Updated copyright comment

[tools/medcoupling.git] / src / MEDCoupling / MEDCouplingMultiFields.cxx

diff --git a/src/MEDCoupling/MEDCouplingMultiFields.cxx b/src/MEDCoupling/MEDCouplingMultiFields.cxx
index 5fe85bf7a19bc744d350625825065f05eae84f49..366f106d9c58f02a51afed2c9ff178a2f77bf470 100644 (file)
--- a/src/MEDCoupling/MEDCouplingMultiFields.cxx
+++ b/src/MEDCoupling/MEDCouplingMultiFields.cxx
@@ -1,9 +1,9 @@
-// Copyright (C) 2007-2013  CEA/DEN, EDF R&D
+// Copyright (C) 2007-2024  CEA, EDF
 //
 // This library is free software; you can redistribute it and/or
 // modify it under the terms of the GNU Lesser General Public
 // License as published by the Free Software Foundation; either
-// version 2.1 of the License.
+// version 2.1 of the License, or (at your option) any later version.
 //
 // This library is distributed in the hope that it will be useful,
 // but WITHOUT ANY WARRANTY; without even the implied warranty of
@@ -22,12 +22,12 @@
 #include "MEDCouplingFieldTemplate.hxx"
 #include "MEDCouplingFieldDouble.hxx"
 #include "MEDCouplingMesh.hxx"
-#include "MEDCouplingAutoRefCountObjectPtr.hxx"
+#include "MCAuto.hxx"
 
 #include <sstream>
 #include <algorithm>
 
-using namespace ParaMEDMEM;
+using namespace MEDCoupling;
 
 MEDCouplingMultiFields *MEDCouplingMultiFields::New(const std::vector<MEDCouplingFieldDouble *>& fs)
 {
@@ -39,7 +39,7 @@ MEDCouplingMultiFields *MEDCouplingMultiFields::New()
   return new MEDCouplingMultiFields;
 }
 
-MEDCouplingMultiFields *MEDCouplingMultiFields::deepCpy() const
+MEDCouplingMultiFields *MEDCouplingMultiFields::deepCopy() const
 {
   return new MEDCouplingMultiFields(*this);
 }
@@ -80,7 +80,7 @@ bool MEDCouplingMultiFields::isEqual(const MEDCouplingMultiFields *other, double
 
 std::string MEDCouplingMultiFields::getName() const
 {
-  std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
+  std::vector< MCAuto<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
   for(;it!=_fs.end();it++)
     if((const MEDCouplingFieldDouble *)(*it))
       return (*it)->getName();
@@ -89,7 +89,7 @@ std::string MEDCouplingMultiFields::getName() const
 
 std::string MEDCouplingMultiFields::getDescription() const
 {
-  std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
+  std::vector< MCAuto<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
   for(;it!=_fs.end();it++)
     if((const MEDCouplingFieldDouble *)(*it))
       return (*it)->getDescription();
@@ -98,7 +98,7 @@ std::string MEDCouplingMultiFields::getDescription() const
 
 std::string MEDCouplingMultiFields::getTimeUnit() const
 {
-  std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
+  std::vector< MCAuto<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
   for(;it!=_fs.end();it++)
     if((const MEDCouplingFieldDouble *)(*it))
       return (*it)->getTimeUnit();
@@ -107,7 +107,7 @@ std::string MEDCouplingMultiFields::getTimeUnit() const
 
 double MEDCouplingMultiFields::getTimeResolution() const
 {
-  std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
+  std::vector< MCAuto<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
   for(;it!=_fs.end();it++)
     if((const MEDCouplingFieldDouble *)(*it))
       return (*it)->getTimeTolerance();
@@ -124,12 +124,12 @@ std::string MEDCouplingMultiFields::simpleRepr() const
   std::vector<MEDCouplingMesh *> ms;
   std::vector<int> refms;
   try
-    {
+  {
       ms=getDifferentMeshes(refms);
       ret << ms.size() << "\n";
-    }
+  }
   catch(INTERP_KERNEL::Exception& /*e*/)
-    { ret << "Current instance is INVALID !\n"; }
+  { ret << "Current instance is INVALID !\n"; }
   return ret.str();
 }
 
@@ -151,7 +151,7 @@ bool MEDCouplingMultiFields::isEqualWithoutConsideringStr(const MEDCouplingMulti
 
 const MEDCouplingFieldDouble *MEDCouplingMultiFields::getFieldWithId(int id) const
 {
-  if(id>=(int)_fs.size() || id < 0)
+  if(id>=ToIdType(_fs.size()) || id < 0)
     throw INTERP_KERNEL::Exception("MEDCouplingMultiFields::getFieldWithId : invalid id outside boundaries !");
   return _fs[id];
 }
@@ -170,7 +170,7 @@ int MEDCouplingMultiFields::getNumberOfFields() const
 
 const MEDCouplingFieldDouble *MEDCouplingMultiFields::getFieldAtPos(int id) const
 {
-  if(id<0 || id>=(int)_fs.size())
+  if(id<0 || id>=ToIdType(_fs.size()))
     {
       std::ostringstream oss; oss << "MEDCouplingMultiFields::getFieldAtPos : Invalid given pos : should be >=0 and < " << _fs.size() << " !";
       throw INTERP_KERNEL::Exception(oss.str().c_str());
@@ -180,7 +180,7 @@ const MEDCouplingFieldDouble *MEDCouplingMultiFields::getFieldAtPos(int id) cons
 
 void MEDCouplingMultiFields::updateTime() const
 {
-  std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
+  std::vector< MCAuto<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
   for(;it!=_fs.end();it++)
     if((const MEDCouplingFieldDouble *)(*it))
       (*it)->updateTime();
@@ -195,22 +195,18 @@ std::size_t MEDCouplingMultiFields::getHeapMemorySizeWithoutChildren() const
   return 0;
 }
 
-std::vector<const BigMemoryObject *> MEDCouplingMultiFields::getDirectChildren() const
+std::vector<const BigMemoryObject *> MEDCouplingMultiFields::getDirectChildrenWithNull() const
 {
   std::vector<const BigMemoryObject *> ret;
-  for(std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();it!=_fs.end();it++)
-    {
-      const MEDCouplingFieldDouble *curF(*it);
-      if(curF)
-        ret.push_back(curF);
-    }
+  for(std::vector< MCAuto<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();it!=_fs.end();it++)
+    ret.push_back((const MEDCouplingFieldDouble *)*it);
   return ret;
 }
 
 std::vector<MEDCouplingMesh *> MEDCouplingMultiFields::getMeshes() const
 {
   std::vector<MEDCouplingMesh *> ms;
-  for(std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();it!=_fs.end();it++)
+  for(std::vector< MCAuto<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();it!=_fs.end();it++)
     {
       const MEDCouplingMesh *m=0;
       if((const MEDCouplingFieldDouble *)(*it))
@@ -225,7 +221,7 @@ std::vector<MEDCouplingMesh *> MEDCouplingMultiFields::getDifferentMeshes(std::v
   refs.resize(_fs.size());
   std::vector<MEDCouplingMesh *> ms;
   int id=0;
-  for(std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();it!=_fs.end();it++,id++)
+  for(std::vector< MCAuto<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();it!=_fs.end();it++,id++)
     {
       const MEDCouplingMesh *m=0;
       if((const MEDCouplingFieldDouble *)(*it))
@@ -250,7 +246,7 @@ std::vector<MEDCouplingMesh *> MEDCouplingMultiFields::getDifferentMeshes(std::v
 std::vector<DataArrayDouble *> MEDCouplingMultiFields::getArrays() const
 {
   std::vector<DataArrayDouble *> tmp;
-  for(std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();it!=_fs.end();it++)
+  for(std::vector< MCAuto<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();it!=_fs.end();it++)
     {
       std::vector<DataArrayDouble *> tmp2=(*it)->getArrays();
       tmp.insert(tmp.end(),tmp2.begin(),tmp2.end());
@@ -263,7 +259,7 @@ std::vector<DataArrayDouble *> MEDCouplingMultiFields::getDifferentArrays(std::v
   refs.resize(_fs.size());
   int id=0;
   std::vector<DataArrayDouble *> ret;
-  for(std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();it!=_fs.end();it++,id++)
+  for(std::vector< MCAuto<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();it!=_fs.end();it++,id++)
     {
       std::vector<DataArrayDouble *> tmp2;
       if((const MEDCouplingFieldDouble *)(*it))
@@ -294,14 +290,14 @@ std::vector<DataArrayDouble *> MEDCouplingMultiFields::getDifferentArrays(std::v
   return ret;
 }
 
-void MEDCouplingMultiFields::checkCoherency() const
+void MEDCouplingMultiFields::checkConsistencyLight() const
 {
-  std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
+  std::vector< MCAuto<MEDCouplingFieldDouble> >::const_iterator it=_fs.begin();
   for(;it!=_fs.end();it++)
     {
       if((const MEDCouplingFieldDouble *)(*it)==0)
-        throw INTERP_KERNEL::Exception("MEDCouplingMultiFields::checkCoherency : There is an empty Field in array...");
-      (*it)->checkCoherency();
+        throw INTERP_KERNEL::Exception("MEDCouplingMultiFields::checkConsistencyLight : There is an empty Field in array...");
+      (*it)->checkConsistencyLight();
     }
 }
 
@@ -314,16 +310,16 @@ MEDCouplingMultiFields::MEDCouplingMultiFields(const std::vector<MEDCouplingFiel
         (*it)->incrRef();
       else
         throw INTERP_KERNEL::Exception("MEDCouplingMultiFields constructor : empty field found in vector !");
-      (*it)->checkCoherency();
+      (*it)->checkConsistencyLight();
       _fs[id]=*it;
     }
 }
 
 
 /*!
- * Performs deepCpy.
+ * Performs deepCopy.
  */
-MEDCouplingMultiFields::MEDCouplingMultiFields(const MEDCouplingMultiFields& other)
+MEDCouplingMultiFields::MEDCouplingMultiFields(const MEDCouplingMultiFields& other):RefCountObject(other)
 {
   std::size_t sz=other._fs.size();
   _fs.resize(sz);
@@ -331,14 +327,14 @@ MEDCouplingMultiFields::MEDCouplingMultiFields(const MEDCouplingMultiFields& oth
   std::vector< std::vector<int> > refs2;
   std::vector<MEDCouplingMesh *> ms=other.getDifferentMeshes(refs);
   std::size_t msLgh=ms.size();
-  std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCouplingMesh> > ms2(msLgh);
+  std::vector< MCAuto<MEDCouplingMesh> > ms2(msLgh);
   for(std::size_t i=0;i<msLgh;i++)
-    ms2[i]=ms[i]->deepCpy();
+    ms2[i]=ms[i]->deepCopy();
   std::vector<DataArrayDouble *> das=other.getDifferentArrays(refs2);
   std::size_t dasLgth=das.size();
-  std::vector< MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> > das2(dasLgth);
+  std::vector< MCAuto<DataArrayDouble> > das2(dasLgth);
   for(std::size_t i=0;i<dasLgth;i++)
-    das2[i]=das[i]->deepCpy();
+    das2[i]=das[i]->deepCopy();
   for(std::size_t i=0;i<sz;i++)
     {
       if((const MEDCouplingFieldDouble *)other._fs[i])
@@ -358,7 +354,7 @@ MEDCouplingMultiFields::MEDCouplingMultiFields(const MEDCouplingMultiFields& oth
                 tmp2[j]=0;
             }
           _fs[i]->setArrays(tmp2);
-          std::vector<int> tinyInfo;
+          std::vector<mcIdType> tinyInfo;
           std::vector<double> tinyInfo2;
           other._fs[i]->getTimeDiscretizationUnderGround()->getTinySerializationIntInformation2(tinyInfo);
           other._fs[i]->getTimeDiscretizationUnderGround()->getTinySerializationDbleInformation2(tinyInfo2);
@@ -371,7 +367,7 @@ MEDCouplingMultiFields::MEDCouplingMultiFields()
 {
 }
 
-void MEDCouplingMultiFields::getTinySerializationInformation(std::vector<int>& tinyInfo, std::vector<double>& tinyInfo2, int& nbOfDiffMeshes, int& nbOfDiffArr) const
+void MEDCouplingMultiFields::getTinySerializationInformation(std::vector<mcIdType>& tinyInfo, std::vector<double>& tinyInfo2, int& nbOfDiffMeshes, int& nbOfDiffArr) const
 {
   std::vector<int> refs;
   std::vector<MEDCouplingMesh *> ms=getDifferentMeshes(refs);
@@ -380,70 +376,70 @@ void MEDCouplingMultiFields::getTinySerializationInformation(std::vector<int>& t
   std::vector<DataArrayDouble *> fs=getDifferentArrays(refs2);
   nbOfDiffArr=(int)fs.size();
   //
-  std::size_t sz=refs.size();//==_fs.size()
-  int sz2=0;
-  for(std::size_t i=0;i<sz;i++)
-    sz2+=(int)refs2[i].size();
+  mcIdType sz=ToIdType(refs.size());//==_fs.size()
+  mcIdType sz2=0;
+  for(mcIdType i=0;i<sz;i++)
+    sz2+=ToIdType(refs2[i].size());
   //
   tinyInfo2.clear();
   std::vector<int> doubleDaInd(sz);
   std::vector<int> timeDiscrInt;
   tinyInfo.resize(sz2+5*sz+3);
-  tinyInfo[0]=(int)sz;
+  tinyInfo[0]=sz;
   tinyInfo[1]=sz2;
-  for(std::size_t i=0;i<sz;i++)
+  for(mcIdType i=0;i<sz;i++)
     {
       std::vector<double> tmp;
-      std::vector<int> tmp2;
+      std::vector<mcIdType> tmp2;
       _fs[i]->getTimeDiscretizationUnderGround()->getTinySerializationDbleInformation2(tmp);
       _fs[i]->getTimeDiscretizationUnderGround()->getTinySerializationIntInformation2(tmp2);
-      tinyInfo[3*sz+3+i]=(int)tmp.size();
-      tinyInfo[4*sz+3+i]=(int)tmp2.size();
+      tinyInfo[3*sz+3+i]=ToIdType(tmp.size());
+      tinyInfo[4*sz+3+i]=ToIdType(tmp2.size());
       tinyInfo2.insert(tinyInfo2.end(),tmp.begin(),tmp.end());
       timeDiscrInt.insert(timeDiscrInt.end(),tmp2.begin(),tmp2.end());
     }
-  int sz3=(int)timeDiscrInt.size();
+  mcIdType sz3=ToIdType(timeDiscrInt.size());
   tinyInfo[2]=sz3;
   //
-  for(std::size_t i=0;i<sz;i++)
+  for(mcIdType i=0;i<sz;i++)
     tinyInfo[i+3]=refs[i];
-  for(std::size_t i=0;i<sz;i++)
-    tinyInfo[i+sz+3]=(int)refs2[i].size();
-  for(std::size_t i=0;i<sz;i++)
-    tinyInfo[i+2*sz+3]=(int)_fs[i]->getTimeDiscretization();
+  for(mcIdType i=0;i<sz;i++)
+    tinyInfo[i+sz+3]=ToIdType(refs2[i].size());
+  for(mcIdType i=0;i<sz;i++)
+    tinyInfo[i+2*sz+3]=ToIdType(_fs[i]->getTimeDiscretization());
   int k=0;
-  for(std::size_t i=0;i<sz;i++)
+  for(mcIdType i=0;i<sz;i++)
     for(std::vector<int>::const_iterator it=refs2[i].begin();it!=refs2[i].end();it++,k++)
       tinyInfo[5*sz+k+3]=*it;
   tinyInfo.insert(tinyInfo.end(),timeDiscrInt.begin(),timeDiscrInt.end());//tinyInfo has lgth==sz3+sz2+5*sz+3
 }
 
-void MEDCouplingMultiFields::finishUnserialization(const std::vector<int>& tinyInfoI, const std::vector<double>& tinyInfoD,
+void MEDCouplingMultiFields::finishUnserialization(const std::vector<mcIdType>& tinyInfoI, const std::vector<double>& tinyInfoD,
                                                    const std::vector<MEDCouplingFieldTemplate *>& ft, const std::vector<MEDCouplingMesh *>& ms,
                                                    const std::vector<DataArrayDouble *>& das)
 {
-  int sz=tinyInfoI[0];
+  mcIdType sz=tinyInfoI[0];
   _fs.resize(sz);
-  int sz2=tinyInfoI[1];
+  mcIdType sz2=tinyInfoI[1];
   // dealing with ft with no mesh set.
-  for(int i=0;i<sz;i++)
+  for(mcIdType i=0;i<sz;i++)
     {
-      int meshId=tinyInfoI[3+i];
+      mcIdType meshId=tinyInfoI[3+i];
       if(meshId!=-1)
         ft[i]->setMesh(ms[meshId]);
     }
   // dealing with fieldtemplate->fielddouble
-  int k=0;
-  int offI=0;
-  int offD=0;
-  for(int i=0;i<sz;i++)
+  mcIdType k=0;
+  mcIdType offI=0;
+  mcIdType offD=0;
+  for(mcIdType i=0;i<sz;i++)
     {
       _fs[i]=MEDCouplingFieldDouble::New(*ft[i],(TypeOfTimeDiscretization)tinyInfoI[2*sz+3+i]);
-      int sz3=tinyInfoI[sz+i+3];
+      mcIdType sz3=tinyInfoI[sz+i+3];
       std::vector<DataArrayDouble *> tmp(sz3);
-      for(int j=0;j<sz3;j++,k++)
+      for(mcIdType j=0;j<sz3;j++,k++)
         {
-          int daId=tinyInfoI[5*sz+k+3];
+          mcIdType daId=tinyInfoI[5*sz+k+3];
           if(daId!=-1)
             tmp[j]=das[daId];
           else
@@ -451,10 +447,10 @@ void MEDCouplingMultiFields::finishUnserialization(const std::vector<int>& tinyI
         }
       _fs[i]->setArrays(tmp);
       // time discr tiny info
-      int lgthI=tinyInfoI[4*sz+3+i];
-      int lgthD=tinyInfoI[3*sz+3+i];
+      mcIdType lgthI=tinyInfoI[4*sz+3+i];
+      mcIdType lgthD=tinyInfoI[3*sz+3+i];
       //
-      std::vector<int> tdInfoI(tinyInfoI.begin()+sz2+5*sz+3+offI,tinyInfoI.begin()+sz2+5*sz+3+offI+lgthI);
+      std::vector<mcIdType> tdInfoI(tinyInfoI.begin()+sz2+5*sz+3+offI,tinyInfoI.begin()+sz2+5*sz+3+offI+lgthI);
       std::vector<double> tdInfoD(tinyInfoD.begin()+offD,tinyInfoD.begin()+offD+lgthD);
       _fs[i]->getTimeDiscretizationUnderGround()->finishUnserialization2(tdInfoI,tdInfoD);
       //