#include "MEDCouplingFieldOverTime.hxx"
#include "MEDCouplingDefinitionTime.hxx"
#include "MEDCouplingFieldDiscretization.hxx"
-#include "MEDCouplingAHOGMesh.hxx"
+#include "MEDCouplingCartesianAMRMesh.hxx"
+#include "MEDCouplingAMRAttribute.hxx"
+#include "MEDCouplingMatrix.hxx"
#include "MEDCouplingTypemaps.i"
#include "InterpKernelAutoPtr.hxx"
+#include "BoxSplittingOptions.hxx"
using namespace ParaMEDMEM;
using namespace INTERP_KERNEL;
}
//$$$$$$$$$$$$$$$$$$
+////////////////////
+%typemap(out) MEDCouplingCartesianAMRPatchGen*
+{
+ $result=convertCartesianAMRPatch($1,$owner);
+}
+//$$$$$$$$$$$$$$$$$$
+
+////////////////////
+%typemap(out) MEDCouplingCartesianAMRMeshGen*
+{
+ $result=convertCartesianAMRMesh($1,$owner);
+}
+//$$$$$$$$$$$$$$$$$$
+
+////////////////////
+%typemap(out) MEDCouplingDataForGodFather*
+{
+ $result=convertDataForGodFather($1,$owner);
+}
+//$$$$$$$$$$$$$$$$$$
////////////////////
%typemap(out) ParaMEDMEM::MEDCoupling1GTUMesh*
%newobject ParaMEDMEM::MEDCouplingStructuredMesh::build1SGTUnstructured;
%newobject ParaMEDMEM::MEDCouplingStructuredMesh::build1SGTSubLevelMesh;
%newobject ParaMEDMEM::MEDCouplingStructuredMesh::BuildExplicitIdsFrom;
+%newobject ParaMEDMEM::MEDCouplingStructuredMesh::ExtractFieldOfDoubleFrom;
%newobject ParaMEDMEM::MEDCouplingStructuredMesh::Build1GTNodalConnectivity;
%newobject ParaMEDMEM::MEDCouplingStructuredMesh::Build1GTNodalConnectivityOfSubLevelMesh;
%newobject ParaMEDMEM::MEDCouplingCMesh::New;
%newobject ParaMEDMEM::MEDCouplingCMesh::clone;
%newobject ParaMEDMEM::MEDCouplingCMesh::getCoordsAt;
%newobject ParaMEDMEM::MEDCouplingIMesh::New;
+%newobject ParaMEDMEM::MEDCouplingIMesh::asSingleCell;
+%newobject ParaMEDMEM::MEDCouplingIMesh::buildWithGhost;
%newobject ParaMEDMEM::MEDCouplingIMesh::convertToCartesian;
%newobject ParaMEDMEM::MEDCouplingCurveLinearMesh::New;
%newobject ParaMEDMEM::MEDCouplingCurveLinearMesh::clone;
%newobject ParaMEDMEM::MEDCouplingMultiFields::New;
%newobject ParaMEDMEM::MEDCouplingMultiFields::deepCpy;
%newobject ParaMEDMEM::MEDCouplingFieldOverTime::New;
-%newobject ParaMEDMEM::MEDCouplingAHOGPatch::getMesh;
-%newobject ParaMEDMEM::MEDCouplingAHOGPatch::__getitem__;
-%newobject ParaMEDMEM::MEDCouplingAHOGMesh::New;
-%newobject ParaMEDMEM::MEDCouplingAHOGMesh::buildUnstructured;
-%newobject ParaMEDMEM::MEDCouplingAHOGMesh::getGodFather;
-%newobject ParaMEDMEM::MEDCouplingAHOGMesh::getFather;
-%newobject ParaMEDMEM::MEDCouplingAHOGMesh::getPatch;
-%newobject ParaMEDMEM::MEDCouplingAHOGMesh::__getitem__;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRPatchGen::getMesh;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRPatchGen::__getitem__;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMeshGen::buildUnstructured;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMeshGen::extractGhostFrom;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMeshGen::buildMeshFromPatchEnvelop;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMeshGen::buildMeshOfDirectChildrenOnly;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMeshGen::getImageMesh;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMeshGen::getGodFather;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMeshGen::getFather;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMeshGen::getPatch;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMeshGen::createCellFieldOnPatch;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMeshGen::findPatchesInTheNeighborhoodOf;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMeshGen::__getitem__;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMesh::New;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMesh::getDataConst;
+%newobject ParaMEDMEM::MEDCouplingCartesianAMRMesh::getData;
+%newobject ParaMEDMEM::MEDCouplingAMRAttribute::New;
+%newobject ParaMEDMEM::MEDCouplingAMRAttribute::getFieldOn;
+%newobject ParaMEDMEM::MEDCouplingAMRAttribute::buildCellFieldOnRecurseWithoutOverlapWithoutGhost;
+%newobject ParaMEDMEM::MEDCouplingAMRAttribute::buildCellFieldOnWithGhost;
+%newobject ParaMEDMEM::DenseMatrix::New;
+%newobject ParaMEDMEM::DenseMatrix::deepCpy;
+%newobject ParaMEDMEM::DenseMatrix::shallowCpy;
+%newobject ParaMEDMEM::DenseMatrix::getData;
+%newobject ParaMEDMEM::DenseMatrix::matVecMult;
+%newobject ParaMEDMEM::DenseMatrix::MatVecMult;
+%newobject ParaMEDMEM::DenseMatrix::__add__;
+%newobject ParaMEDMEM::DenseMatrix::__sub__;
+%newobject ParaMEDMEM::DenseMatrix::__mul__;
%feature("unref") MEDCouplingPointSet "$this->decrRef();"
%feature("unref") MEDCouplingMesh "$this->decrRef();"
%feature("unref") MEDCouplingMultiFields "$this->decrRef();"
%feature("unref") MEDCouplingFieldTemplate "$this->decrRef();"
%feature("unref") MEDCouplingMultiFields "$this->decrRef();"
-%feature("unref") MEDCouplingAHOGMesh "$this->decrRef();"
-%feature("unref") MEDCouplingAHOGPatch "$this->decrRef();"
+%feature("unref") MEDCouplingCartesianAMRMeshGen "$this->decrRef();"
+%feature("unref") MEDCouplingCartesianAMRMesh "$this->decrRef();"
+%feature("unref") MEDCouplingCartesianAMRMeshSub "$this->decrRef();"
+%feature("unref") MEDCouplingCartesianAMRPatchGen "$this->decrRef();"
+%feature("unref") MEDCouplingCartesianAMRPatchGF "$this->decrRef();"
+%feature("unref") MEDCouplingCartesianAMRPatch "$this->decrRef();"
+%feature("unref") MEDCouplingDataForGodFather "$this->decrRef();"
+%feature("unref") MEDCouplingAMRAttribute "$this->decrRef();"
+%feature("unref") DenseMatrix "$this->decrRef();"
%rename(assign) *::operator=;
%ignore ParaMEDMEM::MEDCouplingGaussLocalization::pushTinySerializationIntInfo;
%include "MEDCouplingRefCountObject.i"
%include "MEDCouplingMemArray.i"
+namespace INTERP_KERNEL
+{
+ /*!
+ * \class BoxSplittingOptions
+ * Class defining the options for box splitting used for AMR algorithm like creation of patches following a criterion.
+ */
+ class BoxSplittingOptions
+ {
+ public:
+ BoxSplittingOptions();
+ void init() throw(INTERP_KERNEL::Exception);
+ double getEffeciency() const throw(INTERP_KERNEL::Exception);
+ void setEffeciency(double effeciency) throw(INTERP_KERNEL::Exception);
+ double getEffeciencySnd() const throw(INTERP_KERNEL::Exception);
+ void setEffeciencySnd(double effeciencySnd) throw(INTERP_KERNEL::Exception);
+ int getMinCellDirection() const throw(INTERP_KERNEL::Exception);
+ void setMinCellDirection(int minCellDirection) throw(INTERP_KERNEL::Exception);
+ int getMaxCells() const throw(INTERP_KERNEL::Exception);
+ void setMaxCells(int maxCells) throw(INTERP_KERNEL::Exception);
+ void copyOptions(const BoxSplittingOptions & other) throw(INTERP_KERNEL::Exception);
+ std::string printOptions() const throw(INTERP_KERNEL::Exception);
+ %extend
+ {
+ std::string __str__() const throw(INTERP_KERNEL::Exception)
+ {
+ return self->printOptions();
+ }
+ }
+ };
+}
+
namespace ParaMEDMEM
{
typedef enum
return oss.str();
}
+ PyObject *structurizeMe(double eps=1e-12) const throw(INTERP_KERNEL::Exception)
+ {
+ DataArrayInt *cellPerm(0),*nodePerm(0);
+ MEDCouplingCMesh *retCpp(self->structurizeMe(cellPerm,nodePerm,eps));
+ PyObject *ret(PyTuple_New(3));
+ PyTuple_SetItem(ret,0,SWIG_NewPointerObj(SWIG_as_voidptr(retCpp),SWIGTYPE_p_ParaMEDMEM__MEDCouplingCMesh, SWIG_POINTER_OWN | 0 ));
+ PyTuple_SetItem(ret,1,SWIG_NewPointerObj(SWIG_as_voidptr(cellPerm),SWIGTYPE_p_ParaMEDMEM__DataArrayInt, SWIG_POINTER_OWN | 0 ));
+ PyTuple_SetItem(ret,2,SWIG_NewPointerObj(SWIG_as_voidptr(nodePerm),SWIGTYPE_p_ParaMEDMEM__DataArrayInt, SWIG_POINTER_OWN | 0 ));
+ return ret;
+ }
+
static MEDCoupling1SGTUMesh *Merge1SGTUMeshes(PyObject *li) throw(INTERP_KERNEL::Exception)
{
std::vector<const ParaMEDMEM::MEDCoupling1SGTUMesh *> tmp;
static INTERP_KERNEL::NormalizedCellType GetGeoTypeGivenMeshDimension(int meshDim) throw(INTERP_KERNEL::Exception);
MEDCoupling1SGTUMesh *build1SGTSubLevelMesh() const throw(INTERP_KERNEL::Exception);
static int DeduceNumberOfGivenStructure(const std::vector<int>& st) throw(INTERP_KERNEL::Exception);
+ static std::vector<int> GetSplitVectFromStruct(const std::vector<int>& strct) throw(INTERP_KERNEL::Exception);
%extend
{
virtual MEDCouplingStructuredMesh *buildStructuredSubPart(PyObject *cellPart) const throw(INTERP_KERNEL::Exception)
return MEDCouplingStructuredMesh::BuildExplicitIdsFrom(tmp5,inp);
}
+ static DataArrayDouble *ExtractFieldOfDoubleFrom(const std::vector<int>& st, const DataArrayDouble *fieldOfDbl, PyObject *partCompactFormat) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<int,int> > inp;
+ convertPyToVectorPairInt(partCompactFormat,inp);
+ return MEDCouplingStructuredMesh::ExtractFieldOfDoubleFrom(st,fieldOfDbl,inp);
+ }
+
static int DeduceNumberOfGivenRangeInCompactFrmt(PyObject *part) throw(INTERP_KERNEL::Exception)
{
std::vector< std::pair<int,int> > inp;
return MEDCouplingStructuredMesh::Build1GTNodalConnectivityOfSubLevelMesh(tmp,tmp+szArr);
}
+ static std::vector<int> GetDimensionsFromCompactFrmt(PyObject *partCompactFormat) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<int,int> > inp;
+ convertPyToVectorPairInt(partCompactFormat,inp);
+ return MEDCouplingStructuredMesh::GetDimensionsFromCompactFrmt(inp);
+ }
+
+ static PyObject *GetCompactFrmtFromDimensions(const std::vector<int>& dims) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<int,int> > ret(MEDCouplingStructuredMesh::GetCompactFrmtFromDimensions(dims));
+ PyObject *retPy=PyList_New(ret.size());
+ for(std::size_t i=0;i<ret.size();i++)
+ {
+ PyObject *tmp=PyTuple_New(2);
+ PyTuple_SetItem(tmp,0,PyInt_FromLong(ret[i].first));
+ PyTuple_SetItem(tmp,1,PyInt_FromLong(ret[i].second));
+ PyList_SetItem(retPy,i,tmp);
+ }
+ return retPy;
+ }
+
+ static PyObject *IntersectRanges(PyObject *r1, PyObject *r2) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<int,int> > r1Cpp,r2Cpp;
+ convertPyToVectorPairInt(r1,r1Cpp);
+ convertPyToVectorPairInt(r2,r2Cpp);
+ std::vector< std::pair<int,int> > ret(MEDCouplingStructuredMesh::IntersectRanges(r1Cpp,r2Cpp));
+ PyObject *retPy=PyList_New(ret.size());
+ for(std::size_t i=0;i<ret.size();i++)
+ {
+ PyObject *tmp=PyTuple_New(2);
+ PyTuple_SetItem(tmp,0,PyInt_FromLong(ret[i].first));
+ PyTuple_SetItem(tmp,1,PyInt_FromLong(ret[i].second));
+ PyList_SetItem(retPy,i,tmp);
+ }
+ return retPy;
+ }
+
static PyObject *IsPartStructured(PyObject *li, PyObject *st) throw(INTERP_KERNEL::Exception)
{
int szArr,sw,iTypppArr;
PyTuple_SetItem(ret,1,ret1Py);
return ret;
}
+
+ static PyObject *ChangeReferenceFromGlobalOfCompactFrmt(PyObject *bigInAbs, PyObject *partOfBigInAbs, bool check=true) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<int,int> > param0,param1,ret;
+ convertPyToVectorPairInt(bigInAbs,param0);
+ convertPyToVectorPairInt(partOfBigInAbs,param1);
+ MEDCouplingStructuredMesh::ChangeReferenceFromGlobalOfCompactFrmt(param0,param1,ret,check);
+ PyObject *retPy(PyList_New(ret.size()));
+ for(std::size_t i=0;i<ret.size();i++)
+ {
+ PyObject *tmp(PyTuple_New(2));
+ PyTuple_SetItem(tmp,0,PyInt_FromLong(ret[i].first));
+ PyTuple_SetItem(tmp,1,PyInt_FromLong(ret[i].second));
+ PyList_SetItem(retPy,i,tmp);
+ }
+ return retPy;
+ }
+
+ static PyObject *ChangeReferenceToGlobalOfCompactFrmt(PyObject *bigInAbs, PyObject *partOfBigRelativeToBig, bool check=true) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<int,int> > param0,param1,ret;
+ convertPyToVectorPairInt(bigInAbs,param0);
+ convertPyToVectorPairInt(partOfBigRelativeToBig,param1);
+ MEDCouplingStructuredMesh::ChangeReferenceToGlobalOfCompactFrmt(param0,param1,ret,check);
+ PyObject *retPy(PyList_New(ret.size()));
+ for(std::size_t i=0;i<ret.size();i++)
+ {
+ PyObject *tmp(PyTuple_New(2));
+ PyTuple_SetItem(tmp,0,PyInt_FromLong(ret[i].first));
+ PyTuple_SetItem(tmp,1,PyInt_FromLong(ret[i].second));
+ PyList_SetItem(retPy,i,tmp);
+ }
+ return retPy;
+ }
}
};
std::string getAxisUnit() const throw(INTERP_KERNEL::Exception);
double getMeasureOfAnyCell() const throw(INTERP_KERNEL::Exception);
MEDCouplingCMesh *convertToCartesian() const throw(INTERP_KERNEL::Exception);
- void refineWithFactor(int factor) throw(INTERP_KERNEL::Exception);
+ void refineWithFactor(const std::vector<int>& factors) throw(INTERP_KERNEL::Exception);
+ MEDCouplingIMesh *asSingleCell() const throw(INTERP_KERNEL::Exception);
+ MEDCouplingIMesh *buildWithGhost(int ghostLev) const throw(INTERP_KERNEL::Exception);
%extend
{
MEDCouplingIMesh()
self->setDXYZ(originPtr,originPtr+nbTuples);
}
+ static void CondenseFineToCoarse(const std::vector<int>& coarseSt, const DataArrayDouble *fineDA, PyObject *fineLocInCoarse, const std::vector<int>& facts, DataArrayDouble *coarseDA) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<int,int> > inp;
+ convertPyToVectorPairInt(fineLocInCoarse,inp);
+ MEDCouplingIMesh::CondenseFineToCoarse(coarseSt,fineDA,inp,facts,coarseDA);
+ }
+
+ static void CondenseFineToCoarseGhost(const std::vector<int>& coarseSt, const DataArrayDouble *fineDA, PyObject *fineLocInCoarse, const std::vector<int>& facts, DataArrayDouble *coarseDA, int ghostSize) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<int,int> > inp;
+ convertPyToVectorPairInt(fineLocInCoarse,inp);
+ MEDCouplingIMesh::CondenseFineToCoarseGhost(coarseSt,fineDA,inp,facts,coarseDA,ghostSize);
+ }
+
+ static void SpreadCoarseToFine(const DataArrayDouble *coarseDA, const std::vector<int>& coarseSt, DataArrayDouble *fineDA, PyObject *fineLocInCoarse, const std::vector<int>& facts) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<int,int> > inp;
+ convertPyToVectorPairInt(fineLocInCoarse,inp);
+ MEDCouplingIMesh::SpreadCoarseToFine(coarseDA,coarseSt,fineDA,inp,facts);
+ }
+
+ static void SpreadCoarseToFineGhost(const DataArrayDouble *coarseDA, const std::vector<int>& coarseSt, DataArrayDouble *fineDA, PyObject *fineLocInCoarse, const std::vector<int>& facts, int ghostSize) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<int,int> > inp;
+ convertPyToVectorPairInt(fineLocInCoarse,inp);
+ MEDCouplingIMesh::SpreadCoarseToFineGhost(coarseDA,coarseSt,fineDA,inp,facts,ghostSize);
+ }
+
+ static void SpreadCoarseToFineGhostZone(const DataArrayDouble *coarseDA, const std::vector<int>& coarseSt, DataArrayDouble *fineDA, PyObject *fineLocInCoarse, const std::vector<int>& facts, int ghostSize) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<int,int> > inp;
+ convertPyToVectorPairInt(fineLocInCoarse,inp);
+ MEDCouplingIMesh::SpreadCoarseToFineGhostZone(coarseDA,coarseSt,fineDA,inp,facts,ghostSize);
+ }
+
std::string __str__() const throw(INTERP_KERNEL::Exception)
{
return self->simpleRepr();
void setStartTime(double val, int iteration, int order) throw(INTERP_KERNEL::Exception);
void setEndTime(double val, int iteration, int order) throw(INTERP_KERNEL::Exception);
void applyLin(double a, double b, int compoId) throw(INTERP_KERNEL::Exception);
+ void applyLin(double a, double b) throw(INTERP_KERNEL::Exception);
int getNumberOfComponents() const throw(INTERP_KERNEL::Exception);
int getNumberOfTuples() const throw(INTERP_KERNEL::Exception);
int getNumberOfValues() const throw(INTERP_KERNEL::Exception);
}
};
- class MEDCouplingAHOGPatch : public RefCountObject
+ class MEDCouplingCartesianAMRMesh;
+
+ class MEDCouplingCartesianAMRPatchGen : public RefCountObject
{
public:
int getNumberOfCellsRecursiveWithOverlap() const throw(INTERP_KERNEL::Exception);
int getNumberOfCellsRecursiveWithoutOverlap() const throw(INTERP_KERNEL::Exception);
int getMaxNumberOfLevelsRelativeToThis() const throw(INTERP_KERNEL::Exception);
+ %extend
+ {
+ MEDCouplingCartesianAMRMeshGen *getMesh() const throw(INTERP_KERNEL::Exception)
+ {
+ MEDCouplingCartesianAMRMeshGen *ret(const_cast<MEDCouplingCartesianAMRMeshGen *>(self->getMesh()));
+ if(ret)
+ ret->incrRef();
+ return ret;
+ }
+ }
+ };
+
+ class MEDCouplingCartesianAMRPatch : public MEDCouplingCartesianAMRPatchGen
+ {
+ public:
int getNumberOfOverlapedCellsForFather() const throw(INTERP_KERNEL::Exception);
+ bool isInMyNeighborhood(const MEDCouplingCartesianAMRPatch *other, int ghostLev) const throw(INTERP_KERNEL::Exception);
%extend
{
PyObject *getBLTRRange() const throw(INTERP_KERNEL::Exception)
return convertFromVectorPairInt(ret);
}
- const MEDCouplingAHOGMesh *getMesh() const throw(INTERP_KERNEL::Exception)
- {
- MEDCouplingAHOGMesh *ret(const_cast<MEDCouplingAHOGMesh *>(self->getMesh()));
- if(ret)
- ret->incrRef();
- return ret;
- }
-
- void addPatch(PyObject *bottomLeftTopRight, int factor) throw(INTERP_KERNEL::Exception)
+ void addPatch(PyObject *bottomLeftTopRight, const std::vector<int>& factors) throw(INTERP_KERNEL::Exception)
{
std::vector< std::pair<int,int> > inp;
convertPyToVectorPairInt(bottomLeftTopRight,inp);
- self->addPatch(inp,factor);
+ self->addPatch(inp,factors);
}
- MEDCouplingAHOGPatch *__getitem__(int patchId) const throw(INTERP_KERNEL::Exception)
+ MEDCouplingCartesianAMRPatch *__getitem__(int patchId) const throw(INTERP_KERNEL::Exception)
{
- const MEDCouplingAHOGMesh *mesh(self->getMesh());
+ const MEDCouplingCartesianAMRMeshGen *mesh(self->getMesh());
if(!mesh)
- throw INTERP_KERNEL::Exception("wrap MEDCouplingAHOGPatch.__getitem__ : no underlying mesh !");
+ throw INTERP_KERNEL::Exception("wrap MEDCouplingCartesianAMRPatchGen.__getitem__ : no underlying mesh !");
if(patchId==mesh->getNumberOfPatches())
{
std::ostringstream oss;
PyErr_SetString(PyExc_StopIteration,oss.str().c_str());
return 0;
}
- MEDCouplingAHOGPatch *ret(const_cast<MEDCouplingAHOGPatch *>(mesh->getPatch(patchId)));
+ MEDCouplingCartesianAMRPatch *ret(const_cast<MEDCouplingCartesianAMRPatch *>(mesh->getPatch(patchId)));
if(ret)
ret->incrRef();
return ret;
}
+ void __delitem__(int patchId) throw(INTERP_KERNEL::Exception)
+ {
+ MEDCouplingCartesianAMRMeshGen *mesh(const_cast<MEDCouplingCartesianAMRMeshGen *>(self->getMesh()));
+ if(!mesh)
+ throw INTERP_KERNEL::Exception("wrap MEDCouplingCartesianAMRPatch.__delitem__ : no underlying mesh !");
+ mesh->removePatch(patchId);
+ }
+
int __len__() const throw(INTERP_KERNEL::Exception)
{
- const MEDCouplingAHOGMesh *mesh(self->getMesh());
+ const MEDCouplingCartesianAMRMeshGen *mesh(self->getMesh());
if(!mesh)
- throw INTERP_KERNEL::Exception("wrap MEDCouplingAHOGPatch.__len__ : no underlying mesh !");
+ throw INTERP_KERNEL::Exception("wrap MEDCouplingCartesianAMRPatch.__len__ : no underlying mesh !");
return mesh->getNumberOfPatches();
}
}
};
+
+ class MEDCouplingCartesianAMRPatchGF : public MEDCouplingCartesianAMRPatchGen
+ {
+ };
+
+ class MEDCouplingDataForGodFather : public RefCountObject
+ {
+ public:
+ virtual void synchronizeFineToCoarse(int ghostLev) throw(INTERP_KERNEL::Exception);
+ virtual void synchronizeCoarseToFine(int ghostLev) throw(INTERP_KERNEL::Exception);
+ virtual void synchronizeCoarseToFineOnlyInGhostZone(int ghostLev) throw(INTERP_KERNEL::Exception);
+ virtual void synchronizeFineEachOtherInGhostZone(int ghostLev) throw(INTERP_KERNEL::Exception);
+ virtual void alloc(int ghostLev) throw(INTERP_KERNEL::Exception);
+ virtual void dealloc() throw(INTERP_KERNEL::Exception);
+ };
- class MEDCouplingAHOGMesh : public RefCountObject, public TimeLabel
+ class MEDCouplingCartesianAMRMeshGen : public RefCountObject, public TimeLabel
{
public:
-
+ int getAbsoluteLevel() const throw(INTERP_KERNEL::Exception);
int getSpaceDimension() const throw(INTERP_KERNEL::Exception);
+ const std::vector<int>& getFactors() const throw(INTERP_KERNEL::Exception);
+ void setFactors(const std::vector<int>& newFactors) throw(INTERP_KERNEL::Exception);
int getMaxNumberOfLevelsRelativeToThis() const throw(INTERP_KERNEL::Exception);
int getNumberOfCellsAtCurrentLevel() const throw(INTERP_KERNEL::Exception);
+ int getNumberOfCellsAtCurrentLevelGhost(int ghostLev) const throw(INTERP_KERNEL::Exception);
int getNumberOfCellsRecursiveWithOverlap() const throw(INTERP_KERNEL::Exception);
int getNumberOfCellsRecursiveWithoutOverlap() const throw(INTERP_KERNEL::Exception);
+ bool isPatchInNeighborhoodOf(int patchId1, int patchId2, int ghostLev) const throw(INTERP_KERNEL::Exception);
//
- int getNumberOfPatches() const throw(INTERP_KERNEL::Exception);
+ int getNumberOfPatches() const throw(INTERP_KERNEL::Exception);
+ int getPatchIdFromChildMesh(const MEDCouplingCartesianAMRMeshGen *mesh) const throw(INTERP_KERNEL::Exception);
MEDCouplingUMesh *buildUnstructured() const throw(INTERP_KERNEL::Exception);
+ DataArrayDouble *extractGhostFrom(int ghostSz, const DataArrayDouble *arr) const throw(INTERP_KERNEL::Exception);
+ std::vector<int> getPatchIdsInTheNeighborhoodOf(int patchId, int ghostLev) const throw(INTERP_KERNEL::Exception);
+ MEDCoupling1SGTUMesh *buildMeshFromPatchEnvelop() const throw(INTERP_KERNEL::Exception);
+ MEDCoupling1SGTUMesh *buildMeshOfDirectChildrenOnly() const throw(INTERP_KERNEL::Exception);
+ void removeAllPatches() throw(INTERP_KERNEL::Exception);
+ void removePatch(int patchId) throw(INTERP_KERNEL::Exception);
+ void detachFromFather() throw(INTERP_KERNEL::Exception);
+ void createPatchesFromCriterion(const INTERP_KERNEL::BoxSplittingOptions& bso, const DataArrayByte *criterion, const std::vector<int>& factors) throw(INTERP_KERNEL::Exception);
+ DataArrayDouble *createCellFieldOnPatch(int patchId, const DataArrayDouble *cellFieldOnThis) const throw(INTERP_KERNEL::Exception);
+ void fillCellFieldOnPatch(int patchId, const DataArrayDouble *cellFieldOnThis, DataArrayDouble *cellFieldOnPatch) const throw(INTERP_KERNEL::Exception);
+ void fillCellFieldOnPatchGhost(int patchId, const DataArrayDouble *cellFieldOnThis, DataArrayDouble *cellFieldOnPatch, int ghostLev) const throw(INTERP_KERNEL::Exception);
+ void fillCellFieldOnPatchOnlyOnGhostZone(int patchId, const DataArrayDouble *cellFieldOnThis, DataArrayDouble *cellFieldOnPatch, int ghostLev) const throw(INTERP_KERNEL::Exception);
+ void fillCellFieldComingFromPatch(int patchId, const DataArrayDouble *cellFieldOnPatch, DataArrayDouble *cellFieldOnThis) const throw(INTERP_KERNEL::Exception);
+ void fillCellFieldComingFromPatchGhost(int patchId, const DataArrayDouble *cellFieldOnPatch, DataArrayDouble *cellFieldOnThis, int ghostLev) const throw(INTERP_KERNEL::Exception);
+ DataArrayInt *findPatchesInTheNeighborhoodOf(int patchId, int ghostLev) const throw(INTERP_KERNEL::Exception);
%extend
{
- static MEDCouplingAHOGMesh *New(const std::string& meshName, int spaceDim, PyObject *nodeStrct, PyObject *origin, PyObject *dxyz) throw(INTERP_KERNEL::Exception)
+ void addPatch(PyObject *bottomLeftTopRight, const std::vector<int>& factors) throw(INTERP_KERNEL::Exception)
{
- static const char msg0[]="MEDCouplingAHOGMesh::New : error on 'origin' parameter !";
- static const char msg1[]="MEDCouplingAHOGMesh::New : error on 'dxyz' parameter !";
- const int *nodeStrctPtr(0);
- const double *originPtr(0),*dxyzPtr(0);
- int sw,sz,val0;
- std::vector<int> bb0;
- nodeStrctPtr=convertObjToPossibleCpp1_Safe(nodeStrct,sw,sz,val0,bb0);
- //
- double val,val2;
- std::vector<double> bb,bb2;
- int sz1,sz2;
- originPtr=convertObjToPossibleCpp5_SingleCompo(origin,sw,val,bb,msg0,false,sz1);
- dxyzPtr=convertObjToPossibleCpp5_SingleCompo(dxyz,sw,val2,bb2,msg1,false,sz2);
- //
- return MEDCouplingAHOGMesh::New(meshName,spaceDim,nodeStrctPtr,nodeStrctPtr+sz,originPtr,originPtr+sz1,dxyzPtr,dxyzPtr+sz2);
+ std::vector< std::pair<int,int> > inp;
+ convertPyToVectorPairInt(bottomLeftTopRight,inp);
+ self->addPatch(inp,factors);
}
- MEDCouplingAHOGMesh(const std::string& meshName, int spaceDim, PyObject *nodeStrct, PyObject *origin, PyObject *dxyz) throw(INTERP_KERNEL::Exception)
+ PyObject *getPatches() const throw(INTERP_KERNEL::Exception)
{
- return ParaMEDMEM_MEDCouplingAHOGMesh_New(meshName,spaceDim,nodeStrct,origin,dxyz);
+ std::vector< const MEDCouplingCartesianAMRPatch *> ps(self->getPatches());
+ int sz(ps.size());
+ PyObject *ret = PyList_New(sz);
+ for(int i=0;i<sz;i++)
+ {
+ MEDCouplingCartesianAMRPatch *elt(const_cast<MEDCouplingCartesianAMRPatch *>(ps[i]));
+ if(elt)
+ elt->incrRef();
+ PyList_SetItem(ret,i,convertCartesianAMRPatch(elt, SWIG_POINTER_OWN | 0 ));
+ }
+ return ret;
}
- void addPatch(PyObject *bottomLeftTopRight, int factor) throw(INTERP_KERNEL::Exception)
+ PyObject *retrieveGridsAt(int absoluteLev) const throw(INTERP_KERNEL::Exception)
{
- std::vector< std::pair<int,int> > inp;
- convertPyToVectorPairInt(bottomLeftTopRight,inp);
- self->addPatch(inp,factor);
+ std::vector<MEDCouplingCartesianAMRPatchGen *> ps(self->retrieveGridsAt(absoluteLev));
+ int sz(ps.size());
+ PyObject *ret = PyList_New(sz);
+ for(int i=0;i<sz;i++)
+ PyList_SetItem(ret,i,convertCartesianAMRPatch(ps[i], SWIG_POINTER_OWN | 0 ));
+ return ret;
+ }
+
+ MEDCouplingFieldDouble *buildCellFieldOnRecurseWithoutOverlapWithoutGhost(int ghostSz, PyObject *recurseArrs) const
+ {
+ std::vector<const DataArrayDouble *> inp;
+ convertFromPyObjVectorOfObj<const ParaMEDMEM::DataArrayDouble *>(recurseArrs,SWIGTYPE_p_ParaMEDMEM__DataArrayDouble,"DataArrayDouble",inp);
+ return self->buildCellFieldOnRecurseWithoutOverlapWithoutGhost(ghostSz,inp);
}
- MEDCouplingAHOGMesh *getFather() const throw(INTERP_KERNEL::Exception)
+ MEDCouplingCartesianAMRMeshGen *getFather() const throw(INTERP_KERNEL::Exception)
{
- MEDCouplingAHOGMesh *ret(const_cast<MEDCouplingAHOGMesh *>(self->getFather()));
+ MEDCouplingCartesianAMRMeshGen *ret(const_cast<MEDCouplingCartesianAMRMeshGen *>(self->getFather()));
if(ret)
ret->incrRef();
return ret;
}
- MEDCouplingAHOGMesh *getGodFather() const throw(INTERP_KERNEL::Exception)
+ MEDCouplingCartesianAMRMeshGen *getGodFather() const throw(INTERP_KERNEL::Exception)
{
- MEDCouplingAHOGMesh *ret(const_cast<MEDCouplingAHOGMesh *>(self->getGodFather()));
+ MEDCouplingCartesianAMRMeshGen *ret(const_cast<MEDCouplingCartesianAMRMeshGen *>(self->getGodFather()));
if(ret)
ret->incrRef();
return ret;
}
- MEDCouplingAHOGPatch *getPatch(int patchId) const throw(INTERP_KERNEL::Exception)
+ MEDCouplingCartesianAMRPatch *getPatch(int patchId) const throw(INTERP_KERNEL::Exception)
{
- MEDCouplingAHOGPatch *ret(const_cast<MEDCouplingAHOGPatch *>(self->getPatch(patchId)));
+ MEDCouplingCartesianAMRPatch *ret(const_cast<MEDCouplingCartesianAMRPatch *>(self->getPatch(patchId)));
if(ret)
ret->incrRef();
return ret;
}
- MEDCouplingAHOGPatch *__getitem__(int patchId) const throw(INTERP_KERNEL::Exception)
+ MEDCouplingIMesh *getImageMesh() const throw(INTERP_KERNEL::Exception)
+ {
+ const MEDCouplingIMesh *ret(self->getImageMesh());
+ if(ret)
+ ret->incrRef();
+ return const_cast<MEDCouplingIMesh *>(ret);
+ }
+
+ MEDCouplingCartesianAMRPatch *__getitem__(int patchId) const throw(INTERP_KERNEL::Exception)
{
if(patchId==self->getNumberOfPatches())
{
PyErr_SetString(PyExc_StopIteration,oss.str().c_str());
return 0;
}
- MEDCouplingAHOGPatch *ret(const_cast<MEDCouplingAHOGPatch *>(self->getPatch(patchId)));
+ MEDCouplingCartesianAMRPatch *ret(const_cast<MEDCouplingCartesianAMRPatch *>(self->getPatch(patchId)));
if(ret)
ret->incrRef();
return ret;
}
+ void fillCellFieldOnPatchGhostAdv(int patchId, const DataArrayDouble *cellFieldOnThis, int ghostLev, PyObject *arrsOnPatches) const throw(INTERP_KERNEL::Exception)
+ {
+ std::vector<const ParaMEDMEM::DataArrayDouble *> arrsOnPatches2;
+ convertFromPyObjVectorOfObj<const ParaMEDMEM::DataArrayDouble *>(arrsOnPatches,SWIGTYPE_p_ParaMEDMEM__DataArrayDouble,"DataArrayDouble",arrsOnPatches2);
+ self->fillCellFieldOnPatchGhostAdv(patchId,cellFieldOnThis,ghostLev,arrsOnPatches2);
+ }
+
+ void fillCellFieldOnPatchOnlyGhostAdv(int patchId, int ghostLev, PyObject *arrsOnPatches) const
+ {
+ std::vector<const ParaMEDMEM::DataArrayDouble *> arrsOnPatches2;
+ convertFromPyObjVectorOfObj<const ParaMEDMEM::DataArrayDouble *>(arrsOnPatches,SWIGTYPE_p_ParaMEDMEM__DataArrayDouble,"DataArrayDouble",arrsOnPatches2);
+ self->fillCellFieldOnPatchOnlyGhostAdv(patchId,ghostLev,arrsOnPatches2);
+ }
+
+ void __delitem__(int patchId) throw(INTERP_KERNEL::Exception)
+ {
+ self->removePatch(patchId);
+ }
+
int __len__() const throw(INTERP_KERNEL::Exception)
{
return self->getNumberOfPatches();
}
}
};
+
+ class MEDCouplingCartesianAMRMeshSub : public MEDCouplingCartesianAMRMeshGen
+ {
+ };
+
+ class MEDCouplingCartesianAMRMesh : public MEDCouplingCartesianAMRMeshGen
+ {
+ public:
+ void setData(MEDCouplingDataForGodFather *data) throw(INTERP_KERNEL::Exception);
+ void allocData(int ghostLev) const throw(INTERP_KERNEL::Exception);
+ void deallocData() const throw(INTERP_KERNEL::Exception);
+ %extend
+ {
+ static MEDCouplingCartesianAMRMesh *New(const std::string& meshName, int spaceDim, PyObject *nodeStrct, PyObject *origin, PyObject *dxyz) throw(INTERP_KERNEL::Exception)
+ {
+ static const char msg0[]="MEDCouplingCartesianAMRMesh::New : error on 'origin' parameter !";
+ static const char msg1[]="MEDCouplingCartesianAMRMesh::New : error on 'dxyz' parameter !";
+ const int *nodeStrctPtr(0);
+ const double *originPtr(0),*dxyzPtr(0);
+ int sw,sz,val0;
+ std::vector<int> bb0;
+ nodeStrctPtr=convertObjToPossibleCpp1_Safe(nodeStrct,sw,sz,val0,bb0);
+ //
+ double val,val2;
+ std::vector<double> bb,bb2;
+ int sz1,sz2;
+ originPtr=convertObjToPossibleCpp5_SingleCompo(origin,sw,val,bb,msg0,false,sz1);
+ dxyzPtr=convertObjToPossibleCpp5_SingleCompo(dxyz,sw,val2,bb2,msg1,false,sz2);
+ //
+ return MEDCouplingCartesianAMRMesh::New(meshName,spaceDim,nodeStrctPtr,nodeStrctPtr+sz,originPtr,originPtr+sz1,dxyzPtr,dxyzPtr+sz2);
+ }
+
+ MEDCouplingCartesianAMRMesh(const std::string& meshName, int spaceDim, PyObject *nodeStrct, PyObject *origin, PyObject *dxyz) throw(INTERP_KERNEL::Exception)
+ {
+ return ParaMEDMEM_MEDCouplingCartesianAMRMesh_New(meshName,spaceDim,nodeStrct,origin,dxyz);
+ }
+
+ MEDCouplingDataForGodFather *getDataConst() const throw(INTERP_KERNEL::Exception)
+ {
+ const MEDCouplingDataForGodFather *ret(self->getDataConst());
+ if(ret)
+ ret->incrRef();
+ return const_cast<MEDCouplingDataForGodFather *>(ret);
+ }
+
+ MEDCouplingDataForGodFather *getData() throw(INTERP_KERNEL::Exception)
+ {
+ MEDCouplingDataForGodFather *ret(self->getData());
+ if(ret)
+ ret->incrRef();
+ return ret;
+ }
+ }
+ };
+
+ class MEDCouplingAMRAttribute : public MEDCouplingDataForGodFather, public TimeLabel
+ {
+ public:
+ MEDCouplingFieldDouble *buildCellFieldOnRecurseWithoutOverlapWithoutGhost(int ghostLev, MEDCouplingCartesianAMRMeshGen *mesh, const std::string& fieldName) const throw(INTERP_KERNEL::Exception);
+ MEDCouplingFieldDouble *buildCellFieldOnWithGhost(int ghostLev, MEDCouplingCartesianAMRMeshGen *mesh, const std::string& fieldName) const throw(INTERP_KERNEL::Exception);
+ bool changeGodFather(MEDCouplingCartesianAMRMesh *gf) throw(INTERP_KERNEL::Exception);
+ %extend
+ {
+ static MEDCouplingAMRAttribute *New(MEDCouplingCartesianAMRMesh *gf, PyObject *fieldNames) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::pair<std::string,int> > fieldNamesCpp0;
+ std::vector< std::pair<std::string, std::vector<std::string> > > fieldNamesCpp1;
+ MEDCouplingAMRAttribute *ret(0);
+ try
+ {
+ convertPyToVectorPairStringInt(fieldNames,fieldNamesCpp0);
+ ret=MEDCouplingAMRAttribute::New(gf,fieldNamesCpp0);
+ }
+ catch(INTERP_KERNEL::Exception&)
+ {
+ convertPyToVectorPairStringVecString(fieldNames,fieldNamesCpp1);
+ ret=MEDCouplingAMRAttribute::New(gf,fieldNamesCpp1);
+ }
+ return ret;
+ }
+
+ MEDCouplingAMRAttribute(MEDCouplingCartesianAMRMesh *gf, PyObject *fieldNames) throw(INTERP_KERNEL::Exception)
+ {
+ return ParaMEDMEM_MEDCouplingAMRAttribute_New(gf,fieldNames);
+ }
+
+ DataArrayDouble *getFieldOn(MEDCouplingCartesianAMRMeshGen *mesh, const std::string& fieldName) const throw(INTERP_KERNEL::Exception)
+ {
+ const DataArrayDouble *ret(self->getFieldOn(mesh,fieldName));
+ DataArrayDouble *ret2(const_cast<DataArrayDouble *>(ret));
+ if(ret2)
+ ret2->incrRef();
+ return ret2;
+ }
+
+ void spillInfoOnComponents(PyObject *compNames) throw(INTERP_KERNEL::Exception)
+ {
+ std::vector< std::vector<std::string> > compNamesCpp;
+ convertPyToVectorOfVectorOfString(compNames,compNamesCpp);
+ self->spillInfoOnComponents(compNamesCpp);
+ }
+
+ PyObject *retrieveFieldsOn(MEDCouplingCartesianAMRMeshGen *mesh) const throw(INTERP_KERNEL::Exception)
+ {
+ std::vector<DataArrayDouble *> ret(self->retrieveFieldsOn(mesh));
+ int sz((int)ret.size());
+ PyObject *retPy(PyList_New(sz));
+ for(int i=0;i<sz;i++)
+ PyList_SetItem(retPy,i,SWIG_NewPointerObj(SWIG_as_voidptr(ret[i]),SWIGTYPE_p_ParaMEDMEM__DataArrayDouble, SWIG_POINTER_OWN | 0 ));
+ return retPy;
+ }
+ }
+ };
+
+ class DenseMatrix : public RefCountObject, public TimeLabel
+ {
+ public:
+ static DenseMatrix *New(int nbRows, int nbCols) throw(INTERP_KERNEL::Exception);
+ static DenseMatrix *New(DataArrayDouble *array, int nbRows, int nbCols) throw(INTERP_KERNEL::Exception);
+ DenseMatrix *deepCpy() const throw(INTERP_KERNEL::Exception);
+ DenseMatrix *shallowCpy() const throw(INTERP_KERNEL::Exception);
+ //
+ int getNumberOfRows() const throw(INTERP_KERNEL::Exception);
+ int getNumberOfCols() const throw(INTERP_KERNEL::Exception);
+ int getNbOfElems() const throw(INTERP_KERNEL::Exception);
+ void reBuild(DataArrayDouble *array, int nbRows=-1, int nbCols=-1) throw(INTERP_KERNEL::Exception);
+ void reShape(int nbRows, int nbCols) throw(INTERP_KERNEL::Exception);
+ void transpose() throw(INTERP_KERNEL::Exception);
+ //
+ bool isEqual(const DenseMatrix& other, double eps) const throw(INTERP_KERNEL::Exception);
+ DataArrayDouble *matVecMult(const DataArrayDouble *vec) const throw(INTERP_KERNEL::Exception);
+ static DataArrayDouble *MatVecMult(const DenseMatrix *mat, const DataArrayDouble *vec) throw(INTERP_KERNEL::Exception);
+ %extend
+ {
+ DenseMatrix(int nbRows, int nbCols) throw(INTERP_KERNEL::Exception)
+ {
+ return DenseMatrix::New(nbRows,nbCols);
+ }
+
+ DenseMatrix(DataArrayDouble *array, int nbRows, int nbCols) throw(INTERP_KERNEL::Exception)
+ {
+ return DenseMatrix::New(array,nbRows,nbCols);
+ }
+
+ PyObject *isEqualIfNotWhy(const DenseMatrix& other, double eps) const throw(INTERP_KERNEL::Exception)
+ {
+ std::string ret1;
+ bool ret0=self->isEqualIfNotWhy(other,eps,ret1);
+ PyObject *ret=PyTuple_New(2);
+ PyObject *ret0Py=ret0?Py_True:Py_False;
+ Py_XINCREF(ret0Py);
+ PyTuple_SetItem(ret,0,ret0Py);
+ PyTuple_SetItem(ret,1,PyString_FromString(ret1.c_str()));
+ return ret;
+ }
+
+ DataArrayDouble *getData() throw(INTERP_KERNEL::Exception)
+ {
+ DataArrayDouble *ret(self->getData());
+ if(ret)
+ ret->incrRef();
+ return ret;
+ }
+
+ DenseMatrix *__add__(const DenseMatrix *other) throw(INTERP_KERNEL::Exception)
+ {
+ return ParaMEDMEM::DenseMatrix::Add(self,other);
+ }
+
+ DenseMatrix *__sub__(const DenseMatrix *other) throw(INTERP_KERNEL::Exception)
+ {
+ return ParaMEDMEM::DenseMatrix::Substract(self,other);
+ }
+
+ DenseMatrix *__mul__(const DenseMatrix *other) throw(INTERP_KERNEL::Exception)
+ {
+ return ParaMEDMEM::DenseMatrix::Multiply(self,other);
+ }
+
+ DenseMatrix *__mul__(const DataArrayDouble *other) throw(INTERP_KERNEL::Exception)
+ {
+ return ParaMEDMEM::DenseMatrix::Multiply(self,other);
+ }
+
+ PyObject *___iadd___(PyObject *trueSelf, const DenseMatrix *other) throw(INTERP_KERNEL::Exception)
+ {
+ self->addEqual(other);
+ Py_XINCREF(trueSelf);
+ return trueSelf;
+ }
+
+ PyObject *___isub___(PyObject *trueSelf, const DenseMatrix *other) throw(INTERP_KERNEL::Exception)
+ {
+ self->substractEqual(other);
+ Py_XINCREF(trueSelf);
+ return trueSelf;
+ }
+#ifdef WITH_NUMPY
+ PyObject *toNumPyMatrix() throw(INTERP_KERNEL::Exception) // not const. It is not a bug !
+ {
+ PyObject *obj(ToNumPyArrayUnderground<DataArrayDouble,double>(self->getData(),NPY_DOUBLE,"DataArrayDouble",self->getNumberOfRows(),self->getNumberOfCols()));
+ return obj;
+ }
+#endif
+ }
+ };
}
%pythoncode %{
