-// Copyright (C) 2007-2015 CEA/DEN, EDF R&D
+// Copyright (C) 2007-2016 CEA/DEN, EDF R&D
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
#include "MEDCoupling1GTUMesh.hxx"
#include "MEDCouplingMemArray.txx"
#include "MEDCouplingFieldDouble.hxx"
+#include "MEDCouplingSkyLineArray.hxx"
#include "CellModel.hxx"
#include "VolSurfUser.txx"
#include "InterpolationUtils.hxx"
#include "BBTree.txx"
#include "BBTreeDst.txx"
#include "SplitterTetra.hxx"
+#include "DiameterCalculator.hxx"
#include "DirectedBoundingBox.hxx"
#include "InterpKernelMatrixTools.hxx"
#include "InterpKernelMeshQuality.hxx"
#include <limits>
#include <list>
-using namespace ParaMEDMEM;
+using namespace MEDCoupling;
double MEDCouplingUMesh::EPS_FOR_POLYH_ORIENTATION=1.e-14;
+/// @cond INTERNAL
const INTERP_KERNEL::NormalizedCellType MEDCouplingUMesh::MEDMEM_ORDER[N_MEDMEM_ORDER] = { INTERP_KERNEL::NORM_POINT1, INTERP_KERNEL::NORM_SEG2, INTERP_KERNEL::NORM_SEG3, INTERP_KERNEL::NORM_SEG4, INTERP_KERNEL::NORM_POLYL, INTERP_KERNEL::NORM_TRI3, INTERP_KERNEL::NORM_QUAD4, INTERP_KERNEL::NORM_TRI6, INTERP_KERNEL::NORM_TRI7, INTERP_KERNEL::NORM_QUAD8, INTERP_KERNEL::NORM_QUAD9, INTERP_KERNEL::NORM_POLYGON, INTERP_KERNEL::NORM_QPOLYG, INTERP_KERNEL::NORM_TETRA4, INTERP_KERNEL::NORM_PYRA5, INTERP_KERNEL::NORM_PENTA6, INTERP_KERNEL::NORM_HEXA8, INTERP_KERNEL::NORM_HEXGP12, INTERP_KERNEL::NORM_TETRA10, INTERP_KERNEL::NORM_PYRA13, INTERP_KERNEL::NORM_PENTA15, INTERP_KERNEL::NORM_HEXA20, INTERP_KERNEL::NORM_HEXA27, INTERP_KERNEL::NORM_POLYHED };
+const int MEDCouplingUMesh::MEDCOUPLING2VTKTYPETRADUCER[INTERP_KERNEL::NORM_MAXTYPE+1]={1,3,21,5,9,7,22,34,23,28,-1,-1,-1,-1,10,14,13,-1,12,-1,24,-1,16,27,-1,26,-1,29,-1,-1,25,42,36,4};
+/// @endcond
MEDCouplingUMesh *MEDCouplingUMesh::New()
{
}
/*!
- * Returns a new MEDCouplingMesh which is a full copy of \a this one. No data is shared
+ * Returns a new MEDCouplingUMesh which is a full copy of \a this one. No data is shared
* between \a this and the new mesh.
- * \return MEDCouplingMesh * - a new instance of MEDCouplingMesh. The caller is to
+ * \return MEDCouplingUMesh * - a new instance of MEDCouplingMesh. The caller is to
* delete this mesh using decrRef() as it is no more needed.
*/
-MEDCouplingMesh *MEDCouplingUMesh::deepCpy() const
+MEDCouplingUMesh *MEDCouplingUMesh::deepCopy() const
{
return clone(true);
}
+
/*!
- * Returns a new MEDCouplingMesh which is a copy of \a this one.
+ * Returns a new MEDCouplingUMesh which is a copy of \a this one.
* \param [in] recDeepCpy - if \a true, the copy is deep, else all data arrays of \a
* this mesh are shared by the new mesh.
- * \return MEDCouplingMesh * - a new instance of MEDCouplingMesh. The caller is to
+ * \return MEDCouplingUMesh * - a new instance of MEDCouplingMesh. The caller is to
* delete this mesh using decrRef() as it is no more needed.
*/
MEDCouplingUMesh *MEDCouplingUMesh::clone(bool recDeepCpy) const
}
/*!
- * This method behaves mostly like MEDCouplingUMesh::deepCpy method, except that only nodal connectivity arrays are deeply copied.
+ * This method behaves mostly like MEDCouplingUMesh::deepCopy method, except that only nodal connectivity arrays are deeply copied.
* The coordinates are shared between \a this and the returned instance.
*
* \return MEDCouplingUMesh * - A new object instance holding the copy of \a this (deep for connectivity, shallow for coordiantes)
- * \sa MEDCouplingUMesh::deepCpy
+ * \sa MEDCouplingUMesh::deepCopy
*/
-MEDCouplingPointSet *MEDCouplingUMesh::deepCpyConnectivityOnly() const
+MEDCouplingUMesh *MEDCouplingUMesh::deepCopyConnectivityOnly() const
{
checkConnectivityFullyDefined();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=clone(false);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c(getNodalConnectivity()->deepCpy()),ci(getNodalConnectivityIndex()->deepCpy());
+ MCAuto<MEDCouplingUMesh> ret=clone(false);
+ MCAuto<DataArrayInt> c(getNodalConnectivity()->deepCopy()),ci(getNodalConnectivityIndex()->deepCopy());
ret->setConnectivity(c,ci);
return ret.retn();
}
* \throw If the connectivity index data array has more than one component.
* \throw If the connectivity index data array has a named component.
*/
-void MEDCouplingUMesh::checkCoherency() const
+void MEDCouplingUMesh::checkConsistencyLight() const
{
if(_mesh_dim<-1)
throw INTERP_KERNEL::Exception("No mesh dimension specified !");
if(_mesh_dim!=-1)
- MEDCouplingPointSet::checkCoherency();
+ MEDCouplingPointSet::checkConsistencyLight();
for(std::set<INTERP_KERNEL::NormalizedCellType>::const_iterator iter=_types.begin();iter!=_types.end();iter++)
{
if((int)INTERP_KERNEL::CellModel::GetCellModel(*iter).getDimension()!=_mesh_dim)
/*!
* Checks if \a this mesh is well defined. If no exception is thrown by this method,
* then \a this mesh is most probably is writable, exchangeable and available for all
- * algorithms. <br> In addition to the checks performed by checkCoherency(), this
+ * algorithms. <br> In addition to the checks performed by checkConsistencyLight(), this
* method thoroughly checks the nodal connectivity.
* \param [in] eps - a not used parameter.
* \throw If the mesh dimension is not set.
* \throw If number of nodes defining an element does not correspond to the type of element.
* \throw If the nodal connectivity includes an invalid node id.
*/
-void MEDCouplingUMesh::checkCoherency1(double eps) const
+void MEDCouplingUMesh::checkConsistency(double eps) const
{
- checkCoherency();
+ checkConsistencyLight();
if(_mesh_dim==-1)
return ;
int meshDim=getMeshDimension();
if((int)cm.getDimension()!=meshDim)
{
std::ostringstream oss;
- oss << "MEDCouplingUMesh::checkCoherency1 : cell << #" << i<< " with type Type " << cm.getRepr() << " in 'this' whereas meshdim == " << meshDim << " !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ oss << "MEDCouplingUMesh::checkConsistency : cell << #" << i<< " with type Type " << cm.getRepr() << " in 'this' whereas meshdim == " << meshDim << " !";
+ throw INTERP_KERNEL::Exception(oss.str());
}
int nbOfNodesInCell=ptrI[i+1]-ptrI[i]-1;
if(!cm.isDynamic())
if(nbOfNodesInCell!=(int)cm.getNumberOfNodes())
{
std::ostringstream oss;
- oss << "MEDCouplingUMesh::checkCoherency1 : cell #" << i << " with static Type '" << cm.getRepr() << "' has " << cm.getNumberOfNodes();
+ oss << "MEDCouplingUMesh::checkConsistency : cell #" << i << " with static Type '" << cm.getRepr() << "' has " << cm.getNumberOfNodes();
oss << " nodes whereas in connectivity there is " << nbOfNodesInCell << " nodes ! Looks very bad !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
+ }
+ if(cm.isQuadratic() && cm.isDynamic() && meshDim == 2)
+ if (nbOfNodesInCell % 2 || nbOfNodesInCell < 4)
+ {
+ std::ostringstream oss;
+ oss << "MEDCouplingUMesh::checkConsistency : cell #" << i << " with quadratic type '" << cm.getRepr() << "' has " << nbOfNodesInCell;
+ oss << " nodes. This should be even, and greater or equal than 4!! Looks very bad!";
+ throw INTERP_KERNEL::Exception(oss.str());
}
for(const int *w=ptr+ptrI[i]+1;w!=ptr+ptrI[i+1];w++)
{
{
if(nodeId>=nbOfNodes)
{
- std::ostringstream oss; oss << "Cell #" << i << " is consituted of node #" << nodeId << " whereas there are only " << nbOfNodes << " nodes !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ std::ostringstream oss; oss << "Cell #" << i << " is built with node #" << nodeId << " whereas there are only " << nbOfNodes << " nodes in the mesh !";
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
else if(nodeId<-1)
{
- std::ostringstream oss; oss << "Cell #" << i << " is consituted of node #" << nodeId << " in connectivity ! sounds bad !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ std::ostringstream oss; oss << "Cell #" << i << " is built with node #" << nodeId << " in connectivity ! sounds bad !";
+ throw INTERP_KERNEL::Exception(oss.str());
}
else
{
if((INTERP_KERNEL::NormalizedCellType)(ptr[ptrI[i]])!=INTERP_KERNEL::NORM_POLYHED)
{
- std::ostringstream oss; oss << "Cell #" << i << " is consituted of node #-1 in connectivity ! sounds bad !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ std::ostringstream oss; oss << "Cell #" << i << " is built with node #-1 in connectivity ! sounds bad !";
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
}
}
}
-
-/*!
- * Checks if \a this mesh is well defined. If no exception is thrown by this method,
- * then \a this mesh is most probably is writable, exchangeable and available for all
- * algorithms. <br> This method performs the same checks as checkCoherency1() does.
- * \param [in] eps - a not used parameter.
- * \throw If the mesh dimension is not set.
- * \throw If the coordinates array is not set (if mesh dimension != -1 ).
- * \throw If \a this mesh contains elements of dimension different from the mesh dimension.
- * \throw If the connectivity data array has more than one component.
- * \throw If the connectivity data array has a named component.
- * \throw If the connectivity index data array has more than one component.
- * \throw If the connectivity index data array has a named component.
- * \throw If number of nodes defining an element does not correspond to the type of element.
- * \throw If the nodal connectivity includes an invalid node id.
- */
-void MEDCouplingUMesh::checkCoherency2(double eps) const
-{
- checkCoherency1(eps);
-}
-
/*!
* Sets dimension of \a this mesh. The mesh dimension in general depends on types of
* elements contained in the mesh. For more info on the mesh dimension see
}
/*!
- * Allocates memory to store an estimation of the given number of cells. Closer is the estimation to the number of cells effectively inserted,
- * less will be the needs to realloc. If the number of cells to be inserted is not known simply put 0 to this parameter.
+ * Allocates memory to store an estimation of the given number of cells. The closer is the estimation to the number of cells effectively inserted,
+ * the less will the library need to reallocate memory. If the number of cells to be inserted is not known simply put 0 to this parameter.
* If a nodal connectivity previouly existed before the call of this method, it will be reset.
*
* \param [in] nbOfCells - estimation of the number of cell \a this mesh will contain.
{
std::ostringstream oss; oss << "MEDCouplingUMesh::insertNextCell : Trying to push a " << cm.getRepr() << " cell with a size of " << size;
oss << " ! Expecting " << cm.getNumberOfNodes() << " !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
int idx=_nodal_connec_index->back();
int val=idx+size+1;
std::ostringstream oss; oss << "MEDCouplingUMesh::insertNextCell : cell type " << cm.getRepr() << " has a dimension " << cm.getDimension();
oss << " whereas Mesh Dimension of current UMesh instance is set to " << _mesh_dim << " ! Please invoke \"setMeshDimension\" method before or invoke ";
oss << "\"MEDCouplingUMesh::New\" static method with 2 parameters name and meshDimension !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
int nbOfCells(getNumberOfCells());
if(nbOfCells==0)
return ret;
- if(getMeshLength()<1)
+ if(getNodalConnectivityArrayLen()<1)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::getAllGeoTypesSorted : the connectivity in this seems invalid !");
const int *c(_nodal_connec->begin()),*ci(_nodal_connec_index->begin());
ret.push_back((INTERP_KERNEL::NormalizedCellType)c[*ci++]);
const INTERP_KERNEL::CellModel& _cm;
};
+class MicroEdgesGenerator2D
+{
+public:
+ MicroEdgesGenerator2D(const INTERP_KERNEL::CellModel& cm):_cm(cm) { }
+ unsigned getNumberOfSons2(const int *conn, int lgth) const { return _cm.getNumberOfMicroEdges(); }
+ unsigned fillSonCellNodalConnectivity2(int sonId, const int *nodalConn, int lgth, int *sonNodalConn, INTERP_KERNEL::NormalizedCellType& typeOfSon) const { return _cm.fillMicroEdgeNodalConnectivity(sonId,nodalConn,sonNodalConn,typeOfSon); }
+ static const int DELTA=1;
+private:
+ const INTERP_KERNEL::CellModel& _cm;
+};
+
+class MicroEdgesGenerator3D
+{
+public:
+ MicroEdgesGenerator3D(const INTERP_KERNEL::CellModel& cm):_cm(cm) { }
+ unsigned getNumberOfSons2(const int *conn, int lgth) const { return _cm.getNumberOfMicroEdges(); }
+ unsigned fillSonCellNodalConnectivity2(int sonId, const int *nodalConn, int lgth, int *sonNodalConn, INTERP_KERNEL::NormalizedCellType& typeOfSon) const { return _cm.fillMicroEdgeNodalConnectivity(sonId,nodalConn,sonNodalConn,typeOfSon); }
+ static const int DELTA=2;
+private:
+ const INTERP_KERNEL::CellModel& _cm;
+};
+
/// @endcond
/*!
* Creates a new MEDCouplingUMesh containing cells, of dimension one less than \a
* this->getMeshDimension(), that bound cells of \a this mesh. In addition arrays
* describing correspondence between cells of \a this and the result meshes are
- * returned. The arrays \a desc and \a descIndx describe the descending connectivity,
+ * returned. The arrays \a desc and \a descIndx (\ref numbering-indirect) describe the descending connectivity,
* i.e. enumerate cells of the result mesh bounding each cell of \a this mesh. The
- * arrays \a revDesc and \a revDescIndx describe the reverse descending connectivity,
+ * arrays \a revDesc and \a revDescIndx (\ref numbering-indirect) describe the reverse descending connectivity,
* i.e. enumerate cells of \a this mesh bounded by each cell of the result mesh.
* \warning For speed reasons, this method does not check if node ids in the nodal
* connectivity correspond to the size of node coordinates array.
return buildDescendingConnectivityGen<MinusTwoSonsGenerator>(desc,descIndx,revDesc,revDescIndx,MEDCouplingFastNbrer);
}
+/*!
+ * This method computes the micro edges constituting each cell in \a this. Micro edge is an edge for non quadratic cells. Micro edge is an half edge for quadratic cells.
+ * This method works for both meshes with mesh dimenstion equal to 2 or 3. Dynamical cells are not supported (polygons, polyhedrons...)
+ *
+ * \sa explode3DMeshTo1D, buildDescendingConnectiviy
+ */
+MEDCouplingUMesh *MEDCouplingUMesh::explodeMeshIntoMicroEdges(DataArrayInt *desc, DataArrayInt *descIndx, DataArrayInt *revDesc, DataArrayInt *revDescIndx) const
+{
+ checkFullyDefined();
+ switch(getMeshDimension())
+ {
+ case 2:
+ return buildDescendingConnectivityGen<MicroEdgesGenerator2D>(desc,descIndx,revDesc,revDescIndx,MEDCouplingFastNbrer);
+ case 3:
+ return buildDescendingConnectivityGen<MicroEdgesGenerator2D>(desc,descIndx,revDesc,revDescIndx,MEDCouplingFastNbrer);
+ default:
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::explodeMeshIntoMicroEdges : Only 2D and 3D supported !");
+ }
+}
+
/*!
* Creates a new MEDCouplingUMesh containing cells, of dimension one less than \a
* this->getMeshDimension(), that bound cells of \a this mesh. In
* addition arrays describing correspondence between cells of \a this and the result
- * meshes are returned. The arrays \a desc and \a descIndx describe the descending
+ * meshes are returned. The arrays \a desc and \a descIndx (\ref numbering-indirect) describe the descending
* connectivity, i.e. enumerate cells of the result mesh bounding each cell of \a this
* mesh. This method differs from buildDescendingConnectivity() in that apart
* from cell ids, \a desc returns mutual orientation of cells in \a this and the
* of two meshes is same, and a negative id means a reverse order of nodes. Since a
* cell with id #0 can't be negative, the array \a desc returns ids in FORTRAN mode,
* i.e. cell ids are one-based.
- * Arrays \a revDesc and \a revDescIndx describe the reverse descending connectivity,
+ * Arrays \a revDesc and \a revDescIndx (\ref numbering-indirect) describe the reverse descending connectivity,
* i.e. enumerate cells of \a this mesh bounded by each cell of the result mesh.
* \warning For speed reasons, this method does not check if node ids in the nodal
* connectivity correspond to the size of node coordinates array.
/*!
* \b WARNING this method do the assumption that connectivity lies on the coordinates set.
- * For speed reasons no check of this will be done. This method calls MEDCouplingUMesh::buildDescendingConnectivity to compute the result.
- * This method lists cell by cell in \b this which are its neighbors. To compute the result only connectivities are considered.
+ * For speed reasons no check of this will be done. This method calls
+ * MEDCouplingUMesh::buildDescendingConnectivity to compute the result.
+ * This method lists cell by cell in \b this which are its neighbors. To compute the result
+ * only connectivities are considered.
* The neighbor cells of cell having id 'cellId' are neighbors[neighborsIndx[cellId]:neighborsIndx[cellId+1]].
+ * The format of return is hence \ref numbering-indirect.
*
- * \param [out] neighbors is an array storing all the neighbors of all cells in \b this. This array is newly allocated and should be dealt by the caller. \b neighborsIndx 2nd output
- * parameter allows to select the right part in this array. The number of tuples is equal to the last values in \b neighborsIndx.
- * \param [out] neighborsIndx is an array of size this->getNumberOfCells()+1 newly allocated and should be dealt by the caller. This arrays allow to use the first output parameter \b neighbors.
+ * \param [out] neighbors is an array storing all the neighbors of all cells in \b this. This array is newly
+ * allocated and should be dealt by the caller. \b neighborsIndx 2nd output
+ * parameter allows to select the right part in this array (\ref numbering-indirect). The number of tuples
+ * is equal to the last values in \b neighborsIndx.
+ * \param [out] neighborsIndx is an array of size this->getNumberOfCells()+1 newly allocated and should be
+ * dealt by the caller. This arrays allow to use the first output parameter \b neighbors (\ref numbering-indirect).
*/
void MEDCouplingUMesh::computeNeighborsOfCells(DataArrayInt *&neighbors, DataArrayInt *&neighborsIndx) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> descIndx=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDesc=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDescIndx=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> meshDM1=buildDescendingConnectivity(desc,descIndx,revDesc,revDescIndx);
+ MCAuto<DataArrayInt> desc=DataArrayInt::New();
+ MCAuto<DataArrayInt> descIndx=DataArrayInt::New();
+ MCAuto<DataArrayInt> revDesc=DataArrayInt::New();
+ MCAuto<DataArrayInt> revDescIndx=DataArrayInt::New();
+ MCAuto<MEDCouplingUMesh> meshDM1=buildDescendingConnectivity(desc,descIndx,revDesc,revDescIndx);
meshDM1=0;
ComputeNeighborsOfCellsAdv(desc,descIndx,revDesc,revDescIndx,neighbors,neighborsIndx);
}
/*!
- * This method is called by MEDCouplingUMesh::computeNeighborsOfCells. This methods performs the algorithm of MEDCouplingUMesh::computeNeighborsOfCells.
- * This method is useful for users that want to reduce along a criterion the set of neighbours cell. This is typically the case to extract a set a neighbours,
+ * This method is called by MEDCouplingUMesh::computeNeighborsOfCells. This methods performs the algorithm
+ * of MEDCouplingUMesh::computeNeighborsOfCells.
+ * This method is useful for users that want to reduce along a criterion the set of neighbours cell. This is
+ * typically the case to extract a set a neighbours,
* excluding a set of meshdim-1 cells in input descending connectivity.
- * Typically \b desc, \b descIndx, \b revDesc and \b revDescIndx input params are the result of MEDCouplingUMesh::buildDescendingConnectivity.
- * This method lists cell by cell in \b this which are its neighbors. To compute the result only connectivities are considered.
+ * Typically \b desc, \b descIndx, \b revDesc and \b revDescIndx (\ref numbering-indirect) input params are
+ * the result of MEDCouplingUMesh::buildDescendingConnectivity.
+ * This method lists cell by cell in \b this which are its neighbors. To compute the result only connectivities
+ * are considered.
* The neighbor cells of cell having id 'cellId' are neighbors[neighborsIndx[cellId]:neighborsIndx[cellId+1]].
*
* \param [in] desc descending connectivity array.
- * \param [in] descIndx descending connectivity index array used to walk through \b desc.
+ * \param [in] descIndx descending connectivity index array used to walk through \b desc (\ref numbering-indirect).
* \param [in] revDesc reverse descending connectivity array.
- * \param [in] revDescIndx reverse descending connectivity index array used to walk through \b revDesc.
+ * \param [in] revDescIndx reverse descending connectivity index array used to walk through \b revDesc (\ref numbering-indirect).
* \param [out] neighbors is an array storing all the neighbors of all cells in \b this. This array is newly allocated and should be dealt by the caller. \b neighborsIndx 2nd output
* parameter allows to select the right part in this array. The number of tuples is equal to the last values in \b neighborsIndx.
* \param [out] neighborsIndx is an array of size this->getNumberOfCells()+1 newly allocated and should be dealt by the caller. This arrays allow to use the first output parameter \b neighbors.
const int *revDescIPtr=revDescIndx->getConstPointer();
//
int nbCells=descIndx->getNumberOfTuples()-1;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> out0=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> out1=DataArrayInt::New(); out1->alloc(nbCells+1,1);
+ MCAuto<DataArrayInt> out0=DataArrayInt::New();
+ MCAuto<DataArrayInt> out1=DataArrayInt::New(); out1->alloc(nbCells+1,1);
int *out1Ptr=out1->getPointer();
*out1Ptr++=0;
out0->reserve(desc->getNumberOfTuples());
/*!
* \b WARNING this method do the assumption that connectivity lies on the coordinates set.
- * For speed reasons no check of this will be done. This method calls MEDCouplingUMesh::buildDescendingConnectivity to compute the result.
- * This method lists node by node in \b this which are its neighbors. To compute the result only connectivities are considered.
+ * For speed reasons no check of this will be done. This method calls
+ * MEDCouplingUMesh::buildDescendingConnectivity to compute the result.
+ * This method lists node by node in \b this which are its neighbors. To compute the result
+ * only connectivities are considered.
* The neighbor nodes of node having id 'nodeId' are neighbors[neighborsIndx[cellId]:neighborsIndx[cellId+1]].
*
- * \param [out] neighbors is an array storing all the neighbors of all nodes in \b this. This array is newly allocated and should be dealt by the caller. \b neighborsIndx 2nd output
- * parameter allows to select the right part in this array. The number of tuples is equal to the last values in \b neighborsIndx.
- * \param [out] neighborsIndx is an array of size this->getNumberOfCells()+1 newly allocated and should be dealt by the caller. This arrays allow to use the first output parameter \b neighbors.
+ * \param [out] neighbors is an array storing all the neighbors of all nodes in \b this. This array
+ * is newly allocated and should be dealt by the caller. \b neighborsIndx 2nd output
+ * parameter allows to select the right part in this array (\ref numbering-indirect).
+ * The number of tuples is equal to the last values in \b neighborsIndx.
+ * \param [out] neighborsIdx is an array of size this->getNumberOfCells()+1 newly allocated and should
+ * be dealt by the caller. This arrays allow to use the first output parameter \b neighbors.
*/
void MEDCouplingUMesh::computeNeighborsOfNodes(DataArrayInt *&neighbors, DataArrayInt *&neighborsIdx) const
{
checkFullyDefined();
int mdim(getMeshDimension()),nbNodes(getNumberOfNodes());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc(DataArrayInt::New()),descIndx(DataArrayInt::New()),revDesc(DataArrayInt::New()),revDescIndx(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mesh1D;
+ MCAuto<DataArrayInt> desc(DataArrayInt::New()),descIndx(DataArrayInt::New()),revDesc(DataArrayInt::New()),revDescIndx(DataArrayInt::New());
+ MCAuto<MEDCouplingUMesh> mesh1D;
switch(mdim)
{
case 3:
}
desc=DataArrayInt::New(); descIndx=DataArrayInt::New(); revDesc=0; revDescIndx=0;
mesh1D->getReverseNodalConnectivity(desc,descIndx);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret0(DataArrayInt::New());
+ MCAuto<DataArrayInt> ret0(DataArrayInt::New());
ret0->alloc(desc->getNumberOfTuples(),1);
int *r0Pt(ret0->getPointer());
const int *c1DPtr(mesh1D->getNodalConnectivity()->begin()),*rn(desc->begin()),*rni(descIndx->begin());
checkConnectivityFullyDefined();
int nbOfCells=getNumberOfCells();
int nbOfNodes=getNumberOfNodes();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revNodalIndx=DataArrayInt::New(); revNodalIndx->alloc(nbOfNodes+1,1); revNodalIndx->fillWithZero();
+ MCAuto<DataArrayInt> revNodalIndx=DataArrayInt::New(); revNodalIndx->alloc(nbOfNodes+1,1); revNodalIndx->fillWithZero();
int *revNodalIndxPtr=revNodalIndx->getPointer();
const int *conn=_nodal_connec->getConstPointer();
const int *connIndex=_nodal_connec_index->getConstPointer();
std::string name="Mesh constituent of "; name+=getName();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(name,getMeshDimension()-SonsGenerator::DELTA);
+ MCAuto<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(name,getMeshDimension()-SonsGenerator::DELTA);
ret->setCoords(getCoords());
ret->allocateCells(2*nbOfCells);
descIndx->alloc(nbOfCells+1,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDesc2(DataArrayInt::New()); revDesc2->reserve(2*nbOfCells);
+ MCAuto<DataArrayInt> revDesc2(DataArrayInt::New()); revDesc2->reserve(2*nbOfCells);
int *descIndxPtr=descIndx->getPointer(); *descIndxPtr++=0;
for(int eltId=0;eltId<nbOfCells;eltId++,descIndxPtr++)
{
}
int nbOfCellsM1=ret->getNumberOfCells();
std::transform(revNodalIndxPtr+1,revNodalIndxPtr+nbOfNodes+1,revNodalIndxPtr,revNodalIndxPtr+1,std::plus<int>());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revNodal=DataArrayInt::New(); revNodal->alloc(revNodalIndx->back(),1);
+ MCAuto<DataArrayInt> revNodal=DataArrayInt::New(); revNodal->alloc(revNodalIndx->back(),1);
std::fill(revNodal->getPointer(),revNodal->getPointer()+revNodalIndx->back(),-1);
int *revNodalPtr=revNodal->getPointer();
const int *connM1=ret->getNodalConnectivity()->getConstPointer();
//
DataArrayInt *commonCells=0,*commonCellsI=0;
FindCommonCellsAlg(3,0,ret->getNodalConnectivity(),ret->getNodalConnectivityIndex(),revNodal,revNodalIndx,commonCells,commonCellsI);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> commonCellsTmp(commonCells),commonCellsITmp(commonCellsI);
+ MCAuto<DataArrayInt> commonCellsTmp(commonCells),commonCellsITmp(commonCellsI);
const int *commonCellsPtr(commonCells->getConstPointer()),*commonCellsIPtr(commonCellsI->getConstPointer());
int newNbOfCellsM1=-1;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> o2nM1=DataArrayInt::BuildOld2NewArrayFromSurjectiveFormat2(nbOfCellsM1,commonCells->begin(),
+ MCAuto<DataArrayInt> o2nM1=DataArrayInt::ConvertIndexArrayToO2N(nbOfCellsM1,commonCells->begin(),
commonCellsI->begin(),commonCellsI->end(),newNbOfCellsM1);
std::vector<bool> isImpacted(nbOfCellsM1,false);
for(const int *work=commonCellsI->begin();work!=commonCellsI->end()-1;work++)
for(int work2=work[0];work2!=work[1];work2++)
isImpacted[commonCellsPtr[work2]]=true;
const int *o2nM1Ptr=o2nM1->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> n2oM1=o2nM1->invertArrayO2N2N2OBis(newNbOfCellsM1);
+ MCAuto<DataArrayInt> n2oM1=o2nM1->invertArrayO2N2N2OBis(newNbOfCellsM1);
const int *n2oM1Ptr=n2oM1->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret2=static_cast<MEDCouplingUMesh *>(ret->buildPartOfMySelf(n2oM1->begin(),n2oM1->end(),true));
+ MCAuto<MEDCouplingUMesh> ret2=static_cast<MEDCouplingUMesh *>(ret->buildPartOfMySelf(n2oM1->begin(),n2oM1->end(),true));
ret2->copyTinyInfoFrom(this);
desc->alloc(descIndx->back(),1);
int *descPtr=desc->getPointer();
{
std::ostringstream oss; oss << "MEDCouplingUMesh::convertToPolyTypes : On rank #" << std::distance(cellIdsToConvertBg,iter) << " value is " << *iter << " which is not";
oss << " in range [0," << nbOfCells << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
}
{
int *connIndex(_nodal_connec_index->getPointer());
const int *connOld(_nodal_connec->getConstPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> connNew(DataArrayInt::New()),connNewI(DataArrayInt::New()); connNew->alloc(0,1); connNewI->alloc(1,1); connNewI->setIJ(0,0,0);
+ MCAuto<DataArrayInt> connNew(DataArrayInt::New()),connNewI(DataArrayInt::New()); connNew->alloc(0,1); connNewI->alloc(1,1); connNewI->setIJ(0,0,0);
std::vector<bool> toBeDone(nbOfCells,false);
for(const int *iter=cellIdsToConvertBg;iter!=cellIdsToConvertEnd;iter++)
{
{
std::ostringstream oss; oss << "MEDCouplingUMesh::convertToPolyTypes : On rank #" << std::distance(cellIdsToConvertBg,iter) << " value is " << *iter << " which is not";
oss << " in range [0," << nbOfCells << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
for(int cellId=0;cellId<nbOfCells;cellId++)
if(getMeshDimension()!=3 || getSpaceDimension()!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::convertExtrudedPolyhedra works on umeshes with meshdim equal to 3 and spaceDim equal to 3 too!");
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newCi=DataArrayInt::New();
+ MCAuto<DataArrayInt> newCi=DataArrayInt::New();
newCi->alloc(nbOfCells+1,1);
int *newci=newCi->getPointer();
const int *ci=_nodal_connec_index->getConstPointer();
if(std::count(c+ci[i]+1,c+ci[i+1],-1)!=0)
{
std::ostringstream oss; oss << "MEDCouplingUMesh::convertExtrudedPolyhedra : cell # " << i << " is a polhedron BUT it has NOT exactly 1 face !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
std::size_t n2=std::distance(c+ci[i]+1,c+ci[i+1]);
if(n2%2!=0)
{
std::ostringstream oss; oss << "MEDCouplingUMesh::convertExtrudedPolyhedra : cell # " << i << " is a polhedron with 1 face but there is a mismatch of number of nodes in face should be even !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
int n1=(int)(n2/2);
newci[i+1]=7*n1+2+newci[i];//6*n1 (nodal length) + n1+2 (number of faces) - 1 (number of '-1' separator is equal to number of faces -1) + 1 (for cell type)
else
newci[i+1]=(ci[i+1]-ci[i])+newci[i];
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newC=DataArrayInt::New();
+ MCAuto<DataArrayInt> newC=DataArrayInt::New();
newC->alloc(newci[nbOfCells],1);
int *newc=newC->getPointer();
for(int i=0;i<nbOfCells;i++)
* \warning Cells of the result mesh are \b not sorted by geometric type, hence,
* to write this mesh to the MED file, its cells must be sorted using
* sortCellsInMEDFileFrmt().
+ * \warning Cells (and most notably polyhedrons) must be correctly oriented for this to work
+ * properly. See orientCorrectlyPolyhedrons() and arePolyhedronsNotCorrectlyOriented().
* \return \c true if at least one cell has been converted, \c false else. In the
* last case the nodal connectivity remains unchanged.
* \throw If the coordinates array is not set.
int nbOfCells=getNumberOfCells();
if(nbOfCells<1)
return false;
- int initMeshLgth=getMeshLength();
+ int initMeshLgth=getNodalConnectivityArrayLen();
int *conn=_nodal_connec->getPointer();
int *index=_nodal_connec_index->getPointer();
int posOfCurCell=0;
checkFullyDefined();
if(getMeshDimension()!=3 || getSpaceDimension()!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::simplifyPolyhedra : works on meshdimension 3 and spaceDimension 3 !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coords=getCoords()->deepCpy();
+ MCAuto<DataArrayDouble> coords=getCoords()->deepCopy();
coords->recenterForMaxPrecision(eps);
//
int nbOfCells=getNumberOfCells();
const int *conn=_nodal_connec->getConstPointer();
const int *index=_nodal_connec_index->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> connINew=DataArrayInt::New();
+ MCAuto<DataArrayInt> connINew=DataArrayInt::New();
connINew->alloc(nbOfCells+1,1);
int *connINewPtr=connINew->getPointer(); *connINewPtr++=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> connNew=DataArrayInt::New(); connNew->alloc(0,1);
+ MCAuto<DataArrayInt> connNew=DataArrayInt::New(); connNew->alloc(0,1);
bool changed=false;
for(int i=0;i<nbOfCells;i++,connINewPtr++)
{
}
/*!
- * This method returns all node ids used in \b this. The data array returned has to be dealt by the caller.
- * The returned node ids are sortes ascendingly. This method is closed to MEDCouplingUMesh::getNodeIdsInUse except
- * the format of returned DataArrayInt instance.
+ * This method returns all node ids used in the connectivity of \b this. The data array returned has to be dealt by the caller.
+ * The returned node ids are sorted ascendingly. This method is close to MEDCouplingUMesh::getNodeIdsInUse except
+ * the format of the returned DataArrayInt instance.
*
* \return a newly allocated DataArrayInt sorted ascendingly of fetched node ids.
- * \sa MEDCouplingUMesh::getNodeIdsInUse
+ * \sa MEDCouplingUMesh::getNodeIdsInUse, areAllNodesFetched
*/
DataArrayInt *MEDCouplingUMesh::computeFetchedNodeIds() const
{
checkConnectivityFullyDefined();
- int nbOfCells=getNumberOfCells();
- const int *connIndex=_nodal_connec_index->getConstPointer();
- const int *conn=_nodal_connec->getConstPointer();
- const int *maxEltPt=std::max_element(_nodal_connec->begin(),_nodal_connec->end());
- int maxElt=maxEltPt==_nodal_connec->end()?0:std::abs(*maxEltPt)+1;
+ const int *maxEltPt(std::max_element(_nodal_connec->begin(),_nodal_connec->end()));
+ int maxElt(maxEltPt==_nodal_connec->end()?0:std::abs(*maxEltPt)+1);
std::vector<bool> retS(maxElt,false);
- for(int i=0;i<nbOfCells;i++)
- for(int j=connIndex[i]+1;j<connIndex[i+1];j++)
- if(conn[j]>=0)
- retS[conn[j]]=true;
- int sz=0;
- for(int i=0;i<maxElt;i++)
- if(retS[i])
- sz++;
- DataArrayInt *ret=DataArrayInt::New();
- ret->alloc(sz,1);
- int *retPtr=ret->getPointer();
- for(int i=0;i<maxElt;i++)
- if(retS[i])
- *retPtr++=i;
- return ret;
+ computeNodeIdsAlg(retS);
+ return DataArrayInt::BuildListOfSwitchedOn(retS);
}
/*!
* \param [in,out] nodeIdsInUse an array of size typically equal to nbOfNodes.
- * \sa MEDCouplingUMesh::getNodeIdsInUse
+ * \sa MEDCouplingUMesh::getNodeIdsInUse, areAllNodesFetched
*/
void MEDCouplingUMesh::computeNodeIdsAlg(std::vector<bool>& nodeIdsInUse) const
{
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::computeNodeIdsAlg : In cell #" << i << " presence of node id " << conn[j] << " not in [0," << nbOfNodes << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
}
{
nbrOfNodesInUse=-1;
int nbOfNodes(getNumberOfNodes());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayInt> ret=DataArrayInt::New();
ret->alloc(nbOfNodes,1);
int *traducer=ret->getPointer();
std::fill(traducer,traducer+nbOfNodes,-1);
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::getNodeIdsInUse : In cell #" << i << " presence of node id " << conn[j] << " not in [0," << nbOfNodes << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
nbrOfNodesInUse=(int)std::count(traducer,traducer+nbOfNodes,1);
{
checkConnectivityFullyDefined();
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayInt> ret=DataArrayInt::New();
ret->alloc(nbOfCells,1);
int *retPtr=ret->getPointer();
const int *conn=getNodalConnectivity()->getConstPointer();
{
checkConnectivityFullyDefined();
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayInt> ret=DataArrayInt::New();
ret->alloc(nbOfCells,1);
int *retPtr=ret->getPointer();
const int *conn=getNodalConnectivity()->getConstPointer();
{
checkConnectivityFullyDefined();
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayInt> ret=DataArrayInt::New();
ret->alloc(nbOfCells,1);
int *retPtr=ret->getPointer();
const int *conn=getNodalConnectivity()->getConstPointer();
* \throw If the coordinates array is not set.
* \throw If the nodal connectivity of cells is not defined.
* \throw If the nodal connectivity includes an invalid id.
+ * \sa areAllNodesFetched
*
* \if ENABLE_EXAMPLES
* \ref cpp_mcumesh_zipCoordsTraducer "Here is a C++ example".<br>
switch(compType)
{
case 0:
- return AreCellsEqual0(conn,connI,cell1,cell2);
+ return AreCellsEqualPolicy0(conn,connI,cell1,cell2);
case 1:
- return AreCellsEqual1(conn,connI,cell1,cell2);
+ return AreCellsEqualPolicy1(conn,connI,cell1,cell2);
case 2:
- return AreCellsEqual2(conn,connI,cell1,cell2);
+ return AreCellsEqualPolicy2(conn,connI,cell1,cell2);
case 3:
- return AreCellsEqual3(conn,connI,cell1,cell2);
+ return AreCellsEqualPolicy2NoType(conn,connI,cell1,cell2);
case 7:
- return AreCellsEqual7(conn,connI,cell1,cell2);
+ return AreCellsEqualPolicy7(conn,connI,cell1,cell2);
}
throw INTERP_KERNEL::Exception("Unknown comparison asked ! Must be in 0,1,2,3 or 7.");
}
/*!
* This method is the last step of the MEDCouplingPointSet::zipConnectivityTraducer with policy 0.
*/
-int MEDCouplingUMesh::AreCellsEqual0(const int *conn, const int *connI, int cell1, int cell2)
+int MEDCouplingUMesh::AreCellsEqualPolicy0(const int *conn, const int *connI, int cell1, int cell2)
{
if(connI[cell1+1]-connI[cell1]==connI[cell2+1]-connI[cell2])
return std::equal(conn+connI[cell1]+1,conn+connI[cell1+1],conn+connI[cell2]+1)?1:0;
/*!
* This method is the last step of the MEDCouplingPointSet::zipConnectivityTraducer with policy 1.
*/
-int MEDCouplingUMesh::AreCellsEqual1(const int *conn, const int *connI, int cell1, int cell2)
+int MEDCouplingUMesh::AreCellsEqualPolicy1(const int *conn, const int *connI, int cell1, int cell2)
{
int sz=connI[cell1+1]-connI[cell1];
if(sz==connI[cell2+1]-connI[cell2])
return std::equal(conn+connI[cell1]+1,conn+connI[cell1+1],conn+connI[cell2]+1)?1:0;//case of SEG2 and SEG3
}
else
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::AreCellsEqual1 : not implemented yet for meshdim == 3 !");
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::AreCellsEqualPolicy1 : not implemented yet for meshdim == 3 !");
}
}
return 0;
/*!
* This method is the last step of the MEDCouplingPointSet::zipConnectivityTraducer with policy 2.
*/
-int MEDCouplingUMesh::AreCellsEqual2(const int *conn, const int *connI, int cell1, int cell2)
+int MEDCouplingUMesh::AreCellsEqualPolicy2(const int *conn, const int *connI, int cell1, int cell2)
{
if(connI[cell1+1]-connI[cell1]==connI[cell2+1]-connI[cell2])
{
}
/*!
- * This method is less restrictive than AreCellsEqual2. Here the geometric type is absolutely not taken into account !
+ * This method is less restrictive than AreCellsEqualPolicy2. Here the geometric type is absolutely not taken into account !
*/
-int MEDCouplingUMesh::AreCellsEqual3(const int *conn, const int *connI, int cell1, int cell2)
+int MEDCouplingUMesh::AreCellsEqualPolicy2NoType(const int *conn, const int *connI, int cell1, int cell2)
{
if(connI[cell1+1]-connI[cell1]==connI[cell2+1]-connI[cell2])
{
/*!
* This method is the last step of the MEDCouplingPointSet::zipConnectivityTraducer with policy 7.
*/
-int MEDCouplingUMesh::AreCellsEqual7(const int *conn, const int *connI, int cell1, int cell2)
+int MEDCouplingUMesh::AreCellsEqualPolicy7(const int *conn, const int *connI, int cell1, int cell2)
{
int sz=connI[cell1+1]-connI[cell1];
if(sz==connI[cell2+1]-connI[cell2])
}
}
else
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::AreCellsEqual7 : not implemented yet for meshdim == 3 !");
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::AreCellsEqualPolicy7 : not implemented yet for meshdim == 3 !");
}
}
return 0;
}
/*!
- * This method find cells that are cells equal (regarding \a compType) in \a this. The comparison is specified by \a compType.
- * This method keeps the coordiantes of \a this. This method is time consuming and is called
+ * This method find cells that are equal (regarding \a compType) in \a this. The comparison is specified
+ * by \a compType.
+ * This method keeps the coordiantes of \a this. This method is time consuming.
*
* \param [in] compType input specifying the technique used to compare cells each other.
* - 0 : exactly. A cell is detected to be the same if and only if the connectivity is exactly the same without permutation and types same too. This is the strongest policy.
* - 2 : nodal. cell1 and cell2 are equal if and only if cell1 and cell2 have same type and have the same nodes constituting connectivity. This is the laziest policy. This policy
* can be used for users not sensitive to orientation of cell
* \param [in] startCellId specifies the cellId starting from which the equality computation will be carried out. By default it is 0, which it means that all cells in \a this will be scanned.
- * \param [out] commonCells
- * \param [out] commonCellsI
+ * \param [out] commonCellsArr common cells ids (\ref numbering-indirect)
+ * \param [out] commonCellsIArr common cells ids (\ref numbering-indirect)
* \return the correspondance array old to new in a newly allocated array.
*
*/
void MEDCouplingUMesh::findCommonCells(int compType, int startCellId, DataArrayInt *& commonCellsArr, DataArrayInt *& commonCellsIArr) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revNodal=DataArrayInt::New(),revNodalI=DataArrayInt::New();
+ MCAuto<DataArrayInt> revNodal=DataArrayInt::New(),revNodalI=DataArrayInt::New();
getReverseNodalConnectivity(revNodal,revNodalI);
FindCommonCellsAlg(compType,startCellId,_nodal_connec,_nodal_connec_index,revNodal,revNodalI,commonCellsArr,commonCellsIArr);
}
void MEDCouplingUMesh::FindCommonCellsAlg(int compType, int startCellId, const DataArrayInt *nodal, const DataArrayInt *nodalI, const DataArrayInt *revNodal, const DataArrayInt *revNodalI,
DataArrayInt *& commonCellsArr, DataArrayInt *& commonCellsIArr)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> commonCells=DataArrayInt::New(),commonCellsI=DataArrayInt::New(); commonCells->alloc(0,1);
+ MCAuto<DataArrayInt> commonCells=DataArrayInt::New(),commonCellsI=DataArrayInt::New(); commonCells->alloc(0,1);
int nbOfCells=nodalI->getNumberOfTuples()-1;
commonCellsI->reserve(1); commonCellsI->pushBackSilent(0);
const int *revNodalPtr=revNodal->getConstPointer(),*revNodalIPtr=revNodalI->getConstPointer();
/*!
* Checks if \a this mesh includes all cells of an \a other mesh, and returns an array
* giving for each cell of the \a other an id of a cell in \a this mesh. A value larger
- * than \a other->getNumberOfCells() in the returned array means that there is no
+ * than \a this->getNumberOfCells() in the returned array means that there is no
* corresponding cell in \a this mesh.
* It is expected that \a this and \a other meshes share the same node coordinates
* array, if it is not so an exception is thrown.
*/
bool MEDCouplingUMesh::areCellsIncludedIn(const MEDCouplingUMesh *other, int compType, DataArrayInt *& arr) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mesh=MergeUMeshesOnSameCoords(this,other);
+ MCAuto<MEDCouplingUMesh> mesh=MergeUMeshesOnSameCoords(this,other);
int nbOfCells=getNumberOfCells();
static const int possibleCompType[]={0,1,2};
if(std::find(possibleCompType,possibleCompType+sizeof(possibleCompType)/sizeof(int),compType)==possibleCompType+sizeof(possibleCompType)/sizeof(int))
std::ostringstream oss; oss << "MEDCouplingUMesh::areCellsIncludedIn : only following policies are possible : ";
std::copy(possibleCompType,possibleCompType+sizeof(possibleCompType)/sizeof(int),std::ostream_iterator<int>(oss," "));
oss << " !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> o2n=mesh->zipConnectivityTraducer(compType,nbOfCells);
- arr=o2n->substr(nbOfCells);
+ MCAuto<DataArrayInt> o2n=mesh->zipConnectivityTraducer(compType,nbOfCells);
+ arr=o2n->subArray(nbOfCells);
arr->setName(other->getName());
int tmp;
if(other->getNumberOfCells()==0)
* The main difference is that this method is not expected to throw exception.
* This method has two outputs :
*
+ * \param other other mesh
* \param arr is an output parameter that returns a \b newly created instance. This array is of size 'other->getNumberOfCells()'.
* \return If \a other is fully included in 'this 'true is returned. If not false is returned.
*/
-bool MEDCouplingUMesh::areCellsIncludedIn2(const MEDCouplingUMesh *other, DataArrayInt *& arr) const
+bool MEDCouplingUMesh::areCellsIncludedInPolicy7(const MEDCouplingUMesh *other, DataArrayInt *& arr) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mesh=MergeUMeshesOnSameCoords(this,other);
+ MCAuto<MEDCouplingUMesh> mesh=MergeUMeshesOnSameCoords(this,other);
DataArrayInt *commonCells=0,*commonCellsI=0;
int thisNbCells=getNumberOfCells();
mesh->findCommonCells(7,thisNbCells,commonCells,commonCellsI);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> commonCellsTmp(commonCells),commonCellsITmp(commonCellsI);
+ MCAuto<DataArrayInt> commonCellsTmp(commonCells),commonCellsITmp(commonCellsI);
const int *commonCellsPtr=commonCells->getConstPointer(),*commonCellsIPtr=commonCellsI->getConstPointer();
int otherNbCells=other->getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> arr2=DataArrayInt::New();
+ MCAuto<DataArrayInt> arr2=DataArrayInt::New();
arr2->alloc(otherNbCells,1);
arr2->fillWithZero();
int *arr2Ptr=arr2->getPointer();
return true;
}
-MEDCouplingPointSet *MEDCouplingUMesh::mergeMyselfWithOnSameCoords(const MEDCouplingPointSet *other) const
+MEDCouplingUMesh *MEDCouplingUMesh::mergeMyselfWithOnSameCoords(const MEDCouplingPointSet *other) const
{
if(!other)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::mergeMyselfWithOnSameCoords : input other is null !");
* By default coordinates are kept. This method is close to MEDCouplingUMesh::buildPartOfMySelf except that here input
* cellIds is not given explicitely but by a range python like.
*
- * \param keepCoords that specifies if you want or not to keep coords as this or zip it (see ParaMEDMEM::MEDCouplingUMesh::zipCoords). If true zipCoords is \b NOT called, if false, zipCoords is called.
+ * \param start
+ * \param end
+ * \param step
+ * \param keepCoords that specifies if you want or not to keep coords as this or zip it (see MEDCoupling::MEDCouplingUMesh::zipCoords). If true zipCoords is \b NOT called, if false, zipCoords is called.
* \return a newly allocated
*
* \warning This method modifies can generate an unstructured mesh whose cells are not sorted by geometric type order.
* In view of the MED file writing, a renumbering of cells of returned unstructured mesh (using MEDCouplingUMesh::sortCellsInMEDFileFrmt) should be necessary.
*/
-MEDCouplingPointSet *MEDCouplingUMesh::buildPartOfMySelf2(int start, int end, int step, bool keepCoords) const
+MEDCouplingUMesh *MEDCouplingUMesh::buildPartOfMySelfSlice(int start, int end, int step, bool keepCoords) const
{
if(getMeshDimension()!=-1)
- return MEDCouplingPointSet::buildPartOfMySelf2(start,end,step,keepCoords);
+ return static_cast<MEDCouplingUMesh *>(MEDCouplingPointSet::buildPartOfMySelfSlice(start,end,step,keepCoords));
else
{
- int newNbOfCells=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCouplingUMesh::buildPartOfMySelf2 for -1 dimension mesh ");
+ int newNbOfCells=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCouplingUMesh::buildPartOfMySelfSlice for -1 dimension mesh ");
if(newNbOfCells!=1)
throw INTERP_KERNEL::Exception("-1D mesh has only one cell !");
if(start!=0)
* \param [in] keepCoords - if \c true, the result mesh shares the node coordinates
* array of \a this mesh, else "free" nodes are removed from the result mesh
* by calling zipCoords().
- * \return MEDCouplingPointSet * - a new instance of MEDCouplingUMesh. The caller is
+ * \return MEDCouplingUMesh * - a new instance of MEDCouplingUMesh. The caller is
* to delete this mesh using decrRef() as it is no more needed.
* \throw If the coordinates array is not set.
* \throw If the nodal connectivity of cells is not defined.
* \ref py_mcumesh_buildPartOfMySelf "Here is a Python example".
* \endif
*/
-MEDCouplingPointSet *MEDCouplingUMesh::buildPartOfMySelf(const int *begin, const int *end, bool keepCoords) const
+MEDCouplingUMesh *MEDCouplingUMesh::buildPartOfMySelf(const int *begin, const int *end, bool keepCoords) const
{
if(getMeshDimension()!=-1)
- return MEDCouplingPointSet::buildPartOfMySelf(begin,end,keepCoords);
+ return static_cast<MEDCouplingUMesh *>(MEDCouplingPointSet::buildPartOfMySelf(begin,end,keepCoords));
else
{
if(end-begin!=1)
* Size of [ \b cellIdsBg, \b cellIdsEnd ) ) must be equal to the number of cells of otherOnSameCoordsThanThis.
* The number of cells of \b this will remain the same with this method.
*
- * \param [in] begin begin of cell ids (included) of cells in this to assign
- * \param [in] end end of cell ids (excluded) of cells in this to assign
+ * \param [in] cellIdsBg begin of cell ids (included) of cells in this to assign
+ * \param [in] cellIdsEnd end of cell ids (excluded) of cells in this to assign
* \param [in] otherOnSameCoordsThanThis an another mesh with same meshdimension than \b this with exactly the same number of cells than cell ids list in [\b cellIdsBg, \b cellIdsEnd ).
* Coordinate pointer of \b this and those of \b otherOnSameCoordsThanThis must be the same
*/
{
std::ostringstream oss; oss << "MEDCouplingUMesh::setPartOfMySelf : Mismatch of meshdimensions ! this is equal to " << getMeshDimension();
oss << ", whereas other mesh dimension is set equal to " << otherOnSameCoordsThanThis.getMeshDimension() << " !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
int nbOfCellsToModify=(int)std::distance(cellIdsBg,cellIdsEnd);
if(nbOfCellsToModify!=otherOnSameCoordsThanThis.getNumberOfCells())
{
std::ostringstream oss; oss << "MEDCouplingUMesh::setPartOfMySelf : cells ids length (" << nbOfCellsToModify << ") do not match the number of cells of other mesh (" << otherOnSameCoordsThanThis.getNumberOfCells() << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
int nbOfCells=getNumberOfCells();
bool easyAssign=true;
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::setPartOfMySelf : On pos #" << std::distance(cellIdsBg,it) << " id is equal to " << *it << " which is not in [0," << nbOfCells << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
if(easyAssign)
DataArrayInt *arrOut=0,*arrIOut=0;
MEDCouplingUMesh::SetPartOfIndexedArrays(cellIdsBg,cellIdsEnd,_nodal_connec,_nodal_connec_index,otherOnSameCoordsThanThis._nodal_connec,otherOnSameCoordsThanThis._nodal_connec_index,
arrOut,arrIOut);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> arrOutAuto(arrOut),arrIOutAuto(arrIOut);
+ MCAuto<DataArrayInt> arrOutAuto(arrOut),arrIOutAuto(arrIOut);
setConnectivity(arrOut,arrIOut,true);
}
}
-void MEDCouplingUMesh::setPartOfMySelf2(int start, int end, int step, const MEDCouplingUMesh& otherOnSameCoordsThanThis)
+void MEDCouplingUMesh::setPartOfMySelfSlice(int start, int end, int step, const MEDCouplingUMesh& otherOnSameCoordsThanThis)
{
checkConnectivityFullyDefined();
otherOnSameCoordsThanThis.checkConnectivityFullyDefined();
if(getCoords()!=otherOnSameCoordsThanThis.getCoords())
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::setPartOfMySelf2 : coordinates pointer are not the same ! Invoke setCoords or call tryToShareSameCoords method !");
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::setPartOfMySelfSlice : coordinates pointer are not the same ! Invoke setCoords or call tryToShareSameCoords method !");
if(getMeshDimension()!=otherOnSameCoordsThanThis.getMeshDimension())
{
- std::ostringstream oss; oss << "MEDCouplingUMesh::setPartOfMySelf2 : Mismatch of meshdimensions ! this is equal to " << getMeshDimension();
+ std::ostringstream oss; oss << "MEDCouplingUMesh::setPartOfMySelfSlice : Mismatch of meshdimensions ! this is equal to " << getMeshDimension();
oss << ", whereas other mesh dimension is set equal to " << otherOnSameCoordsThanThis.getMeshDimension() << " !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
- int nbOfCellsToModify=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCouplingUMesh::setPartOfMySelf2 : ");
+ int nbOfCellsToModify=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCouplingUMesh::setPartOfMySelfSlice : ");
if(nbOfCellsToModify!=otherOnSameCoordsThanThis.getNumberOfCells())
{
- std::ostringstream oss; oss << "MEDCouplingUMesh::setPartOfMySelf2 : cells ids length (" << nbOfCellsToModify << ") do not match the number of cells of other mesh (" << otherOnSameCoordsThanThis.getNumberOfCells() << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ std::ostringstream oss; oss << "MEDCouplingUMesh::setPartOfMySelfSlice : cells ids length (" << nbOfCellsToModify << ") do not match the number of cells of other mesh (" << otherOnSameCoordsThanThis.getNumberOfCells() << ") !";
+ throw INTERP_KERNEL::Exception(oss.str());
}
int nbOfCells=getNumberOfCells();
bool easyAssign=true;
}
else
{
- std::ostringstream oss; oss << "MEDCouplingUMesh::setPartOfMySelf2 : On pos #" << i << " id is equal to " << it << " which is not in [0," << nbOfCells << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ std::ostringstream oss; oss << "MEDCouplingUMesh::setPartOfMySelfSlice : On pos #" << i << " id is equal to " << it << " which is not in [0," << nbOfCells << ") !";
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
if(easyAssign)
{
- MEDCouplingUMesh::SetPartOfIndexedArraysSameIdx2(start,end,step,_nodal_connec,_nodal_connec_index,otherOnSameCoordsThanThis._nodal_connec,otherOnSameCoordsThanThis._nodal_connec_index);
+ MEDCouplingUMesh::SetPartOfIndexedArraysSameIdxSlice(start,end,step,_nodal_connec,_nodal_connec_index,otherOnSameCoordsThanThis._nodal_connec,otherOnSameCoordsThanThis._nodal_connec_index);
computeTypes();
}
else
{
DataArrayInt *arrOut=0,*arrIOut=0;
- MEDCouplingUMesh::SetPartOfIndexedArrays2(start,end,step,_nodal_connec,_nodal_connec_index,otherOnSameCoordsThanThis._nodal_connec,otherOnSameCoordsThanThis._nodal_connec_index,
+ MEDCouplingUMesh::SetPartOfIndexedArraysSlice(start,end,step,_nodal_connec,_nodal_connec_index,otherOnSameCoordsThanThis._nodal_connec,otherOnSameCoordsThanThis._nodal_connec_index,
arrOut,arrIOut);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> arrOutAuto(arrOut),arrIOutAuto(arrIOut);
+ MCAuto<DataArrayInt> arrOutAuto(arrOut),arrIOutAuto(arrIOut);
setConnectivity(arrOut,arrIOut,true);
}
}
*/
void MEDCouplingUMesh::fillCellIdsToKeepFromNodeIds(const int *begin, const int *end, bool fullyIn, DataArrayInt *&cellIdsKeptArr) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellIdsKept=DataArrayInt::New(); cellIdsKept->alloc(0,1);
+ MCAuto<DataArrayInt> cellIdsKept=DataArrayInt::New(); cellIdsKept->alloc(0,1);
checkConnectivityFullyDefined();
int tmp=-1;
int sz=getNodalConnectivity()->getMaxValue(tmp); sz=std::max(sz,0)+1;
* \param [in] fullyIn - if \c true, then cells whose all nodes are in the
* array \a begin are added, else cells whose any node is in the
* array \a begin are added.
- * \return MEDCouplingPointSet * - new instance of MEDCouplingUMesh. The caller is
+ * \return MEDCouplingUMesh * - new instance of MEDCouplingUMesh. The caller is
* to delete this mesh using decrRef() as it is no more needed.
* \throw If the coordinates array is not set.
* \throw If the nodal connectivity of cells is not defined.
* \ref py_mcumesh_buildFacePartOfMySelfNode "Here is a Python example".
* \endif
*/
-MEDCouplingPointSet *MEDCouplingUMesh::buildFacePartOfMySelfNode(const int *begin, const int *end, bool fullyIn) const
+MEDCouplingUMesh *MEDCouplingUMesh::buildFacePartOfMySelfNode(const int *begin, const int *end, bool fullyIn) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc,descIndx,revDesc,revDescIndx;
+ MCAuto<DataArrayInt> desc,descIndx,revDesc,revDescIndx;
desc=DataArrayInt::New(); descIndx=DataArrayInt::New(); revDesc=DataArrayInt::New(); revDescIndx=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> subMesh=buildDescendingConnectivity(desc,descIndx,revDesc,revDescIndx);
+ MCAuto<MEDCouplingUMesh> subMesh=buildDescendingConnectivity(desc,descIndx,revDesc,revDescIndx);
desc=0; descIndx=0; revDesc=0; revDescIndx=0;
- return subMesh->buildPartOfMySelfNode(begin,end,fullyIn);
+ return static_cast<MEDCouplingUMesh*>(subMesh->buildPartOfMySelfNode(begin,end,fullyIn));
}
/*!
* \param [in] keepCoords - if \c true, the result mesh shares the node coordinates
* array of \a this mesh, else "free" nodes are removed from the result mesh
* by calling zipCoords().
- * \return MEDCouplingPointSet * - a new instance of MEDCouplingUMesh. The caller is
+ * \return MEDCouplingUMesh * - a new instance of MEDCouplingUMesh. The caller is
* to delete this mesh using decrRef() as it is no more needed.
* \throw If the coordinates array is not set.
* \throw If the nodal connectivity of cells is not defined.
* \ref py_mcumesh_buildBoundaryMesh "Here is a Python example".
* \endif
*/
-MEDCouplingPointSet *MEDCouplingUMesh::buildBoundaryMesh(bool keepCoords) const
+MEDCouplingUMesh *MEDCouplingUMesh::buildBoundaryMesh(bool keepCoords) const
{
DataArrayInt *desc=DataArrayInt::New();
DataArrayInt *descIndx=DataArrayInt::New();
DataArrayInt *revDesc=DataArrayInt::New();
DataArrayInt *revDescIndx=DataArrayInt::New();
//
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> meshDM1=buildDescendingConnectivity(desc,descIndx,revDesc,revDescIndx);
+ MCAuto<MEDCouplingUMesh> meshDM1=buildDescendingConnectivity(desc,descIndx,revDesc,revDescIndx);
revDesc->decrRef();
desc->decrRef();
descIndx->decrRef();
if(revDescIndxC[i+1]-revDescIndxC[i]==1)
boundaryCells.push_back(i);
revDescIndx->decrRef();
- MEDCouplingPointSet *ret=meshDM1->buildPartOfMySelf(&boundaryCells[0],&boundaryCells[0]+boundaryCells.size(),keepCoords);
+ MEDCouplingUMesh *ret=meshDM1->buildPartOfMySelf(&boundaryCells[0],&boundaryCells[0]+boundaryCells.size(),keepCoords);
return ret;
}
DataArrayInt *MEDCouplingUMesh::findCellIdsOnBoundary() const
{
checkFullyDefined();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> descIndx=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDesc=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDescIndx=DataArrayInt::New();
+ MCAuto<DataArrayInt> desc=DataArrayInt::New();
+ MCAuto<DataArrayInt> descIndx=DataArrayInt::New();
+ MCAuto<DataArrayInt> revDesc=DataArrayInt::New();
+ MCAuto<DataArrayInt> revDescIndx=DataArrayInt::New();
//
buildDescendingConnectivity(desc,descIndx,revDesc,revDescIndx)->decrRef();
desc=(DataArrayInt*)0; descIndx=(DataArrayInt*)0;
//
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp=revDescIndx->deltaShiftIndex();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> faceIds=tmp->getIdsEqual(1); tmp=(DataArrayInt*)0;
+ MCAuto<DataArrayInt> tmp=revDescIndx->deltaShiftIndex();
+ MCAuto<DataArrayInt> faceIds=tmp->findIdsEqual(1); tmp=(DataArrayInt*)0;
const int *revDescPtr=revDesc->getConstPointer();
const int *revDescIndxPtr=revDescIndx->getConstPointer();
int nbOfCells=getNumberOfCells();
}
/*!
- * This method find in \b this cells ids that lie on mesh \b otherDimM1OnSameCoords.
+ * This method finds in \b this the cell ids that lie on mesh \b otherDimM1OnSameCoords.
* \b this and \b otherDimM1OnSameCoords have to lie on the same coordinate array pointer. The coherency of that coords array with connectivity
* of \b this and \b otherDimM1OnSameCoords is not important here because this method works only on connectivity.
* this->getMeshDimension() - 1 must be equal to otherDimM1OnSameCoords.getMeshDimension()
*
- * s0 is the cells ids set in \b this lying on at least one node in fetched nodes in \b otherDimM1OnSameCoords.
- * This method method returns cells ids set s = s1 + s2 where :
- *
- * - s1 are cells ids in \b this whose dim-1 constituent equals a cell in \b otherDimM1OnSameCoords.
- * - s2 are cells ids in \b s0 - \b s1 whose at least two neighbors are in s1.
+ * s0 is the cell ids set in \b this lying on at least one node in the fetched nodes in \b otherDimM1OnSameCoords.
+ * This method also returns the cells ids set s1 which contains the cell ids in \b this for which one of the dim-1 constituent
+ * equals a cell in \b otherDimM1OnSameCoords.
*
* \throw if \b otherDimM1OnSameCoords is not part of constituent of \b this, or if coordinate pointer of \b this and \b otherDimM1OnSameCoords
* are not same, or if this->getMeshDimension()-1!=otherDimM1OnSameCoords.getMeshDimension()
*
- * \param [out] cellIdsRk0 a newly allocated array containing cells ids in \b this containg s0 in above algorithm.
- * \param [out] cellIdsRk1 a newly allocated array containing cells ids of s1+s2 \b into \b cellIdsRk0 subset. To get absolute ids of s1+s2 simply invoke
+ * \param [in] otherDimM1OnSameCoords
+ * \param [out] cellIdsRk0 a newly allocated array containing the cell ids of s0 (which are cell ids of \b this) in the above algorithm.
+ * \param [out] cellIdsRk1 a newly allocated array containing the cell ids of s1 \b indexed into the \b cellIdsRk0 subset. To get the absolute ids of s1, simply invoke
* cellIdsRk1->transformWithIndArr(cellIdsRk0->begin(),cellIdsRk0->end());
*/
void MEDCouplingUMesh::findCellIdsLyingOn(const MEDCouplingUMesh& otherDimM1OnSameCoords, DataArrayInt *&cellIdsRk0, DataArrayInt *&cellIdsRk1) const
otherDimM1OnSameCoords.checkConnectivityFullyDefined();
if(getMeshDimension()-1!=otherDimM1OnSameCoords.getMeshDimension())
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::findCellIdsLyingOn : invalid mesh dimension of input mesh regarding meshdimesion of this !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> fetchedNodeIds1=otherDimM1OnSameCoords.computeFetchedNodeIds();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> s0arr=getCellIdsLyingOnNodes(fetchedNodeIds1->begin(),fetchedNodeIds1->end(),false);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> thisPart=static_cast<MEDCouplingUMesh *>(buildPartOfMySelf(s0arr->begin(),s0arr->end(),true));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> descThisPart=DataArrayInt::New(),descIThisPart=DataArrayInt::New(),revDescThisPart=DataArrayInt::New(),revDescIThisPart=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> thisPartConsti=thisPart->buildDescendingConnectivity(descThisPart,descIThisPart,revDescThisPart,revDescIThisPart);
+ MCAuto<DataArrayInt> fetchedNodeIds1=otherDimM1OnSameCoords.computeFetchedNodeIds();
+ MCAuto<DataArrayInt> s0arr=getCellIdsLyingOnNodes(fetchedNodeIds1->begin(),fetchedNodeIds1->end(),false);
+ MCAuto<MEDCouplingUMesh> thisPart=static_cast<MEDCouplingUMesh *>(buildPartOfMySelf(s0arr->begin(),s0arr->end(),true));
+ MCAuto<DataArrayInt> descThisPart=DataArrayInt::New(),descIThisPart=DataArrayInt::New(),revDescThisPart=DataArrayInt::New(),revDescIThisPart=DataArrayInt::New();
+ MCAuto<MEDCouplingUMesh> thisPartConsti=thisPart->buildDescendingConnectivity(descThisPart,descIThisPart,revDescThisPart,revDescIThisPart);
const int *revDescThisPartPtr=revDescThisPart->getConstPointer(),*revDescIThisPartPtr=revDescIThisPart->getConstPointer();
DataArrayInt *idsOtherInConsti=0;
bool b=thisPartConsti->areCellsIncludedIn(&otherDimM1OnSameCoords,2,idsOtherInConsti);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> idsOtherInConstiAuto(idsOtherInConsti);
+ MCAuto<DataArrayInt> idsOtherInConstiAuto(idsOtherInConsti);
if(!b)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::findCellIdsLyingOn : the given mdim-1 mesh in other is not a constituent of this !");
std::set<int> s1;
for(const int *idOther=idsOtherInConsti->begin();idOther!=idsOtherInConsti->end();idOther++)
s1.insert(revDescThisPartPtr+revDescIThisPartPtr[*idOther],revDescThisPartPtr+revDescIThisPartPtr[*idOther+1]);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> s1arr_renum1=DataArrayInt::New(); s1arr_renum1->alloc((int)s1.size(),1); std::copy(s1.begin(),s1.end(),s1arr_renum1->getPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> s1Comparr_renum1=s1arr_renum1->buildComplement(s0arr->getNumberOfTuples());
- DataArrayInt *neighThisPart=0,*neighIThisPart=0;
- ComputeNeighborsOfCellsAdv(descThisPart,descIThisPart,revDescThisPart,revDescIThisPart,neighThisPart,neighIThisPart);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> neighThisPartAuto(neighThisPart),neighIThisPartAuto(neighIThisPart);
- ExtractFromIndexedArrays(s1Comparr_renum1->begin(),s1Comparr_renum1->end(),neighThisPart,neighIThisPart,neighThisPart,neighIThisPart);// reuse of neighThisPart and neighIThisPart
- neighThisPartAuto=neighThisPart; neighIThisPartAuto=neighIThisPart;
- RemoveIdsFromIndexedArrays(s1Comparr_renum1->begin(),s1Comparr_renum1->end(),neighThisPart,neighIThisPart);
- neighThisPartAuto=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> s2_tmp=neighIThisPart->deltaShiftIndex();
- const int li[2]={0,1};
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> s2_renum2=s2_tmp->getIdsNotEqualList(li,li+2);
- s2_renum2->transformWithIndArr(s1Comparr_renum1->begin(),s1Comparr_renum1->end());//s2_renum2==s2_renum1
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> s_renum1=DataArrayInt::Aggregate(s2_renum2,s1arr_renum1,0);
- s_renum1->sort();
- //
+ MCAuto<DataArrayInt> s1arr_renum1=DataArrayInt::New(); s1arr_renum1->alloc((int)s1.size(),1); std::copy(s1.begin(),s1.end(),s1arr_renum1->getPointer());
+ s1arr_renum1->sort();
cellIdsRk0=s0arr.retn();
- cellIdsRk1=s_renum1.retn();
+ //cellIdsRk1=s_renum1.retn();
+ cellIdsRk1=s1arr_renum1.retn();
}
/*!
*/
MEDCouplingUMesh *MEDCouplingUMesh::computeSkin() const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> descIndx=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDesc=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDescIndx=DataArrayInt::New();
+ MCAuto<DataArrayInt> desc=DataArrayInt::New();
+ MCAuto<DataArrayInt> descIndx=DataArrayInt::New();
+ MCAuto<DataArrayInt> revDesc=DataArrayInt::New();
+ MCAuto<DataArrayInt> revDescIndx=DataArrayInt::New();
//
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> meshDM1=buildDescendingConnectivity(desc,descIndx,revDesc,revDescIndx);
+ MCAuto<MEDCouplingUMesh> meshDM1=buildDescendingConnectivity(desc,descIndx,revDesc,revDescIndx);
revDesc=0; desc=0; descIndx=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDescIndx2=revDescIndx->deltaShiftIndex();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> part=revDescIndx2->getIdsEqual(1);
+ MCAuto<DataArrayInt> revDescIndx2=revDescIndx->deltaShiftIndex();
+ MCAuto<DataArrayInt> part=revDescIndx2->findIdsEqual(1);
return static_cast<MEDCouplingUMesh *>(meshDM1->buildPartOfMySelf(part->begin(),part->end(),true));
}
*/
DataArrayInt *MEDCouplingUMesh::findBoundaryNodes() const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> skin=computeSkin();
+ MCAuto<MEDCouplingUMesh> skin=computeSkin();
return skin->computeFetchedNodeIds();
}
void MEDCouplingUMesh::findNodesToDuplicate(const MEDCouplingUMesh& otherDimM1OnSameCoords, DataArrayInt *& nodeIdsToDuplicate,
DataArrayInt *& cellIdsNeededToBeRenum, DataArrayInt *& cellIdsNotModified) const
{
+ typedef MCAuto<DataArrayInt> DAInt;
+ typedef MCAuto<MEDCouplingUMesh> MCUMesh;
+
checkFullyDefined();
otherDimM1OnSameCoords.checkFullyDefined();
if(getCoords()!=otherDimM1OnSameCoords.getCoords())
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::findNodesToDuplicate : meshes do not share the same coords array !");
if(otherDimM1OnSameCoords.getMeshDimension()!=getMeshDimension()-1)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::findNodesToDuplicate : the mesh given in other parameter must have this->getMeshDimension()-1 !");
- DataArrayInt *cellIdsRk0=0,*cellIdsRk1=0;
- findCellIdsLyingOn(otherDimM1OnSameCoords,cellIdsRk0,cellIdsRk1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellIdsRk0Auto(cellIdsRk0),cellIdsRk1Auto(cellIdsRk1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> s0=cellIdsRk1->buildComplement(cellIdsRk0->getNumberOfTuples());
- s0->transformWithIndArr(cellIdsRk0Auto->begin(),cellIdsRk0Auto->end());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m0Part=static_cast<MEDCouplingUMesh *>(buildPartOfMySelf(s0->begin(),s0->end(),true));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> s1=m0Part->computeFetchedNodeIds();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> s2=otherDimM1OnSameCoords.computeFetchedNodeIds();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> s3=s2->buildSubstraction(s1);
- cellIdsRk1->transformWithIndArr(cellIdsRk0Auto->begin(),cellIdsRk0Auto->end());
+
+ // Checking star-shaped M1 group:
+ DAInt dt0=DataArrayInt::New(),dit0=DataArrayInt::New(),rdt0=DataArrayInt::New(),rdit0=DataArrayInt::New();
+ MCUMesh meshM2 = otherDimM1OnSameCoords.buildDescendingConnectivity(dt0, dit0, rdt0, rdit0);
+ DAInt dsi = rdit0->deltaShiftIndex();
+ DAInt idsTmp0 = dsi->findIdsNotInRange(-1, 3);
+ if(idsTmp0->getNumberOfTuples())
+ throw INTERP_KERNEL::Exception("MEDFileUMesh::buildInnerBoundaryAlongM1Group: group is too complex: some points (or edges) have more than two connected segments (or faces)!");
+ dt0=0; dit0=0; rdt0=0; rdit0=0; idsTmp0=0;
+
+ // Get extreme nodes from the group (they won't be duplicated), ie nodes belonging to boundary cells of M1
+ DAInt xtremIdsM2 = dsi->findIdsEqual(1); dsi = 0;
+ MCUMesh meshM2Part = static_cast<MEDCouplingUMesh *>(meshM2->buildPartOfMySelf(xtremIdsM2->begin(), xtremIdsM2->end(),true));
+ DAInt xtrem = meshM2Part->computeFetchedNodeIds();
+ // Remove from the list points on the boundary of the M0 mesh (those need duplication!)
+ dt0=DataArrayInt::New(),dit0=DataArrayInt::New(),rdt0=DataArrayInt::New(),rdit0=DataArrayInt::New();
+ MCUMesh m0desc = buildDescendingConnectivity(dt0, dit0, rdt0, rdit0); dt0=0; dit0=0; rdt0=0;
+ dsi = rdit0->deltaShiftIndex();
+ DAInt boundSegs = dsi->findIdsEqual(1); // boundary segs/faces of the M0 mesh
+ MCUMesh m0descSkin = static_cast<MEDCouplingUMesh *>(m0desc->buildPartOfMySelf(boundSegs->begin(),boundSegs->end(), true));
+ DAInt fNodes = m0descSkin->computeFetchedNodeIds();
+ // In 3D, some points on the boundary of M0 still need duplication:
+ DAInt notDup = 0;
+ if (getMeshDimension() == 3)
+ {
+ DAInt dnu1=DataArrayInt::New(), dnu2=DataArrayInt::New(), dnu3=DataArrayInt::New(), dnu4=DataArrayInt::New();
+ MCUMesh m0descSkinDesc = m0descSkin->buildDescendingConnectivity(dnu1, dnu2, dnu3, dnu4);
+ dnu1=0;dnu2=0;dnu3=0;dnu4=0;
+ DataArrayInt * corresp=0;
+ meshM2->areCellsIncludedIn(m0descSkinDesc,2,corresp);
+ DAInt validIds = corresp->findIdsInRange(0, meshM2->getNumberOfCells());
+ corresp->decrRef();
+ if (validIds->getNumberOfTuples())
+ {
+ MCUMesh m1IntersecSkin = static_cast<MEDCouplingUMesh *>(m0descSkinDesc->buildPartOfMySelf(validIds->begin(), validIds->end(), true));
+ DAInt notDuplSkin = m1IntersecSkin->findBoundaryNodes();
+ DAInt fNodes1 = fNodes->buildSubstraction(notDuplSkin);
+ notDup = xtrem->buildSubstraction(fNodes1);
+ }
+ else
+ notDup = xtrem->buildSubstraction(fNodes);
+ }
+ else
+ notDup = xtrem->buildSubstraction(fNodes);
+
+ // Now compute cells around group (i.e. cells where we will do the propagation to identify the two sub-sets delimited by the group)
+ DAInt m1Nodes = otherDimM1OnSameCoords.computeFetchedNodeIds();
+ DAInt dupl = m1Nodes->buildSubstraction(notDup);
+ DAInt cellsAroundGroup = getCellIdsLyingOnNodes(dupl->begin(), dupl->end(), false); // false= take cell in, even if not all nodes are in notDup
+
//
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m0Part2=static_cast<MEDCouplingUMesh *>(buildPartOfMySelf(cellIdsRk1->begin(),cellIdsRk1->end(),true));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc00=DataArrayInt::New(),descI00=DataArrayInt::New(),revDesc00=DataArrayInt::New(),revDescI00=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m01=m0Part2->buildDescendingConnectivity(desc00,descI00,revDesc00,revDescI00);
+ MCUMesh m0Part2=static_cast<MEDCouplingUMesh *>(buildPartOfMySelf(cellsAroundGroup->begin(),cellsAroundGroup->end(),true));
+ int nCells2 = m0Part2->getNumberOfCells();
+ DAInt desc00=DataArrayInt::New(),descI00=DataArrayInt::New(),revDesc00=DataArrayInt::New(),revDescI00=DataArrayInt::New();
+ MCUMesh m01=m0Part2->buildDescendingConnectivity(desc00,descI00,revDesc00,revDescI00);
+
+ // Neighbor information of the mesh without considering the crack (serves to count how many connex pieces it is made of)
+ DataArrayInt *tmp00=0,*tmp11=0;
+ MEDCouplingUMesh::ComputeNeighborsOfCellsAdv(desc00,descI00,revDesc00,revDescI00, tmp00, tmp11);
+ DAInt neighInit00(tmp00);
+ DAInt neighIInit00(tmp11);
+ // Neighbor information of the mesh WITH the crack (some neighbors are removed):
DataArrayInt *idsTmp=0;
bool b=m01->areCellsIncludedIn(&otherDimM1OnSameCoords,2,idsTmp);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ids(idsTmp);
- if(!b)
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::findNodesToDuplicate : the given mdim-1 mesh in other is not a constituent of this !");
+ DAInt ids(idsTmp);
+ // In the neighbor information remove the connection between high dimension cells and its low level constituents which are part
+ // of the frontier given in parameter (i.e. the cells of low dimension from the group delimiting the crack):
MEDCouplingUMesh::RemoveIdsFromIndexedArrays(ids->begin(),ids->end(),desc00,descI00);
DataArrayInt *tmp0=0,*tmp1=0;
+ // Compute the neighbor of each cell in m0Part2, taking into account the broken link above. Two
+ // cells on either side of the crack (defined by the mesh of low dimension) are not neighbor anymore.
ComputeNeighborsOfCellsAdv(desc00,descI00,revDesc00,revDescI00,tmp0,tmp1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> neigh00(tmp0);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> neighI00(tmp1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellsToModifyConn0_torenum=MEDCouplingUMesh::ComputeSpreadZoneGradually(neigh00,neighI00);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellsToModifyConn1_torenum=cellsToModifyConn0_torenum->buildComplement(neighI00->getNumberOfTuples()-1);
- cellsToModifyConn0_torenum->transformWithIndArr(cellIdsRk1->begin(),cellIdsRk1->end());
- cellsToModifyConn1_torenum->transformWithIndArr(cellIdsRk1->begin(),cellIdsRk1->end());
+ DAInt neigh00(tmp0);
+ DAInt neighI00(tmp1);
+
+ // For each initial connex part of the sub-mesh (or said differently for each independent crack):
+ int seed = 0, nIter = 0;
+ int nIterMax = nCells2+1; // Safety net for the loop
+ DAInt hitCells = DataArrayInt::New(); hitCells->alloc(nCells2);
+ hitCells->fillWithValue(-1);
+ DAInt cellsToModifyConn0_torenum = DataArrayInt::New();
+ cellsToModifyConn0_torenum->alloc(0,1);
+ while (nIter < nIterMax)
+ {
+ DAInt t = hitCells->findIdsEqual(-1);
+ if (!t->getNumberOfTuples())
+ break;
+ // Connex zone without the crack (to compute the next seed really)
+ int dnu;
+ DAInt connexCheck = MEDCouplingUMesh::ComputeSpreadZoneGraduallyFromSeed(&seed, &seed+1, neighInit00,neighIInit00, -1, dnu);
+ int cnt = 0;
+ for (int * ptr = connexCheck->getPointer(); cnt < connexCheck->getNumberOfTuples(); ptr++, cnt++)
+ hitCells->setIJ(*ptr,0,1);
+ // Connex zone WITH the crack (to identify cells lying on either part of the crack)
+ DAInt spreadZone = MEDCouplingUMesh::ComputeSpreadZoneGraduallyFromSeed(&seed, &seed+1, neigh00,neighI00, -1, dnu);
+ cellsToModifyConn0_torenum = DataArrayInt::Aggregate(cellsToModifyConn0_torenum, spreadZone, 0);
+ // Compute next seed, i.e. a cell in another connex part, which was not covered by the previous iterations
+ DAInt comple = cellsToModifyConn0_torenum->buildComplement(nCells2);
+ DAInt nonHitCells = hitCells->findIdsEqual(-1);
+ DAInt intersec = nonHitCells->buildIntersection(comple);
+ if (intersec->getNumberOfTuples())
+ { seed = intersec->getIJ(0,0); }
+ else
+ { break; }
+ nIter++;
+ }
+ if (nIter >= nIterMax)
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::findNodesToDuplicate(): internal error - too many iterations.");
+
+ DAInt cellsToModifyConn1_torenum=cellsToModifyConn0_torenum->buildComplement(neighI00->getNumberOfTuples()-1);
+ cellsToModifyConn0_torenum->transformWithIndArr(cellsAroundGroup->begin(),cellsAroundGroup->end());
+ cellsToModifyConn1_torenum->transformWithIndArr(cellsAroundGroup->begin(),cellsAroundGroup->end());
//
cellIdsNeededToBeRenum=cellsToModifyConn0_torenum.retn();
cellIdsNotModified=cellsToModifyConn1_torenum.retn();
- nodeIdsToDuplicate=s3.retn();
+ nodeIdsToDuplicate=dupl.retn();
}
/*!
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::renumberNodesInConn(map) : presence in connectivity for cell #" << i << " of node #" << node << " : Not in map !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
}
* \warning This method performs no check of validity of new ids. **Use it with care !**
* \param [in] newNodeNumbersO2N - a permutation array, of length \a
* this->getNumberOfNodes(), in "Old to New" mode.
- * See \ref MEDCouplingArrayRenumbering for more info on renumbering modes.
+ * See \ref numbering for more info on renumbering modes.
* \throw If the nodal connectivity of cells is not defined.
*
* \if ENABLE_EXAMPLES
/*!
* This method renumbers nodes \b in \b connectivity \b only \b without \b any \b reference \b to \b coords.
* This method performs no check on the fact that new coordinate ids are valid. \b Use \b it \b with \b care !
- * This method is an specialization of \ref ParaMEDMEM::MEDCouplingUMesh::renumberNodesInConn "renumberNodesInConn method".
+ * This method is an specialization of \ref MEDCoupling::MEDCouplingUMesh::renumberNodesInConn "renumberNodesInConn method".
*
* \param [in] delta specifies the shift size applied to nodeId in nodal connectivity in \b this.
*/
* should be contained in[0;this->getNumberOfCells()).
*
* \param [in] old2NewBg is expected to be a dynamically allocated pointer of size at least equal to this->getNumberOfCells()
+ * \param check
*/
void MEDCouplingUMesh::renumberCells(const int *old2NewBg, bool check)
{
//
const int *conn=_nodal_connec->getConstPointer();
const int *connI=_nodal_connec_index->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> o2n=DataArrayInt::New(); o2n->useArray(array,false,C_DEALLOC,nbCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> n2o=o2n->invertArrayO2N2N2O(nbCells);
+ MCAuto<DataArrayInt> o2n=DataArrayInt::New(); o2n->useArray(array,false,C_DEALLOC,nbCells,1);
+ MCAuto<DataArrayInt> n2o=o2n->invertArrayO2N2N2O(nbCells);
const int *n2oPtr=n2o->begin();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New();
newConn->alloc(_nodal_connec->getNumberOfTuples(),_nodal_connec->getNumberOfComponents());
newConn->copyStringInfoFrom(*_nodal_connec);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConnI=DataArrayInt::New();
newConnI->alloc(_nodal_connec_index->getNumberOfTuples(),_nodal_connec_index->getNumberOfComponents());
newConnI->copyStringInfoFrom(*_nodal_connec_index);
//
*/
DataArrayInt *MEDCouplingUMesh::getCellsInBoundingBox(const double *bbox, double eps) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> elems=DataArrayInt::New(); elems->alloc(0,1);
+ MCAuto<DataArrayInt> elems=DataArrayInt::New(); elems->alloc(0,1);
if(getMeshDimension()==-1)
{
elems->pushBackSilent(0);
*/
DataArrayInt *MEDCouplingUMesh::getCellsInBoundingBox(const INTERP_KERNEL::DirectedBoundingBox& bbox, double eps)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> elems=DataArrayInt::New(); elems->alloc(0,1);
+ MCAuto<DataArrayInt> elems=DataArrayInt::New(); elems->alloc(0,1);
if(getMeshDimension()==-1)
{
elems->pushBackSilent(0);
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::getTypeOfCell : Requesting type of cell #" << cellId << " but it should be in [0," << _nodal_connec_index->getNbOfElems()-1 << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
DataArrayInt *MEDCouplingUMesh::giveCellsWithType(INTERP_KERNEL::NormalizedCellType type) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayInt> ret=DataArrayInt::New();
ret->alloc(0,1);
checkConnectivityFullyDefined();
int nbCells=getNumberOfCells();
int mdim=getMeshDimension();
if(mdim<0)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::buildSetInstanceFromThis : invalid mesh dimension ! Should be >= 0 !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName(),mdim);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp1,tmp2;
+ MCAuto<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName(),mdim);
+ MCAuto<DataArrayInt> tmp1,tmp2;
bool needToCpyCT=true;
if(!_nodal_connec)
{
ret->_types=_types;
if(!_coords)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coords=DataArrayDouble::New(); coords->alloc(0,spaceDim);
+ MCAuto<DataArrayDouble> coords=DataArrayDouble::New(); coords->alloc(0,spaceDim);
ret->setCoords(coords);
}
else
}
/*!
- * Defines the nodal connectivity using given connectivity arrays. Optionally updates
+ * Defines the nodal connectivity using given connectivity arrays in \ref numbering-indirect format.
+ * Optionally updates
* a set of types of cells constituting \a this mesh.
* This method is for advanced users having prepared their connectivity before. For
* more info on using this method see \ref MEDCouplingUMeshAdvBuild.
}
/*!
- * Copy constructor. If 'deepCpy' is false \a this is a shallow copy of other.
+ * Copy constructor. If 'deepCopy' is false \a this is a shallow copy of other.
* If 'deeCpy' is true all arrays (coordinates and connectivities) are deeply copied.
*/
MEDCouplingUMesh::MEDCouplingUMesh(const MEDCouplingUMesh& other, bool deepCopy):MEDCouplingPointSet(other,deepCopy),_mesh_dim(other._mesh_dim),
_types(other._types)
{
if(other._nodal_connec)
- _nodal_connec=other._nodal_connec->performCpy(deepCopy);
+ _nodal_connec=other._nodal_connec->performCopyOrIncrRef(deepCopy);
if(other._nodal_connec_index)
- _nodal_connec_index=other._nodal_connec_index->performCpy(deepCopy);
+ _nodal_connec_index=other._nodal_connec_index->performCopyOrIncrRef(deepCopy);
}
MEDCouplingUMesh::~MEDCouplingUMesh()
*/
void MEDCouplingUMesh::computeTypes()
{
- if(_nodal_connec && _nodal_connec_index)
- {
- _types.clear();
- const int *conn=_nodal_connec->getConstPointer();
- const int *connIndex=_nodal_connec_index->getConstPointer();
- int nbOfElem=_nodal_connec_index->getNbOfElems()-1;
- if (nbOfElem > 0)
- for(const int *pt=connIndex;pt !=connIndex+nbOfElem;pt++)
- _types.insert((INTERP_KERNEL::NormalizedCellType)conn[*pt]);
- }
+ ComputeAllTypesInternal(_types,_nodal_connec,_nodal_connec_index);
}
/*!
/*!
* Returns a dimension of \a this mesh, i.e. a dimension of cells constituting \a this
- * mesh. For more info see \ref MEDCouplingMeshesPage.
+ * mesh. For more info see \ref meshes.
* \return int - the dimension of \a this mesh.
* \throw If the mesh dimension is not defined using setMeshDimension().
*/
* user. For more info see \ref MEDCouplingUMeshNodalConnectivity.
* \return int - the length of the nodal connectivity array.
*/
-int MEDCouplingUMesh::getMeshLength() const
+int MEDCouplingUMesh::getNodalConnectivityArrayLen() const
{
return _nodal_connec->getNbOfElems();
}
tinyInfo.push_back(getMeshDimension());
tinyInfo.push_back(getNumberOfCells());
if(_nodal_connec)
- tinyInfo.push_back(getMeshLength());
+ tinyInfo.push_back(getNodalConnectivityArrayLen());
else
tinyInfo.push_back(-1);
}
/*!
* Second step of serialization process.
* \param tinyInfo must be equal to the result given by getTinySerializationInformation method.
+ * \param a1
+ * \param a2
+ * \param littleStrings
*/
void MEDCouplingUMesh::resizeForUnserialization(const std::vector<int>& tinyInfo, DataArrayInt *a1, DataArrayDouble *a2, std::vector<std::string>& littleStrings) const
{
if(getMeshDimension()>-1)
{
a1=DataArrayInt::New();
- a1->alloc(getMeshLength()+getNumberOfCells()+1,1);
+ a1->alloc(getNodalConnectivityArrayLen()+getNumberOfCells()+1,1);
int *ptA1=a1->getPointer();
const int *conn=getNodalConnectivity()->getConstPointer();
const int *index=getNodalConnectivityIndex()->getConstPointer();
ptA1=std::copy(index,index+getNumberOfCells()+1,ptA1);
- std::copy(conn,conn+getMeshLength(),ptA1);
+ std::copy(conn,conn+getNodalConnectivityArrayLen(),ptA1);
}
else
a1=0;
{
// Connectivity
const int *recvBuffer=a1->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> myConnecIndex=DataArrayInt::New();
+ MCAuto<DataArrayInt> myConnecIndex=DataArrayInt::New();
myConnecIndex->alloc(tinyInfo[6]+1,1);
std::copy(recvBuffer,recvBuffer+tinyInfo[6]+1,myConnecIndex->getPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> myConnec=DataArrayInt::New();
+ MCAuto<DataArrayInt> myConnec=DataArrayInt::New();
myConnec->alloc(tinyInfo[7],1);
std::copy(recvBuffer+tinyInfo[6]+1,recvBuffer+tinyInfo[6]+1+tinyInfo[7],myConnec->getPointer());
setConnectivity(myConnec, myConnecIndex);
}
/*!
- * This is the low algorithm of MEDCouplingUMesh::buildPartOfMySelf2.
+ * This is the low algorithm of MEDCouplingUMesh::buildPartOfMySelfSlice.
* CellIds are given using range specified by a start an end and step.
*/
-MEDCouplingPointSet *MEDCouplingUMesh::buildPartOfMySelfKeepCoords2(int start, int end, int step) const
+MEDCouplingUMesh *MEDCouplingUMesh::buildPartOfMySelfKeepCoordsSlice(int start, int end, int step) const
{
checkFullyDefined();
int ncell=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New();
+ MCAuto<MEDCouplingUMesh> ret=MEDCouplingUMesh::New();
ret->_mesh_dim=_mesh_dim;
ret->setCoords(_coords);
- int newNbOfCells=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCouplingUMesh::buildPartOfMySelfKeepCoords2 : ");
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New(); newConnI->alloc(newNbOfCells+1,1);
+ int newNbOfCells=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCouplingUMesh::buildPartOfMySelfKeepCoordsSlice : ");
+ MCAuto<DataArrayInt> newConnI=DataArrayInt::New(); newConnI->alloc(newNbOfCells+1,1);
int *newConnIPtr=newConnI->getPointer(); *newConnIPtr=0;
int work=start;
const int *conn=_nodal_connec->getConstPointer();
}
else
{
- std::ostringstream oss; oss << "MEDCouplingUMesh::buildPartOfMySelfKeepCoords2 : On pos #" << i << " input cell id =" << work << " should be in [0," << ncell << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ std::ostringstream oss; oss << "MEDCouplingUMesh::buildPartOfMySelfKeepCoordsSlice : On pos #" << i << " input cell id =" << work << " should be in [0," << ncell << ") !";
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(newConnIPtr[0],1);
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(newConnIPtr[0],1);
int *newConnPtr=newConn->getPointer();
std::set<INTERP_KERNEL::NormalizedCellType> types;
work=start;
* Keeps from \a this only cells which constituing point id are in the ids specified by [ \a begin,\a end ).
* The return newly allocated mesh will share the same coordinates as \a this.
*/
-MEDCouplingPointSet *MEDCouplingUMesh::buildPartOfMySelfKeepCoords(const int *begin, const int *end) const
+MEDCouplingUMesh *MEDCouplingUMesh::buildPartOfMySelfKeepCoords(const int *begin, const int *end) const
{
checkConnectivityFullyDefined();
int ncell=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New();
+ MCAuto<MEDCouplingUMesh> ret=MEDCouplingUMesh::New();
ret->_mesh_dim=_mesh_dim;
ret->setCoords(_coords);
std::size_t nbOfElemsRet=std::distance(begin,end);
{
free(connIndexRet);
std::ostringstream oss; oss << "MEDCouplingUMesh::buildPartOfMySelfKeepCoords : On pos #" << std::distance(begin,work) << " input cell id =" << *work << " should be in [0," << ncell << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
int *connRet=(int *)malloc(connIndexRet[nbOfElemsRet]*sizeof(int));
types.insert((INTERP_KERNEL::NormalizedCellType)conn[connIndex[*work]]);
connRetWork=std::copy(conn+connIndex[*work],conn+connIndex[*work+1],connRetWork);
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> connRetArr=DataArrayInt::New();
+ MCAuto<DataArrayInt> connRetArr=DataArrayInt::New();
connRetArr->useArray(connRet,true,C_DEALLOC,connIndexRet[nbOfElemsRet],1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> connIndexRetArr=DataArrayInt::New();
+ MCAuto<DataArrayInt> connIndexRetArr=DataArrayInt::New();
connIndexRetArr->useArray(connIndexRet,true,C_DEALLOC,(int)nbOfElemsRet+1,1);
ret->setConnectivity(connRetArr,connIndexRetArr,false);
ret->_types=types;
std::string name="MeasureOfMesh_";
name+=getName();
int nbelem=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> field=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
+ MCAuto<MEDCouplingFieldDouble> field=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
field->setName(name);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> array=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> array=DataArrayDouble::New();
array->alloc(nbelem,1);
double *area_vol=array->getPointer();
field->setArray(array) ; array=0;
std::string name="PartMeasureOfMesh_";
name+=getName();
int nbelem=(int)std::distance(begin,end);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> array=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> array=DataArrayDouble::New();
array->setName(name);
array->alloc(nbelem,1);
double *area_vol=array->getPointer();
*/
MEDCouplingFieldDouble *MEDCouplingUMesh::getMeasureFieldOnNode(bool isAbs) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> tmp=getMeasureField(isAbs);
+ MCAuto<MEDCouplingFieldDouble> tmp=getMeasureField(isAbs);
std::string name="MeasureOnNodeOfMesh_";
name+=getName();
int nbNodes=getNumberOfNodes();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_NODES);
+ MCAuto<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_NODES);
double cst=1./((double)getMeshDimension()+1.);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> array=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> array=DataArrayDouble::New();
array->alloc(nbNodes,1);
double *valsToFill=array->getPointer();
std::fill(valsToFill,valsToFill+nbNodes,0.);
const double *values=tmp->getArray()->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> da=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> daInd=DataArrayInt::New();
+ MCAuto<DataArrayInt> da=DataArrayInt::New();
+ MCAuto<DataArrayInt> daInd=DataArrayInt::New();
getReverseNodalConnectivity(da,daInd);
const int *daPtr=da->getConstPointer();
const int *daIPtr=daInd->getConstPointer();
{
if((getMeshDimension()!=2) && (getMeshDimension()!=1 || getSpaceDimension()!=2))
throw INTERP_KERNEL::Exception("Expected a umesh with ( meshDim == 2 spaceDim == 2 or 3 ) or ( meshDim == 1 spaceDim == 2 ) !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> array=DataArrayDouble::New();
+ MCAuto<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
+ MCAuto<DataArrayDouble> array=DataArrayDouble::New();
int nbOfCells=getNumberOfCells();
int nbComp=getMeshDimension()+1;
array->alloc(nbOfCells,nbComp);
{
if(getSpaceDimension()==3)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> loc=getBarycenterAndOwner();
+ MCAuto<DataArrayDouble> loc=computeCellCenterOfMass();
const double *locPtr=loc->getConstPointer();
for(int i=0;i<nbOfCells;i++,vals+=3)
{
}
else
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> isAbs=getMeasureField(false);
+ MCAuto<MEDCouplingFieldDouble> isAbs=getMeasureField(false);
const double *isAbsPtr=isAbs->getArray()->begin();
for(int i=0;i<nbOfCells;i++,isAbsPtr++)
{ vals[3*i]=0.; vals[3*i+1]=0.; vals[3*i+2]=*isAbsPtr>0.?1.:-1.; }
{
if((getMeshDimension()!=2) && (getMeshDimension()!=1 || getSpaceDimension()!=2))
throw INTERP_KERNEL::Exception("Expected a umesh with ( meshDim == 2 spaceDim == 2 or 3 ) or ( meshDim == 1 spaceDim == 2 ) !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> array=DataArrayDouble::New();
+ MCAuto<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
+ MCAuto<DataArrayDouble> array=DataArrayDouble::New();
std::size_t nbelems=std::distance(begin,end);
int nbComp=getMeshDimension()+1;
array->alloc((int)nbelems,nbComp);
{
if(getSpaceDimension()==3)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> loc=getPartBarycenterAndOwner(begin,end);
+ MCAuto<DataArrayDouble> loc=getPartBarycenterAndOwner(begin,end);
const double *locPtr=loc->getConstPointer();
for(const int *i=begin;i!=end;i++,vals+=3,locPtr+=3)
{
throw INTERP_KERNEL::Exception("Expected a umesh with meshDim == 1 for buildDirectionVectorField !");
if(_types.size()!=1 || *(_types.begin())!=INTERP_KERNEL::NORM_SEG2)
throw INTERP_KERNEL::Exception("Expected a umesh with only NORM_SEG2 type of elements for buildDirectionVectorField !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> array=DataArrayDouble::New();
+ MCAuto<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
+ MCAuto<DataArrayDouble> array=DataArrayDouble::New();
int nbOfCells=getNumberOfCells();
int spaceDim=getSpaceDimension();
array->alloc(nbOfCells,spaceDim);
checkFullyDefined();
if(getMeshDimension()!=3 || getSpaceDimension()!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::buildSlice3D works on umeshes with meshdim equal to 3 and spaceDim equal to 3 too!");
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> candidates=getCellIdsCrossingPlane(origin,vec,eps);
+ MCAuto<DataArrayInt> candidates=getCellIdsCrossingPlane(origin,vec,eps);
if(candidates->empty())
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::buildSlice3D : No 3D cells in this intercepts the specified plane considering bounding boxes !");
std::vector<int> nodes;
DataArrayInt *cellIds1D=0;
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> subMesh=static_cast<MEDCouplingUMesh*>(buildPartOfMySelf(candidates->begin(),candidates->end(),false));
+ MCAuto<MEDCouplingUMesh> subMesh=static_cast<MEDCouplingUMesh*>(buildPartOfMySelf(candidates->begin(),candidates->end(),false));
subMesh->findNodesOnPlane(origin,vec,eps,nodes);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc1=DataArrayInt::New(),desc2=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> descIndx1=DataArrayInt::New(),descIndx2=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDesc1=DataArrayInt::New(),revDesc2=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDescIndx1=DataArrayInt::New(),revDescIndx2=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mDesc2=subMesh->buildDescendingConnectivity(desc2,descIndx2,revDesc2,revDescIndx2);//meshDim==2 spaceDim==3
+ MCAuto<DataArrayInt> desc1=DataArrayInt::New(),desc2=DataArrayInt::New();
+ MCAuto<DataArrayInt> descIndx1=DataArrayInt::New(),descIndx2=DataArrayInt::New();
+ MCAuto<DataArrayInt> revDesc1=DataArrayInt::New(),revDesc2=DataArrayInt::New();
+ MCAuto<DataArrayInt> revDescIndx1=DataArrayInt::New(),revDescIndx2=DataArrayInt::New();
+ MCAuto<MEDCouplingUMesh> mDesc2=subMesh->buildDescendingConnectivity(desc2,descIndx2,revDesc2,revDescIndx2);//meshDim==2 spaceDim==3
revDesc2=0; revDescIndx2=0;
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mDesc1=mDesc2->buildDescendingConnectivity(desc1,descIndx1,revDesc1,revDescIndx1);//meshDim==1 spaceDim==3
+ MCAuto<MEDCouplingUMesh> mDesc1=mDesc2->buildDescendingConnectivity(desc1,descIndx1,revDesc1,revDescIndx1);//meshDim==1 spaceDim==3
revDesc1=0; revDescIndx1=0;
mDesc1->fillCellIdsToKeepFromNodeIds(&nodes[0],&nodes[0]+nodes.size(),true,cellIds1D);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellIds1DTmp(cellIds1D);
+ MCAuto<DataArrayInt> cellIds1DTmp(cellIds1D);
//
std::vector<int> cut3DCurve(mDesc1->getNumberOfCells(),-2);
for(const int *it=cellIds1D->begin();it!=cellIds1D->end();it++)
AssemblyForSplitFrom3DCurve(cut3DCurve,nodes,mDesc2->getNodalConnectivity()->getConstPointer(),mDesc2->getNodalConnectivityIndex()->getConstPointer(),
mDesc1->getNodalConnectivity()->getConstPointer(),mDesc1->getNodalConnectivityIndex()->getConstPointer(),
desc1->getConstPointer(),descIndx1->getConstPointer(),cut3DSurf);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn(DataArrayInt::New()),connI(DataArrayInt::New()),cellIds2(DataArrayInt::New());
+ MCAuto<DataArrayInt> conn(DataArrayInt::New()),connI(DataArrayInt::New()),cellIds2(DataArrayInt::New());
connI->pushBackSilent(0); conn->alloc(0,1); cellIds2->alloc(0,1);
subMesh->assemblyForSplitFrom3DSurf(cut3DSurf,desc2->getConstPointer(),descIndx2->getConstPointer(),conn,connI,cellIds2);
if(cellIds2->empty())
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::buildSlice3D : No 3D cells in this intercepts the specified plane !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New("Slice3D",2);
+ MCAuto<MEDCouplingUMesh> ret=MEDCouplingUMesh::New("Slice3D",2);
ret->setCoords(mDesc1->getCoords());
ret->setConnectivity(conn,connI,true);
cellIds=candidates->selectByTupleId(cellIds2->begin(),cellIds2->end());
checkFullyDefined();
if(getMeshDimension()!=2 || getSpaceDimension()!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::buildSlice3DSurf works on umeshes with meshdim equal to 2 and spaceDim equal to 3 !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> candidates=getCellIdsCrossingPlane(origin,vec,eps);
+ MCAuto<DataArrayInt> candidates=getCellIdsCrossingPlane(origin,vec,eps);
if(candidates->empty())
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::buildSlice3DSurf : No 3D surf cells in this intercepts the specified plane considering bounding boxes !");
std::vector<int> nodes;
DataArrayInt *cellIds1D=0;
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> subMesh=static_cast<MEDCouplingUMesh*>(buildPartOfMySelf(candidates->begin(),candidates->end(),false));
+ MCAuto<MEDCouplingUMesh> subMesh=static_cast<MEDCouplingUMesh*>(buildPartOfMySelf(candidates->begin(),candidates->end(),false));
subMesh->findNodesOnPlane(origin,vec,eps,nodes);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc1=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> descIndx1=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDesc1=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDescIndx1=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mDesc1=subMesh->buildDescendingConnectivity(desc1,descIndx1,revDesc1,revDescIndx1);//meshDim==1 spaceDim==3
+ MCAuto<DataArrayInt> desc1=DataArrayInt::New();
+ MCAuto<DataArrayInt> descIndx1=DataArrayInt::New();
+ MCAuto<DataArrayInt> revDesc1=DataArrayInt::New();
+ MCAuto<DataArrayInt> revDescIndx1=DataArrayInt::New();
+ MCAuto<MEDCouplingUMesh> mDesc1=subMesh->buildDescendingConnectivity(desc1,descIndx1,revDesc1,revDescIndx1);//meshDim==1 spaceDim==3
mDesc1->fillCellIdsToKeepFromNodeIds(&nodes[0],&nodes[0]+nodes.size(),true,cellIds1D);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellIds1DTmp(cellIds1D);
+ MCAuto<DataArrayInt> cellIds1DTmp(cellIds1D);
//
std::vector<int> cut3DCurve(mDesc1->getNumberOfCells(),-2);
for(const int *it=cellIds1D->begin();it!=cellIds1D->end();it++)
AssemblyForSplitFrom3DCurve(cut3DCurve,nodes,subMesh->getNodalConnectivity()->getConstPointer(),subMesh->getNodalConnectivityIndex()->getConstPointer(),
mDesc1->getNodalConnectivity()->getConstPointer(),mDesc1->getNodalConnectivityIndex()->getConstPointer(),
desc1->getConstPointer(),descIndx1->getConstPointer(),cut3DSurf);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn(DataArrayInt::New()),connI(DataArrayInt::New()),cellIds2(DataArrayInt::New()); connI->pushBackSilent(0);
+ MCAuto<DataArrayInt> conn(DataArrayInt::New()),connI(DataArrayInt::New()),cellIds2(DataArrayInt::New()); connI->pushBackSilent(0);
conn->alloc(0,1);
const int *nodal=subMesh->getNodalConnectivity()->getConstPointer();
const int *nodalI=subMesh->getNodalConnectivityIndex()->getConstPointer();
}
if(cellIds2->empty())
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::buildSlice3DSurf : No 3DSurf cells in this intercepts the specified plane !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New("Slice3DSurf",1);
+ MCAuto<MEDCouplingUMesh> ret=MEDCouplingUMesh::New("Slice3DSurf",1);
ret->setCoords(mDesc1->getCoords());
ret->setConnectivity(conn,connI,true);
cellIds=candidates->selectByTupleId(cellIds2->begin(),cellIds2->end());
double vec2[3];
vec2[0]=vec[1]; vec2[1]=-vec[0]; vec2[2]=0.;//vec2 is the result of cross product of vec with (0,0,1)
double angle=acos(vec[2]/normm);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellIds;
+ MCAuto<DataArrayInt> cellIds;
double bbox[6];
if(angle>eps)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coo=_coords->deepCpy();
+ MCAuto<DataArrayDouble> coo=_coords->deepCopy();
double normm2(sqrt(vec2[0]*vec2[0]+vec2[1]*vec2[1]+vec2[2]*vec2[2]));
if(normm2/normm>1e-6)
MEDCouplingPointSet::Rotate3DAlg(origin,vec2,angle,coo->getNumberOfTuples(),coo->getPointer());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mw=clone(false);//false -> shallow copy
+ MCAuto<MEDCouplingUMesh> mw=clone(false);//false -> shallow copy
mw->setCoords(coo);
mw->getBoundingBox(bbox);
bbox[4]=origin[2]-eps; bbox[5]=origin[2]+eps;
* If not an exception will thrown. If this is an empty mesh with no cell an exception will be thrown too.
* No consideration of coordinate is done by this method.
* A 1D mesh is said contiguous if : a cell i with nodal connectivity (k,p) the cell i+1 the nodal connectivity should be (p,m)
- * If not false is returned. In case that false is returned a call to ParaMEDMEM::MEDCouplingUMesh::mergeNodes could be usefull.
+ * If not false is returned. In case that false is returned a call to MEDCoupling::MEDCouplingUMesh::mergeNodes could be usefull.
*/
bool MEDCouplingUMesh::isContiguous1D() const
{
throw INTERP_KERNEL::Exception("Expected a umesh with only NORM_SEG2 type of elements for project1D !");
if(getSpaceDimension()!=3)
throw INTERP_KERNEL::Exception("Expected a umesh with spaceDim==3 for project1D !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> f=buildDirectionVectorField();
+ MCAuto<MEDCouplingFieldDouble> f=buildDirectionVectorField();
const double *fPtr=f->getArray()->getConstPointer();
double tmp[3];
for(int i=0;i<getNumberOfCells();i++)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::distanceToPoint : only mesh dimension 2 and 1 are implemented !");
checkFullyDefined();
if((int)std::distance(ptBg,ptEnd)!=spaceDim)
- { std::ostringstream oss; oss << "MEDCouplingUMesh::distanceToPoint : input point has to have dimension equal to the space dimension of this (" << spaceDim << ") !"; throw INTERP_KERNEL::Exception(oss.str().c_str()); }
+ { std::ostringstream oss; oss << "MEDCouplingUMesh::distanceToPoint : input point has to have dimension equal to the space dimension of this (" << spaceDim << ") !"; throw INTERP_KERNEL::Exception(oss.str()); }
DataArrayInt *ret1=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> pts=DataArrayDouble::New(); pts->useArray(ptBg,false,C_DEALLOC,1,spaceDim);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret0=distanceToPoints(pts,ret1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret1Safe(ret1);
+ MCAuto<DataArrayDouble> pts=DataArrayDouble::New(); pts->useArray(ptBg,false,C_DEALLOC,1,spaceDim);
+ MCAuto<DataArrayDouble> ret0=distanceToPoints(pts,ret1);
+ MCAuto<DataArrayInt> ret1Safe(ret1);
cellId=*ret1Safe->begin();
return *ret0->begin();
}
if(pts->getNumberOfComponents()!=spaceDim)
{
std::ostringstream oss; oss << "MEDCouplingUMesh::distanceToPoints : input pts DataArrayDouble has " << pts->getNumberOfComponents() << " components whereas it should be equal to " << spaceDim << " (mesh spaceDimension) !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
checkFullyDefined();
int nbCells=getNumberOfCells();
if(nbCells==0)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::distanceToPoints : no cells in this !");
int nbOfPts=pts->getNumberOfTuples();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret0=DataArrayDouble::New(); ret0->alloc(nbOfPts,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret1=DataArrayInt::New(); ret1->alloc(nbOfPts,1);
+ MCAuto<DataArrayDouble> ret0=DataArrayDouble::New(); ret0->alloc(nbOfPts,1);
+ MCAuto<DataArrayInt> ret1=DataArrayInt::New(); ret1->alloc(nbOfPts,1);
const int *nc=_nodal_connec->begin(),*ncI=_nodal_connec_index->begin(); const double *coords=_coords->begin();
double *ret0Ptr=ret0->getPointer(); int *ret1Ptr=ret1->getPointer(); const double *ptsPtr=pts->begin();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> bboxArr(getBoundingBoxForBBTree());
+ MCAuto<DataArrayDouble> bboxArr(getBoundingBoxForBBTree());
const double *bbox(bboxArr->begin());
switch(spaceDim)
{
return ret0.retn();
}
+/// @cond INTERNAL
+
/*!
* \param [in] pt the start pointer (included) of the coordinates of the point
* \param [in] cellIdsBg the start pointer (included) of cellIds
}
}
}
+/// @endcond
/*!
* Finds cells in contact with a ball (i.e. a point with precision).
*/
void MEDCouplingUMesh::getCellsContainingPoint(const double *pos, double eps, std::vector<int>& elts) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> eltsUg,eltsIndexUg;
+ MCAuto<DataArrayInt> eltsUg,eltsIndexUg;
getCellsContainingPoints(pos,1,eps,eltsUg,eltsIndexUg);
elts.clear(); elts.insert(elts.end(),eltsUg->begin(),eltsUg->end());
}
/// @cond INTERNAL
-namespace ParaMEDMEM
+namespace MEDCoupling
{
template<const int SPACEDIMM>
class DummyClsMCUG
// end
};
- INTERP_KERNEL::Edge *MEDCouplingUMeshBuildQPFromEdge2(INTERP_KERNEL::NormalizedCellType typ, const int *bg, const double *coords2D, std::map< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node>,int>& m)
+ INTERP_KERNEL::Edge *MEDCouplingUMeshBuildQPFromEdge2(INTERP_KERNEL::NormalizedCellType typ, const int *bg, const double *coords2D, std::map< MCAuto<INTERP_KERNEL::Node>,int>& m)
{
INTERP_KERNEL::Edge *ret(0);
- MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node> n0(new INTERP_KERNEL::Node(coords2D[2*bg[0]],coords2D[2*bg[0]+1])),n1(new INTERP_KERNEL::Node(coords2D[2*bg[1]],coords2D[2*bg[1]+1]));
+ MCAuto<INTERP_KERNEL::Node> n0(new INTERP_KERNEL::Node(coords2D[2*bg[0]],coords2D[2*bg[0]+1])),n1(new INTERP_KERNEL::Node(coords2D[2*bg[1]],coords2D[2*bg[1]+1]));
m[n0]=bg[0]; m[n1]=bg[1];
switch(typ)
{
template<int SPACEDIM>
void MEDCouplingUMesh::getCellsContainingPointsAlg(const double *coords, const double *pos, int nbOfPoints,
- double eps, MEDCouplingAutoRefCountObjectPtr<DataArrayInt>& elts, MEDCouplingAutoRefCountObjectPtr<DataArrayInt>& eltsIndex) const
+ double eps, MCAuto<DataArrayInt>& elts, MCAuto<DataArrayInt>& eltsIndex) const
{
elts=DataArrayInt::New(); eltsIndex=DataArrayInt::New(); eltsIndex->alloc(nbOfPoints+1,1); eltsIndex->setIJ(0,0,0); elts->alloc(0,1);
int *eltsIndexPtr(eltsIndex->getPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> bboxArr(getBoundingBoxForBBTree(eps));
+ MCAuto<DataArrayDouble> bboxArr(getBoundingBoxForBBTree(eps));
const double *bbox(bboxArr->begin());
int nbOfCells=getNumberOfCells();
const int *conn=_nodal_connec->getConstPointer();
* \endif
*/
void MEDCouplingUMesh::getCellsContainingPoints(const double *pos, int nbOfPoints, double eps,
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt>& elts, MEDCouplingAutoRefCountObjectPtr<DataArrayInt>& eltsIndex) const
+ MCAuto<DataArrayInt>& elts, MCAuto<DataArrayInt>& eltsIndex) const
{
int spaceDim=getSpaceDimension();
int mDim=getMeshDimension();
checkFullyDefined();
const double *coords=getCoords()->getConstPointer();
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> nodalConnecIndexOut=DataArrayInt::New();
+ MCAuto<DataArrayInt> nodalConnecIndexOut=DataArrayInt::New();
nodalConnecIndexOut->alloc(nbOfCells+1,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> nodalConnecOut(DataArrayInt::New());
+ MCAuto<DataArrayInt> nodalConnecOut(DataArrayInt::New());
int *workIndexOut=nodalConnecIndexOut->getPointer();
*workIndexOut=0;
const int *nodalConnecIn=_nodal_connec->getConstPointer();
const int *nodalConnecIndexIn=_nodal_connec_index->getConstPointer();
std::set<INTERP_KERNEL::NormalizedCellType> types;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> isChanged(DataArrayInt::New());
+ MCAuto<DataArrayInt> isChanged(DataArrayInt::New());
isChanged->alloc(0,1);
for(int i=0;i<nbOfCells;i++,workIndexOut++)
{
* This method is \b NOT const because it can modify \a this.
* \a this is expected to be an unstructured mesh with meshDim==2 and spaceDim==3. If not an exception will be thrown.
* \param mesh1D is an unstructured mesh with MeshDim==1 and spaceDim==3. If not an exception will be thrown.
- * \param policy specifies the type of extrusion chosen. \b 0 for translation (most simple),
- * \b 1 for translation and rotation around point of 'mesh1D'.
+ * \param policy specifies the type of extrusion chosen:
+ * - \b 0 for translation only (most simple): the cells of the 1D mesh represent the vectors along which the 2D mesh
+ * will be repeated to build each level
+ * - \b 1 for translation and rotation: the translation is done as above. For each level, an arc of circle is fitted on
+ * the 3 preceding points of the 1D mesh. The center of the arc is the center of rotation for each level, the rotation is done
+ * along an axis normal to the plane containing the arc, and finally the angle of rotation is defined by the first two points on the
+ * arc.
* \return an unstructured mesh with meshDim==3 and spaceDim==3. The returned mesh has the same coords than \a this.
*/
MEDCouplingUMesh *MEDCouplingUMesh::buildExtrudedMesh(const MEDCouplingUMesh *mesh1D, int policy)
else
throw INTERP_KERNEL::Exception("Invalid 2D mesh and 1D mesh because 2D mesh has quadratic cells and 1D is not fully quadratic !");
}
- zipCoords();
- int oldNbOfNodes=getNumberOfNodes();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> newCoords;
+ int oldNbOfNodes(getNumberOfNodes());
+ MCAuto<DataArrayDouble> newCoords;
switch(policy)
{
case 0:
throw INTERP_KERNEL::Exception("Not implemented extrusion policy : must be in (0) !");
}
setCoords(newCoords);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=buildExtrudedMeshFromThisLowLev(oldNbOfNodes,isQuad);
+ MCAuto<MEDCouplingUMesh> ret(buildExtrudedMeshFromThisLowLev(oldNbOfNodes,isQuad));
updateTime();
return ret.retn();
}
if(!addCoo.empty())
{
int newNbOfNodes=nnodes+((int)addCoo.size())/3;
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coo2=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> coo2=DataArrayDouble::New();
coo2->alloc(newNbOfNodes,3);
double *tmp=coo2->getPointer();
tmp=std::copy(_coords->begin(),_coords->end(),tmp);
int nbOf1DCells=mesh1D->getNumberOfCells();
if(nbOf1DCells<2)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::fillExtCoordsUsingTranslAndAutoRotation2D : impossible to detect any angle of rotation ! Change extrusion policy 1->0 !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> ret=DataArrayDouble::New();
int nbOfLevsInVec=nbOf1DCells+1;
ret->alloc(oldNbOfNodes*nbOfLevsInVec,2);
double *retPtr=ret->getPointer();
retPtr=std::copy(getCoords()->getConstPointer(),getCoords()->getConstPointer()+getCoords()->getNbOfElems(),retPtr);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> tmp=MEDCouplingUMesh::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> tmp2=getCoords()->deepCpy();
+ MCAuto<MEDCouplingUMesh> tmp=MEDCouplingUMesh::New();
+ MCAuto<DataArrayDouble> tmp2=getCoords()->deepCopy();
tmp->setCoords(tmp2);
const double *coo1D=mesh1D->getCoords()->getConstPointer();
const int *conn1D=mesh1D->getNodalConnectivity()->getConstPointer();
int nbOf1DCells=mesh1D->getNumberOfCells();
if(nbOf1DCells<2)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::fillExtCoordsUsingTranslAndAutoRotation3D : impossible to detect any angle of rotation ! Change extrusion policy 1->0 !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> ret=DataArrayDouble::New();
int nbOfLevsInVec=nbOf1DCells+1;
ret->alloc(oldNbOfNodes*nbOfLevsInVec,3);
double *retPtr=ret->getPointer();
retPtr=std::copy(getCoords()->getConstPointer(),getCoords()->getConstPointer()+getCoords()->getNbOfElems(),retPtr);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> tmp=MEDCouplingUMesh::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> tmp2=getCoords()->deepCpy();
+ MCAuto<MEDCouplingUMesh> tmp=MEDCouplingUMesh::New();
+ MCAuto<DataArrayDouble> tmp2=getCoords()->deepCopy();
tmp->setCoords(tmp2);
const double *coo1D=mesh1D->getCoords()->getConstPointer();
const int *conn1D=mesh1D->getNodalConnectivity()->getConstPointer();
*/
MEDCouplingUMesh *MEDCouplingUMesh::buildExtrudedMeshFromThisLowLev(int nbOfNodesOf1Lev, bool isQuad) const
{
- int nbOf1DCells=getNumberOfNodes()/nbOfNodesOf1Lev-1;
- int nbOf2DCells=getNumberOfCells();
- int nbOf3DCells=nbOf2DCells*nbOf1DCells;
- MEDCouplingUMesh *ret=MEDCouplingUMesh::New("Extruded",getMeshDimension()+1);
- const int *conn=_nodal_connec->getConstPointer();
- const int *connI=_nodal_connec_index->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New();
+ int nbOf1DCells(getNumberOfNodes()/nbOfNodesOf1Lev-1);
+ int nbOf2DCells(getNumberOfCells());
+ int nbOf3DCells(nbOf2DCells*nbOf1DCells);
+ MEDCouplingUMesh *ret(MEDCouplingUMesh::New("Extruded",getMeshDimension()+1));
+ const int *conn(_nodal_connec->begin()),*connI(_nodal_connec_index->begin());
+ MCAuto<DataArrayInt> newConn(DataArrayInt::New()),newConnI(DataArrayInt::New());
newConnI->alloc(nbOf3DCells+1,1);
- int *newConnIPtr=newConnI->getPointer();
+ int *newConnIPtr(newConnI->getPointer());
*newConnIPtr++=0;
std::vector<int> newc;
for(int j=0;j<nbOf2DCells;j++)
*newConnIPtr++=(int)newc.size();
}
newConn->alloc((int)(newc.size())*nbOf1DCells,1);
- int *newConnPtr=newConn->getPointer();
- int deltaPerLev=isQuad?2*nbOfNodesOf1Lev:nbOfNodesOf1Lev;
+ int *newConnPtr(newConn->getPointer());
+ int deltaPerLev(isQuad?2*nbOfNodesOf1Lev:nbOfNodesOf1Lev);
newConnIPtr=newConnI->getPointer();
for(int iz=0;iz<nbOf1DCells;iz++)
{
if(iz!=0)
std::transform(newConnIPtr+1,newConnIPtr+1+nbOf2DCells,newConnIPtr+1+iz*nbOf2DCells,std::bind2nd(std::plus<int>(),newConnIPtr[iz*nbOf2DCells]));
+ const int *posOfTypeOfCell(newConnIPtr);
for(std::vector<int>::const_iterator iter=newc.begin();iter!=newc.end();iter++,newConnPtr++)
{
- int icell=(int)(iter-newc.begin());
- if(std::find(newConnIPtr,newConnIPtr+nbOf2DCells,icell)==newConnIPtr+nbOf2DCells)
+ int icell((int)(iter-newc.begin()));//std::distance unfortunately cannot been called here in C++98
+ if(icell!=*posOfTypeOfCell)
{
if(*iter!=-1)
*newConnPtr=(*iter)+iz*deltaPerLev;
*newConnPtr=-1;
}
else
- *newConnPtr=(*iter);
+ {
+ *newConnPtr=*iter;
+ posOfTypeOfCell++;
+ }
}
}
ret->setConnectivity(newConn,newConnI,true);
}
if(delta==0)
return ;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConnI=DataArrayInt::New();
const int *icptr=_nodal_connec->getConstPointer();
- newConn->alloc(getMeshLength()-delta,1);
+ newConn->alloc(getNodalConnectivityArrayLen()-delta,1);
newConnI->alloc(nbOfCells+1,1);
int *ocptr=newConn->getPointer();
int *ociptr=newConnI->getPointer();
DataArrayDouble *coords=0;
std::set<INTERP_KERNEL::NormalizedCellType> types;
checkFullyDefined();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret,connSafe,connISafe;
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coordsSafe;
+ MCAuto<DataArrayInt> ret,connSafe,connISafe;
+ MCAuto<DataArrayDouble> coordsSafe;
int meshDim=getMeshDimension();
switch(conversionType)
{
return ret.retn();
}
+/*!
+ * Tessellates \a this 2D mesh by dividing not straight edges of quadratic faces,
+ * so that the number of cells remains the same. Quadratic faces are converted to
+ * polygons. This method works only for 2D meshes in
+ * 2D space. If no cells are quadratic (INTERP_KERNEL::NORM_QUAD8,
+ * INTERP_KERNEL::NORM_TRI6, INTERP_KERNEL::NORM_QPOLYG ), \a this mesh remains unchanged.
+ * \warning This method can lead to a huge amount of nodes if \a eps is very low.
+ * \param [in] eps - specifies the maximal angle (in radians) between 2 sub-edges of
+ * a polylinized edge constituting the input polygon.
+ * \throw If the coordinates array is not set.
+ * \throw If the nodal connectivity of cells is not defined.
+ * \throw If \a this->getMeshDimension() != 2.
+ * \throw If \a this->getSpaceDimension() != 2.
+ */
+void MEDCouplingUMesh::tessellate2D(double eps)
+{
+ int meshDim(getMeshDimension()),spaceDim(getSpaceDimension());
+ if(spaceDim!=2)
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::tessellate2D : works only with space dimension equal to 2 !");
+ switch(meshDim)
+ {
+ case 1:
+ return tessellate2DCurveInternal(eps);
+ case 2:
+ return tessellate2DInternal(eps);
+ default:
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::tessellate2D : mesh dimension must be in [1,2] !");
+ }
+}
+/*!
+ * Tessellates \a this 1D mesh in 2D space by dividing not straight quadratic edges.
+ * \warning This method can lead to a huge amount of nodes if \a eps is very low.
+ * \param [in] eps - specifies the maximal angle (in radian) between 2 sub-edges of
+ * a sub-divided edge.
+ * \throw If the coordinates array is not set.
+ * \throw If the nodal connectivity of cells is not defined.
+ * \throw If \a this->getMeshDimension() != 1.
+ * \throw If \a this->getSpaceDimension() != 2.
+ */
+
#if 0
/*!
* This method only works if \a this has spaceDimension equal to 2 and meshDimension also equal to 2.
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::splitSomeEdgesOf2DMesh : mesh1Desc must be the explosion of this with spaceDim=2 and meshDim = 1 !");
//DataArrayInt *out0(0),*outi0(0);
//MEDCouplingUMesh::ExtractFromIndexedArrays(idsInDesc2DToBeRefined->begin(),idsInDesc2DToBeRefined->end(),dd3,dd4,out0,outi0);
- //MEDCouplingAutoRefCountObjectPtr<DataArrayInt> out0s(out0),outi0s(outi0);
+ //MCAuto<DataArrayInt> out0s(out0),outi0s(outi0);
//out0s=out0s->buildUnique(); out0s->sort(true);
}
#endif
*/
DataArrayInt *MEDCouplingUMesh::convertLinearCellsToQuadratic1D0(DataArrayInt *&conn, DataArrayInt *&connI, DataArrayDouble *& coords, std::set<INTERP_KERNEL::NormalizedCellType>& types) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> bary=getBarycenterAndOwner();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(0,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New(); newConnI->alloc(1,1); newConnI->setIJ(0,0,0);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(0,1);
+ MCAuto<DataArrayDouble> bary=computeCellCenterOfMass();
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(0,1);
+ MCAuto<DataArrayInt> newConnI=DataArrayInt::New(); newConnI->alloc(1,1); newConnI->setIJ(0,0,0);
+ MCAuto<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(0,1);
int nbOfCells=getNumberOfCells();
int nbOfNodes=getNumberOfNodes();
const int *cPtr=_nodal_connec->getConstPointer();
newConn->pushBackValsSilent(cPtr+icPtr[0],cPtr+icPtr[1]);
}
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> tmp=bary->selectByTupleIdSafe(ret->begin(),ret->end());
+ MCAuto<DataArrayDouble> tmp=bary->selectByTupleIdSafe(ret->begin(),ret->end());
coords=DataArrayDouble::Aggregate(getCoords(),tmp); conn=newConn.retn(); connI=newConnI.retn();
return ret.retn();
}
DataArrayInt *MEDCouplingUMesh::convertLinearCellsToQuadratic2DAnd3D0(const MEDCouplingUMesh *m1D, const DataArrayInt *desc, const DataArrayInt *descI, DataArrayInt *&conn, DataArrayInt *&connI, DataArrayDouble *& coords, std::set<INTERP_KERNEL::NormalizedCellType>& types) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(0,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New(); newConnI->alloc(1,1); newConnI->setIJ(0,0,0);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(0,1);
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(0,1);
+ MCAuto<DataArrayInt> newConnI=DataArrayInt::New(); newConnI->alloc(1,1); newConnI->setIJ(0,0,0);
+ MCAuto<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(0,1);
//
const int *descPtr(desc->begin()),*descIPtr(descI->begin());
DataArrayInt *conn1D=0,*conn1DI=0;
std::set<INTERP_KERNEL::NormalizedCellType> types1D;
DataArrayDouble *coordsTmp=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret1D=m1D->convertLinearCellsToQuadratic1D0(conn1D,conn1DI,coordsTmp,types1D); ret1D=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coordsTmpSafe(coordsTmp);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn1DSafe(conn1D),conn1DISafe(conn1DI);
+ MCAuto<DataArrayInt> ret1D=m1D->convertLinearCellsToQuadratic1D0(conn1D,conn1DI,coordsTmp,types1D); ret1D=0;
+ MCAuto<DataArrayDouble> coordsTmpSafe(coordsTmp);
+ MCAuto<DataArrayInt> conn1DSafe(conn1D),conn1DISafe(conn1DI);
const int *c1DPtr=conn1D->begin();
const int *c1DIPtr=conn1DI->begin();
int nbOfCells=getNumberOfCells();
*/
DataArrayInt *MEDCouplingUMesh::convertLinearCellsToQuadratic2D0(DataArrayInt *&conn, DataArrayInt *&connI, DataArrayDouble *& coords, std::set<INTERP_KERNEL::NormalizedCellType>& types) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc(DataArrayInt::New()),descI(DataArrayInt::New()),tmp2(DataArrayInt::New()),tmp3(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m1D=buildDescendingConnectivity(desc,descI,tmp2,tmp3); tmp2=0; tmp3=0;
+ MCAuto<DataArrayInt> desc(DataArrayInt::New()),descI(DataArrayInt::New()),tmp2(DataArrayInt::New()),tmp3(DataArrayInt::New());
+ MCAuto<MEDCouplingUMesh> m1D=buildDescendingConnectivity(desc,descI,tmp2,tmp3); tmp2=0; tmp3=0;
return convertLinearCellsToQuadratic2DAnd3D0(m1D,desc,descI,conn,connI,coords,types);
}
DataArrayInt *MEDCouplingUMesh::convertLinearCellsToQuadratic2D1(DataArrayInt *&conn, DataArrayInt *&connI, DataArrayDouble *& coords, std::set<INTERP_KERNEL::NormalizedCellType>& types) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc(DataArrayInt::New()),descI(DataArrayInt::New()),tmp2(DataArrayInt::New()),tmp3(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m1D=buildDescendingConnectivity(desc,descI,tmp2,tmp3); tmp2=0; tmp3=0;
+ MCAuto<DataArrayInt> desc(DataArrayInt::New()),descI(DataArrayInt::New()),tmp2(DataArrayInt::New()),tmp3(DataArrayInt::New());
+ MCAuto<MEDCouplingUMesh> m1D=buildDescendingConnectivity(desc,descI,tmp2,tmp3); tmp2=0; tmp3=0;
//
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(0,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New(); newConnI->alloc(1,1); newConnI->setIJ(0,0,0);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(0,1);
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(0,1);
+ MCAuto<DataArrayInt> newConnI=DataArrayInt::New(); newConnI->alloc(1,1); newConnI->setIJ(0,0,0);
+ MCAuto<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(0,1);
//
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> bary=getBarycenterAndOwner();
+ MCAuto<DataArrayDouble> bary=computeCellCenterOfMass();
const int *descPtr(desc->begin()),*descIPtr(descI->begin());
DataArrayInt *conn1D=0,*conn1DI=0;
std::set<INTERP_KERNEL::NormalizedCellType> types1D;
DataArrayDouble *coordsTmp=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret1D=m1D->convertLinearCellsToQuadratic1D0(conn1D,conn1DI,coordsTmp,types1D); ret1D=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coordsTmpSafe(coordsTmp);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn1DSafe(conn1D),conn1DISafe(conn1DI);
+ MCAuto<DataArrayInt> ret1D=m1D->convertLinearCellsToQuadratic1D0(conn1D,conn1DI,coordsTmp,types1D); ret1D=0;
+ MCAuto<DataArrayDouble> coordsTmpSafe(coordsTmp);
+ MCAuto<DataArrayInt> conn1DSafe(conn1D),conn1DISafe(conn1DI);
const int *c1DPtr=conn1D->begin();
const int *c1DIPtr=conn1DI->begin();
int nbOfCells=getNumberOfCells();
newConn->pushBackValsSilent(cPtr+icPtr[0],cPtr+icPtr[1]);
}
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> tmp=bary->selectByTupleIdSafe(ret->begin(),ret->end());
+ MCAuto<DataArrayDouble> tmp=bary->selectByTupleIdSafe(ret->begin(),ret->end());
coords=DataArrayDouble::Aggregate(coordsTmpSafe,tmp); conn=newConn.retn(); connI=newConnI.retn();
return ret.retn();
}
*/
DataArrayInt *MEDCouplingUMesh::convertLinearCellsToQuadratic3D0(DataArrayInt *&conn, DataArrayInt *&connI, DataArrayDouble *& coords, std::set<INTERP_KERNEL::NormalizedCellType>& types) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc(DataArrayInt::New()),descI(DataArrayInt::New()),tmp2(DataArrayInt::New()),tmp3(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m1D=explode3DMeshTo1D(desc,descI,tmp2,tmp3); tmp2=0; tmp3=0;
+ MCAuto<DataArrayInt> desc(DataArrayInt::New()),descI(DataArrayInt::New()),tmp2(DataArrayInt::New()),tmp3(DataArrayInt::New());
+ MCAuto<MEDCouplingUMesh> m1D=explode3DMeshTo1D(desc,descI,tmp2,tmp3); tmp2=0; tmp3=0;
return convertLinearCellsToQuadratic2DAnd3D0(m1D,desc,descI,conn,connI,coords,types);
}
DataArrayInt *MEDCouplingUMesh::convertLinearCellsToQuadratic3D1(DataArrayInt *&conn, DataArrayInt *&connI, DataArrayDouble *& coords, std::set<INTERP_KERNEL::NormalizedCellType>& types) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc2(DataArrayInt::New()),desc2I(DataArrayInt::New()),tmp2(DataArrayInt::New()),tmp3(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m2D=buildDescendingConnectivityGen<MinusOneSonsGeneratorBiQuadratic>(desc2,desc2I,tmp2,tmp3,MEDCouplingFastNbrer); tmp2=0; tmp3=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc1(DataArrayInt::New()),desc1I(DataArrayInt::New()),tmp4(DataArrayInt::New()),tmp5(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m1D=explode3DMeshTo1D(desc1,desc1I,tmp4,tmp5); tmp4=0; tmp5=0;
+ MCAuto<DataArrayInt> desc2(DataArrayInt::New()),desc2I(DataArrayInt::New()),tmp2(DataArrayInt::New()),tmp3(DataArrayInt::New());
+ MCAuto<MEDCouplingUMesh> m2D=buildDescendingConnectivityGen<MinusOneSonsGeneratorBiQuadratic>(desc2,desc2I,tmp2,tmp3,MEDCouplingFastNbrer); tmp2=0; tmp3=0;
+ MCAuto<DataArrayInt> desc1(DataArrayInt::New()),desc1I(DataArrayInt::New()),tmp4(DataArrayInt::New()),tmp5(DataArrayInt::New());
+ MCAuto<MEDCouplingUMesh> m1D=explode3DMeshTo1D(desc1,desc1I,tmp4,tmp5); tmp4=0; tmp5=0;
//
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(0,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New(); newConnI->alloc(1,1); newConnI->setIJ(0,0,0);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(),ret2=DataArrayInt::New(); ret->alloc(0,1); ret2->alloc(0,1);
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(0,1);
+ MCAuto<DataArrayInt> newConnI=DataArrayInt::New(); newConnI->alloc(1,1); newConnI->setIJ(0,0,0);
+ MCAuto<DataArrayInt> ret=DataArrayInt::New(),ret2=DataArrayInt::New(); ret->alloc(0,1); ret2->alloc(0,1);
//
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> bary=getBarycenterAndOwner();
+ MCAuto<DataArrayDouble> bary=computeCellCenterOfMass();
const int *descPtr(desc1->begin()),*descIPtr(desc1I->begin()),*desc2Ptr(desc2->begin()),*desc2IPtr(desc2I->begin());
DataArrayInt *conn1D=0,*conn1DI=0,*conn2D=0,*conn2DI=0;
std::set<INTERP_KERNEL::NormalizedCellType> types1D,types2D;
DataArrayDouble *coordsTmp=0,*coordsTmp2=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret1D=m1D->convertLinearCellsToQuadratic1D0(conn1D,conn1DI,coordsTmp,types1D); ret1D=DataArrayInt::New(); ret1D->alloc(0,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn1DSafe(conn1D),conn1DISafe(conn1DI);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coordsTmpSafe(coordsTmp);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret2D=m2D->convertLinearCellsToQuadratic2D1(conn2D,conn2DI,coordsTmp2,types2D); ret2D=DataArrayInt::New(); ret2D->alloc(0,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coordsTmp2Safe(coordsTmp2);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn2DSafe(conn2D),conn2DISafe(conn2DI);
+ MCAuto<DataArrayInt> ret1D=m1D->convertLinearCellsToQuadratic1D0(conn1D,conn1DI,coordsTmp,types1D); ret1D=DataArrayInt::New(); ret1D->alloc(0,1);
+ MCAuto<DataArrayInt> conn1DSafe(conn1D),conn1DISafe(conn1DI);
+ MCAuto<DataArrayDouble> coordsTmpSafe(coordsTmp);
+ MCAuto<DataArrayInt> ret2D=m2D->convertLinearCellsToQuadratic2D1(conn2D,conn2DI,coordsTmp2,types2D); ret2D=DataArrayInt::New(); ret2D->alloc(0,1);
+ MCAuto<DataArrayDouble> coordsTmp2Safe(coordsTmp2);
+ MCAuto<DataArrayInt> conn2DSafe(conn2D),conn2DISafe(conn2DI);
const int *c1DPtr=conn1D->begin(),*c1DIPtr=conn1DI->begin(),*c2DPtr=conn2D->begin(),*c2DIPtr=conn2DI->begin();
int nbOfCells=getNumberOfCells();
const int *cPtr=_nodal_connec->getConstPointer();
if(typ2==INTERP_KERNEL::NORM_ERROR)
{
std::ostringstream oss; oss << "MEDCouplingUMesh::convertLinearCellsToQuadratic3D1 : On cell #" << i << " the linear cell type does not support advanced quadratization !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
types.insert(typ2); newConn->pushBackSilent(typ2);
newConn->pushBackValsSilent(cPtr+icPtr[0]+1,cPtr+icPtr[1]);
newConn->pushBackValsSilent(cPtr+icPtr[0],cPtr+icPtr[1]);
}
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> diffRet2D=ret2D->getDifferentValues();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> o2nRet2D=diffRet2D->invertArrayN2O2O2N(coordsTmp2Safe->getNumberOfTuples());
+ MCAuto<DataArrayInt> diffRet2D=ret2D->getDifferentValues();
+ MCAuto<DataArrayInt> o2nRet2D=diffRet2D->invertArrayN2O2O2N(coordsTmp2Safe->getNumberOfTuples());
coordsTmp2Safe=coordsTmp2Safe->selectByTupleId(diffRet2D->begin(),diffRet2D->end());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> tmp=bary->selectByTupleIdSafe(ret->begin(),ret->end());
+ MCAuto<DataArrayDouble> tmp=bary->selectByTupleIdSafe(ret->begin(),ret->end());
std::vector<const DataArrayDouble *> v(3); v[0]=coordsTmpSafe; v[1]=coordsTmp2Safe; v[2]=tmp;
int *c=newConn->getPointer();
const int *cI(newConnI->begin());
return ret.retn();
}
-/*!
- * Tessellates \a this 2D mesh by dividing not straight edges of quadratic faces,
- * so that the number of cells remains the same. Quadratic faces are converted to
- * polygons. This method works only for 2D meshes in
- * 2D space. If no cells are quadratic (INTERP_KERNEL::NORM_QUAD8,
- * INTERP_KERNEL::NORM_TRI6, INTERP_KERNEL::NORM_QPOLYG ), \a this mesh remains unchanged.
- * \warning This method can lead to a huge amount of nodes if \a eps is very low.
- * \param [in] eps - specifies the maximal angle (in radians) between 2 sub-edges of
- * a polylinized edge constituting the input polygon.
- * \throw If the coordinates array is not set.
- * \throw If the nodal connectivity of cells is not defined.
- * \throw If \a this->getMeshDimension() != 2.
- * \throw If \a this->getSpaceDimension() != 2.
- */
-void MEDCouplingUMesh::tessellate2D(double eps)
-{
- checkFullyDefined();
- if(getMeshDimension()!=2 || getSpaceDimension()!=2)
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::tessellate2D works on umeshes with meshdim equal to 2 and spaceDim equal to 2 too!");
- double epsa=fabs(eps);
- if(epsa<std::numeric_limits<double>::min())
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::tessellate2DCurve : epsilon is null ! Please specify a higher epsilon. If too tiny it can lead to a huge amount of nodes and memory !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc1=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> descIndx1=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDesc1=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revDescIndx1=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mDesc=buildDescendingConnectivity2(desc1,descIndx1,revDesc1,revDescIndx1);
- revDesc1=0; revDescIndx1=0;
- mDesc->tessellate2DCurve(eps);
- subDivide2DMesh(mDesc->_nodal_connec->getConstPointer(),mDesc->_nodal_connec_index->getConstPointer(),desc1->getConstPointer(),descIndx1->getConstPointer());
- setCoords(mDesc->getCoords());
-}
-
-/*!
- * Tessellates \a this 1D mesh in 2D space by dividing not straight quadratic edges.
- * \warning This method can lead to a huge amount of nodes if \a eps is very low.
- * \param [in] eps - specifies the maximal angle (in radian) between 2 sub-edges of
- * a sub-divided edge.
- * \throw If the coordinates array is not set.
- * \throw If the nodal connectivity of cells is not defined.
- * \throw If \a this->getMeshDimension() != 1.
- * \throw If \a this->getSpaceDimension() != 2.
- */
-void MEDCouplingUMesh::tessellate2DCurve(double eps)
-{
- checkFullyDefined();
- if(getMeshDimension()!=1 || getSpaceDimension()!=2)
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::tessellate2DCurve works on umeshes with meshdim equal to 1 and spaceDim equal to 2 too!");
- double epsa=fabs(eps);
- if(epsa<std::numeric_limits<double>::min())
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::tessellate2DCurve : epsilon is null ! Please specify a higher epsilon. If too tiny it can lead to a huge amount of nodes and memory !");
- INTERP_KERNEL::QUADRATIC_PLANAR::_arc_detection_precision=1.e-10;
- int nbCells=getNumberOfCells();
- int nbNodes=getNumberOfNodes();
- const int *conn=_nodal_connec->getConstPointer();
- const int *connI=_nodal_connec_index->getConstPointer();
- const double *coords=_coords->getConstPointer();
- std::vector<double> addCoo;
- std::vector<int> newConn;//no direct DataArrayInt because interface with Geometric2D
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI(DataArrayInt::New());
- newConnI->alloc(nbCells+1,1);
- int *newConnIPtr=newConnI->getPointer();
- *newConnIPtr=0;
- int tmp1[3];
- INTERP_KERNEL::Node *tmp2[3];
- std::set<INTERP_KERNEL::NormalizedCellType> types;
- for(int i=0;i<nbCells;i++,newConnIPtr++)
- {
- const INTERP_KERNEL::CellModel& cm=INTERP_KERNEL::CellModel::GetCellModel((INTERP_KERNEL::NormalizedCellType)conn[connI[i]]);
- if(cm.isQuadratic())
- {//assert(connI[i+1]-connI[i]-1==3)
- tmp1[0]=conn[connI[i]+1+0]; tmp1[1]=conn[connI[i]+1+1]; tmp1[2]=conn[connI[i]+1+2];
- tmp2[0]=new INTERP_KERNEL::Node(coords[2*tmp1[0]],coords[2*tmp1[0]+1]);
- tmp2[1]=new INTERP_KERNEL::Node(coords[2*tmp1[1]],coords[2*tmp1[1]+1]);
- tmp2[2]=new INTERP_KERNEL::Node(coords[2*tmp1[2]],coords[2*tmp1[2]+1]);
- INTERP_KERNEL::EdgeArcCircle *eac=INTERP_KERNEL::EdgeArcCircle::BuildFromNodes(tmp2[0],tmp2[2],tmp2[1]);
- if(eac)
- {
- eac->tesselate(tmp1,nbNodes,epsa,newConn,addCoo);
- types.insert((INTERP_KERNEL::NormalizedCellType)newConn[newConnIPtr[0]]);
- delete eac;
- newConnIPtr[1]=(int)newConn.size();
- }
- else
- {
- types.insert(INTERP_KERNEL::NORM_SEG2);
- newConn.push_back(INTERP_KERNEL::NORM_SEG2);
- newConn.insert(newConn.end(),conn+connI[i]+1,conn+connI[i]+3);
- newConnIPtr[1]=newConnIPtr[0]+3;
- }
- }
- else
- {
- types.insert((INTERP_KERNEL::NormalizedCellType)conn[connI[i]]);
- newConn.insert(newConn.end(),conn+connI[i],conn+connI[i+1]);
- newConnIPtr[1]=newConnIPtr[0]+3;
- }
- }
- if(addCoo.empty() && ((int)newConn.size())==_nodal_connec->getNumberOfTuples())//nothing happens during tessellation : no update needed
- return ;
- _types=types;
- DataArrayInt::SetArrayIn(newConnI,_nodal_connec_index);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnArr=DataArrayInt::New();
- newConnArr->alloc((int)newConn.size(),1);
- std::copy(newConn.begin(),newConn.end(),newConnArr->getPointer());
- DataArrayInt::SetArrayIn(newConnArr,_nodal_connec);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> newCoords=DataArrayDouble::New();
- newCoords->alloc(nbNodes+((int)addCoo.size())/2,2);
- double *work=std::copy(_coords->begin(),_coords->end(),newCoords->getPointer());
- std::copy(addCoo.begin(),addCoo.end(),work);
- DataArrayDouble::SetArrayIn(newCoords,_coords);
- updateTime();
-}
-
/*!
* Divides every cell of \a this mesh into simplices (triangles in 2D and tetrahedra in 3D).
* In addition, returns an array mapping new cells to old ones. <br>
* The semantic of \a policy is:
* - 0 - to split QUAD4 by cutting it along 0-2 diagonal (for 2D mesh only).
* - 1 - to split QUAD4 by cutting it along 1-3 diagonal (for 2D mesh only).
- * - INTERP_KERNEL::PLANAR_FACE_5 - to split HEXA8 into 5 TETRA4 (for 3D mesh only).
- * - INTERP_KERNEL::PLANAR_FACE_6 - to split HEXA8 into 6 TETRA4 (for 3D mesh only).
+ * - INTERP_KERNEL::PLANAR_FACE_5 - to split HEXA8 into 5 TETRA4 (for 3D mesh only - see INTERP_KERNEL::SplittingPolicy for an image).
+ * - INTERP_KERNEL::PLANAR_FACE_6 - to split HEXA8 into 6 TETRA4 (for 3D mesh only - see INTERP_KERNEL::SplittingPolicy for an image).
+ *
+ *
* \return DataArrayInt * - a new instance of DataArrayInt holding, for each new cell,
* an id of old cell producing it. The caller is to delete this array using
- * decrRef() as it is no more needed.
+ * decrRef() as it is no more needed.
+ *
* \throw If \a policy is 0 or 1 and \a this->getMeshDimension() != 2.
* \throw If \a policy is INTERP_KERNEL::PLANAR_FACE_5 or INTERP_KERNEL::PLANAR_FACE_6
* and \a this->getMeshDimension() != 3.
}
/*!
- * This method implements policy 0 of virtual method ParaMEDMEM::MEDCouplingUMesh::simplexize.
+ * This method implements policy 0 of virtual method MEDCoupling::MEDCouplingUMesh::simplexize.
*/
DataArrayInt *MEDCouplingUMesh::simplexizePol0()
{
if(getMeshDimension()!=2)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::simplexizePol0 : this policy is only available for mesh with meshdim == 2 !");
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayInt> ret=DataArrayInt::New();
int nbOfCutCells=getNumberOfCellsWithType(INTERP_KERNEL::NORM_QUAD4);
ret->alloc(nbOfCells+nbOfCutCells,1);
if(nbOfCutCells==0) { ret->iota(0); return ret.retn(); }
int *retPt=ret->getPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConnI=DataArrayInt::New();
newConnI->alloc(nbOfCells+nbOfCutCells+1,1);
- newConn->alloc(getMeshLength()+3*nbOfCutCells,1);
+ newConn->alloc(getNodalConnectivityArrayLen()+3*nbOfCutCells,1);
int *pt=newConn->getPointer();
int *ptI=newConnI->getPointer();
ptI[0]=0;
}
/*!
- * This method implements policy 1 of virtual method ParaMEDMEM::MEDCouplingUMesh::simplexize.
+ * This method implements policy 1 of virtual method MEDCoupling::MEDCouplingUMesh::simplexize.
*/
DataArrayInt *MEDCouplingUMesh::simplexizePol1()
{
if(getMeshDimension()!=2)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::simplexizePol0 : this policy is only available for mesh with meshdim == 2 !");
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayInt> ret=DataArrayInt::New();
int nbOfCutCells=getNumberOfCellsWithType(INTERP_KERNEL::NORM_QUAD4);
ret->alloc(nbOfCells+nbOfCutCells,1);
if(nbOfCutCells==0) { ret->iota(0); return ret.retn(); }
int *retPt=ret->getPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConnI=DataArrayInt::New();
newConnI->alloc(nbOfCells+nbOfCutCells+1,1);
- newConn->alloc(getMeshLength()+3*nbOfCutCells,1);
+ newConn->alloc(getNodalConnectivityArrayLen()+3*nbOfCutCells,1);
int *pt=newConn->getPointer();
int *ptI=newConnI->getPointer();
ptI[0]=0;
}
/*!
- * This method implements policy INTERP_KERNEL::PLANAR_FACE_5 of virtual method ParaMEDMEM::MEDCouplingUMesh::simplexize.
+ * This method implements policy INTERP_KERNEL::PLANAR_FACE_5 of virtual method MEDCoupling::MEDCouplingUMesh::simplexize.
*/
DataArrayInt *MEDCouplingUMesh::simplexizePlanarFace5()
{
if(getMeshDimension()!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::simplexizePlanarFace5 : this policy is only available for mesh with meshdim == 3 !");
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayInt> ret=DataArrayInt::New();
int nbOfCutCells=getNumberOfCellsWithType(INTERP_KERNEL::NORM_HEXA8);
ret->alloc(nbOfCells+4*nbOfCutCells,1);
if(nbOfCutCells==0) { ret->iota(0); return ret.retn(); }
int *retPt=ret->getPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConnI=DataArrayInt::New();
newConnI->alloc(nbOfCells+4*nbOfCutCells+1,1);
- newConn->alloc(getMeshLength()+16*nbOfCutCells,1);//21
+ newConn->alloc(getNodalConnectivityArrayLen()+16*nbOfCutCells,1);//21
int *pt=newConn->getPointer();
int *ptI=newConnI->getPointer();
ptI[0]=0;
}
/*!
- * This method implements policy INTERP_KERNEL::PLANAR_FACE_6 of virtual method ParaMEDMEM::MEDCouplingUMesh::simplexize.
+ * This method implements policy INTERP_KERNEL::PLANAR_FACE_6 of virtual method MEDCoupling::MEDCouplingUMesh::simplexize.
*/
DataArrayInt *MEDCouplingUMesh::simplexizePlanarFace6()
{
if(getMeshDimension()!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::simplexizePlanarFace6 : this policy is only available for mesh with meshdim == 3 !");
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayInt> ret=DataArrayInt::New();
int nbOfCutCells=getNumberOfCellsWithType(INTERP_KERNEL::NORM_HEXA8);
ret->alloc(nbOfCells+5*nbOfCutCells,1);
if(nbOfCutCells==0) { ret->iota(0); return ret.retn(); }
int *retPt=ret->getPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConnI=DataArrayInt::New();
newConnI->alloc(nbOfCells+5*nbOfCutCells+1,1);
- newConn->alloc(getMeshLength()+21*nbOfCutCells,1);
+ newConn->alloc(getNodalConnectivityArrayLen()+21*nbOfCutCells,1);
int *pt=newConn->getPointer();
int *ptI=newConnI->getPointer();
ptI[0]=0;
return ret.retn();
}
+/*!
+ * Tessellates \a this 2D mesh by dividing not straight edges of quadratic faces,
+ * so that the number of cells remains the same. Quadratic faces are converted to
+ * polygons. This method works only for 2D meshes in
+ * 2D space. If no cells are quadratic (INTERP_KERNEL::NORM_QUAD8,
+ * INTERP_KERNEL::NORM_TRI6, INTERP_KERNEL::NORM_QPOLYG ), \a this mesh remains unchanged.
+ * \warning This method can lead to a huge amount of nodes if \a eps is very low.
+ * \param [in] eps - specifies the maximal angle (in radians) between 2 sub-edges of
+ * a polylinized edge constituting the input polygon.
+ * \throw If the coordinates array is not set.
+ * \throw If the nodal connectivity of cells is not defined.
+ * \throw If \a this->getMeshDimension() != 2.
+ * \throw If \a this->getSpaceDimension() != 2.
+ */
+void MEDCouplingUMesh::tessellate2DInternal(double eps)
+{
+ checkFullyDefined();
+ if(getMeshDimension()!=2 || getSpaceDimension()!=2)
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::tessellate2DInternal works on umeshes with meshdim equal to 2 and spaceDim equal to 2 too!");
+ double epsa=fabs(eps);
+ if(epsa<std::numeric_limits<double>::min())
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::tessellate2DInternal : epsilon is null ! Please specify a higher epsilon. If too tiny it can lead to a huge amount of nodes and memory !");
+ MCAuto<DataArrayInt> desc1(DataArrayInt::New()),descIndx1(DataArrayInt::New()),revDesc1(DataArrayInt::New()),revDescIndx1(DataArrayInt::New());
+ MCAuto<MEDCouplingUMesh> mDesc(buildDescendingConnectivity2(desc1,descIndx1,revDesc1,revDescIndx1));
+ revDesc1=0; revDescIndx1=0;
+ mDesc->tessellate2D(eps);
+ subDivide2DMesh(mDesc->_nodal_connec->getConstPointer(),mDesc->_nodal_connec_index->getConstPointer(),desc1->getConstPointer(),descIndx1->getConstPointer());
+ setCoords(mDesc->getCoords());
+}
+
+/*!
+ * Tessellates \a this 1D mesh in 2D space by dividing not straight quadratic edges.
+ * \warning This method can lead to a huge amount of nodes if \a eps is very low.
+ * \param [in] eps - specifies the maximal angle (in radian) between 2 sub-edges of
+ * a sub-divided edge.
+ * \throw If the coordinates array is not set.
+ * \throw If the nodal connectivity of cells is not defined.
+ * \throw If \a this->getMeshDimension() != 1.
+ * \throw If \a this->getSpaceDimension() != 2.
+ */
+void MEDCouplingUMesh::tessellate2DCurveInternal(double eps)
+{
+ checkFullyDefined();
+ if(getMeshDimension()!=1 || getSpaceDimension()!=2)
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::tessellate2DCurveInternal works on umeshes with meshdim equal to 1 and spaceDim equal to 2 too!");
+ double epsa=fabs(eps);
+ if(epsa<std::numeric_limits<double>::min())
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::tessellate2DCurveInternal : epsilon is null ! Please specify a higher epsilon. If too tiny it can lead to a huge amount of nodes and memory !");
+ INTERP_KERNEL::QUADRATIC_PLANAR::_arc_detection_precision=1.e-10;
+ int nbCells=getNumberOfCells();
+ int nbNodes=getNumberOfNodes();
+ const int *conn=_nodal_connec->getConstPointer();
+ const int *connI=_nodal_connec_index->getConstPointer();
+ const double *coords=_coords->getConstPointer();
+ std::vector<double> addCoo;
+ std::vector<int> newConn;//no direct DataArrayInt because interface with Geometric2D
+ MCAuto<DataArrayInt> newConnI(DataArrayInt::New());
+ newConnI->alloc(nbCells+1,1);
+ int *newConnIPtr=newConnI->getPointer();
+ *newConnIPtr=0;
+ int tmp1[3];
+ INTERP_KERNEL::Node *tmp2[3];
+ std::set<INTERP_KERNEL::NormalizedCellType> types;
+ for(int i=0;i<nbCells;i++,newConnIPtr++)
+ {
+ const INTERP_KERNEL::CellModel& cm=INTERP_KERNEL::CellModel::GetCellModel((INTERP_KERNEL::NormalizedCellType)conn[connI[i]]);
+ if(cm.isQuadratic())
+ {//assert(connI[i+1]-connI[i]-1==3)
+ tmp1[0]=conn[connI[i]+1+0]; tmp1[1]=conn[connI[i]+1+1]; tmp1[2]=conn[connI[i]+1+2];
+ tmp2[0]=new INTERP_KERNEL::Node(coords[2*tmp1[0]],coords[2*tmp1[0]+1]);
+ tmp2[1]=new INTERP_KERNEL::Node(coords[2*tmp1[1]],coords[2*tmp1[1]+1]);
+ tmp2[2]=new INTERP_KERNEL::Node(coords[2*tmp1[2]],coords[2*tmp1[2]+1]);
+ INTERP_KERNEL::EdgeArcCircle *eac=INTERP_KERNEL::EdgeArcCircle::BuildFromNodes(tmp2[0],tmp2[2],tmp2[1]);
+ if(eac)
+ {
+ eac->tesselate(tmp1,nbNodes,epsa,newConn,addCoo);
+ types.insert((INTERP_KERNEL::NormalizedCellType)newConn[newConnIPtr[0]]);
+ delete eac;
+ newConnIPtr[1]=(int)newConn.size();
+ }
+ else
+ {
+ types.insert(INTERP_KERNEL::NORM_SEG2);
+ newConn.push_back(INTERP_KERNEL::NORM_SEG2);
+ newConn.insert(newConn.end(),conn+connI[i]+1,conn+connI[i]+3);
+ newConnIPtr[1]=newConnIPtr[0]+3;
+ }
+ }
+ else
+ {
+ types.insert((INTERP_KERNEL::NormalizedCellType)conn[connI[i]]);
+ newConn.insert(newConn.end(),conn+connI[i],conn+connI[i+1]);
+ newConnIPtr[1]=newConnIPtr[0]+3;
+ }
+ }
+ if(addCoo.empty() && ((int)newConn.size())==_nodal_connec->getNumberOfTuples())//nothing happens during tessellation : no update needed
+ return ;
+ _types=types;
+ DataArrayInt::SetArrayIn(newConnI,_nodal_connec_index);
+ MCAuto<DataArrayInt> newConnArr=DataArrayInt::New();
+ newConnArr->alloc((int)newConn.size(),1);
+ std::copy(newConn.begin(),newConn.end(),newConnArr->getPointer());
+ DataArrayInt::SetArrayIn(newConnArr,_nodal_connec);
+ MCAuto<DataArrayDouble> newCoords=DataArrayDouble::New();
+ newCoords->alloc(nbNodes+((int)addCoo.size())/2,2);
+ double *work=std::copy(_coords->begin(),_coords->end(),newCoords->getPointer());
+ std::copy(addCoo.begin(),addCoo.end(),work);
+ DataArrayDouble::SetArrayIn(newCoords,_coords);
+ updateTime();
+}
+
/*!
* This private method is used to subdivide edges of a mesh with meshdim==2. If \a this has no a meshdim equal to 2 an exception will be thrown.
* This method completly ignore coordinates.
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::subDivide2DMesh : On polygon #" << i << " edgeid #" << j << " subedges mismatch : end subedge k!=start subedge k+1 !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
else
connI[1]=newConnLgth;
}
//
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New();
+ MCAuto<DataArrayInt> newConn=DataArrayInt::New();
newConn->alloc(newConnLgth,1);
int *work=newConn->getPointer();
for(int i=0;i<nbOfCells;i++)
int nbOfCells=getNumberOfCells();
if(nbOfCells<1)
return ;
- int initMeshLgth=getMeshLength();
+ int initMeshLgth=getNodalConnectivityArrayLen();
int *conn=_nodal_connec->getPointer();
int *index=_nodal_connec_index->getPointer();
int posOfCurCell=0;
catch(INTERP_KERNEL::Exception& e)
{
std::ostringstream oss; oss << "Something wrong in polyhedron #" << i << " : " << e.what();
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
}
int *conn=_nodal_connec->getPointer();
const int *connI=_nodal_connec_index->getConstPointer();
const double *coo=getCoords()->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cells(DataArrayInt::New()); cells->alloc(0,1);
+ MCAuto<DataArrayInt> cells(DataArrayInt::New()); cells->alloc(0,1);
for(int i=0;i<nbOfCells;i++)
{
const INTERP_KERNEL::CellModel& cm=INTERP_KERNEL::CellModel::GetCellModel((INTERP_KERNEL::NormalizedCellType)conn[connI[i]]);
/*!
* This method is a faster method to correct orientation of all 3D cells in \a this.
* This method works only if \a this is a 3D mesh, that is to say a mesh with mesh dimension 3 and a space dimension 3.
- * This method makes the hypothesis that \a this a coherent that is to say MEDCouplingUMesh::checkCoherency2 should throw no exception.
+ * This method makes the hypothesis that \a this a coherent that is to say MEDCouplingUMesh::checkConsistency should throw no exception.
*
- * \ret a newly allocated int array with one components containing cell ids renumbered to fit the convention of MED (MED file and MEDCoupling)
+ * \return a newly allocated int array with one components containing cell ids renumbered to fit the convention of MED (MED file and MEDCoupling)
* \sa MEDCouplingUMesh::orientCorrectlyPolyhedrons,
*/
DataArrayInt *MEDCouplingUMesh::findAndCorrectBadOriented3DCells()
int *conn=_nodal_connec->getPointer();
const int *connI=_nodal_connec_index->getConstPointer();
const double *coordsPtr=_coords->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(0,1);
+ MCAuto<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(0,1);
for(int i=0;i<nbOfCells;i++)
{
INTERP_KERNEL::NormalizedCellType type=(INTERP_KERNEL::NormalizedCellType)conn[connI[i]];
*/
MEDCouplingFieldDouble *MEDCouplingUMesh::getEdgeRatioField() const
{
- checkCoherency();
+ checkConsistencyLight();
int spaceDim=getSpaceDimension();
int meshDim=getMeshDimension();
if(spaceDim!=2 && spaceDim!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::getEdgeRatioField : SpaceDimension must be equal to 2 or 3 !");
if(meshDim!=2 && meshDim!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::getEdgeRatioField : MeshDimension must be equal to 2 or 3 !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
+ MCAuto<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
ret->setMesh(this);
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> arr=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> arr=DataArrayDouble::New();
arr->alloc(nbOfCells,1);
double *pt=arr->getPointer();
ret->setArray(arr);//In case of throw to avoid mem leaks arr will be used after decrRef.
*/
MEDCouplingFieldDouble *MEDCouplingUMesh::getAspectRatioField() const
{
- checkCoherency();
+ checkConsistencyLight();
int spaceDim=getSpaceDimension();
int meshDim=getMeshDimension();
if(spaceDim!=2 && spaceDim!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::getAspectRatioField : SpaceDimension must be equal to 2 or 3 !");
if(meshDim!=2 && meshDim!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::getAspectRatioField : MeshDimension must be equal to 2 or 3 !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
+ MCAuto<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
ret->setMesh(this);
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> arr=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> arr=DataArrayDouble::New();
arr->alloc(nbOfCells,1);
double *pt=arr->getPointer();
ret->setArray(arr);//In case of throw to avoid mem leaks arr will be used after decrRef.
/*!
* Creates a new MEDCouplingFieldDouble holding Warping factor values of all
- * cells of \a this 2D mesh in 3D space. Currently cells of the following types are
+ * cells of \a this 2D mesh in 3D space. It is a measure of the "planarity" of 2D cell
+ * in 3D space. Currently only cells of the following types are
* treated: INTERP_KERNEL::NORM_QUAD4.
* For a cell of other type an exception is thrown.
+ * The warp field is computed as follows: let (a,b,c,d) be the points of the quad.
+ * Defining
+ * \f$t=\vec{da}\times\vec{ab}\f$,
+ * \f$u=\vec{ab}\times\vec{bc}\f$
+ * \f$v=\vec{bc}\times\vec{cd}\f$
+ * \f$w=\vec{cd}\times\vec{da}\f$, the warp is defined as \f$W^3\f$ with
+ * \f[
+ * W=min(\frac{t}{|t|}\cdot\frac{v}{|v|}, \frac{u}{|u|}\cdot\frac{w}{|w|})
+ * \f]
* \return MEDCouplingFieldDouble * - a new instance of MEDCouplingFieldDouble on
* cells and one time, lying on \a this mesh. The caller is to delete this
* field using decrRef() as it is no more needed.
*/
MEDCouplingFieldDouble *MEDCouplingUMesh::getWarpField() const
{
- checkCoherency();
+ checkConsistencyLight();
int spaceDim=getSpaceDimension();
int meshDim=getMeshDimension();
if(spaceDim!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::getWarpField : SpaceDimension must be equal to 3 !");
if(meshDim!=2)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::getWarpField : MeshDimension must be equal to 2 !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
+ MCAuto<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
ret->setMesh(this);
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> arr=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> arr=DataArrayDouble::New();
arr->alloc(nbOfCells,1);
double *pt=arr->getPointer();
ret->setArray(arr);//In case of throw to avoid mem leaks arr will be used after decrRef.
* Creates a new MEDCouplingFieldDouble holding Skew factor values of all
* cells of \a this 2D mesh in 3D space. Currently cells of the following types are
* treated: INTERP_KERNEL::NORM_QUAD4.
+ * The skew is computed as follow for a quad with points (a,b,c,d): let
+ * \f$u=\vec{ab}+\vec{dc}\f$ and \f$v=\vec{ac}+\vec{bd}\f$
+ * then the skew is computed as:
+ * \f[
+ * s=\frac{u}{|u|}\cdot\frac{v}{|v|}
+ * \f]
+ *
* For a cell of other type an exception is thrown.
* \return MEDCouplingFieldDouble * - a new instance of MEDCouplingFieldDouble on
* cells and one time, lying on \a this mesh. The caller is to delete this
*/
MEDCouplingFieldDouble *MEDCouplingUMesh::getSkewField() const
{
- checkCoherency();
+ checkConsistencyLight();
int spaceDim=getSpaceDimension();
int meshDim=getMeshDimension();
if(spaceDim!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::getSkewField : SpaceDimension must be equal to 3 !");
if(meshDim!=2)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::getSkewField : MeshDimension must be equal to 2 !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
+ MCAuto<MEDCouplingFieldDouble> ret=MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME);
ret->setMesh(this);
int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> arr=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> arr=DataArrayDouble::New();
arr->alloc(nbOfCells,1);
double *pt=arr->getPointer();
ret->setArray(arr);//In case of throw to avoid mem leaks arr will be used after decrRef.
}
/*!
- * This method aggregate the bbox of each cell and put it into bbox parameter.
+ * Returns the cell field giving for each cell in \a this its diameter. Diameter means the max length of all possible SEG2 in the cell.
+ *
+ * \return a new instance of field containing the result. The returned instance has to be deallocated by the caller.
+ *
+ * \sa getSkewField, getWarpField, getAspectRatioField, getEdgeRatioField
+ */
+MEDCouplingFieldDouble *MEDCouplingUMesh::computeDiameterField() const
+{
+ checkConsistencyLight();
+ MCAuto<MEDCouplingFieldDouble> ret(MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME));
+ ret->setMesh(this);
+ std::set<INTERP_KERNEL::NormalizedCellType> types;
+ ComputeAllTypesInternal(types,_nodal_connec,_nodal_connec_index);
+ int spaceDim(getSpaceDimension()),nbCells(getNumberOfCells());
+ MCAuto<DataArrayDouble> arr(DataArrayDouble::New());
+ arr->alloc(nbCells,1);
+ for(std::set<INTERP_KERNEL::NormalizedCellType>::const_iterator it=types.begin();it!=types.end();it++)
+ {
+ INTERP_KERNEL::AutoCppPtr<INTERP_KERNEL::DiameterCalculator> dc(INTERP_KERNEL::CellModel::GetCellModel(*it).buildInstanceOfDiameterCalulator(spaceDim));
+ MCAuto<DataArrayInt> cellIds(giveCellsWithType(*it));
+ dc->computeForListOfCellIdsUMeshFrmt(cellIds->begin(),cellIds->end(),_nodal_connec_index->begin(),_nodal_connec->begin(),getCoords()->begin(),arr->getPointer());
+ }
+ ret->setArray(arr);
+ ret->setName("Diameter");
+ return ret.retn();
+}
+
+/*!
+ * This method aggregate the bbox of each cell and put it into bbox parameter (xmin,xmax,ymin,ymax,zmin,zmax).
*
* \param [in] arcDetEps - a parameter specifying in case of 2D quadratic polygon cell the detection limit between linear and arc circle. (By default 1e-12)
* For all other cases this input parameter is ignored.
{
checkFullyDefined();
int spaceDim(getSpaceDimension()),nbOfCells(getNumberOfCells()),nbOfNodes(getNumberOfNodes());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret(DataArrayDouble::New()); ret->alloc(nbOfCells,2*spaceDim);
+ MCAuto<DataArrayDouble> ret(DataArrayDouble::New()); ret->alloc(nbOfCells,2*spaceDim);
double *bbox(ret->getPointer());
for(int i=0;i<nbOfCells*spaceDim;i++)
{
if(kk==0)
{
std::ostringstream oss; oss << "MEDCouplingUMesh::getBoundingBoxForBBTree : cell #" << i << " contains no valid nodeId !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
return ret.retn();
int spaceDim(getSpaceDimension()),mDim(getMeshDimension()),nbOfCells(getNumberOfCells());
if(spaceDim!=2 || mDim!=2)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::getBoundingBoxForBBTree2DQuadratic : This method should be applied on mesh with mesh dimension equal to 2 and space dimension also equal to 2!");
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret(DataArrayDouble::New()); ret->alloc(nbOfCells,2*spaceDim);
+ MCAuto<DataArrayDouble> ret(DataArrayDouble::New()); ret->alloc(nbOfCells,2*spaceDim);
double *bbox(ret->getPointer());
const double *coords(_coords->getConstPointer());
const int *conn(_nodal_connec->getConstPointer()),*connI(_nodal_connec_index->getConstPointer());
int spaceDim(getSpaceDimension()),mDim(getMeshDimension()),nbOfCells(getNumberOfCells());
if(spaceDim!=2 || mDim!=1)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::getBoundingBoxForBBTree1DQuadratic : This method should be applied on mesh with mesh dimension equal to 1 and space dimension also equal to 2!");
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret(DataArrayDouble::New()); ret->alloc(nbOfCells,2*spaceDim);
+ MCAuto<DataArrayDouble> ret(DataArrayDouble::New()); ret->alloc(nbOfCells,2*spaceDim);
double *bbox(ret->getPointer());
const double *coords(_coords->getConstPointer());
const int *conn(_nodal_connec->getConstPointer()),*connI(_nodal_connec_index->getConstPointer());
/// @cond INTERNAL
-namespace ParaMEDMEMImpl
+namespace MEDCouplingImpl
{
class ConnReader
{
{
std::ostringstream oss; oss << "MEDCouplingUMesh::getDistributionOfTypes : Type " << INTERP_KERNEL::CellModel::GetCellModel(typ).getRepr();
oss << " is not contiguous !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
types.insert(typ);
ret[3*i]=typ;
- const int *work2=std::find_if(work+1,connI+nbOfCells,ParaMEDMEMImpl::ConnReader(conn,typ));
+ const int *work2=std::find_if(work+1,connI+nbOfCells,MEDCouplingImpl::ConnReader(conn,typ));
ret[3*i+1]=(int)std::distance(work,work2);
work=work2;
}
if(types.size()==_types.size())
return 0;
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayInt> ret=DataArrayInt::New();
ret->alloc(nb,1);
int *retPtr=ret->getPointer();
const int *connI=_nodal_connec_index->getConstPointer();
int kk=0;
for(std::vector<INTERP_KERNEL::NormalizedCellType>::const_iterator it=types.begin();it!=types.end();it++,kk++)
{
- i=std::find_if(i,connI+nbOfCells,ParaMEDMEMImpl::ConnReader2(conn,(int)(*it)));
+ i=std::find_if(i,connI+nbOfCells,MEDCouplingImpl::ConnReader2(conn,(int)(*it)));
int offset=(int)std::distance(connI,i);
- const int *j=std::find_if(i+1,connI+nbOfCells,ParaMEDMEMImpl::ConnReader(conn,(int)(*it)));
+ const int *j=std::find_if(i+1,connI+nbOfCells,MEDCouplingImpl::ConnReader(conn,(int)(*it)));
int nbOfCellsOfCurType=(int)std::distance(i,j);
if(code[3*kk+2]==-1)
for(int k=0;k<nbOfCellsOfCurType;k++)
{
std::ostringstream oss; oss << "MEDCouplingUMesh::checkTypeConsistencyAndContig : the section " << kk << " points to the profile #" << idInIdsPerType;
oss << ", and this profile contains a value " << *k << " should be in [0," << nbOfCellsOfCurType << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
}
{
std::ostringstream oss; oss << "MEDCouplingUMesh::checkTypeConsistencyAndContig : at section " << kk << " of code it points to the array #" << idInIdsPerType;
oss << " should be in [0," << idsPerType.size() << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
i=j;
}
/*!
- * This method makes the hypothesis that \at this is sorted by type. If not an exception will be thrown.
+ * This method makes the hypothesis that \a this is sorted by type. If not an exception will be thrown.
* This method is the opposite of MEDCouplingUMesh::checkTypeConsistencyAndContig method. Given a list of cells in \a profile it returns a list of sub-profiles sorted by geo type.
* The result is put in the array \a idsPerType. In the returned parameter \a code, foreach i \a code[3*i+2] refers (if different from -1) to a location into the \a idsPerType.
* This method has 1 input \a profile and 3 outputs \a code \a idsInPflPerType and \a idsPerType.
*
+ * \param [in] profile
* \param [out] code is a vector of size 3*n where n is the number of different geometric type in \a this \b reduced to the profile \a profile. \a code has exactly the same semantic than in MEDCouplingUMesh::checkTypeConsistencyAndContig method.
* \param [out] idsInPflPerType is a vector of size of different geometric type in the subpart defined by \a profile of \a this ( equal to \a code.size()/3). For each i,
* \a idsInPflPerType[i] stores the tuple ids in \a profile that correspond to the geometric type code[3*i+0]
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::splitProfilePerType : current mesh is not sorted by type !");
}
types.push_back(curType);
- i=std::find_if(i+1,connI+nbOfCells,ParaMEDMEMImpl::ConnReader(conn,(int)curType));
+ i=std::find_if(i+1,connI+nbOfCells,MEDCouplingImpl::ConnReader(conn,(int)curType));
typeRangeVals.push_back((int)std::distance(connI,i));
}
//
DataArrayInt *castArr=0,*rankInsideCast=0,*castsPresent=0;
profile->splitByValueRange(&typeRangeVals[0],&typeRangeVals[0]+typeRangeVals.size(),castArr,rankInsideCast,castsPresent);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp0=castArr;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp1=rankInsideCast;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp2=castsPresent;
+ MCAuto<DataArrayInt> tmp0=castArr;
+ MCAuto<DataArrayInt> tmp1=rankInsideCast;
+ MCAuto<DataArrayInt> tmp2=castsPresent;
//
int nbOfCastsFinal=castsPresent->getNumberOfTuples();
code.resize(3*nbOfCastsFinal);
- std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > idsInPflPerType2;
- std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > idsPerType2;
+ std::vector< MCAuto<DataArrayInt> > idsInPflPerType2;
+ std::vector< MCAuto<DataArrayInt> > idsPerType2;
for(int i=0;i<nbOfCastsFinal;i++)
{
int castId=castsPresent->getIJ(i,0);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp3=castArr->getIdsEqual(castId);
+ MCAuto<DataArrayInt> tmp3=castArr->findIdsEqual(castId);
idsInPflPerType2.push_back(tmp3);
code[3*i]=(int)types[castId];
code[3*i+1]=tmp3->getNumberOfTuples();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp4=rankInsideCast->selectByTupleId(tmp3->getConstPointer(),tmp3->getConstPointer()+tmp3->getNumberOfTuples());
- if(tmp4->getNumberOfTuples()!=typeRangeVals[castId+1]-typeRangeVals[castId] || !tmp4->isIdentity())
+ MCAuto<DataArrayInt> tmp4=rankInsideCast->selectByTupleId(tmp3->getConstPointer(),tmp3->getConstPointer()+tmp3->getNumberOfTuples());
+ if(!tmp4->isIota(typeRangeVals[castId+1]-typeRangeVals[castId]))
{
tmp4->copyStringInfoFrom(*profile);
idsPerType2.push_back(tmp4);
* This method is here too emulate the MEDMEM behaviour on BDC (buildDescendingConnectivity). Hoping this method becomes deprecated very soon.
* This method make the assumption that \a this and 'nM1LevMesh' mesh lyies on same coords (same pointer) as MED and MEDMEM does.
* The following equality should be verified 'nM1LevMesh->getMeshDimension()==this->getMeshDimension()-1'
- * This method returns 5+2 elements. 'desc', 'descIndx', 'revDesc', 'revDescIndx' and 'meshnM1' behaves exactly as ParaMEDMEM::MEDCouplingUMesh::buildDescendingConnectivity except the content as described after. The returned array specifies the n-1 mesh reordered by type as MEDMEM does. 'nM1LevMeshIds' contains the ids in returned 'meshnM1'. Finally 'meshnM1Old2New' contains numbering old2new that is to say the cell #k in coarse 'nM1LevMesh' will have the number ret[k] in returned mesh 'nM1LevMesh' MEDMEM reordered.
+ * This method returns 5+2 elements. 'desc', 'descIndx', 'revDesc', 'revDescIndx' and 'meshnM1' behaves exactly as MEDCoupling::MEDCouplingUMesh::buildDescendingConnectivity except the content as described after. The returned array specifies the n-1 mesh reordered by type as MEDMEM does. 'nM1LevMeshIds' contains the ids in returned 'meshnM1'. Finally 'meshnM1Old2New' contains numbering old2new that is to say the cell #k in coarse 'nM1LevMesh' will have the number ret[k] in returned mesh 'nM1LevMesh' MEDMEM reordered.
*/
MEDCouplingUMesh *MEDCouplingUMesh::emulateMEDMEMBDC(const MEDCouplingUMesh *nM1LevMesh, DataArrayInt *desc, DataArrayInt *descIndx, DataArrayInt *&revDesc, DataArrayInt *&revDescIndx, DataArrayInt *& nM1LevMeshIds, DataArrayInt *&meshnM1Old2New) const
{
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::emulateMEDMEMBDC : The mesh passed as first argument should have a meshDim equal to this->getMeshDimension()-1 !" );
if(_coords!=nM1LevMesh->getCoords())
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::emulateMEDMEMBDC : 'this' and mesh in first argument should share the same coords : Use tryToShareSameCoords method !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp0=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp1=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret1=buildDescendingConnectivity(desc,descIndx,tmp0,tmp1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret0=ret1->sortCellsInMEDFileFrmt();
+ MCAuto<DataArrayInt> tmp0=DataArrayInt::New();
+ MCAuto<DataArrayInt> tmp1=DataArrayInt::New();
+ MCAuto<MEDCouplingUMesh> ret1=buildDescendingConnectivity(desc,descIndx,tmp0,tmp1);
+ MCAuto<DataArrayInt> ret0=ret1->sortCellsInMEDFileFrmt();
desc->transformWithIndArr(ret0->getConstPointer(),ret0->getConstPointer()+ret0->getNbOfElems());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> tmp=MEDCouplingUMesh::New();
+ MCAuto<MEDCouplingUMesh> tmp=MEDCouplingUMesh::New();
tmp->setConnectivity(tmp0,tmp1);
tmp->renumberCells(ret0->getConstPointer(),false);
revDesc=tmp->getNodalConnectivity();
ret->getMaxValue(tmp2);
ret->decrRef();
std::ostringstream oss; oss << "MEDCouplingUMesh::emulateMEDMEMBDC : input N-1 mesh present a cell not in descending mesh ... Id of cell is " << tmp2 << " !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
nM1LevMeshIds=ret;
//
DataArrayInt *MEDCouplingUMesh::sortCellsInMEDFileFrmt()
{
checkConnectivityFullyDefined();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=getRenumArrForMEDFileFrmt();
+ MCAuto<DataArrayInt> ret=getRenumArrForMEDFileFrmt();
renumberCells(ret->getConstPointer(),false);
return ret.retn();
}
if(types.find(curType)!=types.end())
return false;
types.insert(curType);
- i=std::find_if(i+1,connI+nbOfCells,ParaMEDMEMImpl::ConnReader(conn,(int)curType));
+ i=std::find_if(i+1,connI+nbOfCells,MEDCouplingImpl::ConnReader(conn,(int)curType));
}
return true;
}
if(pos<=lastPos)
return false;
lastPos=pos;
- i=std::find_if(i+1,connI+nbOfCells,ParaMEDMEMImpl::ConnReader(conn,(int)curType));
+ i=std::find_if(i+1,connI+nbOfCells,MEDCouplingImpl::ConnReader(conn,(int)curType));
}
else
{
if(sg.find(curType)==sg.end())
{
- i=std::find_if(i+1,connI+nbOfCells,ParaMEDMEMImpl::ConnReader(conn,(int)curType));
+ i=std::find_if(i+1,connI+nbOfCells,MEDCouplingImpl::ConnReader(conn,(int)curType));
sg.insert(curType);
}
else
int nbOfCells=getNumberOfCells();
const int *conn=_nodal_connec->getConstPointer();
const int *connI=_nodal_connec_index->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmpa=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmpb=DataArrayInt::New();
+ MCAuto<DataArrayInt> tmpa=DataArrayInt::New();
+ MCAuto<DataArrayInt> tmpb=DataArrayInt::New();
tmpa->alloc(nbOfCells,1);
tmpb->alloc((int)std::distance(orderBg,orderEnd),1);
tmpb->fillWithZero();
const INTERP_KERNEL::CellModel& cm=INTERP_KERNEL::CellModel::GetCellModel((INTERP_KERNEL::NormalizedCellType)conn[*i]);
std::ostringstream oss; oss << "MEDCouplingUMesh::getLevArrPerCellTypes : Cell #" << std::distance(connI,i);
oss << " has a type " << cm.getRepr() << " not in input array of type !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
nbPerType=tmpb.retn();
DataArrayInt *MEDCouplingUMesh::getRenumArrForConsecutiveCellTypesSpec(const INTERP_KERNEL::NormalizedCellType *orderBg, const INTERP_KERNEL::NormalizedCellType *orderEnd) const
{
DataArrayInt *nbPerType=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmpa=getLevArrPerCellTypes(orderBg,orderEnd,nbPerType);
+ MCAuto<DataArrayInt> tmpa=getLevArrPerCellTypes(orderBg,orderEnd,nbPerType);
nbPerType->decrRef();
return tmpa->buildPermArrPerLevel();
}
{
INTERP_KERNEL::NormalizedCellType curType=(INTERP_KERNEL::NormalizedCellType)conn[*i];
int beginCellId=(int)std::distance(connI,i);
- i=std::find_if(i+1,connI+nbOfCells,ParaMEDMEMImpl::ConnReader(conn,(int)curType));
+ i=std::find_if(i+1,connI+nbOfCells,MEDCouplingImpl::ConnReader(conn,(int)curType));
int endCellId=(int)std::distance(connI,i);
int sz=endCellId-beginCellId;
int *cells=new int[sz];
if(_types.size()!=1)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::convertIntoSingleGeoTypeMesh : current mesh does not contain exactly one geometric type !");
INTERP_KERNEL::NormalizedCellType typ=*_types.begin();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1GTUMesh> ret=MEDCoupling1GTUMesh::New(getName(),typ);
+ MCAuto<MEDCoupling1GTUMesh> ret=MEDCoupling1GTUMesh::New(getName(),typ);
ret->setCoords(getCoords());
MEDCoupling1SGTUMesh *retC=dynamic_cast<MEDCoupling1SGTUMesh *>((MEDCoupling1GTUMesh*)ret);
if(retC)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c=convertNodalConnectivityToStaticGeoTypeMesh();
+ MCAuto<DataArrayInt> c=convertNodalConnectivityToStaticGeoTypeMesh();
retC->setNodalConnectivity(c);
}
else
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::convertIntoSingleGeoTypeMesh : Internal error !");
DataArrayInt *c=0,*ci=0;
convertNodalConnectivityToDynamicGeoTypeMesh(c,ci);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cs(c),cis(ci);
+ MCAuto<DataArrayInt> cs(c),cis(ci);
retD->setNodalConnectivity(cs,cis);
}
return ret.retn();
{
std::ostringstream oss; oss << "MEDCouplingUMesh::convertNodalConnectivityToStaticGeoTypeMesh : this contains a single geo type (" << cm.getRepr() << ") but ";
oss << "this type is dynamic ! Only static geometric type is possible for that type ! call convertNodalConnectivityToDynamicGeoTypeMesh instead !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
int nbCells=getNumberOfCells();
int typi=(int)typ;
int nbNodesPerCell=(int)cm.getNumberOfNodes();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> connOut=DataArrayInt::New(); connOut->alloc(nbCells*nbNodesPerCell,1);
+ MCAuto<DataArrayInt> connOut=DataArrayInt::New(); connOut->alloc(nbCells*nbNodesPerCell,1);
int *outPtr=connOut->getPointer();
const int *conn=_nodal_connec->begin();
const int *connI=_nodal_connec_index->begin();
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::convertNodalConnectivityToStaticGeoTypeMesh : there something wrong in cell #" << i << " ! The type of cell is not those expected, or the length of nodal connectivity is not those expected (" << nbNodesPerCell-1 << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
return connOut.retn();
}
+/*!
+ * Convert the nodal connectivity of the mesh so that all the cells are of dynamic types (polygon or quadratic
+ * polygon). This returns the corresponding new nodal connectivity in \ref numbering-indirect format.
+ * \param nodalConn
+ * \param nodalConnI
+ */
void MEDCouplingUMesh::convertNodalConnectivityToDynamicGeoTypeMesh(DataArrayInt *&nodalConn, DataArrayInt *&nodalConnIndex) const
{
- static const char msg0[]="MEDCouplingUMesh::convertNodalConnectivityToDynamicGeoTypeMesh : nodal connectivity in this are invalid ! Call checkCoherency2 !";
+ static const char msg0[]="MEDCouplingUMesh::convertNodalConnectivityToDynamicGeoTypeMesh : nodal connectivity in this are invalid ! Call checkConsistency !";
checkConnectivityFullyDefined();
if(_types.size()!=1)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::convertNodalConnectivityToDynamicGeoTypeMesh : current mesh does not contain exactly one geometric type !");
int nbCells=getNumberOfCells(),lgth=_nodal_connec->getNumberOfTuples();
if(lgth<nbCells)
throw INTERP_KERNEL::Exception(msg0);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c(DataArrayInt::New()),ci(DataArrayInt::New());
+ MCAuto<DataArrayInt> c(DataArrayInt::New()),ci(DataArrayInt::New());
c->alloc(lgth-nbCells,1); ci->alloc(nbCells+1,1);
int *cp(c->getPointer()),*cip(ci->getPointer());
const int *incp(_nodal_connec->begin()),*incip(_nodal_connec_index->begin());
const DataArrayDouble *refCoo=ms2[0]->getCoords();
int meshDim=ms2[0]->getMeshDimension();
std::vector<const MEDCouplingUMesh *> m1ssm;
- std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> > m1ssmAuto;
+ std::vector< MCAuto<MEDCouplingUMesh> > m1ssmAuto;
//
std::vector<const MEDCouplingUMesh *> m1ssmSingle;
- std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> > m1ssmSingleAuto;
+ std::vector< MCAuto<MEDCouplingUMesh> > m1ssmSingleAuto;
int fake=0,rk=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret1(DataArrayInt::New()),ret2(DataArrayInt::New());
+ MCAuto<DataArrayInt> ret1(DataArrayInt::New()),ret2(DataArrayInt::New());
ret1->alloc(0,1); ret2->alloc(0,1);
for(std::vector<const MEDCouplingUMesh *>::const_iterator it=ms2.begin();it!=ms2.end();it++,rk++)
{
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::AggregateSortedByTypeMeshesOnSameCoords : meshes are not shared by a single coordinates coords !");
std::vector<MEDCouplingUMesh *> sp=(*it)->splitByType();
std::copy(sp.begin(),sp.end(),std::back_insert_iterator< std::vector<const MEDCouplingUMesh *> >(m1ssm));
- std::copy(sp.begin(),sp.end(),std::back_insert_iterator< std::vector<MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> > >(m1ssmAuto));
+ std::copy(sp.begin(),sp.end(),std::back_insert_iterator< std::vector<MCAuto<MEDCouplingUMesh> > >(m1ssmAuto));
for(std::vector<MEDCouplingUMesh *>::const_iterator it2=sp.begin();it2!=sp.end();it2++)
{
MEDCouplingUMesh *singleCell=static_cast<MEDCouplingUMesh *>((*it2)->buildPartOfMySelf(&fake,&fake+1,true));
ret1->pushBackSilent((*it2)->getNumberOfCells()); ret2->pushBackSilent(rk);
}
}
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m1ssmSingle2=MEDCouplingUMesh::MergeUMeshesOnSameCoords(m1ssmSingle);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> renum=m1ssmSingle2->sortCellsInMEDFileFrmt();
+ MCAuto<MEDCouplingUMesh> m1ssmSingle2=MEDCouplingUMesh::MergeUMeshesOnSameCoords(m1ssmSingle);
+ MCAuto<DataArrayInt> renum=m1ssmSingle2->sortCellsInMEDFileFrmt();
std::vector<const MEDCouplingUMesh *> m1ssmfinal(m1ssm.size());
for(std::size_t i=0;i<m1ssm.size();i++)
m1ssmfinal[renum->getIJ(i,0)]=m1ssm[i];
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret0=MEDCouplingUMesh::MergeUMeshesOnSameCoords(m1ssmfinal);
+ MCAuto<MEDCouplingUMesh> ret0=MEDCouplingUMesh::MergeUMeshesOnSameCoords(m1ssmfinal);
szOfCellGrpOfSameType=ret1->renumber(renum->getConstPointer());
idInMsOfCellGrpOfSameType=ret2->renumber(renum->getConstPointer());
return ret0.retn();
checkFullyDefined();
const int *conn=_nodal_connec->getConstPointer();
const int *connIndex=_nodal_connec_index->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(0,1);
+ MCAuto<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(0,1);
for(const int *w=begin;w!=end;w++)
if((INTERP_KERNEL::NormalizedCellType)conn[connIndex[*w]]==type)
ret->pushBackSilent(*w);
{
std::ostringstream oss; oss << "MEDCouplingUMesh::keepSpecifiedCells : Request on type " << type << " at place #" << std::distance(idsPerGeoTypeBg,work) << " value " << *work;
oss << ". It should be in [0," << szOfType << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> idsTokeep=DataArrayInt::New(); idsTokeep->alloc(sz+(int)std::distance(idsPerGeoTypeBg,idsPerGeoTypeEnd),1);
+ MCAuto<DataArrayInt> idsTokeep=DataArrayInt::New(); idsTokeep->alloc(sz+(int)std::distance(idsPerGeoTypeBg,idsPerGeoTypeEnd),1);
int *idsPtr=idsTokeep->getPointer();
int offset=0;
for(std::size_t i=0;i<nOfTypesInThis;i++)
idsPtr=std::transform(idsPerGeoTypeBg,idsPerGeoTypeEnd,idsPtr,std::bind2nd(std::plus<int>(),offset));
offset+=code[3*i+1];
}
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=static_cast<MEDCouplingUMesh *>(buildPartOfMySelf(idsTokeep->begin(),idsTokeep->end(),true));
+ MCAuto<MEDCouplingUMesh> ret=static_cast<MEDCouplingUMesh *>(buildPartOfMySelf(idsTokeep->begin(),idsTokeep->end(),true));
ret->copyTinyInfoFrom(this);
return ret.retn();
}
* \throw If the nodal connectivity of cells is not defined.
* \sa MEDCouplingUMesh::computeIsoBarycenterOfNodesPerCell
*/
-DataArrayDouble *MEDCouplingUMesh::getBarycenterAndOwner() const
+DataArrayDouble *MEDCouplingUMesh::computeCellCenterOfMass() const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> ret=DataArrayDouble::New();
int spaceDim=getSpaceDimension();
int nbOfCells=getNumberOfCells();
ret->alloc(nbOfCells,spaceDim);
/*!
* This method computes for each cell in \a this, the location of the iso barycenter of nodes constituting
- * the cell. Contrary to badly named MEDCouplingUMesh::getBarycenterAndOwner method that returns the center of inertia of the
+ * the cell. Contrary to badly named MEDCouplingUMesh::computeCellCenterOfMass method that returns the center of inertia of the
*
* \return a newly allocated DataArrayDouble instance that the caller has to deal with. The returned
* DataArrayDouble instance will have \c this->getNumberOfCells() tuples and \c this->getSpaceDimension() components.
*
- * \sa MEDCouplingUMesh::getBarycenterAndOwner
+ * \sa MEDCouplingUMesh::computeCellCenterOfMass
* \throw If \a this is not fully defined (coordinates and connectivity)
* \throw If there is presence in nodal connectivity in \a this of node ids not in [0, \c this->getNumberOfNodes() )
*/
DataArrayDouble *MEDCouplingUMesh::computeIsoBarycenterOfNodesPerCell() const
{
checkFullyDefined();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> ret=DataArrayDouble::New();
int spaceDim=getSpaceDimension();
int nbOfCells=getNumberOfCells();
int nbOfNodes=getNumberOfNodes();
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::computeIsoBarycenterOfNodesPerCell : on cell #" << i << " presence of nodeId #" << *conn << " should be in [0," << nbOfNodes << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
int nbOfNodesInCell=nodalI[i+1]-nodalI[i]-1;
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::computeIsoBarycenterOfNodesPerCell : on cell #" << i << " presence of cell with no nodes !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
else
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::computeIsoBarycenterOfNodesPerCell : on cell polyhedron cell #" << i << " presence of nodeId #" << *it << " should be in [0," << nbOfNodes << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
if(!s.empty())
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::computeIsoBarycenterOfNodesPerCell : on polyhedron cell #" << i << " there are no nodes !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
}
*/
DataArrayDouble *MEDCouplingUMesh::computePlaneEquationOf3DFaces() const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret(DataArrayDouble::New());
+ MCAuto<DataArrayDouble> ret(DataArrayDouble::New());
int nbOfCells(getNumberOfCells()),nbOfNodes(getNumberOfNodes());
if(getSpaceDimension()!=3 || getMeshDimension()!=2)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::computePlaneEquationOf3DFaces : This method must be applied on a mesh having meshDimension equal 2 and a spaceDimension equal to 3 !");
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::computePlaneEquationOf3DFaces : invalid 2D cell #" << i << " ! This cell points to an invalid nodeId : " << nodeId << " !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
}
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::computePlaneEquationOf3DFaces : invalid 2D cell #" << i << " ! Must be constitued by more than 3 nodes !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
INTERP_KERNEL::inverseMatrix(matrix,4,matrix2);
retPtr[0]=matrix2[3]; retPtr[1]=matrix2[7]; retPtr[2]=matrix2[11]; retPtr[3]=matrix2[15];
if(!da)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::Build0DMeshFromCoords : instance of DataArrayDouble must be not null !");
da->checkAllocated();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(da->getName(),0);
+ MCAuto<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(da->getName(),0);
ret->setCoords(da);
int nbOfTuples=da->getNumberOfTuples();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cI=DataArrayInt::New();
+ MCAuto<DataArrayInt> c=DataArrayInt::New();
+ MCAuto<DataArrayInt> cI=DataArrayInt::New();
c->alloc(2*nbOfTuples,1);
cI->alloc(nbOfTuples+1,1);
int *cp=c->getPointer();
if(!a[ii])
{
std::ostringstream oss; oss << "MEDCouplingUMesh::MergeUMeshes : item #" << ii << " in input array of size "<< sz << " is empty !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
- std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> > bb(sz);
+ std::vector< MCAuto<MEDCouplingUMesh> > bb(sz);
std::vector< const MEDCouplingUMesh * > aa(sz);
int spaceDim=-3;
for(std::size_t i=0;i<sz && spaceDim==-3;i++)
std::vector<const MEDCouplingUMesh *>::const_iterator it=a.begin();
int meshDim=(*it)->getMeshDimension();
int nbOfCells=(*it)->getNumberOfCells();
- int meshLgth=(*it++)->getMeshLength();
+ int meshLgth=(*it++)->getNodalConnectivityArrayLen();
for(;it!=a.end();it++)
{
if(meshDim!=(*it)->getMeshDimension())
throw INTERP_KERNEL::Exception("Mesh dimensions mismatches, MergeUMeshes impossible !");
nbOfCells+=(*it)->getNumberOfCells();
- meshLgth+=(*it)->getMeshLength();
+ meshLgth+=(*it)->getNodalConnectivityArrayLen();
}
std::vector<const MEDCouplingPointSet *> aps(a.size());
std::copy(a.begin(),a.end(),aps.begin());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> pts=MergeNodesArray(aps);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New("merge",meshDim);
+ MCAuto<DataArrayDouble> pts=MergeNodesArray(aps);
+ MCAuto<MEDCouplingUMesh> ret=MEDCouplingUMesh::New("merge",meshDim);
ret->setCoords(pts);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c=DataArrayInt::New();
+ MCAuto<DataArrayInt> c=DataArrayInt::New();
c->alloc(meshLgth,1);
int *cPtr=c->getPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cI=DataArrayInt::New();
+ MCAuto<DataArrayInt> cI=DataArrayInt::New();
cI->alloc(nbOfCells+1,1);
int *cIPtr=cI->getPointer();
*cIPtr++=0;
* dimension and sharing the node coordinates array.
* All cells of the *i*-th mesh precede all cells of the
* (*i*+1)-th mesh within the result mesh.
- * \param [in] a - a vector of meshes (MEDCouplingUMesh) to concatenate.
+ * \param [in] meshes - a vector of meshes (MEDCouplingUMesh) to concatenate.
* \return MEDCouplingUMesh * - the result mesh. It is a new instance of
* MEDCouplingUMesh. The caller is to delete this mesh using decrRef() as it
* is no more needed.
if(!meshes[ii])
{
std::ostringstream oss; oss << "MEDCouplingUMesh::MergeUMeshesOnSameCoords : item #" << ii << " in input array of size "<< meshes.size() << " is empty !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
const DataArrayDouble *coords=meshes.front()->getCoords();
int meshDim=meshes.front()->getMeshDimension();
throw INTERP_KERNEL::Exception("meshes does not share the same coords ! Try using tryToShareSameCoords method !");
if(meshDim!=(*iter)->getMeshDimension())
throw INTERP_KERNEL::Exception("Mesh dimensions mismatches, FuseUMeshesOnSameCoords impossible !");
- meshLgth+=(*iter)->getMeshLength();
+ meshLgth+=(*iter)->getNodalConnectivityArrayLen();
meshIndexLgth+=(*iter)->getNumberOfCells();
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> nodal=DataArrayInt::New();
+ MCAuto<DataArrayInt> nodal=DataArrayInt::New();
nodal->alloc(meshLgth,1);
int *nodalPtr=nodal->getPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> nodalIndex=DataArrayInt::New();
+ MCAuto<DataArrayInt> nodalIndex=DataArrayInt::New();
nodalIndex->alloc(meshIndexLgth+1,1);
int *nodalIndexPtr=nodalIndex->getPointer();
int offset=0;
const int *nod=(*iter)->getNodalConnectivity()->getConstPointer();
const int *index=(*iter)->getNodalConnectivityIndex()->getConstPointer();
int nbOfCells=(*iter)->getNumberOfCells();
- int meshLgth2=(*iter)->getMeshLength();
+ int meshLgth2=(*iter)->getNodalConnectivityArrayLen();
nodalPtr=std::copy(nod,nod+meshLgth2,nodalPtr);
if(iter!=meshes.begin())
nodalIndexPtr=std::transform(index+1,index+nbOfCells+1,nodalIndexPtr,std::bind2nd(std::plus<int>(),offset));
MEDCouplingUMesh *MEDCouplingUMesh::FuseUMeshesOnSameCoords(const std::vector<const MEDCouplingUMesh *>& meshes, int compType, std::vector<DataArrayInt *>& corr)
{
//All checks are delegated to MergeUMeshesOnSameCoords
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MergeUMeshesOnSameCoords(meshes);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> o2n=ret->zipConnectivityTraducer(compType);
+ MCAuto<MEDCouplingUMesh> ret=MergeUMeshesOnSameCoords(meshes);
+ MCAuto<DataArrayInt> o2n=ret->zipConnectivityTraducer(compType);
corr.resize(meshes.size());
std::size_t nbOfMeshes=meshes.size();
int offset=0;
* array is created by concatenating the connectivity arrays of all given meshes. All
* the given meshes must be of the same space dimension but dimension of cells **can
* differ**. This method is particulary useful in MEDLoader context to build a \ref
- * ParaMEDMEM::MEDFileUMesh "MEDFileUMesh" instance that expects that underlying
+ * MEDCoupling::MEDFileUMesh "MEDFileUMesh" instance that expects that underlying
* MEDCouplingUMesh'es of different dimension share the same nodal connectivity array.
* \param [in,out] meshes - a vector of meshes to update.
* \throw If any of \a meshes is NULL.
{
std::ostringstream oss; oss << " MEDCouplingUMesh::PutUMeshesOnSameAggregatedCoords : Item #" << std::distance(meshes.begin(),it) << " inside the vector of length " << meshes.size();
oss << " has no coordinate array defined !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
else
{
std::ostringstream oss; oss << " MEDCouplingUMesh::PutUMeshesOnSameAggregatedCoords : Item #" << std::distance(meshes.begin(),it) << " inside the vector of length " << meshes.size();
oss << " is null !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> res=DataArrayDouble::Aggregate(coords);
+ MCAuto<DataArrayDouble> res=DataArrayDouble::Aggregate(coords);
std::vector<MEDCouplingUMesh *>::const_iterator it=meshes.begin();
int offset=(*it)->getNumberOfNodes();
(*it++)->setCoords(res);
* Merges nodes coincident with a given precision within all given meshes that share
* the nodal connectivity array. The given meshes **can be of different** mesh
* dimension. This method is particulary useful in MEDLoader context to build a \ref
- * ParaMEDMEM::MEDFileUMesh "MEDFileUMesh" instance that expects that underlying
+ * MEDCoupling::MEDFileUMesh "MEDFileUMesh" instance that expects that underlying
* MEDCouplingUMesh'es of different dimension share the same nodal connectivity array.
* \param [in,out] meshes - a vector of meshes to update.
* \param [in] eps - the precision used to detect coincident nodes (infinite norm).
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::MergeNodesOnUMeshesSharingSameCoords : In input vector of unstructured meshes of size " << meshes.size() << " the element #" << std::distance(meshes.begin(),it) << " is null !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
if(s.size()!=1)
{
std::ostringstream oss; oss << "MEDCouplingUMesh::MergeNodesOnUMeshesSharingSameCoords : In input vector of unstructured meshes of size " << meshes.size() << ", it appears that they do not share the same instance of DataArrayDouble for coordiantes ! tryToShareSameCoordsPermute method can help to reach that !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
const DataArrayDouble *coo=*(s.begin());
if(!coo)
//
DataArrayInt *comm,*commI;
coo->findCommonTuples(eps,-1,comm,commI);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp1(comm),tmp2(commI);
+ MCAuto<DataArrayInt> tmp1(comm),tmp2(commI);
int oldNbOfNodes=coo->getNumberOfTuples();
int newNbOfNodes;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> o2n=DataArrayInt::BuildOld2NewArrayFromSurjectiveFormat2(oldNbOfNodes,comm->begin(),commI->begin(),commI->end(),newNbOfNodes);
+ MCAuto<DataArrayInt> o2n=DataArrayInt::ConvertIndexArrayToO2N(oldNbOfNodes,comm->begin(),commI->begin(),commI->end(),newNbOfNodes);
if(oldNbOfNodes==newNbOfNodes)
return ;
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> newCoords=coo->renumberAndReduce(o2n->getConstPointer(),newNbOfNodes);
+ MCAuto<DataArrayDouble> newCoords=coo->renumberAndReduce(o2n->getConstPointer(),newNbOfNodes);
for(std::vector<MEDCouplingUMesh *>::const_iterator it=meshes.begin();it!=meshes.end();it++)
{
(*it)->renumberNodesInConn(o2n->getConstPointer());
{
std::size_t sz=std::distance(begin,end);
if(sz!=4)
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::IsTetra4WellOriented : Tetra4 cell with not 4 nodes ! Call checkCoherency2 !");
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::IsTetra4WellOriented : Tetra4 cell with not 4 nodes ! Call checkConsistency !");
double vec0[3],vec1[3];
const double *pt0=coords+3*begin[0],*pt1=coords+3*begin[1],*pt2=coords+3*begin[2],*pt3=coords+3*begin[3];
vec0[0]=pt1[0]-pt0[0]; vec0[1]=pt1[1]-pt0[1]; vec0[2]=pt1[2]-pt0[2]; vec1[0]=pt2[0]-pt0[0]; vec1[1]=pt2[1]-pt0[1]; vec1[2]=pt2[2]-pt0[2];
{
std::size_t sz=std::distance(begin,end);
if(sz!=5)
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::IsPyra5WellOriented : Pyra5 cell with not 5 nodes ! Call checkCoherency2 !");
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::IsPyra5WellOriented : Pyra5 cell with not 5 nodes ! Call checkConsistency !");
double vec0[3];
INTERP_KERNEL::areaVectorOfPolygon<int,INTERP_KERNEL::ALL_C_MODE>(begin,4,coords,vec0);
const double *pt0=coords+3*begin[0],*pt1=coords+3*begin[4];
void MEDCouplingUMesh::SimplifyPolyhedronCell(double eps, const DataArrayDouble *coords, const int *begin, const int *end, DataArrayInt *res)
{
int nbFaces=std::count(begin+1,end,-1)+1;
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> v=DataArrayDouble::New(); v->alloc(nbFaces,3);
+ MCAuto<DataArrayDouble> v=DataArrayDouble::New(); v->alloc(nbFaces,3);
double *vPtr=v->getPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> p=DataArrayDouble::New(); p->alloc(nbFaces,1);
+ MCAuto<DataArrayDouble> p=DataArrayDouble::New(); p->alloc(nbFaces,1);
double *pPtr=p->getPointer();
const int *stFaceConn=begin+1;
for(int i=0;i<nbFaces;i++,vPtr+=3,pPtr++)
pPtr=p->getPointer(); vPtr=v->getPointer();
DataArrayInt *comm1=0,*commI1=0;
v->findCommonTuples(eps,-1,comm1,commI1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> comm1Auto(comm1),commI1Auto(commI1);
+ MCAuto<DataArrayInt> comm1Auto(comm1),commI1Auto(commI1);
const int *comm1Ptr=comm1->getConstPointer();
const int *commI1Ptr=commI1->getConstPointer();
int nbOfGrps1=commI1Auto->getNumberOfTuples()-1;
res->pushBackSilent((int)INTERP_KERNEL::NORM_POLYHED);
//
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mm=MEDCouplingUMesh::New("",3);
+ MCAuto<MEDCouplingUMesh> mm=MEDCouplingUMesh::New("",3);
mm->setCoords(const_cast<DataArrayDouble *>(coords)); mm->allocateCells(1); mm->insertNextCell(INTERP_KERNEL::NORM_POLYHED,(int)std::distance(begin+1,end),begin+1);
mm->finishInsertingCells();
//
for(int i=0;i<nbOfGrps1;i++)
{
int vecId=comm1Ptr[commI1Ptr[i]];
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> tmpgrp2=p->selectByTupleId(comm1Ptr+commI1Ptr[i],comm1Ptr+commI1Ptr[i+1]);
+ MCAuto<DataArrayDouble> tmpgrp2=p->selectByTupleId(comm1Ptr+commI1Ptr[i],comm1Ptr+commI1Ptr[i+1]);
DataArrayInt *comm2=0,*commI2=0;
tmpgrp2->findCommonTuples(eps,-1,comm2,commI2);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> comm2Auto(comm2),commI2Auto(commI2);
+ MCAuto<DataArrayInt> comm2Auto(comm2),commI2Auto(commI2);
const int *comm2Ptr=comm2->getConstPointer();
const int *commI2Ptr=commI2->getConstPointer();
int nbOfGrps2=commI2Auto->getNumberOfTuples()-1;
else
{
int pointId=comm1Ptr[commI1Ptr[i]+comm2Ptr[commI2Ptr[j]]];
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ids2=comm2->selectByTupleId2(commI2Ptr[j],commI2Ptr[j+1],1);
+ MCAuto<DataArrayInt> ids2=comm2->selectByTupleIdSafeSlice(commI2Ptr[j],commI2Ptr[j+1],1);
ids2->transformWithIndArr(comm1Ptr+commI1Ptr[i],comm1Ptr+commI1Ptr[i+1]);
DataArrayInt *tmp0=DataArrayInt::New(),*tmp1=DataArrayInt::New(),*tmp2=DataArrayInt::New(),*tmp3=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mm2=mm->buildDescendingConnectivity(tmp0,tmp1,tmp2,tmp3); tmp0->decrRef(); tmp1->decrRef(); tmp2->decrRef(); tmp3->decrRef();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mm3=static_cast<MEDCouplingUMesh *>(mm2->buildPartOfMySelf(ids2->begin(),ids2->end(),true));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> idsNodeTmp=mm3->zipCoordsTraducer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> idsNode=idsNodeTmp->invertArrayO2N2N2O(mm3->getNumberOfNodes());
+ MCAuto<MEDCouplingUMesh> mm2=mm->buildDescendingConnectivity(tmp0,tmp1,tmp2,tmp3); tmp0->decrRef(); tmp1->decrRef(); tmp2->decrRef(); tmp3->decrRef();
+ MCAuto<MEDCouplingUMesh> mm3=static_cast<MEDCouplingUMesh *>(mm2->buildPartOfMySelf(ids2->begin(),ids2->end(),true));
+ MCAuto<DataArrayInt> idsNodeTmp=mm3->zipCoordsTraducer();
+ MCAuto<DataArrayInt> idsNode=idsNodeTmp->invertArrayO2N2N2O(mm3->getNumberOfNodes());
const int *idsNodePtr=idsNode->getConstPointer();
double center[3]; center[0]=pPtr[pointId]*vPtr[3*vecId]; center[1]=pPtr[pointId]*vPtr[3*vecId+1]; center[2]=pPtr[pointId]*vPtr[3*vecId+2];
double vec[3]; vec[0]=vPtr[3*vecId+1]; vec[1]=-vPtr[3*vecId]; vec[2]=0.;
mm3->rotate(center,vec,angle);
}
mm3->changeSpaceDimension(2);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mm4=mm3->buildSpreadZonesWithPoly();
+ MCAuto<MEDCouplingUMesh> mm4=mm3->buildSpreadZonesWithPoly();
const int *conn4=mm4->getNodalConnectivity()->getConstPointer();
const int *connI4=mm4->getNodalConnectivityIndex()->getConstPointer();
int nbOfCells=mm4->getNumberOfCells();
std::pair<int,int> p1(bgFace[j],bgFace[(j+1)%nbOfEdgesInFace]);
std::pair<int,int> p2(p1.second,p1.first);
if(std::find(edgesOK.begin(),edgesOK.end(),p1)!=edgesOK.end())
- { std::ostringstream oss; oss << "Face #" << j << " of polyhedron looks bad !"; throw INTERP_KERNEL::Exception(oss.str().c_str()); }
+ { std::ostringstream oss; oss << "Face #" << j << " of polyhedron looks bad !"; throw INTERP_KERNEL::Exception(oss.str()); }
if(std::find(edgesFinished.begin(),edgesFinished.end(),p1)!=edgesFinished.end() || std::find(edgesFinished.begin(),edgesFinished.end(),p2)!=edgesFinished.end())
- { std::ostringstream oss; oss << "Face #" << j << " of polyhedron looks bad !"; throw INTERP_KERNEL::Exception(oss.str().c_str()); }
+ { std::ostringstream oss; oss << "Face #" << j << " of polyhedron looks bad !"; throw INTERP_KERNEL::Exception(oss.str()); }
std::list< std::pair<int,int> >::iterator it=std::find(edgesOK.begin(),edgesOK.end(),p2);
if(it!=edgesOK.end())
{
{
int nbOfNodesExpected(skin->getNumberOfNodes());
const int *n2oPtr(n2o->getConstPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revNodal(DataArrayInt::New()),revNodalI(DataArrayInt::New());
+ MCAuto<DataArrayInt> revNodal(DataArrayInt::New()),revNodalI(DataArrayInt::New());
skin->getReverseNodalConnectivity(revNodal,revNodalI);
const int *revNodalPtr(revNodal->getConstPointer()),*revNodalIPtr(revNodalI->getConstPointer());
const int *nodalPtr(skin->getNodalConnectivity()->getConstPointer());
const int *nodalIPtr(skin->getNodalConnectivityIndex()->getConstPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(nbOfNodesExpected+1,1);
+ MCAuto<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(nbOfNodesExpected+1,1);
int *work(ret->getPointer()); *work++=INTERP_KERNEL::NORM_POLYGON;
if(nbOfNodesExpected<1)
return ret.retn();
int nbOfNodesExpected(skin->getNumberOfNodes());
int nbOfTurn(nbOfNodesExpected/2);
const int *n2oPtr(n2o->getConstPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revNodal(DataArrayInt::New()),revNodalI(DataArrayInt::New());
+ MCAuto<DataArrayInt> revNodal(DataArrayInt::New()),revNodalI(DataArrayInt::New());
skin->getReverseNodalConnectivity(revNodal,revNodalI);
const int *revNodalPtr(revNodal->getConstPointer()),*revNodalIPtr(revNodalI->getConstPointer());
const int *nodalPtr(skin->getNodalConnectivity()->getConstPointer());
const int *nodalIPtr(skin->getNodalConnectivityIndex()->getConstPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(nbOfNodesExpected+1,1);
+ MCAuto<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(nbOfNodesExpected+1,1);
int *work(ret->getPointer()); *work++=INTERP_KERNEL::NORM_QPOLYG;
if(nbOfNodesExpected<1)
return ret.retn();
{
if(getMeshDimension()!=2 || getSpaceDimension()!=2)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::buildUnionOf2DMesh : meshdimension, spacedimension must be equal to 2 !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> skin(computeSkin());
+ MCAuto<MEDCouplingUMesh> skin(computeSkin());
int oldNbOfNodes(skin->getNumberOfNodes());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> o2n(skin->zipCoordsTraducer());
+ MCAuto<DataArrayInt> o2n(skin->zipCoordsTraducer());
int nbOfNodesExpected(skin->getNumberOfNodes());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> n2o(o2n->invertArrayO2N2N2O(oldNbOfNodes));
+ MCAuto<DataArrayInt> n2o(o2n->invertArrayO2N2N2O(oldNbOfNodes));
int nbCells(skin->getNumberOfCells());
if(nbCells==nbOfNodesExpected)
return buildUnionOf2DMeshLinear(skin,n2o);
{
if(getMeshDimension()!=3 || getSpaceDimension()!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::buildUnionOf3DMesh : meshdimension, spacedimension must be equal to 2 !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=computeSkin();
+ MCAuto<MEDCouplingUMesh> m=computeSkin();
const int *conn=m->getNodalConnectivity()->getConstPointer();
const int *connI=m->getNodalConnectivityIndex()->getConstPointer();
int nbOfCells=m->getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(m->getNodalConnectivity()->getNumberOfTuples(),1);
+ MCAuto<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(m->getNodalConnectivity()->getNumberOfTuples(),1);
int *work=ret->getPointer(); *work++=INTERP_KERNEL::NORM_POLYHED;
if(nbOfCells<1)
return ret.retn();
return ret.retn();
}
+/*!
+ * \brief Creates a graph of cell neighbors
+ * \return MEDCouplingSkyLineArray * - an sky line array the user should delete.
+ * In the sky line array, graph arcs are stored in terms of (index,value) notation.
+ * For example
+ * - index: 0 3 5 6 6
+ * - value: 1 2 3 2 3 3
+ * means 6 arcs (0,1), (0,2), (0,3), (1,2), (1,3), (2,3)
+ * Arcs are not doubled but reflexive (1,1) arcs are present for each cell
+ */
+MEDCouplingSkyLineArray *MEDCouplingUMesh::generateGraph() const
+{
+ checkConnectivityFullyDefined();
+
+ int meshDim = this->getMeshDimension();
+ MEDCoupling::DataArrayInt* indexr=MEDCoupling::DataArrayInt::New();
+ MEDCoupling::DataArrayInt* revConn=MEDCoupling::DataArrayInt::New();
+ this->getReverseNodalConnectivity(revConn,indexr);
+ const int* indexr_ptr=indexr->getConstPointer();
+ const int* revConn_ptr=revConn->getConstPointer();
+
+ const MEDCoupling::DataArrayInt* index;
+ const MEDCoupling::DataArrayInt* conn;
+ conn=this->getNodalConnectivity(); // it includes a type as the 1st element!!!
+ index=this->getNodalConnectivityIndex();
+ int nbCells=this->getNumberOfCells();
+ const int* index_ptr=index->getConstPointer();
+ const int* conn_ptr=conn->getConstPointer();
+
+ //creating graph arcs (cell to cell relations)
+ //arcs are stored in terms of (index,value) notation
+ // 0 3 5 6 6
+ // 1 2 3 2 3 3
+ // means 6 arcs (0,1), (0,2), (0,3), (1,2), (1,3), (2,3)
+ // in present version arcs are not doubled but reflexive (1,1) arcs are present for each cell
+
+ //warning here one node have less than or equal effective number of cell with it
+ //but cell could have more than effective nodes
+ //because other equals nodes in other domain (with other global inode)
+ std::vector <int> cell2cell_index(nbCells+1,0);
+ std::vector <int> cell2cell;
+ cell2cell.reserve(3*nbCells);
+
+ for (int icell=0; icell<nbCells;icell++)
+ {
+ std::map<int,int > counter;
+ for (int iconn=index_ptr[icell]+1; iconn<index_ptr[icell+1];iconn++)
+ {
+ int inode=conn_ptr[iconn];
+ for (int iconnr=indexr_ptr[inode]; iconnr<indexr_ptr[inode+1];iconnr++)
+ {
+ int icell2=revConn_ptr[iconnr];
+ std::map<int,int>::iterator iter=counter.find(icell2);
+ if (iter!=counter.end()) (iter->second)++;
+ else counter.insert(std::make_pair(icell2,1));
+ }
+ }
+ for (std::map<int,int>::const_iterator iter=counter.begin();
+ iter!=counter.end(); iter++)
+ if (iter->second >= meshDim)
+ {
+ cell2cell_index[icell+1]++;
+ cell2cell.push_back(iter->first);
+ }
+ }
+ indexr->decrRef();
+ revConn->decrRef();
+ cell2cell_index[0]=0;
+ for (int icell=0; icell<nbCells;icell++)
+ cell2cell_index[icell+1]=cell2cell_index[icell]+cell2cell_index[icell+1];
+
+ //filling up index and value to create skylinearray structure
+ MEDCouplingSkyLineArray* array=new MEDCouplingSkyLineArray(cell2cell_index,cell2cell);
+ return array;
+}
+
/*!
* This method put in zip format into parameter 'zipFrmt' in full interlace mode.
* This format is often asked by INTERP_KERNEL algorithms to avoid many indirections into coordinates array.
int nbOfCells=getNumberOfCells();
if(nbOfCells<=0)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::writeVTK : the unstructured mesh has no cells !");
- static const int PARAMEDMEM2VTKTYPETRADUCER[INTERP_KERNEL::NORM_MAXTYPE+1]={1,3,21,5,9,7,22,34,23,28,-1,-1,-1,-1,10,14,13,-1,12,-1,24,-1,16,27,-1,26,-1,29,-1,-1,25,42,36,4};
ofs << " <" << getVTKDataSetType() << ">\n";
ofs << " <Piece NumberOfPoints=\"" << getNumberOfNodes() << "\" NumberOfCells=\"" << nbOfCells << "\">\n";
ofs << " <PointData>\n" << pointData << std::endl;
_coords->writeVTK(ofs,8,"Points",byteData);
else
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coo=_coords->changeNbOfComponents(3,0.);
+ MCAuto<DataArrayDouble> coo=_coords->changeNbOfComponents(3,0.);
coo->writeVTK(ofs,8,"Points",byteData);
}
ofs << " </Points>\n";
ofs << " <Cells>\n";
const int *cPtr=_nodal_connec->getConstPointer();
const int *cIPtr=_nodal_connec_index->getConstPointer();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> faceoffsets=DataArrayInt::New(); faceoffsets->alloc(nbOfCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> types=DataArrayInt::New(); types->alloc(nbOfCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> offsets=DataArrayInt::New(); offsets->alloc(nbOfCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> connectivity=DataArrayInt::New(); connectivity->alloc(_nodal_connec->getNumberOfTuples()-nbOfCells,1);
+ MCAuto<DataArrayInt> faceoffsets=DataArrayInt::New(); faceoffsets->alloc(nbOfCells,1);
+ MCAuto<DataArrayInt> types=DataArrayInt::New(); types->alloc(nbOfCells,1);
+ MCAuto<DataArrayInt> offsets=DataArrayInt::New(); offsets->alloc(nbOfCells,1);
+ MCAuto<DataArrayInt> connectivity=DataArrayInt::New(); connectivity->alloc(_nodal_connec->getNumberOfTuples()-nbOfCells,1);
int *w1=faceoffsets->getPointer(),*w2=types->getPointer(),*w3=offsets->getPointer(),*w4=connectivity->getPointer();
int szFaceOffsets=0,szConn=0;
for(int i=0;i<nbOfCells;i++,w1++,w2++,w3++)
w4=std::copy(c.begin(),c.end(),w4);
}
}
- types->transformWithIndArr(PARAMEDMEM2VTKTYPETRADUCER,PARAMEDMEM2VTKTYPETRADUCER+INTERP_KERNEL::NORM_MAXTYPE+1);
+ types->transformWithIndArr(MEDCOUPLING2VTKTYPETRADUCER,MEDCOUPLING2VTKTYPETRADUCER+INTERP_KERNEL::NORM_MAXTYPE+1);
types->writeVTK(ofs,8,"UInt8","types",byteData);
offsets->writeVTK(ofs,8,"Int32","offsets",byteData);
if(szFaceOffsets!=0)
{//presence of Polyhedra
connectivity->reAlloc(szConn);
faceoffsets->writeVTK(ofs,8,"Int32","faceoffsets",byteData);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> faces=DataArrayInt::New(); faces->alloc(szFaceOffsets,1);
+ MCAuto<DataArrayInt> faces=DataArrayInt::New(); faces->alloc(szFaceOffsets,1);
w1=faces->getPointer();
for(int i=0;i<nbOfCells;i++)
if((INTERP_KERNEL::NormalizedCellType)cPtr[cIPtr[i]]==INTERP_KERNEL::NORM_POLYHED)
m1Desc,desc1,descIndx1,revDesc1,revDescIndx1,
addCoo, m2Desc,desc2,descIndx2,revDesc2,revDescIndx2);
revDesc1->decrRef(); revDescIndx1->decrRef(); revDesc2->decrRef(); revDescIndx2->decrRef();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> dd1(desc1),dd2(descIndx1),dd3(desc2),dd4(descIndx2);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> dd5(m1Desc),dd6(m2Desc);
+ MCAuto<DataArrayInt> dd1(desc1),dd2(descIndx1),dd3(desc2),dd4(descIndx2);
+ MCAuto<MEDCouplingUMesh> dd5(m1Desc),dd6(m2Desc);
// Step 2: re-order newly created nodes according to the ordering found in m2
std::vector< std::vector<int> > intersectEdge2;
/* outputs -> */addCoordsQuadratic,cr,crI,cNb1,cNb2);
// Step 4: Prepare final result:
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> addCooDa(DataArrayDouble::New());
+ MCAuto<DataArrayDouble> addCooDa(DataArrayDouble::New());
addCooDa->alloc((int)(addCoo.size())/2,2);
std::copy(addCoo.begin(),addCoo.end(),addCooDa->getPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> addCoordsQuadraticDa(DataArrayDouble::New());
+ MCAuto<DataArrayDouble> addCoordsQuadraticDa(DataArrayDouble::New());
addCoordsQuadraticDa->alloc((int)(addCoordsQuadratic.size())/2,2);
std::copy(addCoordsQuadratic.begin(),addCoordsQuadratic.end(),addCoordsQuadraticDa->getPointer());
std::vector<const DataArrayDouble *> coordss(4);
coordss[0]=m1->getCoords(); coordss[1]=m2->getCoords(); coordss[2]=addCooDa; coordss[3]=addCoordsQuadraticDa;
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coo(DataArrayDouble::Aggregate(coordss));
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret(MEDCouplingUMesh::New("Intersect2D",2));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn(DataArrayInt::New()); conn->alloc((int)cr.size(),1); std::copy(cr.begin(),cr.end(),conn->getPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> connI(DataArrayInt::New()); connI->alloc((int)crI.size(),1); std::copy(crI.begin(),crI.end(),connI->getPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c1(DataArrayInt::New()); c1->alloc((int)cNb1.size(),1); std::copy(cNb1.begin(),cNb1.end(),c1->getPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c2(DataArrayInt::New()); c2->alloc((int)cNb2.size(),1); std::copy(cNb2.begin(),cNb2.end(),c2->getPointer());
+ MCAuto<DataArrayDouble> coo(DataArrayDouble::Aggregate(coordss));
+ MCAuto<MEDCouplingUMesh> ret(MEDCouplingUMesh::New("Intersect2D",2));
+ MCAuto<DataArrayInt> conn(DataArrayInt::New()); conn->alloc((int)cr.size(),1); std::copy(cr.begin(),cr.end(),conn->getPointer());
+ MCAuto<DataArrayInt> connI(DataArrayInt::New()); connI->alloc((int)crI.size(),1); std::copy(crI.begin(),crI.end(),connI->getPointer());
+ MCAuto<DataArrayInt> c1(DataArrayInt::New()); c1->alloc((int)cNb1.size(),1); std::copy(cNb1.begin(),cNb1.end(),c1->getPointer());
+ MCAuto<DataArrayInt> c2(DataArrayInt::New()); c2->alloc((int)cNb2.size(),1); std::copy(cNb2.begin(),cNb2.end(),c2->getPointer());
ret->setConnectivity(conn,connI,true);
ret->setCoords(coo);
cellNb1=c1.retn(); cellNb2=c2.retn();
}
MEDCouplingUMesh *BuildMesh1DCutFrom(const MEDCouplingUMesh *mesh1D, const std::vector< std::vector<int> >& intersectEdge2, const DataArrayDouble *coords1, const std::vector<double>& addCoo, const std::map<int,int>& mergedNodes, const std::vector< std::vector<int> >& colinear2, const std::vector< std::vector<int> >& intersectEdge1,
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt>& idsInRetColinear, MEDCouplingAutoRefCountObjectPtr<DataArrayInt>& idsInMesh1DForIdsInRetColinear)
+ MCAuto<DataArrayInt>& idsInRetColinear, MCAuto<DataArrayInt>& idsInMesh1DForIdsInRetColinear)
{
idsInRetColinear=DataArrayInt::New(); idsInRetColinear->alloc(0,1);
idsInMesh1DForIdsInRetColinear=DataArrayInt::New(); idsInMesh1DForIdsInRetColinear->alloc(0,1);
int offset2(offset1+coo2->getNumberOfTuples());
int offset3(offset2+addCoo.size()/2);
std::vector<double> addCooQuad;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cOut(DataArrayInt::New()),ciOut(DataArrayInt::New()); cOut->alloc(0,1); ciOut->alloc(1,1); ciOut->setIJ(0,0,0);
+ MCAuto<DataArrayInt> cOut(DataArrayInt::New()),ciOut(DataArrayInt::New()); cOut->alloc(0,1); ciOut->alloc(1,1); ciOut->setIJ(0,0,0);
int tmp[4],cicnt(0),kk(0);
for(int i=0;i<nCells;i++)
{
- std::map<MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node>,int> m;
+ std::map<MCAuto<INTERP_KERNEL::Node>,int> m;
INTERP_KERNEL::Edge *e(MEDCouplingUMeshBuildQPFromEdge2((INTERP_KERNEL::NormalizedCellType)c[ci[i]],c+ci[i]+1,coo2Ptr,m));
const std::vector<int>& subEdges(intersectEdge2[i]);
int nbSubEdge(subEdges.size()/2);
for(int j=0;j<nbSubEdge;j++,kk++)
{
- MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node> n1(MEDCouplingUMeshBuildQPNode(subEdges[2*j],coords1->begin(),offset1,coo2Ptr,offset2,addCoo)),n2(MEDCouplingUMeshBuildQPNode(subEdges[2*j+1],coords1->begin(),offset1,coo2Ptr,offset2,addCoo));
- MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> e2(e->buildEdgeLyingOnMe(n1,n2));
+ MCAuto<INTERP_KERNEL::Node> n1(MEDCouplingUMeshBuildQPNode(subEdges[2*j],coords1->begin(),offset1,coo2Ptr,offset2,addCoo)),n2(MEDCouplingUMeshBuildQPNode(subEdges[2*j+1],coords1->begin(),offset1,coo2Ptr,offset2,addCoo));
+ MCAuto<INTERP_KERNEL::Edge> e2(e->buildEdgeLyingOnMe(n1,n2));
INTERP_KERNEL::Edge *e2Ptr(e2);
std::map<int,int>::const_iterator itm;
if(dynamic_cast<INTERP_KERNEL::EdgeArcCircle *>(e2Ptr))
}
e->decrRef();
}
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret(MEDCouplingUMesh::New(mesh1D->getName(),1));
+ MCAuto<MEDCouplingUMesh> ret(MEDCouplingUMesh::New(mesh1D->getName(),1));
ret->setConnectivity(cOut,ciOut,true);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> arr3(DataArrayDouble::New());
+ MCAuto<DataArrayDouble> arr3(DataArrayDouble::New());
arr3->useArray(&addCoo[0],false,C_DEALLOC,(int)addCoo.size()/2,2);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> arr4(DataArrayDouble::New()); arr4->useArray(&addCooQuad[0],false,C_DEALLOC,(int)addCooQuad.size()/2,2);
+ MCAuto<DataArrayDouble> arr4(DataArrayDouble::New()); arr4->useArray(&addCooQuad[0],false,C_DEALLOC,(int)addCooQuad.size()/2,2);
std::vector<const DataArrayDouble *> coordss(4);
coordss[0]=coords1; coordss[1]=mesh1D->getCoords(); coordss[2]=arr3; coordss[3]=arr4;
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> arr(DataArrayDouble::Aggregate(coordss));
+ MCAuto<DataArrayDouble> arr(DataArrayDouble::Aggregate(coordss));
ret->setCoords(arr);
return ret.retn();
}
if(nb%2!=0)
throw INTERP_KERNEL::Exception("BuildRefined2DCellLinear : internal error 1 !");
std::size_t nbOfEdgesOf2DCellSplit(nb/2);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret(MEDCouplingUMesh::New("",2));
+ MCAuto<MEDCouplingUMesh> ret(MEDCouplingUMesh::New("",2));
ret->setCoords(coords);
ret->allocateCells(1);
std::vector<int> connOut(nbOfEdgesOf2DCellSplit);
INTERP_KERNEL::AutoPtr<int> tmpPtr(new int[ci[cellIdInMesh2D+1]-ci[cellIdInMesh2D]]);
std::vector<int> allEdges,centers;
const double *coordsPtr(coords->begin());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> addCoo(DataArrayDouble::New()); addCoo->alloc(0,1);
+ MCAuto<DataArrayDouble> addCoo(DataArrayDouble::New()); addCoo->alloc(0,1);
int offset(coords->getNumberOfTuples());
for(const int *it2(descBg);it2!=descEnd;it2++,ii++)
{
else
{//the current edge has been subsplit -> create corresponding centers.
std::size_t nbOfCentersToAppend(edge1.size()/2);
- std::map< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node>,int> m;
- MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> ee(MEDCouplingUMeshBuildQPFromEdge2(typeOfSon,tmpPtr,coordsPtr,m));
+ std::map< MCAuto<INTERP_KERNEL::Node>,int> m;
+ MCAuto<INTERP_KERNEL::Edge> ee(MEDCouplingUMeshBuildQPFromEdge2(typeOfSon,tmpPtr,coordsPtr,m));
std::vector<int>::const_iterator it3(allEdges.end()-edge1.size());
for(std::size_t k=0;k<nbOfCentersToAppend;k++)
{
if(nb%2!=0)
throw INTERP_KERNEL::Exception("BuildRefined2DCellQuadratic : internal error 2 !");
std::size_t nbOfEdgesOf2DCellSplit(nb/2);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret(MEDCouplingUMesh::New("",2));
+ MCAuto<MEDCouplingUMesh> ret(MEDCouplingUMesh::New("",2));
if(addCoo->empty())
ret->setCoords(coords);
else
return BuildRefined2DCellQuadratic(coords,mesh2D,cellIdInMesh2D,descBg,descEnd,intersectEdge1);
}
-void AddCellInMesh2D(MEDCouplingUMesh *mesh2D, const std::vector<int>& conn, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& edges)
+void AddCellInMesh2D(MEDCouplingUMesh *mesh2D, const std::vector<int>& conn, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& edges)
{
bool isQuad(false);
- for(std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >::const_iterator it=edges.begin();it!=edges.end();it++)
+ for(std::vector< MCAuto<INTERP_KERNEL::Edge> >::const_iterator it=edges.begin();it!=edges.end();it++)
{
const INTERP_KERNEL::Edge *ee(*it);
if(dynamic_cast<const INTERP_KERNEL::EdgeArcCircle *>(ee))
* This method cuts in 2 parts the input 2D cell given using boundaries description (\a edge1Bis and \a edge1BisPtr) using
* a set of edges defined in \a splitMesh1D.
*/
-void BuildMesh2DCutInternal2(const MEDCouplingUMesh *splitMesh1D, const std::vector<int>& edge1Bis, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& edge1BisPtr,
- std::vector< std::vector<int> >& out0, std::vector< std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> > >& out1)
+void BuildMesh2DCutInternal2(const MEDCouplingUMesh *splitMesh1D, const std::vector<int>& edge1Bis, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& edge1BisPtr,
+ std::vector< std::vector<int> >& out0, std::vector< std::vector< MCAuto<INTERP_KERNEL::Edge> > >& out1)
{
std::size_t nb(edge1Bis.size()/2);
std::size_t nbOfEdgesOf2DCellSplit(nb/2);
out0.resize(1); out1.resize(1);
std::vector<int>& connOut(out0[0]);
connOut.resize(nbOfEdgesOf2DCellSplit);
- std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& edgesPtr(out1[0]);
+ std::vector< MCAuto<INTERP_KERNEL::Edge> >& edgesPtr(out1[0]);
edgesPtr.resize(nbOfEdgesOf2DCellSplit);
for(std::size_t kk=0;kk<nbOfEdgesOf2DCellSplit;kk++)
{
out0.resize(2); out1.resize(2);
std::vector<int>& connOutLeft(out0[0]);
std::vector<int>& connOutRight(out0[1]);//connOutLeft should end with edge1Bis[2*ii] and connOutRight should end with edge1Bis[2*jj+1]
- std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& eleft(out1[0]);
- std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& eright(out1[1]);
+ std::vector< MCAuto<INTERP_KERNEL::Edge> >& eleft(out1[0]);
+ std::vector< MCAuto<INTERP_KERNEL::Edge> >& eright(out1[1]);
for(std::size_t k=ii;k<jj+1;k++)
{ connOutLeft.push_back(edge1Bis[2*k+1]); eleft.push_back(edge1BisPtr[2*k+1]); }
- std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> > ees(iEnd);
+ std::vector< MCAuto<INTERP_KERNEL::Edge> > ees(iEnd);
for(int ik=0;ik<iEnd;ik++)
{
- std::map< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node>,int> m;
- MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> ee(MEDCouplingUMeshBuildQPFromEdge2((INTERP_KERNEL::NormalizedCellType)cSplitPtr[ciSplitPtr[ik]],cSplitPtr+ciSplitPtr[ik]+1,splitMesh1D->getCoords()->begin(),m));
+ std::map< MCAuto<INTERP_KERNEL::Node>,int> m;
+ MCAuto<INTERP_KERNEL::Edge> ee(MEDCouplingUMeshBuildQPFromEdge2((INTERP_KERNEL::NormalizedCellType)cSplitPtr[ciSplitPtr[ik]],cSplitPtr+ciSplitPtr[ik]+1,splitMesh1D->getCoords()->begin(),m));
ees[ik]=ee;
}
for(int ik=iEnd-1;ik>=0;ik--)
{
public:
CellInfo() { }
- CellInfo(const std::vector<int>& edges, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& edgesPtr);
+ CellInfo(const std::vector<int>& edges, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& edgesPtr);
public:
std::vector<int> _edges;
- std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> > _edges_ptr;
+ std::vector< MCAuto<INTERP_KERNEL::Edge> > _edges_ptr;
};
-CellInfo::CellInfo(const std::vector<int>& edges, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& edgesPtr)
+CellInfo::CellInfo(const std::vector<int>& edges, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& edgesPtr)
{
std::size_t nbe(edges.size());
- std::vector<int> edges2(2*nbe); std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> > edgesPtr2(2*nbe);
+ std::vector<int> edges2(2*nbe); std::vector< MCAuto<INTERP_KERNEL::Edge> > edgesPtr2(2*nbe);
for(std::size_t i=0;i<nbe;i++)
{
edges2[2*i]=edges[i]; edges2[2*i+1]=edges[(i+1)%nbe];
class EdgeInfo
{
public:
- EdgeInfo(int istart, int iend, const MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh>& mesh):_istart(istart),_iend(iend),_mesh(mesh),_left(-7),_right(-7) { }
- EdgeInfo(int istart, int iend, int pos, const MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge>& edge):_istart(istart),_iend(iend),_edge(edge),_left(pos),_right(pos+1) { }
+ EdgeInfo(int istart, int iend, const MCAuto<MEDCouplingUMesh>& mesh):_istart(istart),_iend(iend),_mesh(mesh),_left(-7),_right(-7) { }
+ EdgeInfo(int istart, int iend, int pos, const MCAuto<INTERP_KERNEL::Edge>& edge):_istart(istart),_iend(iend),_edge(edge),_left(pos),_right(pos+1) { }
bool isInMyRange(int pos) const { return pos>=_istart && pos<_iend; }
- void somethingHappendAt(int pos, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& newLeft, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& newRight);
+ void somethingHappendAt(int pos, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& newLeft, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& newRight);
void feedEdgeInfoAt(double eps, const MEDCouplingUMesh *mesh2D, int offset, int neighbors[2]) const;
private:
int _istart;
int _iend;
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> _mesh;
- MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> _edge;
+ MCAuto<MEDCouplingUMesh> _mesh;
+ MCAuto<INTERP_KERNEL::Edge> _edge;
int _left;
int _right;
};
-void EdgeInfo::somethingHappendAt(int pos, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& newLeft, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& newRight)
+void EdgeInfo::somethingHappendAt(int pos, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& newLeft, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& newRight)
{
const MEDCouplingUMesh *mesh(_mesh);
if(mesh)
}
else
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> barys(mesh->getBarycenterAndOwner());
+ MCAuto<DataArrayDouble> barys(mesh->computeCellCenterOfMass());
int cellId(mesh2D->getCellContainingPoint(barys->begin(),eps));
if(cellId==-1)
throw INTERP_KERNEL::Exception("EdgeInfo::feedEdgeInfoAt : internal error !");
class VectorOfCellInfo
{
public:
- VectorOfCellInfo(const std::vector<int>& edges, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& edgesPtr);
+ VectorOfCellInfo(const std::vector<int>& edges, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& edgesPtr);
std::size_t size() const { return _pool.size(); }
int getPositionOf(double eps, const MEDCouplingUMesh *mesh) const;
- void setMeshAt(int pos, const MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh>& mesh, int istart, int iend, const MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh>& mesh1DInCase, const std::vector< std::vector<int> >& edges, const std::vector< std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> > >& edgePtrs);
+ void setMeshAt(int pos, const MCAuto<MEDCouplingUMesh>& mesh, int istart, int iend, const MCAuto<MEDCouplingUMesh>& mesh1DInCase, const std::vector< std::vector<int> >& edges, const std::vector< std::vector< MCAuto<INTERP_KERNEL::Edge> > >& edgePtrs);
const std::vector<int>& getConnOf(int pos) const { return get(pos)._edges; }
- const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& getEdgePtrOf(int pos) const { return get(pos)._edges_ptr; }
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> getZeMesh() const { return _ze_mesh; }
+ const std::vector< MCAuto<INTERP_KERNEL::Edge> >& getEdgePtrOf(int pos) const { return get(pos)._edges_ptr; }
+ MCAuto<MEDCouplingUMesh> getZeMesh() const { return _ze_mesh; }
void feedEdgeInfoAt(double eps, int pos, int offset, int neighbors[2]) const;
private:
int getZePosOfEdgeGivenItsGlobalId(int pos) const;
- void updateEdgeInfo(int pos, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& newLeft, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& newRight);
+ void updateEdgeInfo(int pos, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& newLeft, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& newRight);
const CellInfo& get(int pos) const;
CellInfo& get(int pos);
private:
std::vector<CellInfo> _pool;
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> _ze_mesh;
+ MCAuto<MEDCouplingUMesh> _ze_mesh;
std::vector<EdgeInfo> _edge_info;
};
-VectorOfCellInfo::VectorOfCellInfo(const std::vector<int>& edges, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& edgesPtr):_pool(1)
+VectorOfCellInfo::VectorOfCellInfo(const std::vector<int>& edges, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& edgesPtr):_pool(1)
{
_pool[0]._edges=edges;
_pool[0]._edges_ptr=edgesPtr;
const MEDCouplingUMesh *zeMesh(_ze_mesh);
if(!zeMesh)
throw INTERP_KERNEL::Exception("VectorOfCellSplitter::getPositionOf : null aggregated mesh !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> barys(mesh->getBarycenterAndOwner());
+ MCAuto<DataArrayDouble> barys(mesh->computeCellCenterOfMass());
return zeMesh->getCellContainingPoint(barys->begin(),eps);
}
-void VectorOfCellInfo::setMeshAt(int pos, const MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh>& mesh, int istart, int iend, const MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh>& mesh1DInCase, const std::vector< std::vector<int> >& edges, const std::vector< std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> > >& edgePtrs)
+void VectorOfCellInfo::setMeshAt(int pos, const MCAuto<MEDCouplingUMesh>& mesh, int istart, int iend, const MCAuto<MEDCouplingUMesh>& mesh1DInCase, const std::vector< std::vector<int> >& edges, const std::vector< std::vector< MCAuto<INTERP_KERNEL::Edge> > >& edgePtrs)
{
get(pos);//to check pos
bool isFast(pos==0 && _pool.size()==1);
return ;
}
//
- std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> > ms;
+ std::vector< MCAuto<MEDCouplingUMesh> > ms;
if(pos>0)
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> elt(static_cast<MEDCouplingUMesh *>(_ze_mesh->buildPartOfMySelf2(0,pos,true)));
+ MCAuto<MEDCouplingUMesh> elt(static_cast<MEDCouplingUMesh *>(_ze_mesh->buildPartOfMySelfSlice(0,pos,true)));
ms.push_back(elt);
}
ms.push_back(mesh);
if(pos<_ze_mesh->getNumberOfCells()-1)
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> elt(static_cast<MEDCouplingUMesh *>(_ze_mesh->buildPartOfMySelf2(pos+1,_ze_mesh->getNumberOfCells(),true)));
+ MCAuto<MEDCouplingUMesh> elt(static_cast<MEDCouplingUMesh *>(_ze_mesh->buildPartOfMySelfSlice(pos+1,_ze_mesh->getNumberOfCells(),true)));
ms.push_back(elt);
}
std::vector< const MEDCouplingUMesh *> ms2(ms.size());
throw INTERP_KERNEL::Exception("VectorOfCellInfo::getZePosOfEdgeGivenItsGlobalId : invalid id !");
}
-void VectorOfCellInfo::updateEdgeInfo(int pos, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& newLeft, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& newRight)
+void VectorOfCellInfo::updateEdgeInfo(int pos, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& newLeft, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& newRight)
{
get(pos);//to check;
if(_edge_info.empty())
*
* \param [in] allEdges a list of pairs (beginNode, endNode). Linked with \a allEdgesPtr to get the equation of edge.
*/
-MEDCouplingUMesh *BuildMesh2DCutInternal(double eps, const MEDCouplingUMesh *splitMesh1D, const std::vector<int>& allEdges, const std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> >& allEdgesPtr, int offset,
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt>& idsLeftRight)
+MEDCouplingUMesh *BuildMesh2DCutInternal(double eps, const MEDCouplingUMesh *splitMesh1D, const std::vector<int>& allEdges, const std::vector< MCAuto<INTERP_KERNEL::Edge> >& allEdgesPtr, int offset,
+ MCAuto<DataArrayInt>& idsLeftRight)
{
int nbCellsInSplitMesh1D(splitMesh1D->getNumberOfCells());
if(nbCellsInSplitMesh1D==0)
if(nb%2!=0)
throw INTERP_KERNEL::Exception("BuildMesh2DCutFrom : internal error 2 !");
std::vector<int> edge1Bis(nb*2);
- std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> > edge1BisPtr(nb*2);
+ std::vector< MCAuto<INTERP_KERNEL::Edge> > edge1BisPtr(nb*2);
std::copy(allEdges.begin(),allEdges.end(),edge1Bis.begin());
std::copy(allEdges.begin(),allEdges.end(),edge1Bis.begin()+nb);
std::copy(allEdgesPtr.begin(),allEdgesPtr.end(),edge1BisPtr.begin());
if(iEnd<nbCellsInSplitMesh1D)
iEnd++;
//
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> partOfSplitMesh1D(static_cast<MEDCouplingUMesh *>(splitMesh1D->buildPartOfMySelf2(iStart,iEnd,1,true)));
+ MCAuto<MEDCouplingUMesh> partOfSplitMesh1D(static_cast<MEDCouplingUMesh *>(splitMesh1D->buildPartOfMySelfSlice(iStart,iEnd,1,true)));
int pos(pool.getPositionOf(eps,partOfSplitMesh1D));
//
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh>retTmp(MEDCouplingUMesh::New("",2));
+ MCAuto<MEDCouplingUMesh>retTmp(MEDCouplingUMesh::New("",2));
retTmp->setCoords(splitMesh1D->getCoords());
retTmp->allocateCells();
std::vector< std::vector<int> > out0;
- std::vector< std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> > > out1;
+ std::vector< std::vector< MCAuto<INTERP_KERNEL::Edge> > > out1;
BuildMesh2DCutInternal2(partOfSplitMesh1D,pool.getConnOf(pos),pool.getEdgePtrOf(pos),out0,out1);
for(std::size_t cnt=0;cnt<out0.size();cnt++)
MEDCouplingUMesh *BuildMesh2DCutFrom(double eps, int cellIdInMesh2D, const MEDCouplingUMesh *mesh2DDesc, const MEDCouplingUMesh *splitMesh1D,
const int *descBg, const int *descEnd, const std::vector< std::vector<int> >& intersectEdge1, int offset,
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt>& idsLeftRight)
+ MCAuto<DataArrayInt>& idsLeftRight)
{
const int *cdescPtr(mesh2DDesc->getNodalConnectivity()->begin()),*cidescPtr(mesh2DDesc->getNodalConnectivityIndex()->begin());
//
std::vector<int> allEdges;
- std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> > allEdgesPtr; // for each sub edge in splitMesh2D the uncut Edge object of the original mesh2D
+ std::vector< MCAuto<INTERP_KERNEL::Edge> > allEdgesPtr; // for each sub edge in splitMesh2D the uncut Edge object of the original mesh2D
for(const int *it(descBg);it!=descEnd;it++) // for all edges in the descending connectivity of the 2D mesh in relative Fortran mode
{
int edgeId(std::abs(*it)-1);
- std::map< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node>,int> m;
- MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> ee(MEDCouplingUMeshBuildQPFromEdge2((INTERP_KERNEL::NormalizedCellType)cdescPtr[cidescPtr[edgeId]],cdescPtr+cidescPtr[edgeId]+1,mesh2DDesc->getCoords()->begin(),m));
+ std::map< MCAuto<INTERP_KERNEL::Node>,int> m;
+ MCAuto<INTERP_KERNEL::Edge> ee(MEDCouplingUMeshBuildQPFromEdge2((INTERP_KERNEL::NormalizedCellType)cdescPtr[cidescPtr[edgeId]],cdescPtr+cidescPtr[edgeId]+1,mesh2DDesc->getCoords()->begin(),m));
const std::vector<int>& edge1(intersectEdge1[edgeId]);
if(*it>0)
allEdges.insert(allEdges.end(),edge1.begin(),edge1.end());
if(std::distance(candidatesIn2DBg,candidatesIn2DEnd)==1)
return *candidatesIn2DBg;
int edgeId(std::abs(cellIdInMesh1DSplitRelative)-1);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> cur1D(static_cast<MEDCouplingUMesh *>(mesh1DSplit->buildPartOfMySelf(&edgeId,&edgeId+1,true)));
+ MCAuto<MEDCouplingUMesh> cur1D(static_cast<MEDCouplingUMesh *>(mesh1DSplit->buildPartOfMySelf(&edgeId,&edgeId+1,true)));
if(cellIdInMesh1DSplitRelative<0)
cur1D->changeOrientationOfCells();
const int *c1D(cur1D->getNodalConnectivity()->begin());
const INTERP_KERNEL::CellModel& ref1DType(INTERP_KERNEL::CellModel::GetCellModel((INTERP_KERNEL::NormalizedCellType)c1D[0]));
for(const int *it=candidatesIn2DBg;it!=candidatesIn2DEnd;it++)
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> cur2D(static_cast<MEDCouplingUMesh *>(mesh2DSplit->buildPartOfMySelf(it,it+1,true)));
+ MCAuto<MEDCouplingUMesh> cur2D(static_cast<MEDCouplingUMesh *>(mesh2DSplit->buildPartOfMySelf(it,it+1,true)));
const int *c(cur2D->getNodalConnectivity()->begin()),*ci(cur2D->getNodalConnectivityIndex()->begin());
const INTERP_KERNEL::CellModel &cm(INTERP_KERNEL::CellModel::GetCellModel((INTERP_KERNEL::NormalizedCellType)c[ci[0]]));
unsigned sz(cm.getNumberOfSons2(c+ci[0]+1,ci[1]-ci[0]-1));
//
// Build desc connectivity
DataArrayInt *desc1(DataArrayInt::New()),*descIndx1(DataArrayInt::New()),*revDesc1(DataArrayInt::New()),*revDescIndx1(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> dd1(desc1),dd2(descIndx1),dd3(revDesc1),dd4(revDescIndx1);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m1Desc(mesh2D->buildDescendingConnectivity2(desc1,descIndx1,revDesc1,revDescIndx1));
+ MCAuto<DataArrayInt> dd1(desc1),dd2(descIndx1),dd3(revDesc1),dd4(revDescIndx1);
+ MCAuto<MEDCouplingUMesh> m1Desc(mesh2D->buildDescendingConnectivity2(desc1,descIndx1,revDesc1,revDescIndx1));
std::map<int,int> mergedNodes;
Intersect1DMeshes(m1Desc,mesh1D,eps,intersectEdge1,colinear2,subDiv2,addCoo,mergedNodes);
// use mergeNodes to fix intersectEdge1
(*it0)[2*n-1]=(*it1).second;
}
//
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> addCooDa(DataArrayDouble::New());
+ MCAuto<DataArrayDouble> addCooDa(DataArrayDouble::New());
addCooDa->useArray(&addCoo[0],false,C_DEALLOC,(int)addCoo.size()/2,2);
// Step 2: re-order newly created nodes according to the ordering found in m2
std::vector< std::vector<int> > intersectEdge2;
BuildIntersectEdges(m1Desc,mesh1D,addCoo,subDiv2,intersectEdge2);
subDiv2.clear();
// Step 3: compute splitMesh1D
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> idsInRet1Colinear,idsInDescMesh2DForIdsInRetColinear;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret2(DataArrayInt::New()); ret2->alloc(0,1);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret1(BuildMesh1DCutFrom(mesh1D,intersectEdge2,mesh2D->getCoords(),addCoo,mergedNodes,colinear2,intersectEdge1,
+ MCAuto<DataArrayInt> idsInRet1Colinear,idsInDescMesh2DForIdsInRetColinear;
+ MCAuto<DataArrayInt> ret2(DataArrayInt::New()); ret2->alloc(0,1);
+ MCAuto<MEDCouplingUMesh> ret1(BuildMesh1DCutFrom(mesh1D,intersectEdge2,mesh2D->getCoords(),addCoo,mergedNodes,colinear2,intersectEdge1,
idsInRet1Colinear,idsInDescMesh2DForIdsInRetColinear));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret3(DataArrayInt::New()); ret3->alloc(ret1->getNumberOfCells()*2,1); ret3->fillWithValue(std::numeric_limits<int>::max()); ret3->rearrange(2);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> idsInRet1NotColinear(idsInRet1Colinear->buildComplement(ret1->getNumberOfCells()));
+ MCAuto<DataArrayInt> ret3(DataArrayInt::New()); ret3->alloc(ret1->getNumberOfCells()*2,1); ret3->fillWithValue(std::numeric_limits<int>::max()); ret3->rearrange(2);
+ MCAuto<DataArrayInt> idsInRet1NotColinear(idsInRet1Colinear->buildComplement(ret1->getNumberOfCells()));
// deal with cells in mesh2D that are not cut but only some of their edges are
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> idsInDesc2DToBeRefined(idsInDescMesh2DForIdsInRetColinear->deepCpy());
+ MCAuto<DataArrayInt> idsInDesc2DToBeRefined(idsInDescMesh2DForIdsInRetColinear->deepCopy());
idsInDesc2DToBeRefined->abs(); idsInDesc2DToBeRefined->applyLin(1,-1);
idsInDesc2DToBeRefined=idsInDesc2DToBeRefined->buildUnique();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> out0s;//ids in mesh2D that are impacted by the fact that some edges of \a mesh1D are part of the edges of those cells
+ MCAuto<DataArrayInt> out0s;//ids in mesh2D that are impacted by the fact that some edges of \a mesh1D are part of the edges of those cells
if(!idsInDesc2DToBeRefined->empty())
{
DataArrayInt *out0(0),*outi0(0);
MEDCouplingUMesh::ExtractFromIndexedArrays(idsInDesc2DToBeRefined->begin(),idsInDesc2DToBeRefined->end(),dd3,dd4,out0,outi0);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> outi0s(outi0);
+ MCAuto<DataArrayInt> outi0s(outi0);
out0s=out0;
out0s=out0s->buildUnique();
out0s->sort(true);
}
//
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret1NonCol(static_cast<MEDCouplingUMesh *>(ret1->buildPartOfMySelf(idsInRet1NotColinear->begin(),idsInRet1NotColinear->end())));
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> baryRet1(ret1NonCol->getBarycenterAndOwner());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> elts,eltsIndex;
+ MCAuto<MEDCouplingUMesh> ret1NonCol(static_cast<MEDCouplingUMesh *>(ret1->buildPartOfMySelf(idsInRet1NotColinear->begin(),idsInRet1NotColinear->end())));
+ MCAuto<DataArrayDouble> baryRet1(ret1NonCol->computeCellCenterOfMass());
+ MCAuto<DataArrayInt> elts,eltsIndex;
mesh2D->getCellsContainingPoints(baryRet1->begin(),baryRet1->getNumberOfTuples(),eps,elts,eltsIndex);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> eltsIndex2(eltsIndex->deltaShiftIndex());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> eltsIndex3(eltsIndex2->getIdsEqual(1));
+ MCAuto<DataArrayInt> eltsIndex2(eltsIndex->deltaShiftIndex());
+ MCAuto<DataArrayInt> eltsIndex3(eltsIndex2->findIdsEqual(1));
if(eltsIndex2->count(0)+eltsIndex3->getNumberOfTuples()!=ret1NonCol->getNumberOfCells())
throw INTERP_KERNEL::Exception("Intersect2DMeshWith1DLine : internal error 1 !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellsToBeModified(elts->buildUnique());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> untouchedCells(cellsToBeModified->buildComplement(mesh2D->getNumberOfCells()));
+ MCAuto<DataArrayInt> cellsToBeModified(elts->buildUnique());
+ MCAuto<DataArrayInt> untouchedCells(cellsToBeModified->buildComplement(mesh2D->getNumberOfCells()));
if((DataArrayInt *)out0s)
untouchedCells=untouchedCells->buildSubstraction(out0s);//if some edges in ret1 are colinear to descending mesh of mesh2D remove cells from untouched one
- std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> > outMesh2DSplit;
+ std::vector< MCAuto<MEDCouplingUMesh> > outMesh2DSplit;
// OK all is ready to insert in ret2 mesh
if(!untouchedCells->empty())
{// the most easy part, cells in mesh2D not impacted at all
}
if((DataArrayInt *)out0s)
{// here dealing with cells in out0s but not in cellsToBeModified
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> fewModifiedCells(out0s->buildSubstraction(cellsToBeModified));
+ MCAuto<DataArrayInt> fewModifiedCells(out0s->buildSubstraction(cellsToBeModified));
const int *rdptr(dd3->begin()),*rdiptr(dd4->begin()),*dptr(dd1->begin()),*diptr(dd2->begin());
for(const int *it=fewModifiedCells->begin();it!=fewModifiedCells->end();it++)
{
}
int offset(ret2->getNumberOfTuples());
ret2->pushBackValsSilent(fewModifiedCells->begin(),fewModifiedCells->end());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> partOfRet3(DataArrayInt::New()); partOfRet3->alloc(2*idsInRet1Colinear->getNumberOfTuples(),1);
+ MCAuto<DataArrayInt> partOfRet3(DataArrayInt::New()); partOfRet3->alloc(2*idsInRet1Colinear->getNumberOfTuples(),1);
partOfRet3->fillWithValue(std::numeric_limits<int>::max()); partOfRet3->rearrange(2);
int kk(0),*ret3ptr(partOfRet3->getPointer());
for(const int *it=idsInDescMesh2DForIdsInRetColinear->begin();it!=idsInDescMesh2DForIdsInRetColinear->end();it++,kk++)
int faceId(std::abs(*it)-1);
for(const int *it2=rdptr+rdiptr[faceId];it2!=rdptr+rdiptr[faceId+1];it2++)
{
- int tmp(fewModifiedCells->locateValue(*it2));
+ int tmp(fewModifiedCells->findIdFirstEqual(*it2));
if(tmp!=-1)
{
if(std::find(dptr+diptr[*it2],dptr+diptr[*it2+1],-(*it))!=dptr+diptr[*it2+1])
if(!outMesh2DSplit.empty())
{
DataArrayDouble *da(outMesh2DSplit.back()->getCoords());
- for(std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> >::iterator itt=outMesh2DSplit.begin();itt!=outMesh2DSplit.end();itt++)
+ for(std::vector< MCAuto<MEDCouplingUMesh> >::iterator itt=outMesh2DSplit.begin();itt!=outMesh2DSplit.end();itt++)
(*itt)->setCoords(da);
}
}
cellsToBeModified=cellsToBeModified->buildUniqueNotSorted();
for(const int *it=cellsToBeModified->begin();it!=cellsToBeModified->end();it++)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> idsNonColPerCell(elts->getIdsEqual(*it));
+ MCAuto<DataArrayInt> idsNonColPerCell(elts->findIdsEqual(*it));
idsNonColPerCell->transformWithIndArr(eltsIndex3->begin(),eltsIndex3->end());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> idsNonColPerCell2(idsInRet1NotColinear->selectByTupleId(idsNonColPerCell->begin(),idsNonColPerCell->end()));
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> partOfMesh1CuttingCur2DCell(static_cast<MEDCouplingUMesh *>(ret1NonCol->buildPartOfMySelf(idsNonColPerCell->begin(),idsNonColPerCell->end())));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> partOfRet3;
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> splitOfOneCell(BuildMesh2DCutFrom(eps,*it,m1Desc,partOfMesh1CuttingCur2DCell,dd1->begin()+dd2->getIJ(*it,0),dd1->begin()+dd2->getIJ((*it)+1,0),intersectEdge1,ret2->getNumberOfTuples(),partOfRet3));
+ MCAuto<DataArrayInt> idsNonColPerCell2(idsInRet1NotColinear->selectByTupleId(idsNonColPerCell->begin(),idsNonColPerCell->end()));
+ MCAuto<MEDCouplingUMesh> partOfMesh1CuttingCur2DCell(static_cast<MEDCouplingUMesh *>(ret1NonCol->buildPartOfMySelf(idsNonColPerCell->begin(),idsNonColPerCell->end())));
+ MCAuto<DataArrayInt> partOfRet3;
+ MCAuto<MEDCouplingUMesh> splitOfOneCell(BuildMesh2DCutFrom(eps,*it,m1Desc,partOfMesh1CuttingCur2DCell,dd1->begin()+dd2->getIJ(*it,0),dd1->begin()+dd2->getIJ((*it)+1,0),intersectEdge1,ret2->getNumberOfTuples(),partOfRet3));
ret3->setPartOfValues3(partOfRet3,idsNonColPerCell2->begin(),idsNonColPerCell2->end(),0,2,1,true);
outMesh2DSplit.push_back(splitOfOneCell);
for(int i=0;i<splitOfOneCell->getNumberOfCells();i++)
tmp[i]=outMesh2DSplit[i];
//
ret1->getCoords()->setInfoOnComponents(compNames);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret2D(MEDCouplingUMesh::MergeUMeshesOnSameCoords(tmp));
+ MCAuto<MEDCouplingUMesh> ret2D(MEDCouplingUMesh::MergeUMeshesOnSameCoords(tmp));
// To finish - filter ret3 - std::numeric_limits<int>::max() -> -1 - negate values must be resolved.
ret3->rearrange(1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> edgesToDealWith(ret3->getIdsStrictlyNegative());
+ MCAuto<DataArrayInt> edgesToDealWith(ret3->findIdsStricltyNegative());
for(const int *it=edgesToDealWith->begin();it!=edgesToDealWith->end();it++)
{
int old2DCellId(-ret3->getIJ(*it,0)-1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> candidates(ret2->getIdsEqual(old2DCellId));
+ MCAuto<DataArrayInt> candidates(ret2->findIdsEqual(old2DCellId));
ret3->setIJ(*it,0,FindRightCandidateAmong(ret2D,candidates->begin(),candidates->end(),ret1,*it%2==0?-((*it)/2+1):(*it)/2+1,eps));// div by 2 because 2 components natively in ret3
}
- ret3->replaceOneValByInThis(std::numeric_limits<int>::max(),-1);
+ ret3->changeValue(std::numeric_limits<int>::max(),-1);
ret3->rearrange(2);
//
splitMesh1D=ret1.retn();
const int *conn2(m2->getNodalConnectivity()->getConstPointer()),*connI2(m2->getNodalConnectivityIndex()->getConstPointer());
int offset2(offset1+m2->getNumberOfNodes());
int offset3(offset2+((int)addCoords.size())/2);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> bbox1Arr(m1->getBoundingBoxForBBTree()),bbox2Arr(m2->getBoundingBoxForBBTree());
+ MCAuto<DataArrayDouble> bbox1Arr(m1->getBoundingBoxForBBTree()),bbox2Arr(m2->getBoundingBoxForBBTree());
const double *bbox1(bbox1Arr->begin()),*bbox2(bbox2Arr->begin());
// Here a BBTree on 2D-cells, not on segments:
BBTree<SPACEDIM,int> myTree(bbox2,0,0,m2->getNumberOfCells(),eps);
catch(INTERP_KERNEL::Exception& e)
{
std::ostringstream oss; oss << "Error when computing residual of cell #" << i << " in source/m1 mesh ! Maybe the neighbours of this cell in mesh are not well connected !\n" << "The deep reason is the following : " << e.what();
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
for(std::map<int,INTERP_KERNEL::Node *>::const_iterator it=mappRev.begin();it!=mappRev.end();it++)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::orderConsecutiveCells1D works on unstructured mesh with meshdim = 1 !");
// Check that this is a line (and not a more complex 1D mesh) - each point is used at most by 2 segments:
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _d(DataArrayInt::New()),_dI(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _rD(DataArrayInt::New()),_rDI(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m_points(buildDescendingConnectivity(_d, _dI, _rD, _rDI));
+ MCAuto<DataArrayInt> _d(DataArrayInt::New()),_dI(DataArrayInt::New());
+ MCAuto<DataArrayInt> _rD(DataArrayInt::New()),_rDI(DataArrayInt::New());
+ MCAuto<MEDCouplingUMesh> m_points(buildDescendingConnectivity(_d, _dI, _rD, _rDI));
const int *d(_d->getConstPointer()), *dI(_dI->getConstPointer());
const int *rD(_rD->getConstPointer()), *rDI(_rDI->getConstPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> _dsi(_rDI->deltaShiftIndex());
+ MCAuto<DataArrayInt> _dsi(_rDI->deltaShiftIndex());
const int * dsi(_dsi->getConstPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> dsii = _dsi->getIdsNotInRange(0,3);
+ MCAuto<DataArrayInt> dsii = _dsi->findIdsNotInRange(0,3);
m_points=0;
if (dsii->getNumberOfTuples())
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::orderConsecutiveCells1D only work with a mesh being a (piecewise) connected line!");
int nc(getNumberOfCells());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> result(DataArrayInt::New());
+ MCAuto<DataArrayInt> result(DataArrayInt::New());
result->alloc(nc,1);
// set of edges not used so far
/// @cond INTERNAL
-void IKGeo2DInternalMapper2(INTERP_KERNEL::Node *n, const std::map<MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node>,int>& m, int forbVal0, int forbVal1, std::vector<int>& isect)
+void IKGeo2DInternalMapper2(INTERP_KERNEL::Node *n, const std::map<MCAuto<INTERP_KERNEL::Node>,int>& m, int forbVal0, int forbVal1, std::vector<int>& isect)
{
- MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node> nTmp(n); nTmp->incrRef();
- std::map<MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node>,int>::const_iterator it(m.find(nTmp));
+ MCAuto<INTERP_KERNEL::Node> nTmp(n); nTmp->incrRef();
+ std::map<MCAuto<INTERP_KERNEL::Node>,int>::const_iterator it(m.find(nTmp));
if(it==m.end())
throw INTERP_KERNEL::Exception("Internal error in remapping !");
int v((*it).second);
isect.push_back(v);
}
-bool IKGeo2DInternalMapper(const INTERP_KERNEL::ComposedEdge& c, const std::map<MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node>,int>& m, int forbVal0, int forbVal1, std::vector<int>& isect)
+bool IKGeo2DInternalMapper(const INTERP_KERNEL::ComposedEdge& c, const std::map<MCAuto<INTERP_KERNEL::Node>,int>& m, int forbVal0, int forbVal1, std::vector<int>& isect)
{
int sz(c.size());
if(sz<=1)
/// @endcond
/**
- * This method split some of edges of 2D cells in \a this. The edges to be split are specified in \a subNodesInSeg and in \a subNodesInSegI using index storage mode.
- * To do the work this method can optionally needs information about middle of subedges for quadratic cases if a minimal creation of new nodes is wanted.
- * So this method try to reduce at most the number of new nodes. The only case that can lead this method to add nodes if a SEG3 is split without information of middle.
- * \b WARNING : is returned value is different from 0 a call to MEDCouplingUMesh::mergeNodes is necessary to avoid to have a non conform mesh.
+ * This method split some of edges of 2D cells in \a this. The edges to be split are specified in \a subNodesInSeg
+ * and in \a subNodesInSegI using \ref numbering-indirect storage mode.
+ * To do the work this method can optionally needs information about middle of subedges for quadratic cases if
+ * a minimal creation of new nodes is wanted.
+ * So this method try to reduce at most the number of new nodes. The only case that can lead this method to add
+ * nodes if a SEG3 is split without information of middle.
+ * \b WARNING : is returned value is different from 0 a call to MEDCouplingUMesh::mergeNodes is necessary to
+ * avoid to have a non conform mesh.
*
* \return int - the number of new nodes created (in most of cases 0).
*
DataArrayInt *MEDCouplingUMesh::conformize2D(double eps)
{
static const int SPACEDIM=2;
- checkCoherency();
+ checkConsistencyLight();
if(getSpaceDimension()!=2 || getMeshDimension()!=2)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::conformize2D : This method only works for meshes with spaceDim=2 and meshDim=2 !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> desc1(DataArrayInt::New()),descIndx1(DataArrayInt::New()),revDesc1(DataArrayInt::New()),revDescIndx1(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> mDesc(buildDescendingConnectivity(desc1,descIndx1,revDesc1,revDescIndx1));
+ MCAuto<DataArrayInt> desc1(DataArrayInt::New()),descIndx1(DataArrayInt::New()),revDesc1(DataArrayInt::New()),revDescIndx1(DataArrayInt::New());
+ MCAuto<MEDCouplingUMesh> mDesc(buildDescendingConnectivity(desc1,descIndx1,revDesc1,revDescIndx1));
const int *c(mDesc->getNodalConnectivity()->getConstPointer()),*ci(mDesc->getNodalConnectivityIndex()->getConstPointer()),*rd(revDesc1->getConstPointer()),*rdi(revDescIndx1->getConstPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> bboxArr(mDesc->getBoundingBoxForBBTree());
+ MCAuto<DataArrayDouble> bboxArr(mDesc->getBoundingBoxForBBTree());
const double *bbox(bboxArr->begin()),*coords(getCoords()->begin());
int nCell(getNumberOfCells()),nDescCell(mDesc->getNumberOfCells());
std::vector< std::vector<int> > intersectEdge(nDescCell),overlapEdge(nDescCell);
for(std::vector<int>::const_iterator it=candidates.begin();it!=candidates.end();it++)
if(*it>i)
{
- std::map<MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node>,int> m;
+ std::map<MCAuto<INTERP_KERNEL::Node>,int> m;
INTERP_KERNEL::Edge *e1(MEDCouplingUMeshBuildQPFromEdge2((INTERP_KERNEL::NormalizedCellType)c[ci[i]],c+ci[i]+1,coords,m)),
*e2(MEDCouplingUMeshBuildQPFromEdge2((INTERP_KERNEL::NormalizedCellType)c[ci[*it]],c+ci[*it]+1,coords,m));
INTERP_KERNEL::MergePoints merge;
int sz((int)isect.size());
if(sz>1)
{
- std::map<MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node>,int> m;
+ std::map<MCAuto<INTERP_KERNEL::Node>,int> m;
INTERP_KERNEL::Edge *e(MEDCouplingUMeshBuildQPFromEdge2((INTERP_KERNEL::NormalizedCellType)c[ci[i]],c+ci[i]+1,coords,m));
e->sortSubNodesAbs(coords,isect);
e->decrRef();
}
}
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret(DataArrayInt::New()),notRet(DataArrayInt::New()); ret->alloc(nbOf2DCellsToBeSplit,1);
+ MCAuto<DataArrayInt> ret(DataArrayInt::New()),notRet(DataArrayInt::New()); ret->alloc(nbOf2DCellsToBeSplit,1);
if(nbOf2DCellsToBeSplit==0)
return ret.retn();
//
if(cells2DToTreat[i])
*retPtr++=i;
//
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> mSafe,nSafe,oSafe,pSafe,qSafe,rSafe;
+ MCAuto<DataArrayInt> mSafe,nSafe,oSafe,pSafe,qSafe,rSafe;
DataArrayInt *m(0),*n(0),*o(0),*p(0),*q(0),*r(0);
MEDCouplingUMesh::ExtractFromIndexedArrays(ret->begin(),ret->end(),desc1,descIndx1,m,n); mSafe=m; nSafe=n;
DataArrayInt::PutIntoToSkylineFrmt(intersectEdge,o,p); oSafe=o; pSafe=p;
if(middleNeedsToBeUsed)
{ DataArrayInt::PutIntoToSkylineFrmt(middle,q,r); qSafe=q; rSafe=r; }
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> modif(static_cast<MEDCouplingUMesh *>(buildPartOfMySelf(ret->begin(),ret->end(),true)));
+ MCAuto<MEDCouplingUMesh> modif(static_cast<MEDCouplingUMesh *>(buildPartOfMySelf(ret->begin(),ret->end(),true)));
int nbOfNodesCreated(modif->split2DCells(mSafe,nSafe,oSafe,pSafe,qSafe,rSafe));
setCoords(modif->getCoords());//if nbOfNodesCreated==0 modif and this have the same coordinates pointer so this line has no effect. But for quadratic cases this line is important.
setPartOfMySelf(ret->begin(),ret->end(),*modif);
{
bool areNodesMerged; int newNbOfNodes;
if(nbOfNodesCreated!=0)
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp(mergeNodes(eps,areNodesMerged,newNbOfNodes));
+ MCAuto<DataArrayInt> tmp(mergeNodes(eps,areNodesMerged,newNbOfNodes));
}
return ret.retn();
}
*/
DataArrayInt *MEDCouplingUMesh::colinearize2D(double eps)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(0,1);
- checkCoherency();
+ MCAuto<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(0,1);
+ checkConsistencyLight();
if(getSpaceDimension()!=2 || getMeshDimension()!=2)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::colinearize2D : This method only works for meshes with spaceDim=2 and meshDim=2 !");
INTERP_KERNEL::QUADRATIC_PLANAR::_arc_detection_precision=eps;
INTERP_KERNEL::QUADRATIC_PLANAR::_precision=eps;
int nbOfCells(getNumberOfCells()),nbOfNodes(getNumberOfNodes());
const int *cptr(_nodal_connec->begin()),*ciptr(_nodal_connec_index->begin());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newc(DataArrayInt::New()),newci(DataArrayInt::New()); newci->alloc(nbOfCells+1,1); newc->alloc(0,1); newci->setIJ(0,0,0);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> appendedCoords(DataArrayDouble::New()); appendedCoords->alloc(0,1);//1 not 2 it is not a bug.
+ MCAuto<DataArrayInt> newc(DataArrayInt::New()),newci(DataArrayInt::New()); newci->alloc(nbOfCells+1,1); newc->alloc(0,1); newci->setIJ(0,0,0);
+ MCAuto<DataArrayDouble> appendedCoords(DataArrayDouble::New()); appendedCoords->alloc(0,1);//1 not 2 it is not a bug.
const double *coords(_coords->begin());
int *newciptr(newci->getPointer());
for(int i=0;i<nbOfCells;i++,newciptr++,ciptr++)
if(!appendedCoords->empty())
{
appendedCoords->rearrange(2);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> newCoords(DataArrayDouble::Aggregate(getCoords(),appendedCoords));//treat info on components
+ MCAuto<DataArrayDouble> newCoords(DataArrayDouble::Aggregate(getCoords(),appendedCoords));//treat info on components
//non const part
setCoords(newCoords);
}
INTERP_KERNEL::QUADRATIC_PLANAR::_arc_detection_precision=eps;
const int *c1(m1Desc->getNodalConnectivity()->getConstPointer()),*ci1(m1Desc->getNodalConnectivityIndex()->getConstPointer());
// Build BB tree of all edges in the tool mesh (second mesh)
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> bbox1Arr(m1Desc->getBoundingBoxForBBTree()),bbox2Arr(m2Desc->getBoundingBoxForBBTree());
+ MCAuto<DataArrayDouble> bbox1Arr(m1Desc->getBoundingBoxForBBTree()),bbox2Arr(m2Desc->getBoundingBoxForBBTree());
const double *bbox1(bbox1Arr->begin()),*bbox2(bbox2Arr->begin());
int nDescCell1(m1Desc->getNumberOfCells()),nDescCell2(m2Desc->getNumberOfCells());
intersectEdge1.resize(nDescCell1);
std::set<INTERP_KERNEL::Node *> nodes;
pol1->getAllNodes(nodes); pol2->getAllNodes(nodes);
std::size_t szz(nodes.size());
- std::vector< MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node> > nodesSafe(szz);
+ std::vector< MCAuto<INTERP_KERNEL::Node> > nodesSafe(szz);
std::set<INTERP_KERNEL::Node *>::const_iterator itt(nodes.begin());
for(std::size_t iii=0;iii<szz;iii++,itt++)
{ (*itt)->incrRef(); nodesSafe[iii]=*itt; }
descIndx2=DataArrayInt::New();
revDesc2=DataArrayInt::New();
revDescIndx2=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> dd1(desc1),dd2(descIndx1),dd3(revDesc1),dd4(revDescIndx1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> dd5(desc2),dd6(descIndx2),dd7(revDesc2),dd8(revDescIndx2);
+ MCAuto<DataArrayInt> dd1(desc1),dd2(descIndx1),dd3(revDesc1),dd4(revDescIndx1);
+ MCAuto<DataArrayInt> dd5(desc2),dd6(descIndx2),dd7(revDesc2),dd8(revDescIndx2);
m1Desc=m1->buildDescendingConnectivity2(desc1,descIndx1,revDesc1,revDescIndx1);
m2Desc=m2->buildDescendingConnectivity2(desc2,descIndx2,revDesc2,revDescIndx2);
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> dd9(m1Desc),dd10(m2Desc);
+ MCAuto<MEDCouplingUMesh> dd9(m1Desc),dd10(m2Desc);
std::map<int,int> notUsedMap;
Intersect1DMeshes(m1Desc,m2Desc,eps,intersectEdge1,colinear2,subDiv2,addCoo,notUsedMap);
m1Desc->incrRef(); desc1->incrRef(); descIndx1->incrRef(); revDesc1->incrRef(); revDescIndx1->incrRef();
}
/*!
- * This method works on a pair input (\b arrIn, \b arrIndxIn) where \b arrIn indexes is in \b arrIndxIn.
+ * This method works on a pair input (\b arrIn, \b arrIndxIn) where \b arrIn indexes is in \b arrIndxIn
+ * (\ref numbering-indirect).
* This method returns the result of the extraction ( specified by a set of ids in [\b idsOfSelectBg , \b idsOfSelectEnd ) ).
* The selection of extraction is done standardly in new2old format.
- * This method returns indexed arrays using 2 arrays (arrOut,arrIndexOut).
+ * This method returns indexed arrays (\ref numbering-indirect) using 2 arrays (arrOut,arrIndexOut).
*
* \param [in] idsOfSelectBg begin of set of ids of the input extraction (included)
* \param [in] idsOfSelectEnd end of set of ids of the input extraction (excluded)
* \param [in] arrIndxIn is the input index array allowing to walk into \b arrIn
* \param [out] arrOut the resulting array
* \param [out] arrIndexOut the index array of the resulting array \b arrOut
- * \sa MEDCouplingUMesh::ExtractFromIndexedArrays2
+ * \sa MEDCouplingUMesh::ExtractFromIndexedArraysSlice
*/
void MEDCouplingUMesh::ExtractFromIndexedArrays(const int *idsOfSelectBg, const int *idsOfSelectEnd, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn,
DataArrayInt* &arrOut, DataArrayInt* &arrIndexOut)
if(nbOfGrps<0)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::ExtractFromIndexedArrays : The format of \"arrIndxIn\" is invalid ! Its nb of tuples should be >=1 !");
int maxSizeOfArr=arrIn->getNumberOfTuples();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> arro=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> arrIo=DataArrayInt::New();
+ MCAuto<DataArrayInt> arro=DataArrayInt::New();
+ MCAuto<DataArrayInt> arrIo=DataArrayInt::New();
arrIo->alloc((int)(sz+1),1);
const int *idsIt=idsOfSelectBg;
int *work=arrIo->getPointer();
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::ExtractFromIndexedArrays : id located on pos #" << i << " value is " << *idsIt << " ! Must be in [0," << nbOfGrps << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
if(lgth>=work[-1])
*work=lgth;
{
std::ostringstream oss; oss << "MEDCouplingUMesh::ExtractFromIndexedArrays : id located on pos #" << i << " value is " << *idsIt << " and at this pos arrIndxIn[" << *idsIt;
oss << "+1]-arrIndxIn[" << *idsIt << "] < 0 ! The input index array is bugged !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
arro->alloc(lgth,1);
{
std::ostringstream oss; oss << "MEDCouplingUMesh::ExtractFromIndexedArrays : id located on pos #" << i << " value is " << *idsIt << " arrIndx[" << *idsIt << "] must be >= 0 and arrIndx[";
oss << *idsIt << "+1] <= " << maxSizeOfArr << " (the size of arrIn)!";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
arrOut=arro.retn();
}
/*!
- * This method works on a pair input (\b arrIn, \b arrIndxIn) where \b arrIn indexes is in \b arrIndxIn.
+ * This method works on a pair input (\b arrIn, \b arrIndxIn) where \b arrIn indexes is in \b arrIndxIn
+ * (\ref numbering-indirect).
* This method returns the result of the extraction ( specified by a set of ids with a slice given by \a idsOfSelectStart, \a idsOfSelectStop and \a idsOfSelectStep ).
* The selection of extraction is done standardly in new2old format.
- * This method returns indexed arrays using 2 arrays (arrOut,arrIndexOut).
+ * This method returns indexed arrays (\ref numbering-indirect) using 2 arrays (arrOut,arrIndexOut).
*
- * \param [in] idsOfSelectBg begin of set of ids of the input extraction (included)
- * \param [in] idsOfSelectEnd end of set of ids of the input extraction (excluded)
+ * \param [in] idsOfSelectStart begin of set of ids of the input extraction (included)
+ * \param [in] idsOfSelectStop end of set of ids of the input extraction (excluded)
+ * \param [in] idsOfSelectStep
* \param [in] arrIn arr origin array from which the extraction will be done.
* \param [in] arrIndxIn is the input index array allowing to walk into \b arrIn
* \param [out] arrOut the resulting array
* \param [out] arrIndexOut the index array of the resulting array \b arrOut
* \sa MEDCouplingUMesh::ExtractFromIndexedArrays
*/
-void MEDCouplingUMesh::ExtractFromIndexedArrays2(int idsOfSelectStart, int idsOfSelectStop, int idsOfSelectStep, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn,
+void MEDCouplingUMesh::ExtractFromIndexedArraysSlice(int idsOfSelectStart, int idsOfSelectStop, int idsOfSelectStep, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn,
DataArrayInt* &arrOut, DataArrayInt* &arrIndexOut)
{
if(!arrIn || !arrIndxIn)
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::ExtractFromIndexedArrays2 : input pointer is NULL !");
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::ExtractFromIndexedArraysSlice : input pointer is NULL !");
arrIn->checkAllocated(); arrIndxIn->checkAllocated();
if(arrIn->getNumberOfComponents()!=1 || arrIndxIn->getNumberOfComponents()!=1)
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::ExtractFromIndexedArrays2 : input arrays must have exactly one component !");
- int sz=DataArrayInt::GetNumberOfItemGivenBESRelative(idsOfSelectStart,idsOfSelectStop,idsOfSelectStep,"MEDCouplingUMesh::ExtractFromIndexedArrays2 : Input slice ");
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::ExtractFromIndexedArraysSlice : input arrays must have exactly one component !");
+ int sz=DataArrayInt::GetNumberOfItemGivenBESRelative(idsOfSelectStart,idsOfSelectStop,idsOfSelectStep,"MEDCouplingUMesh::ExtractFromIndexedArraysSlice : Input slice ");
const int *arrInPtr=arrIn->getConstPointer();
const int *arrIndxPtr=arrIndxIn->getConstPointer();
int nbOfGrps=arrIndxIn->getNumberOfTuples()-1;
if(nbOfGrps<0)
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::ExtractFromIndexedArrays2 : The format of \"arrIndxIn\" is invalid ! Its nb of tuples should be >=1 !");
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::ExtractFromIndexedArraysSlice : The format of \"arrIndxIn\" is invalid ! Its nb of tuples should be >=1 !");
int maxSizeOfArr=arrIn->getNumberOfTuples();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> arro=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> arrIo=DataArrayInt::New();
+ MCAuto<DataArrayInt> arro=DataArrayInt::New();
+ MCAuto<DataArrayInt> arrIo=DataArrayInt::New();
arrIo->alloc((int)(sz+1),1);
int idsIt=idsOfSelectStart;
int *work=arrIo->getPointer();
lgth+=arrIndxPtr[idsIt+1]-arrIndxPtr[idsIt];
else
{
- std::ostringstream oss; oss << "MEDCouplingUMesh::ExtractFromIndexedArrays2 : id located on pos #" << i << " value is " << idsIt << " ! Must be in [0," << nbOfGrps << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ std::ostringstream oss; oss << "MEDCouplingUMesh::ExtractFromIndexedArraysSlice : id located on pos #" << i << " value is " << idsIt << " ! Must be in [0," << nbOfGrps << ") !";
+ throw INTERP_KERNEL::Exception(oss.str());
}
if(lgth>=work[-1])
*work=lgth;
else
{
- std::ostringstream oss; oss << "MEDCouplingUMesh::ExtractFromIndexedArrays2 : id located on pos #" << i << " value is " << idsIt << " and at this pos arrIndxIn[" << idsIt;
+ std::ostringstream oss; oss << "MEDCouplingUMesh::ExtractFromIndexedArraysSlice : id located on pos #" << i << " value is " << idsIt << " and at this pos arrIndxIn[" << idsIt;
oss << "+1]-arrIndxIn[" << idsIt << "] < 0 ! The input index array is bugged !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
arro->alloc(lgth,1);
work=std::copy(arrInPtr+arrIndxPtr[idsIt],arrInPtr+arrIndxPtr[idsIt+1],work);
else
{
- std::ostringstream oss; oss << "MEDCouplingUMesh::ExtractFromIndexedArrays2 : id located on pos #" << i << " value is " << idsIt << " arrIndx[" << idsIt << "] must be >= 0 and arrIndx[";
+ std::ostringstream oss; oss << "MEDCouplingUMesh::ExtractFromIndexedArraysSlice : id located on pos #" << i << " value is " << idsIt << " arrIndx[" << idsIt << "] must be >= 0 and arrIndx[";
oss << idsIt << "+1] <= " << maxSizeOfArr << " (the size of arrIn)!";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
arrOut=arro.retn();
{
if(arrIn==0 || arrIndxIn==0 || srcArr==0 || srcArrIndex==0)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::SetPartOfIndexedArrays : presence of null pointer in input parameter !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> arro=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> arrIo=DataArrayInt::New();
+ MCAuto<DataArrayInt> arro=DataArrayInt::New();
+ MCAuto<DataArrayInt> arrIo=DataArrayInt::New();
int nbOfTuples=arrIndxIn->getNumberOfTuples()-1;
std::vector<bool> v(nbOfTuples,true);
int offset=0;
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::SetPartOfIndexedArrays : On pos #" << std::distance(idsOfSelectBg,it) << " value is " << *it << " not in [0," << nbOfTuples << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
srcArrIndexPtr=srcArrIndex->getConstPointer();
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::SetPartOfIndexedArraysSameIdx : On pos #" << std::distance(idsOfSelectBg,it) << " id (idsOfSelectBg[" << std::distance(idsOfSelectBg,it)<< "]) is " << *it << " arrIndxIn[id+1]-arrIndxIn[id]!=srcArrIndex[pos+1]-srcArrIndex[pos] !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
else
{
std::ostringstream oss; oss << "MEDCouplingUMesh::SetPartOfIndexedArraysSameIdx : On pos #" << std::distance(idsOfSelectBg,it) << " value is " << *it << " not in [0," << nbOfTuples << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
}
/*!
* This method works on a pair input (\b arrIn, \b arrIndxIn) where \b arr indexes is in \b arrIndxIn.
* This method expects that these two input arrays come from the output of MEDCouplingUMesh::computeNeighborsOfCells method.
- * This method start from id 0 that will be contained in output DataArrayInt. It searches then all neighbors of id0 regarding arrIn[arrIndxIn[0]:arrIndxIn[0+1]].
+ * This method start from id 0 that will be contained in output DataArrayInt. It searches then all neighbors of id0 looking at arrIn[arrIndxIn[0]:arrIndxIn[0+1]].
* Then it is repeated recursively until either all ids are fetched or no more ids are reachable step by step.
* A negative value in \b arrIn means that it is ignored.
* This method is useful to see if a mesh is contiguous regarding its connectivity. If it is not the case the size of returned array is different from arrIndxIn->getNumberOfTuples()-1.
if(*seedElt>=0 && *seedElt<nbOfTuples)
{ fetched[*seedElt]=true; fetched2[*seedElt]=true; }
else
- { std::ostringstream oss; oss << "MEDCouplingUMesh::ComputeSpreadZoneGraduallyFromSeedAlg : At pos #" << i << " of seeds value is " << *seedElt << "! Should be in [0," << nbOfTuples << ") !"; throw INTERP_KERNEL::Exception(oss.str().c_str()); }
+ { std::ostringstream oss; oss << "MEDCouplingUMesh::ComputeSpreadZoneGraduallyFromSeedAlg : At pos #" << i << " of seeds value is " << *seedElt << "! Should be in [0," << nbOfTuples << ") !"; throw INTERP_KERNEL::Exception(oss.str()); }
}
const int *arrInPtr=arrIn->getConstPointer();
const int *arrIndxPtr=arrIndxIn->getConstPointer();
}
int lgth=(int)std::count(fetched2.begin(),fetched2.end(),true);
i=0;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(lgth,1);
+ MCAuto<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(lgth,1);
int *retPtr=ret->getPointer();
for(std::vector<bool>::const_iterator it=fetched2.begin();it!=fetched2.end();it++,i++)
if(*it)
*
* \sa MEDCouplingUMesh::SetPartOfIndexedArraysSameIdx MEDCouplingUMesh::SetPartOfIndexedArrays
*/
-void MEDCouplingUMesh::SetPartOfIndexedArrays2(int start, int end, int step, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn,
+void MEDCouplingUMesh::SetPartOfIndexedArraysSlice(int start, int end, int step, const DataArrayInt *arrIn, const DataArrayInt *arrIndxIn,
const DataArrayInt *srcArr, const DataArrayInt *srcArrIndex,
DataArrayInt* &arrOut, DataArrayInt* &arrIndexOut)
{
if(arrIn==0 || arrIndxIn==0 || srcArr==0 || srcArrIndex==0)
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::SetPartOfIndexedArrays2 : presence of null pointer in input parameter !");
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> arro=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> arrIo=DataArrayInt::New();
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::SetPartOfIndexedArraysSlice : presence of null pointer in input parameter !");
+ MCAuto<DataArrayInt> arro=DataArrayInt::New();
+ MCAuto<DataArrayInt> arrIo=DataArrayInt::New();
int nbOfTuples=arrIndxIn->getNumberOfTuples()-1;
int offset=0;
const int *arrIndxInPtr=arrIndxIn->getConstPointer();
const int *srcArrIndexPtr=srcArrIndex->getConstPointer();
- int nbOfElemsToSet=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCouplingUMesh::SetPartOfIndexedArrays2 : ");
+ int nbOfElemsToSet=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCouplingUMesh::SetPartOfIndexedArraysSlice : ");
int it=start;
for(int i=0;i<nbOfElemsToSet;i++,srcArrIndexPtr++,it+=step)
{
offset+=(srcArrIndexPtr[1]-srcArrIndexPtr[0])-(arrIndxInPtr[it+1]-arrIndxInPtr[it]);
else
{
- std::ostringstream oss; oss << "MEDCouplingUMesh::SetPartOfIndexedArrays2 : On pos #" << i << " value is " << it << " not in [0," << nbOfTuples << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ std::ostringstream oss; oss << "MEDCouplingUMesh::SetPartOfIndexedArraysSlice : On pos #" << i << " value is " << it << " not in [0," << nbOfTuples << ") !";
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
srcArrIndexPtr=srcArrIndex->getConstPointer();
* \param [in] srcArr input array that will be used as source of copy for ids in [\b idsOfSelectBg, \b idsOfSelectEnd)
* \param [in] srcArrIndex index array of \b srcArr
*
- * \sa MEDCouplingUMesh::SetPartOfIndexedArrays2 MEDCouplingUMesh::SetPartOfIndexedArraysSameIdx
+ * \sa MEDCouplingUMesh::SetPartOfIndexedArraysSlice MEDCouplingUMesh::SetPartOfIndexedArraysSameIdx
*/
-void MEDCouplingUMesh::SetPartOfIndexedArraysSameIdx2(int start, int end, int step, DataArrayInt *arrInOut, const DataArrayInt *arrIndxIn,
+void MEDCouplingUMesh::SetPartOfIndexedArraysSameIdxSlice(int start, int end, int step, DataArrayInt *arrInOut, const DataArrayInt *arrIndxIn,
const DataArrayInt *srcArr, const DataArrayInt *srcArrIndex)
{
if(arrInOut==0 || arrIndxIn==0 || srcArr==0 || srcArrIndex==0)
- throw INTERP_KERNEL::Exception("MEDCouplingUMesh::SetPartOfIndexedArraysSameIdx2 : presence of null pointer in input parameter !");
+ throw INTERP_KERNEL::Exception("MEDCouplingUMesh::SetPartOfIndexedArraysSameIdxSlice : presence of null pointer in input parameter !");
int nbOfTuples=arrIndxIn->getNumberOfTuples()-1;
const int *arrIndxInPtr=arrIndxIn->getConstPointer();
const int *srcArrIndexPtr=srcArrIndex->getConstPointer();
int *arrInOutPtr=arrInOut->getPointer();
const int *srcArrPtr=srcArr->getConstPointer();
- int nbOfElemsToSet=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCouplingUMesh::SetPartOfIndexedArraysSameIdx2 : ");
+ int nbOfElemsToSet=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCouplingUMesh::SetPartOfIndexedArraysSameIdxSlice : ");
int it=start;
for(int i=0;i<nbOfElemsToSet;i++,srcArrIndexPtr++,it+=step)
{
std::copy(srcArrPtr+srcArrIndexPtr[0],srcArrPtr+srcArrIndexPtr[1],arrInOutPtr+arrIndxInPtr[it]);
else
{
- std::ostringstream oss; oss << "MEDCouplingUMesh::SetPartOfIndexedArraysSameIdx2 : On pos #" << i << " id (idsOfSelectBg[" << i << "]) is " << it << " arrIndxIn[id+1]-arrIndxIn[id]!=srcArrIndex[pos+1]-srcArrIndex[pos] !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ std::ostringstream oss; oss << "MEDCouplingUMesh::SetPartOfIndexedArraysSameIdxSlice : On pos #" << i << " id (idsOfSelectBg[" << i << "]) is " << it << " arrIndxIn[id+1]-arrIndxIn[id]!=srcArrIndex[pos+1]-srcArrIndex[pos] !";
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
else
{
- std::ostringstream oss; oss << "MEDCouplingUMesh::SetPartOfIndexedArraysSameIdx2 : On pos #" << i << " value is " << it << " not in [0," << nbOfTuples << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
+ std::ostringstream oss; oss << "MEDCouplingUMesh::SetPartOfIndexedArraysSameIdxSlice : On pos #" << i << " value is " << it << " not in [0," << nbOfTuples << ") !";
+ throw INTERP_KERNEL::Exception(oss.str());
}
}
}
if(mdim!=spaceDim)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::buildSpreadZonesWithPoly : meshdimension and spacedimension do not match !");
std::vector<DataArrayInt *> partition=partitionBySpreadZone();
- std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > partitionAuto; partitionAuto.reserve(partition.size());
- std::copy(partition.begin(),partition.end(),std::back_insert_iterator<std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > >(partitionAuto));
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName(),mdim);
+ std::vector< MCAuto<DataArrayInt> > partitionAuto; partitionAuto.reserve(partition.size());
+ std::copy(partition.begin(),partition.end(),std::back_insert_iterator<std::vector< MCAuto<DataArrayInt> > >(partitionAuto));
+ MCAuto<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName(),mdim);
ret->setCoords(getCoords());
ret->allocateCells((int)partition.size());
//
for(std::vector<DataArrayInt *>::const_iterator it=partition.begin();it!=partition.end();it++)
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> tmp=static_cast<MEDCouplingUMesh *>(buildPartOfMySelf((*it)->begin(),(*it)->end(),true));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cell;
+ MCAuto<MEDCouplingUMesh> tmp=static_cast<MEDCouplingUMesh *>(buildPartOfMySelf((*it)->begin(),(*it)->end(),true));
+ MCAuto<DataArrayInt> cell;
switch(mdim)
{
case 2:
return ret;
DataArrayInt *neigh=0,*neighI=0;
computeNeighborsOfCells(neigh,neighI);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> neighAuto(neigh),neighIAuto(neighI);
+ MCAuto<DataArrayInt> neighAuto(neigh),neighIAuto(neighI);
std::vector<bool> fetchedCells(nbOfCellsCur,false);
- std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> > ret2;
+ std::vector< MCAuto<DataArrayInt> > ret2;
int seed=0;
while(seed<nbOfCellsCur)
{
ret2.push_back(ComputeSpreadZoneGraduallyFromSeedAlg(fetchedCells,&seed,&seed+1,neigh,neighI,-1,nbOfPeelPerformed));
seed=(int)std::distance(fetchedCells.begin(),std::find(fetchedCells.begin()+seed,fetchedCells.end(),false));
}
- for(std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayInt> >::iterator it=ret2.begin();it!=ret2.end();it++)
+ for(std::vector< MCAuto<DataArrayInt> >::iterator it=ret2.begin();it!=ret2.end();it++)
ret.push_back((*it).retn());
return ret;
}
*/
DataArrayInt *MEDCouplingUMesh::ComputeRangesFromTypeDistribution(const std::vector<int>& code)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayInt> ret=DataArrayInt::New();
std::size_t nb=code.size()/3;
if(code.size()%3!=0)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::ComputeRangesFromTypeDistribution : invalid input code !");
* more tuples (nodes) than in \a this. Anyway, all the nodes in \a this (with the same order) will be in the returned mesh.
*
* \param [in] policy - the policy of splitting that must be in (PLANAR_FACE_5, PLANAR_FACE_6, GENERAL_24, GENERAL_48). The policy will be used only for INTERP_KERNEL::NORM_HEXA8 cells.
- * For all other cells, the splitting policy will be ignored.
+ * For all other cells, the splitting policy will be ignored. See INTERP_KERNEL::SplittingPolicy for the images.
* \param [out] nbOfAdditionalPoints - number of nodes added to \c this->_coords. If > 0 a new coordinates object will be constructed result of the aggregation of the old one and the new points added.
* \param [out] n2oCells - A new instance of DataArrayInt holding, for each new cell,
* an id of old cell producing it. The caller is to delete this array using
if(getMeshDimension()!=3 || getSpaceDimension()!=3)
throw INTERP_KERNEL::Exception("MEDCouplingUMesh::tetrahedrize : only available for mesh with meshdim == 3 and spacedim == 3 !");
int nbOfCells(getNumberOfCells()),nbNodes(getNumberOfNodes());
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret0(MEDCoupling1SGTUMesh::New(getName(),INTERP_KERNEL::NORM_TETRA4));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(nbOfCells,1);
+ MCAuto<MEDCoupling1SGTUMesh> ret0(MEDCoupling1SGTUMesh::New(getName(),INTERP_KERNEL::NORM_TETRA4));
+ MCAuto<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(nbOfCells,1);
int *retPt(ret->getPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn(DataArrayInt::New()); newConn->alloc(0,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> addPts(DataArrayDouble::New()); addPts->alloc(0,1);
+ MCAuto<DataArrayInt> newConn(DataArrayInt::New()); newConn->alloc(0,1);
+ MCAuto<DataArrayDouble> addPts(DataArrayDouble::New()); addPts->alloc(0,1);
const int *oldc(_nodal_connec->begin());
const int *oldci(_nodal_connec_index->begin());
const double *coords(_coords->begin());
}
ret0->setNodalConnectivity(newConn);
//
- ret->computeOffsets2();
+ ret->computeOffsetsFull();
n2oCells=ret->buildExplicitArrOfSliceOnScaledArr(0,nbOfCells,1);
return ret0.retn();
}
void MEDCouplingUMesh::split2DCellsLinear(const DataArrayInt *desc, const DataArrayInt *descI, const DataArrayInt *subNodesInSeg, const DataArrayInt *subNodesInSegI)
{
checkConnectivityFullyDefined();
- int ncells(getNumberOfCells()),lgthToReach(getMeshLength()+subNodesInSeg->getNumberOfTuples());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c(DataArrayInt::New()); c->alloc((std::size_t)lgthToReach);
+ int ncells(getNumberOfCells()),lgthToReach(getNodalConnectivityArrayLen()+subNodesInSeg->getNumberOfTuples());
+ MCAuto<DataArrayInt> c(DataArrayInt::New()); c->alloc((std::size_t)lgthToReach);
const int *subPtr(subNodesInSeg->begin()),*subIPtr(subNodesInSegI->begin()),*descPtr(desc->begin()),*descIPtr(descI->begin()),*oldConn(getNodalConnectivity()->begin());
int *cPtr(c->getPointer()),*ciPtr(getNodalConnectivityIndex()->getPointer());
int prevPosOfCi(ciPtr[0]);
}
}
+int InternalAddPointOriented(const INTERP_KERNEL::Edge *e, int id, const double *coo, int startId, int endId, DataArrayDouble& addCoo, int& nodesCnter)
+{
+ if(id!=-1)
+ return id;
+ else
+ {
+ int ret(nodesCnter++);
+ double newPt[2];
+ e->getMiddleOfPointsOriented(coo+2*startId,coo+2*endId,newPt);
+ addCoo.insertAtTheEnd(newPt,newPt+2);
+ return ret;
+ }
+}
+
+
/// @cond INTERNAL
void EnterTheResultOf2DCellFirst(const INTERP_KERNEL::Edge *e, int start, int stp, int nbOfEdges, bool linOrArc, const double *coords, const int *connBg, int offset, DataArrayInt *newConnOfCell, DataArrayDouble *appendedCoords, std::vector<int>& middles)
if(stp-start>1)
{
int tmp2(0),tmp3(appendedCoords->getNumberOfTuples()/2);
- InternalAddPoint(e,-1,coords,tmp[1],tmp[2],*appendedCoords,tmp2);
+ InternalAddPointOriented(e,-1,coords,tmp[1],tmp[2],*appendedCoords,tmp2);
middles.push_back(tmp3+offset);
}
else
if(stp-start>1)
{
int tmp2(0),tmp3(appendedCoords->getNumberOfTuples()/2);
- InternalAddPoint(e,-1,coords,tmpSrt,tmpEnd,*appendedCoords,tmp2);
+ InternalAddPointOriented(e,-1,coords,tmpSrt,tmpEnd,*appendedCoords,tmp2);
middles.push_back(tmp3+offset);
}
else
void EnterTheResultOf2DCellEnd(const INTERP_KERNEL::Edge *e, int start, int stp, int nbOfEdges, bool linOrArc, const double *coords, const int *connBg, int offset, DataArrayInt *newConnOfCell, DataArrayDouble *appendedCoords, std::vector<int>& middles)
{
+ // only the quadratic point to deal with:
if(linOrArc)
{
if(stp-start>1)
{
int tmpSrt(connBg[start]),tmpEnd(connBg[stp]);
int tmp2(0),tmp3(appendedCoords->getNumberOfTuples()/2);
- InternalAddPoint(e,-1,coords,tmpSrt,tmpEnd,*appendedCoords,tmp2);
+ InternalAddPointOriented(e,-1,coords,tmpSrt,tmpEnd,*appendedCoords,tmp2);
middles.push_back(tmp3+offset);
}
else
}
}
-/// @cond INTERNAL
+/// @endcond
/*!
* Returns true if a colinearization has been found in the given cell. If false is returned the content pushed in \a newConnOfCell is equal to [ \a connBg , \a connEnd ) .
sz--;
INTERP_KERNEL::AutoPtr<int> tmpConn(new int[sz]);
const INTERP_KERNEL::CellModel& cm(INTERP_KERNEL::CellModel::GetCellModel((INTERP_KERNEL::NormalizedCellType)connBg[0]));
- unsigned nbs(cm.getNumberOfSons2(connBg+1,sz)),nbOfHit(0);
+ unsigned nbs(cm.getNumberOfSons2(connBg+1,sz));
+ unsigned nbOfHit(0); // number of fusions operated
int posBaseElt(0),posEndElt(0),nbOfTurn(0);
+ const unsigned int maxNbOfHit = cm.isQuadratic() ? nbs-2 : nbs-3; // a quad cell is authorized to end up with only two edges, a linear one has to keep 3 at least
INTERP_KERNEL::NormalizedCellType typeOfSon;
std::vector<int> middles;
bool ret(false);
- for(;nbOfHit<nbs;nbOfTurn++)
+ for(;(nbOfTurn+nbOfHit)<nbs;nbOfTurn++)
{
cm.fillSonCellNodalConnectivity2(posBaseElt,connBg+1,sz,tmpConn,typeOfSon);
- std::map<MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Node>,int> m;
+ std::map<MCAuto<INTERP_KERNEL::Node>,int> m;
INTERP_KERNEL::Edge *e(MEDCouplingUMeshBuildQPFromEdge2(typeOfSon,tmpConn,coords,m));
- posEndElt++;
- nbOfHit++;
- unsigned endI(nbs-nbOfHit);
- for(unsigned i=0;i<endI;i++)
+ posEndElt = posBaseElt+1;
+
+ // Look backward first: are the final edges of the cells colinear with the first ones?
+ // This initializes posBaseElt.
+ if(nbOfTurn==0)
+ {
+ for(unsigned i=1;i<nbs && nbOfHit<maxNbOfHit;i++) // 2nd condition is to avoid ending with a cell wih one single edge
+ {
+ cm.fillSonCellNodalConnectivity2(nbs-i,connBg+1,sz,tmpConn,typeOfSon);
+ INTERP_KERNEL::Edge *eCand(MEDCouplingUMeshBuildQPFromEdge2(typeOfSon,tmpConn,coords,m));
+ INTERP_KERNEL::EdgeIntersector *eint(INTERP_KERNEL::Edge::BuildIntersectorWith(e,eCand));
+ bool isColinear=eint->areColinears();
+ if(isColinear)
+ {
+ nbOfHit++;
+ posBaseElt--;
+ ret=true;
+ }
+ delete eint;
+ eCand->decrRef();
+ if(!isColinear)
+ break;
+ }
+ }
+ // Now move forward:
+ const unsigned fwdStart = (nbOfTurn == 0 ? 0 : posBaseElt); // the first element to be inspected going forward
+ for(unsigned j=fwdStart+1;j<nbs && nbOfHit<maxNbOfHit;j++) // 2nd condition is to avoid ending with a cell wih one single edge
{
- cm.fillSonCellNodalConnectivity2(posBaseElt+(int)i+1,connBg+1,sz,tmpConn,typeOfSon);
+ cm.fillSonCellNodalConnectivity2((int)j,connBg+1,sz,tmpConn,typeOfSon); // get edge #j's connectivity
INTERP_KERNEL::Edge *eCand(MEDCouplingUMeshBuildQPFromEdge2(typeOfSon,tmpConn,coords,m));
INTERP_KERNEL::EdgeIntersector *eint(INTERP_KERNEL::Edge::BuildIntersectorWith(e,eCand));
bool isColinear(eint->areColinears());
delete eint;
eCand->decrRef();
if(!isColinear)
- {
- if(nbOfTurn==0)
- {//look if the first edge of cell is not colinear with last edges in this case the start of nodal connectivity is shifted back
- unsigned endII(nbs-nbOfHit-1);//warning nbOfHit can be modified, so put end condition in a variable.
- for(unsigned ii=0;ii<endII;ii++)
- {
- cm.fillSonCellNodalConnectivity2(nbs-ii-1,connBg+1,sz,tmpConn,typeOfSon);
- eCand=MEDCouplingUMeshBuildQPFromEdge2(typeOfSon,tmpConn,coords,m);
- eint=INTERP_KERNEL::Edge::BuildIntersectorWith(e,eCand);
- isColinear=eint->areColinears();
- if(isColinear)
- {
- nbOfHit++;
- posBaseElt--;
- ret=true;
- }
- delete eint;
- eCand->decrRef();
- if(!isColinear)
- break;
- }
- }
break;
- }
}
//push [posBaseElt,posEndElt) in newConnOfCell using e
+ // The if clauses below are (volontary) not mutually exclusive: on a quad cell with 2 edges, the end of the connectivity is also its begining!
if(nbOfTurn==0)
+ // at the begining of the connectivity (insert type)
EnterTheResultOf2DCellFirst(e,posBaseElt,posEndElt,(int)nbs,cm.isQuadratic(),coords,connBg+1,offset,newConnOfCell,appendedCoords,middles);
- else if(nbOfHit!=nbs)
+ else if((nbOfHit+nbOfTurn) != (nbs-1))
+ // in the middle
EnterTheResultOf2DCellMiddle(e,posBaseElt,posEndElt,(int)nbs,cm.isQuadratic(),coords,connBg+1,offset,newConnOfCell,appendedCoords,middles);
- else
+ if ((nbOfHit+nbOfTurn) == (nbs-1))
+ // at the end (only quad points to deal with)
EnterTheResultOf2DCellEnd(e,posBaseElt,posEndElt,(int)nbs,cm.isQuadratic(),coords,connBg+1,offset,newConnOfCell,appendedCoords,middles);
posBaseElt=posEndElt;
e->decrRef();
*/
int MEDCouplingUMesh::split2DCellsQuadratic(const DataArrayInt *desc, const DataArrayInt *descI, const DataArrayInt *subNodesInSeg, const DataArrayInt *subNodesInSegI, const DataArrayInt *mid, const DataArrayInt *midI)
{
- checkCoherency();
- int ncells(getNumberOfCells()),lgthToReach(getMeshLength()+2*subNodesInSeg->getNumberOfTuples()),nodesCnt(getNumberOfNodes());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c(DataArrayInt::New()); c->alloc((std::size_t)lgthToReach);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> addCoo(DataArrayDouble::New()); addCoo->alloc(0,1);
+ checkConsistencyLight();
+ int ncells(getNumberOfCells()),lgthToReach(getNodalConnectivityArrayLen()+2*subNodesInSeg->getNumberOfTuples()),nodesCnt(getNumberOfNodes());
+ MCAuto<DataArrayInt> c(DataArrayInt::New()); c->alloc((std::size_t)lgthToReach);
+ MCAuto<DataArrayDouble> addCoo(DataArrayDouble::New()); addCoo->alloc(0,1);
const int *subPtr(subNodesInSeg->begin()),*subIPtr(subNodesInSegI->begin()),*descPtr(desc->begin()),*descIPtr(descI->begin()),*oldConn(getNodalConnectivity()->begin());
const int *midPtr(mid->begin()),*midIPtr(midI->begin());
const double *oldCoordsPtr(getCoords()->begin());
ns[0]=new INTERP_KERNEL::Node(oldCoordsPtr[2*oldConn[prevPosOfCi+1+j]],oldCoordsPtr[2*oldConn[prevPosOfCi+1+j]+1]);
ns[1]=new INTERP_KERNEL::Node(oldCoordsPtr[2*oldConn[prevPosOfCi+1+(1+j)%sz]],oldCoordsPtr[2*oldConn[prevPosOfCi+1+(1+j)%sz]+1]);
ns[2]=new INTERP_KERNEL::Node(oldCoordsPtr[2*oldConn[prevPosOfCi+1+sz+j]],oldCoordsPtr[2*oldConn[prevPosOfCi+1+sz+j]+1]);
- MEDCouplingAutoRefCountObjectPtr<INTERP_KERNEL::Edge> e(INTERP_KERNEL::QuadraticPolygon::BuildArcCircleEdge(ns));
+ MCAuto<INTERP_KERNEL::Edge> e(INTERP_KERNEL::QuadraticPolygon::BuildArcCircleEdge(ns));
for(int k=0;k<sz2;k++)//loop over subsplit of current subedge
{
cPtr[1]=subPtr[offset2+k];
_nodal_connec->decrRef();
_nodal_connec=c.retn(); _types.clear(); _types.insert(INTERP_KERNEL::NORM_QPOLYG);
addCoo->rearrange(2);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coo(DataArrayDouble::Aggregate(getCoords(),addCoo));//info are copied from getCoords() by using Aggregate
+ MCAuto<DataArrayDouble> coo(DataArrayDouble::Aggregate(getCoords(),addCoo));//info are copied from getCoords() by using Aggregate
setCoords(coo);
return addCoo->getNumberOfTuples();
}
+void MEDCouplingUMesh::ComputeAllTypesInternal(std::set<INTERP_KERNEL::NormalizedCellType>& types, const DataArrayInt *nodalConnec, const DataArrayInt *nodalConnecIndex)
+{
+ if(nodalConnec && nodalConnecIndex)
+ {
+ types.clear();
+ const int *conn(nodalConnec->getConstPointer()),*connIndex(nodalConnecIndex->getConstPointer());
+ int nbOfElem(nodalConnecIndex->getNbOfElems()-1);
+ if(nbOfElem>0)
+ for(const int *pt=connIndex;pt!=connIndex+nbOfElem;pt++)
+ types.insert((INTERP_KERNEL::NormalizedCellType)conn[*pt]);
+ }
+}
+
MEDCouplingUMeshCellIterator::MEDCouplingUMeshCellIterator(MEDCouplingUMesh *mesh):_mesh(mesh),_cell(new MEDCouplingUMeshCell(mesh)),
_own_cell(true),_cell_id(-1),_nb_cell(0)
{
if(_cell_id<_nb_cell)
{
INTERP_KERNEL::NormalizedCellType type=(INTERP_KERNEL::NormalizedCellType)c[ci[_cell_id]];
- int nbOfElems=(int)std::distance(ci+_cell_id,std::find_if(ci+_cell_id,ci+_nb_cell,ParaMEDMEMImpl::ConnReader(c,type)));
+ int nbOfElems=(int)std::distance(ci+_cell_id,std::find_if(ci+_cell_id,ci+_nb_cell,MEDCouplingImpl::ConnReader(c,type)));
int startId=_cell_id;
_cell_id+=nbOfElems;
return new MEDCouplingUMeshCellEntry(_mesh,type,_cell,startId,_cell_id);
