmp);
+ DataArrayDouble *coords(const_cast<DataArrayDouble *>(m->getMesh()->getCoords()));
+ if(!coords)
+ throw INTERP_KERNEL::Exception("MEDCurveLinearMeshMultiLev constructor 2 : no coords set !");
+ coords->incrRef();
+ _coords=coords;
+ _structure=m->getMesh()->getNodeGridStructure();
}
+ else
+ dealWithImplicitUnstructuredMesh(m);
}
MEDCurveLinearMeshMultiLev::MEDCurveLinearMeshMultiLev(const MEDCurveLinearMeshMultiLev& other):MEDStructuredMeshMultiLev(other),_coords(other._coords),_structure(other._structure)
MEDMeshMultiLev *MEDCurveLinearMeshMultiLev::prepare() const
{
- const DataArrayInt *pfl(_pfls[0]),*nr(_node_reduction);
+ MEDMeshMultiLev *retSpecific(0);
+ if(prepareForImplicitUnstructuredMeshCase(retSpecific))
+ return retSpecific;
+ const DataArrayInt *pfl(0),*nr(_node_reduction);
+ if(!_pfls.empty())
+ pfl=_pfls[0];
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> nnr;
std::vector<int> cgs,ngs(getNodeGridStructure());
cgs.resize(ngs.size());
}
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> p(MEDCouplingStructuredMesh::BuildExplicitIdsFrom(ngs,nodeParts));
MEDCouplingAutoRefCountObjectPtr<MEDCurveLinearMeshMultiLev> ret(new MEDCurveLinearMeshMultiLev(*this));
+ ret->_is_internal=false;
if(nr)
{ nnr=nr->deepCpy(); nnr->sort(true); ret->setNodeReduction(nnr); }
ret->_nb_entities[0]=pfl->getNumberOfTuples();
if(famIds)
{
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp(famIds->selectByTupleIdSafe(pfl->begin(),pfl->end()));
- ret2->setFamilyIdsOnCells(tmp,false);
+ ret2->setFamilyIdsOnCells(tmp);
}
if(numIds)
{
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp(numIds->selectByTupleIdSafe(pfl->begin(),pfl->end()));
- ret2->setNumberIdsOnCells(tmp,false);
+ ret2->setNumberIdsOnCells(tmp);
}
return ret2.retn();
}
}
}
-void MEDCurveLinearMeshMultiLev::buildVTUArrays(DataArrayDouble *&coords, std::vector<int>& nodeStrct) const
+void MEDCurveLinearMeshMultiLev::buildVTUArrays(DataArrayDouble *&coords, std::vector<int>& nodeStrct, bool& isInternal) const
{
+ isInternal=_is_internal;
nodeStrct=_structure;
const DataArrayDouble *coo(_coords);
if(!coo)
void MEDFileField1TSStructItem2::checkWithMeshStructForCells(const MEDFileMeshStruct *mst, const MEDFileFieldGlobsReal *globs)
{
+ if(!mst->doesManageGeoType(_geo_type))
+ {
+ MEDFileMeshStruct *mstUnConstCasted(const_cast<MEDFileMeshStruct *>(mst));
+ mstUnConstCasted->appendIfImplicitType(_geo_type);
+ }
int nbOfEnt=mst->getNumberOfElemsOfGeoType(_geo_type);
checkInRange(nbOfEnt,1,globs);
}
}
}
-bool MEDFileField1TSStructItem2::isFastlyEqual(int& startExp, INTERP_KERNEL::NormalizedCellType gt, const char *pflName) const
+bool MEDFileField1TSStructItem2::isFastlyEqual(int& startExp, INTERP_KERNEL::NormalizedCellType gt, const std::string& pflName) const
{
if(startExp!=_start_end.first)
return false;
return true;
}
-bool MEDFileField1TSStructItem2::operator==(const MEDFileField1TSStructItem2& other) const throw(INTERP_KERNEL::Exception)
+bool MEDFileField1TSStructItem2::operator==(const MEDFileField1TSStructItem2& other) const
{
//_nb_of_entity is not taken into account here. It is not a bug, because no mesh consideration needed here to perform fast compare.
//idem for _loc. It is not an effective attribute for support comparison.
}
else
{
- arr->setName(NEWLY_CREATED_PFL_NAME);
+ arr->setName(arrs[0]->getName());
std::pair<int,int> p(0,oldNbTuples);
std::string a,b;
MEDFileField1TSStructItem2 ret(gt,p,a,b);
return ret;
}
-std::vector<const BigMemoryObject *> MEDFileField1TSStructItem2::getDirectChildren() const
+std::vector<const BigMemoryObject *> MEDFileField1TSStructItem2::getDirectChildrenWithNull() const
{
std::vector<const BigMemoryObject *> ret;
- const DataArrayInt *pfl(_pfl);
- if(pfl)
- ret.push_back(pfl);
+ ret.push_back((const DataArrayInt *)_pfl);
return ret;
}
void MEDFileField1TSStructItem::checkWithMeshStruct(const MEDFileMeshStruct *mst, const MEDFileFieldGlobsReal *globs)
{
switch(_type)
- {
+ {
case ON_NODES:
{
int nbOfEnt=mst->getNumberOfNodes();
}
default:
throw INTERP_KERNEL::Exception("MEDFileField1TSStructItem::checkWithMeshStruct : not managed field type !");
- }
+ }
}
-bool MEDFileField1TSStructItem::operator==(const MEDFileField1TSStructItem& other) const throw(INTERP_KERNEL::Exception)
+bool MEDFileField1TSStructItem::operator==(const MEDFileField1TSStructItem& other) const
{
if(_type!=other._type)
return false;
return false;
}
-const MEDFileField1TSStructItem2& MEDFileField1TSStructItem::operator[](std::size_t i) const throw(INTERP_KERNEL::Exception)
+const MEDFileField1TSStructItem2& MEDFileField1TSStructItem::operator[](std::size_t i) const
{
if(i>=_items.size())
throw INTERP_KERNEL::Exception("MEDFileField1TSStructItem::operator[] : input is not in valid range !");
return ret;
}
-std::vector<const BigMemoryObject *> MEDFileField1TSStructItem::getDirectChildren() const
+std::vector<const BigMemoryObject *> MEDFileField1TSStructItem::getDirectChildrenWithNull() const
{
std::vector<const BigMemoryObject *> ret;
for(std::vector< MEDFileField1TSStructItem2 >::const_iterator it=_items.begin();it!=_items.end();it++)
return MEDMeshMultiLev::New(mst->getTheMesh(),a0,a1,a2);
}
+std::vector<INTERP_KERNEL::NormalizedCellType> MEDFileField1TSStructItem::getGeoTypes(const MEDFileMesh *m) const
+{
+ std::vector<INTERP_KERNEL::NormalizedCellType> ret;
+ if(_type==ON_NODES)
+ {
+ if(!_items.empty() && _items[0].getPflName().empty())
+ {
+ if(m)
+ return m->getAllGeoTypes();
+ else
+ return ret;
+ }
+ else
+ return ret;
+ }
+ for(std::vector< MEDFileField1TSStructItem2 >::const_iterator it=_items.begin();it!=_items.end();it++)
+ {
+ INTERP_KERNEL::NormalizedCellType elt((*it).getGeo());
+ std::vector<INTERP_KERNEL::NormalizedCellType>::iterator it2(std::find(ret.begin(),ret.end(),elt));
+ if(it2==ret.end())
+ ret.push_back(elt);
+ }
+ return ret;
+}
+
MEDFileField1TSStructItem MEDFileField1TSStructItem::BuildItemFrom(const MEDFileAnyTypeField1TS *ref, const MEDFileMeshStruct *meshSt)
{
TypeOfField atype;
std::vector< std::vector<std::string> > pfls,locs;
std::vector< std::vector<TypeOfField> > typesF;
std::vector<INTERP_KERNEL::NormalizedCellType> geoTypes;
- std::vector< std::vector<std::pair<int,int> > > strtEnds=ref->getFieldSplitedByType(0,geoTypes,typesF,pfls,locs);
+ std::vector< std::vector<std::pair<int,int> > > strtEnds=ref->getFieldSplitedByType(std::string(),geoTypes,typesF,pfls,locs);
std::size_t nbOfGeoTypes(geoTypes.size());
if(nbOfGeoTypes==0)
throw INTERP_KERNEL::Exception("MEDFileField1TSStruct : not null by empty ref !");
return ret;
}
-std::vector<const BigMemoryObject *> MEDFileField1TSStruct::getDirectChildren() const
+std::vector<const BigMemoryObject *> MEDFileField1TSStruct::getDirectChildrenWithNull() const
{
std::vector<const BigMemoryObject *> ret;
for(std::vector<MEDFileField1TSStructItem>::const_iterator it=_already_checked.begin();it!=_already_checked.end();it++)
else
{
if(!presenceOfPartialNodeDiscr(pos1))
- {//we have only all nodes, no cell definition info -> level 0;
- std::vector<int> levs(1,0);
- return MEDMeshMultiLev::New(mst->getTheMesh(),levs);
+ {//we have only all nodes, no cell definition info -> all existing levels !;
+ return MEDMeshMultiLev::New(mst->getTheMesh(),mst->getTheMesh()->getNonEmptyLevels());
}
else
return MEDMeshMultiLev::NewOnlyOnNode(mst->getTheMesh(),_already_checked[pos1][0].getPfl(globs));
return true;
}
+std::vector<INTERP_KERNEL::NormalizedCellType> MEDFileField1TSStruct::getGeoTypes(const MEDFileMesh *m) const
+{
+ std::vector<INTERP_KERNEL::NormalizedCellType> ret;
+ for(std::vector<MEDFileField1TSStructItem>::const_iterator it=_already_checked.begin();it!=_already_checked.end();it++)
+ {
+ std::vector<INTERP_KERNEL::NormalizedCellType> ret2((*it).getGeoTypes(m));
+ for(std::vector<INTERP_KERNEL::NormalizedCellType>::const_iterator it2=ret2.begin();it2!=ret2.end();it2++)
+ {
+ if(*it2==INTERP_KERNEL::NORM_ERROR)
+ continue;
+ std::vector<INTERP_KERNEL::NormalizedCellType>::iterator it3(std::find(ret.begin(),ret.end(),*it2));
+ if(it3==ret.end())
+ ret.push_back(*it2);
+ }
+ }
+ return ret;
+}
+
/*!
* Returns true if presence in \a this of discretization ON_CELLS, ON_GAUSS_PT, ON_GAUSS_NE.
* If true is returned the pos of the easiest is returned. The easiest is the first element in \a this having the less splitted subparts.
return ret;
}
-std::vector<const BigMemoryObject *> MEDFileFastCellSupportComparator::getDirectChildren() const
+std::vector<const BigMemoryObject *> MEDFileFastCellSupportComparator::getDirectChildrenWithNull() const
{
std::vector<const BigMemoryObject *> ret;
const MEDFileMeshStruct *mst(_mesh_comp);
if(mst)
ret.push_back(mst);
for(std::vector< MEDCouplingAutoRefCountObjectPtr<MEDFileField1TSStruct> >::const_iterator it=_f1ts_cmps.begin();it!=_f1ts_cmps.end();it++)
- {
- const MEDFileField1TSStruct *cur(*it);
- if(cur)
- ret.push_back(cur);
- }
+ ret.push_back((const MEDFileField1TSStruct *)*it);
return ret;
}
const MEDFileField1TSStruct *objRef(_f1ts_cmps[timeStepId-1]);
return objRef->isDataSetSupportFastlyEqualTo(*obj,globs);
}
+
+int MEDFileFastCellSupportComparator::getNumberOfTS() const
+{
+ return _f1ts_cmps.size();
+}
+
+std::vector<INTERP_KERNEL::NormalizedCellType> MEDFileFastCellSupportComparator::getGeoTypesAt(int timeStepId, const MEDFileMesh *m) const
+{
+ if(timeStepId<0 || timeStepId>=(int)_f1ts_cmps.size())
+ {
+ std::ostringstream oss; oss << "MEDFileFastCellSupportComparator::getGeoTypesAt : requested time step id #" << timeStepId << " is not in [0," << _f1ts_cmps.size() << ") !";
+ throw INTERP_KERNEL::Exception(oss.str().c_str());
+ }
+ const MEDFileField1TSStruct *elt(_f1ts_cmps[timeStepId]);
+ if(!elt)
+ {
+ std::ostringstream oss; oss << "MEDFileFastCellSupportComparator::getGeoTypesAt : requested time step id #" << timeStepId << " points to a NULL pointer !";
+ throw INTERP_KERNEL::Exception(oss.str().c_str());
+ }
+ return elt->getGeoTypes(m);
+}
