-// Copyright (C) 2007-2014 CEA/DEN, EDF R&D
+// Copyright (C) 2007-2021 CEA/DEN, EDF R&D
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
//
// See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
//
-// Author : Anthony Geay (CEA/DEN)
+// Author : Anthony Geay (EDF R&D)
-#include "MEDCoupling1GTUMesh.hxx"
+#include "MEDCoupling1GTUMesh.txx"
#include "MEDCouplingUMesh.hxx"
#include "MEDCouplingFieldDouble.hxx"
#include "MEDCouplingCMesh.hxx"
#include "SplitterTetra.hxx"
+#include "DiameterCalculator.hxx"
+#include "OrientationInverter.hxx"
+#include "InterpKernelAutoPtr.hxx"
-using namespace ParaMEDMEM;
+using namespace MEDCoupling;
const int MEDCoupling1SGTUMesh::HEXA8_FACE_PAIRS[6]={0,1,2,4,3,5};
* \param [in] type the geometric type
* \return cell ids in this having geometric type \a type.
*/
-DataArrayInt *MEDCoupling1GTUMesh::giveCellsWithType(INTERP_KERNEL::NormalizedCellType type) const
+DataArrayIdType *MEDCoupling1GTUMesh::giveCellsWithType(INTERP_KERNEL::NormalizedCellType type) const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New();
if(type==getCellModelEnum())
ret->alloc(getNumberOfCells(),1);
else
/*!
* Returns nb of cells having the geometric type \a type. No throw if no cells in \a this has the geometric type \a type.
*/
-int MEDCoupling1GTUMesh::getNumberOfCellsWithType(INTERP_KERNEL::NormalizedCellType type) const
+mcIdType MEDCoupling1GTUMesh::getNumberOfCellsWithType(INTERP_KERNEL::NormalizedCellType type) const
{
return type==getCellModelEnum()?getNumberOfCells():0;
}
* \return INTERP_KERNEL::NormalizedCellType - enumeration item describing the cell type.
* \throw If \a cellId is invalid. Valid range is [0, \a this->getNumberOfCells() ).
*/
-INTERP_KERNEL::NormalizedCellType MEDCoupling1GTUMesh::getTypeOfCell(int cellId) const
+INTERP_KERNEL::NormalizedCellType MEDCoupling1GTUMesh::getTypeOfCell(mcIdType cellId) const
{
- if(cellId>=0 && cellId<getNumberOfCells())
+ if(cellId<getNumberOfCells())
return getCellModelEnum();
std::ostringstream oss; oss << "MEDCoupling1GTUMesh::getTypeOfCell : Requesting type of cell #" << cellId << " but it should be in [0," << getNumberOfCells() << ") !";
throw INTERP_KERNEL::Exception(oss.str().c_str());
* \a this is composed in cell types.
* The returned array is of size 3*n where n is the number of different types present in \a this.
* For every k in [0,n] ret[3*k+2]==-1 because it has no sense here.
- * This parameter is kept only for compatibility with other methode listed above.
+ * This parameter is kept only for compatibility with other method listed above.
*/
-std::vector<int> MEDCoupling1GTUMesh::getDistributionOfTypes() const
+std::vector<mcIdType> MEDCoupling1GTUMesh::getDistributionOfTypes() const
{
- std::vector<int> ret(3);
- ret[0]=(int)getCellModelEnum(); ret[1]=getNumberOfCells(); ret[2]=-1;
+ std::vector<mcIdType> ret(3);
+ ret[0]=ToIdType(getCellModelEnum()); ret[1]=getNumberOfCells(); ret[2]=-1;
return ret;
}
* - After \a code contains [NORM_...,nbCells,0], \a idsInPflPerType [[0,1]] and \a idsPerType is [[1,2]] <br>
*/
-void MEDCoupling1GTUMesh::splitProfilePerType(const DataArrayInt *profile, std::vector<int>& code, std::vector<DataArrayInt *>& idsInPflPerType, std::vector<DataArrayInt *>& idsPerType) const
+void MEDCoupling1GTUMesh::splitProfilePerType(const DataArrayIdType *profile, std::vector<mcIdType>& code, std::vector<DataArrayIdType *>& idsInPflPerType, std::vector<DataArrayIdType *>& idsPerType, bool smartPflKiller) const
{
if(!profile)
throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::splitProfilePerType : input profile is NULL !");
if(profile->getNumberOfComponents()!=1)
throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::splitProfilePerType : input profile should have exactly one component !");
- int nbTuples=profile->getNumberOfTuples();
- int nbOfCells=getNumberOfCells();
+ mcIdType nbTuples=profile->getNumberOfTuples(),nbOfCells=getNumberOfCells();
code.resize(3); idsInPflPerType.resize(1);
- code[0]=(int)getCellModelEnum(); code[1]=nbTuples;
+ code[0]=ToIdType(getCellModelEnum()); code[1]=nbTuples;
idsInPflPerType.resize(1);
- if(profile->isIdentity() && nbTuples==nbOfCells)
+ if(smartPflKiller && profile->isIota(nbOfCells))
{
code[2]=-1;
- idsInPflPerType[0]=const_cast<DataArrayInt *>(profile); idsInPflPerType[0]->incrRef();
+ idsInPflPerType[0]=const_cast<DataArrayIdType *>(profile); idsInPflPerType[0]->incrRef();
idsPerType.clear();
return ;
}
code[2]=0;
profile->checkAllIdsInRange(0,nbOfCells);
idsPerType.resize(1);
- idsPerType[0]=const_cast<DataArrayInt *>(profile); idsPerType[0]->incrRef();
- idsInPflPerType[0]=DataArrayInt::Range(0,nbTuples,1);
+ idsPerType[0]=const_cast<DataArrayIdType *>(profile); idsPerType[0]->incrRef();
+ idsInPflPerType[0]=DataArrayIdType::Range(0,nbTuples,1);
}
/*!
*
* \sa MEDCouplingUMesh::checkTypeConsistencyAndContig
*/
-DataArrayInt *MEDCoupling1GTUMesh::checkTypeConsistencyAndContig(const std::vector<int>& code, const std::vector<const DataArrayInt *>& idsPerType) const
+DataArrayIdType *MEDCoupling1GTUMesh::checkTypeConsistencyAndContig(const std::vector<mcIdType>& code, const std::vector<const DataArrayIdType *>& idsPerType) const
{
- int nbOfCells=getNumberOfCells();
+ mcIdType nbOfCells=getNumberOfCells();
if(code.size()!=3)
throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::checkTypeConsistencyAndContig : invalid input code should be exactly of size 3 !");
- if(code[0]!=(int)getCellModelEnum())
+ if(code[0]!=ToIdType(getCellModelEnum()))
{
std::ostringstream oss; oss << "MEDCoupling1GTUMesh::checkTypeConsistencyAndContig : Mismatch of geometric type ! Asking for " << code[0] << " whereas the geometric type is \a this is " << getCellModelEnum() << " (" << _cm->getRepr() << ") !";
throw INTERP_KERNEL::Exception(oss.str().c_str());
if(code[2]!=0)
throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::checkTypeConsistencyAndContig : single geo type mesh ! 0 or -1 is expected at pos #2 of input code !");
if(idsPerType.size()!=1)
- throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::checkTypeConsistencyAndContig : input code points to DataArrayInt #0 whereas the size of idsPerType is not equal to 1 !");
- const DataArrayInt *pfl=idsPerType[0];
+ throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::checkTypeConsistencyAndContig : input code points to DataArrayIdType #0 whereas the size of idsPerType is not equal to 1 !");
+ const DataArrayIdType *pfl=idsPerType[0];
if(!pfl)
- throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::checkTypeConsistencyAndContig : the input code points to a NULL DataArrayInt at rank 0 !");
+ throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::checkTypeConsistencyAndContig : the input code points to a NULL DataArrayIdType at rank 0 !");
if(pfl->getNumberOfComponents()!=1)
throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::checkTypeConsistencyAndContig : input profile should have exactly one component !");
pfl->checkAllIdsInRange(0,nbOfCells);
pfl->incrRef();
- return const_cast<DataArrayInt *>(pfl);
+ return const_cast<DataArrayIdType *>(pfl);
}
void MEDCoupling1GTUMesh::writeVTKLL(std::ostream& ofs, const std::string& cellData, const std::string& pointData, DataArrayByte *byteData) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<MEDCouplingUMesh> m=buildUnstructured();
m->writeVTKLL(ofs,cellData,pointData,byteData);
}
return true;
}
-void MEDCoupling1GTUMesh::checkCoherency() const
+void MEDCoupling1GTUMesh::checkConsistencyLight() const
{
- MEDCouplingPointSet::checkCoherency();
+ MEDCouplingPointSet::checkConsistencyLight();
}
-DataArrayDouble *MEDCoupling1GTUMesh::getBarycenterAndOwner() const
+DataArrayDouble *MEDCoupling1GTUMesh::computeCellCenterOfMass() const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret=m->getBarycenterAndOwner();
+ MCAuto<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<DataArrayDouble> ret=m->computeCellCenterOfMass();
return ret.retn();
}
MEDCouplingFieldDouble *MEDCoupling1GTUMesh::getMeasureField(bool isAbs) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> ret=m->getMeasureField(isAbs);
+ MCAuto<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<MEDCouplingFieldDouble> ret=m->getMeasureField(isAbs);
ret->setMesh(this);
return ret.retn();
}
MEDCouplingFieldDouble *MEDCoupling1GTUMesh::getMeasureFieldOnNode(bool isAbs) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> ret=m->getMeasureFieldOnNode(isAbs);
+ MCAuto<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<MEDCouplingFieldDouble> ret=m->getMeasureFieldOnNode(isAbs);
ret->setMesh(this);
return ret.retn();
}
/*!
* to improve perf !
*/
-int MEDCoupling1GTUMesh::getCellContainingPoint(const double *pos, double eps) const
+mcIdType MEDCoupling1GTUMesh::getCellContainingPoint(const double *pos, double eps) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<MEDCouplingUMesh> m(buildUnstructured());
return m->getCellContainingPoint(pos,eps);
}
+/*!
+ * to improve perf !
+ */
+void MEDCoupling1GTUMesh::getCellsContainingPoint(const double *pos, double eps, std::vector<mcIdType>& elts) const
+{
+ MCAuto<MEDCouplingUMesh> m(buildUnstructured());
+ return m->getCellsContainingPoint(pos,eps,elts);
+}
+
MEDCouplingFieldDouble *MEDCoupling1GTUMesh::buildOrthogonalField() const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingFieldDouble> ret=m->buildOrthogonalField();
+ MCAuto<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<MEDCouplingFieldDouble> ret=m->buildOrthogonalField();
ret->setMesh(this);
return ret.retn();
}
-DataArrayInt *MEDCoupling1GTUMesh::getCellsInBoundingBox(const double *bbox, double eps) const
+DataArrayIdType *MEDCoupling1GTUMesh::getCellsInBoundingBox(const double *bbox, double eps) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<MEDCouplingUMesh> m=buildUnstructured();
return m->getCellsInBoundingBox(bbox,eps);
}
-DataArrayInt *MEDCoupling1GTUMesh::getCellsInBoundingBox(const INTERP_KERNEL::DirectedBoundingBox& bbox, double eps)
+DataArrayIdType *MEDCoupling1GTUMesh::getCellsInBoundingBox(const INTERP_KERNEL::DirectedBoundingBox& bbox, double eps)
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<MEDCouplingUMesh> m=buildUnstructured();
return m->getCellsInBoundingBox(bbox,eps);
}
-MEDCouplingPointSet *MEDCoupling1GTUMesh::buildFacePartOfMySelfNode(const int *start, const int *end, bool fullyIn) const
+MEDCouplingPointSet *MEDCoupling1GTUMesh::buildFacePartOfMySelfNode(const mcIdType *start, const mcIdType *end, bool fullyIn) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<MEDCouplingUMesh> m=buildUnstructured();
return m->buildFacePartOfMySelfNode(start,end,fullyIn);
}
-DataArrayInt *MEDCoupling1GTUMesh::findBoundaryNodes() const
+DataArrayIdType *MEDCoupling1GTUMesh::findBoundaryNodes() const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<MEDCouplingUMesh> m=buildUnstructured();
return m->findBoundaryNodes();
}
MEDCouplingPointSet *MEDCoupling1GTUMesh::buildBoundaryMesh(bool keepCoords) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<MEDCouplingUMesh> m=buildUnstructured();
return m->buildBoundaryMesh(keepCoords);
}
-void MEDCoupling1GTUMesh::findCommonCells(int compType, int startCellId, DataArrayInt *& commonCellsArr, DataArrayInt *& commonCellsIArr) const
+void MEDCoupling1GTUMesh::findCommonCells(int compType, mcIdType startCellId, DataArrayIdType *& commonCellsArr, DataArrayIdType *& commonCellsIArr) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> m=buildUnstructured();
+ MCAuto<MEDCouplingUMesh> m=buildUnstructured();
m->findCommonCells(compType,startCellId,commonCellsArr,commonCellsIArr);
}
-int MEDCoupling1GTUMesh::getNodalConnectivityLength() const
+mcIdType MEDCoupling1GTUMesh::getNodalConnectivityLength() const
{
- const DataArrayInt *c1(getNodalConnectivity());
+ const DataArrayIdType *c1(getNodalConnectivity());
if(!c1)
throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::getNodalConnectivityLength : no connectivity set !");
if(c1->getNumberOfComponents()!=1)
throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::AggregateOnSameCoordsToUMesh : the first instance in input parts is null !");
const DataArrayDouble *coords(firstPart->getCoords());
int meshDim(firstPart->getMeshDimension());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret(MEDCouplingUMesh::New(firstPart->getName(),meshDim)); ret->setDescription(firstPart->getDescription());
+ MCAuto<MEDCouplingUMesh> ret(MEDCouplingUMesh::New(firstPart->getName(),meshDim)); ret->setDescription(firstPart->getDescription());
ret->setCoords(coords);
- int nbOfCells(0),connSize(0);
+ mcIdType nbOfCells(0),connSize(0);
for(std::vector< const MEDCoupling1GTUMesh *>::const_iterator it=parts.begin();it!=parts.end();it++)
{
if(!(*it))
nbOfCells+=(*it)->getNumberOfCells();
connSize+=(*it)->getNodalConnectivityLength();
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn(DataArrayInt::New()),connI(DataArrayInt::New());
+ MCAuto<DataArrayIdType> conn(DataArrayIdType::New()),connI(DataArrayIdType::New());
connI->alloc(nbOfCells+1,1); conn->alloc(connSize+nbOfCells,1);
- int *c(conn->getPointer()),*ci(connI->getPointer()); *ci=0;
+ mcIdType *c(conn->getPointer()),*ci(connI->getPointer()); *ci=0;
for(std::vector< const MEDCoupling1GTUMesh *>::const_iterator it=parts.begin();it!=parts.end();it++)
{
- int curNbCells((*it)->getNumberOfCells());
- int geoType((int)(*it)->getCellModelEnum());
- const int *cinPtr((*it)->getNodalConnectivity()->begin());
+ mcIdType curNbCells=(*it)->getNumberOfCells();
+ mcIdType geoType(ToIdType((*it)->getCellModelEnum()));
+ const mcIdType *cinPtr((*it)->getNodalConnectivity()->begin());
const MEDCoupling1SGTUMesh *ps(dynamic_cast<const MEDCoupling1SGTUMesh *>(*it));
const MEDCoupling1DGTUMesh *pd(dynamic_cast<const MEDCoupling1DGTUMesh *>(*it));
if(ps && !pd)
{
- int nNodesPerCell(ps->getNumberOfNodesPerCell());
+ mcIdType nNodesPerCell(ps->getNumberOfNodesPerCell());
for(int i=0;i<curNbCells;i++,ci++,cinPtr+=nNodesPerCell)
{
*c++=geoType;
}
else if(!ps && pd)
{
- const int *ciinPtr(pd->getNodalConnectivityIndex()->begin());
+ const mcIdType *ciinPtr(pd->getNodalConnectivityIndex()->begin());
for(int i=0;i<curNbCells;i++,ci++,ciinPtr++)
{
*c++=geoType;
{
if(recDeepCpy)
{
- const DataArrayInt *c(other._conn);
+ const DataArrayIdType *c(other._conn);
if(c)
- _conn=c->deepCpy();
+ _conn=c->deepCopy();
}
}
std::set<INTERP_KERNEL::NormalizedCellType> gts(m->getAllGeoTypes());
if(gts.size()!=1)
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::New : input mesh must have exactly one geometric type !");
- int geoType((int)*gts.begin());
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(MEDCoupling1SGTUMesh::New(m->getName(),*gts.begin()));
+ mcIdType geoType(ToIdType(*gts.begin()));
+ MCAuto<MEDCoupling1SGTUMesh> ret(MEDCoupling1SGTUMesh::New(m->getName(),*gts.begin()));
ret->setCoords(m->getCoords()); ret->setDescription(m->getDescription());
- int nbCells(m->getNumberOfCells());
- int nbOfNodesPerCell(ret->getNumberOfNodesPerCell());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn(DataArrayInt::New()); conn->alloc(nbCells*nbOfNodesPerCell,1);
- int *c(conn->getPointer());
- const int *cin(m->getNodalConnectivity()->begin()),*ciin(m->getNodalConnectivityIndex()->begin());
- for(int i=0;i<nbCells;i++,ciin++)
+ mcIdType nbCells=m->getNumberOfCells();
+ mcIdType nbOfNodesPerCell(ret->getNumberOfNodesPerCell());
+ MCAuto<DataArrayIdType> conn(DataArrayIdType::New()); conn->alloc(nbCells*nbOfNodesPerCell,1);
+ mcIdType *c(conn->getPointer());
+ const mcIdType *cin(m->getNodalConnectivity()->begin()),*ciin(m->getNodalConnectivityIndex()->begin());
+ for(mcIdType i=0;i<nbCells;i++,ciin++)
{
if(cin[ciin[0]]==geoType)
{
}
/*!
- * This method behaves mostly like MEDCoupling1SGTUMesh::deepCpy method, except that only nodal connectivity arrays are deeply copied.
+ * This method behaves mostly like MEDCoupling1SGTUMesh::deepCopy method, except that only nodal connectivity arrays are deeply copied.
* The coordinates are shared between \a this and the returned instance.
*
- * \return MEDCouplingUMesh * - A new object instance holding the copy of \a this (deep for connectivity, shallow for coordiantes)
- * \sa MEDCoupling1SGTUMesh::deepCpy
+ * \return MEDCoupling1SGTUMesh * - A new object instance holding the copy of \a this (deep for connectivity, shallow for coordiantes)
+ * \sa MEDCoupling1SGTUMesh::deepCopy
*/
-MEDCouplingPointSet *MEDCoupling1SGTUMesh::deepCpyConnectivityOnly() const
+MEDCoupling1SGTUMesh *MEDCoupling1SGTUMesh::deepCopyConnectivityOnly() const
{
- checkCoherency();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(clone(false));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c(_conn->deepCpy());
+ checkConsistencyLight();
+ MCAuto<MEDCoupling1SGTUMesh> ret(clone(false));
+ MCAuto<DataArrayIdType> c(_conn->deepCopy());
ret->setNodalConnectivity(c);
return ret.retn();
}
void MEDCoupling1SGTUMesh::updateTime() const
{
MEDCoupling1GTUMesh::updateTime();
- const DataArrayInt *c(_conn);
+ const DataArrayIdType *c(_conn);
if(c)
updateTimeWith(*c);
}
return MEDCoupling1GTUMesh::getHeapMemorySizeWithoutChildren();
}
-std::vector<const BigMemoryObject *> MEDCoupling1SGTUMesh::getDirectChildren() const
+std::vector<const BigMemoryObject *> MEDCoupling1SGTUMesh::getDirectChildrenWithNull() const
{
- std::vector<const BigMemoryObject *> ret(MEDCoupling1GTUMesh::getDirectChildren());
- const DataArrayInt *c(_conn);
- if(c)
- ret.push_back(c);
+ std::vector<const BigMemoryObject *> ret(MEDCoupling1GTUMesh::getDirectChildrenWithNull());
+ ret.push_back((const DataArrayIdType *)_conn);
return ret;
}
-MEDCouplingMesh *MEDCoupling1SGTUMesh::deepCpy() const
+MEDCoupling1SGTUMesh *MEDCoupling1SGTUMesh::deepCopy() const
{
return clone(true);
}
}
if(!MEDCoupling1GTUMesh::isEqualIfNotWhy(other,prec,reason))
return false;
- const DataArrayInt *c1(_conn),*c2(otherC->_conn);
+ const DataArrayIdType *c1(_conn),*c2(otherC->_conn);
if(c1==c2)
return true;
if(!c1 || !c2)
}
if(!c1->isEqualIfNotWhy(*c2,reason))
{
- reason.insert(0,"Nodal connectivity DataArrayInt differ : ");
+ reason.insert(0,"Nodal connectivity DataArrayIdType differ : ");
return false;
}
return true;
return false;
if(!MEDCoupling1GTUMesh::isEqualWithoutConsideringStr(other,prec))
return false;
- const DataArrayInt *c1(_conn),*c2(otherC->_conn);
+ const DataArrayIdType *c1(_conn),*c2(otherC->_conn);
if(c1==c2)
return true;
if(!c1 || !c2)
return true;
}
-void MEDCoupling1SGTUMesh::checkCoherencyOfConnectivity() const
+void MEDCoupling1SGTUMesh::checkConsistencyOfConnectivity() const
{
- const DataArrayInt *c1(_conn);
+ const DataArrayIdType *c1(_conn);
if(c1)
{
if(c1->getNumberOfComponents()!=1)
throw INTERP_KERNEL::Exception("Nodal connectivity array not defined !");
}
-void MEDCoupling1SGTUMesh::checkCoherency() const
+void MEDCoupling1SGTUMesh::checkConsistencyLight() const
{
- MEDCouplingPointSet::checkCoherency();
- checkCoherencyOfConnectivity();
+ MEDCouplingPointSet::checkConsistencyLight();
+ checkConsistencyOfConnectivity();
}
-void MEDCoupling1SGTUMesh::checkCoherency1(double eps) const
+void MEDCoupling1SGTUMesh::checkConsistency(double eps) const
{
- checkCoherency();
- const DataArrayInt *c1(_conn);
- int nbOfTuples=c1->getNumberOfTuples();
- int nbOfNodesPerCell=(int)_cm->getNumberOfNodes();
+ checkConsistencyLight();
+ const DataArrayIdType *c1(_conn);
+ mcIdType nbOfTuples(c1->getNumberOfTuples());
+ mcIdType nbOfNodesPerCell=_cm->getNumberOfNodes();
if(nbOfTuples%nbOfNodesPerCell!=0)
{
- std::ostringstream oss; oss << "MEDCoupling1SGTUMesh::checkCoherency1 : the nb of tuples in conn is " << nbOfTuples << " and number of nodes per cell is " << nbOfNodesPerCell << ". But " << nbOfTuples << "%" << nbOfNodesPerCell << " !=0 !";
+ std::ostringstream oss; oss << "MEDCoupling1SGTUMesh::checkConsistency : the nb of tuples in conn is " << nbOfTuples << " and number of nodes per cell is " << nbOfNodesPerCell << ". But " << nbOfTuples << "%" << nbOfNodesPerCell << " !=0 !";
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
- int nbOfNodes=getNumberOfNodes();
- int nbOfCells=nbOfTuples/nbOfNodesPerCell;
- const int *w(c1->begin());
- for(int i=0;i<nbOfCells;i++)
+ mcIdType nbOfNodes=getNumberOfNodes();
+ mcIdType nbOfCells=nbOfTuples/nbOfNodesPerCell;
+ const mcIdType *w(c1->begin());
+ for(mcIdType i=0;i<nbOfCells;i++)
for(int j=0;j<nbOfNodesPerCell;j++,w++)
{
if(*w<0 || *w>=nbOfNodes)
}
}
-void MEDCoupling1SGTUMesh::checkCoherency2(double eps) const
+mcIdType MEDCoupling1SGTUMesh::getNumberOfCells() const
{
- checkCoherency1(eps);
-}
-
-int MEDCoupling1SGTUMesh::getNumberOfCells() const
-{
- int nbOfTuples=getNodalConnectivityLength();
- int nbOfNodesPerCell=getNumberOfNodesPerCell();
+ mcIdType nbOfTuples(getNodalConnectivityLength());
+ mcIdType nbOfNodesPerCell(getNumberOfNodesPerCell());
if(nbOfTuples%nbOfNodesPerCell!=0)
{
std::ostringstream oss; oss << "MEDCoupling1SGTUMesh:getNumberOfCells: : the nb of tuples in conn is " << nbOfTuples << " and number of nodes per cell is " << nbOfNodesPerCell << ". But " << nbOfTuples << "%" << nbOfNodesPerCell << " !=0 !";
return nbOfTuples/nbOfNodesPerCell;
}
-int MEDCoupling1SGTUMesh::getNumberOfNodesInCell(int cellId) const
+mcIdType MEDCoupling1SGTUMesh::getNumberOfNodesInCell(mcIdType cellId) const
{
return getNumberOfNodesPerCell();
}
-int MEDCoupling1SGTUMesh::getNumberOfNodesPerCell() const
+mcIdType MEDCoupling1SGTUMesh::getNumberOfNodesPerCell() const
{
checkNonDynamicGeoType();
- return (int)_cm->getNumberOfNodes();
+ return _cm->getNumberOfNodes();
}
-DataArrayInt *MEDCoupling1SGTUMesh::computeNbOfNodesPerCell() const
+DataArrayIdType *MEDCoupling1SGTUMesh::computeNbOfNodesPerCell() const
{
checkNonDynamicGeoType();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New();
ret->alloc(getNumberOfCells(),1);
- ret->fillWithValue((int)_cm->getNumberOfNodes());
+ ret->fillWithValue(_cm->getNumberOfNodes());
return ret.retn();
}
-DataArrayInt *MEDCoupling1SGTUMesh::computeNbOfFacesPerCell() const
+DataArrayIdType *MEDCoupling1SGTUMesh::computeNbOfFacesPerCell() const
{
checkNonDynamicGeoType();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New();
ret->alloc(getNumberOfCells(),1);
- ret->fillWithValue((int)_cm->getNumberOfSons());
+ ret->fillWithValue(ToIdType(_cm->getNumberOfSons()));
return ret.retn();
}
-DataArrayInt *MEDCoupling1SGTUMesh::computeEffectiveNbOfNodesPerCell() const
+DataArrayIdType *MEDCoupling1SGTUMesh::computeEffectiveNbOfNodesPerCell() const
{
checkNonDynamicGeoType();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
- int nbCells(getNumberOfCells());
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New();
+ mcIdType nbCells=getNumberOfCells();
ret->alloc(nbCells,1);
- int *retPtr(ret->getPointer());
- int nbNodesPerCell(getNumberOfNodesPerCell());
- const int *conn(_conn->begin());
- for(int i=0;i<nbCells;i++,conn+=nbNodesPerCell,retPtr++)
+ mcIdType *retPtr(ret->getPointer());
+ mcIdType nbNodesPerCell(getNumberOfNodesPerCell());
+ const mcIdType *conn(_conn->begin());
+ for(mcIdType i=0;i<nbCells;i++,conn+=nbNodesPerCell,retPtr++)
{
- std::set<int> s(conn,conn+nbNodesPerCell);
- *retPtr=(int)s.size();
+ std::set<mcIdType> s(conn,conn+nbNodesPerCell);
+ *retPtr=ToIdType(s.size());
}
return ret.retn();
}
-void MEDCoupling1SGTUMesh::getNodeIdsOfCell(int cellId, std::vector<int>& conn) const
+void MEDCoupling1SGTUMesh::getNodeIdsOfCell(mcIdType cellId, std::vector<mcIdType>& conn) const
{
- int sz=getNumberOfNodesPerCell();
+ mcIdType sz=getNumberOfNodesPerCell();
conn.resize(sz);
- if(cellId>=0 && cellId<getNumberOfCells())
+ if(cellId<getNumberOfCells())
std::copy(_conn->begin()+cellId*sz,_conn->begin()+(cellId+1)*sz,conn.begin());
else
{
{
static const char msg0[]="No coordinates specified !";
std::ostringstream ret;
+ if(!_cm)
+ {
+ ret << "No geometric type specified" << std::endl;
+ return ret.str();
+ }
ret << "Single static geometic type (" << _cm->getRepr() << ") unstructured mesh with name : \"" << getName() << "\"\n";
ret << "Description of mesh : \"" << getDescription() << "\"\n";
int tmpp1,tmpp2;
else
ret << msg0 << "\n";
ret << "Number of cells : ";
- if((const DataArrayInt *)_conn)
+ if((const DataArrayIdType *)_conn)
{
if(_conn->isAllocated())
{
ret << "No array set !\n";
ret << "\n\nConnectivity array : \n____________________\n\n";
//
- if((const DataArrayInt *)_conn)
+ if((const DataArrayIdType *)_conn)
{
if(_conn->isAllocated())
{
if(_conn->getNumberOfComponents()==1)
{
- int nbOfCells=getNumberOfCells();
- int sz=getNumberOfNodesPerCell();
- const int *connPtr=_conn->begin();
- for(int i=0;i<nbOfCells;i++,connPtr+=sz)
+ mcIdType nbOfCells=getNumberOfCells();
+ mcIdType sz=getNumberOfNodesPerCell();
+ const mcIdType *connPtr=_conn->begin();
+ for(mcIdType i=0;i<nbOfCells;i++,connPtr+=sz)
{
ret << "Cell #" << i << " : ";
- std::copy(connPtr,connPtr+sz,std::ostream_iterator<int>(ret," "));
+ std::copy(connPtr,connPtr+sz,std::ostream_iterator<mcIdType>(ret," "));
ret << "\n";
}
}
DataArrayDouble *MEDCoupling1SGTUMesh::computeIsoBarycenterOfNodesPerCell() const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> ret=DataArrayDouble::New();
int spaceDim=getSpaceDimension();
- int nbOfCells=getNumberOfCells();//checkCoherency()
- int nbOfNodes=getNumberOfNodes();
+ mcIdType nbOfCells=getNumberOfCells();//checkConsistencyLight()
+ mcIdType nbOfNodes=getNumberOfNodes();
ret->alloc(nbOfCells,spaceDim);
double *ptToFill=ret->getPointer();
const double *coor=_coords->begin();
- const int *nodal=_conn->begin();
- int sz=getNumberOfNodesPerCell();
- double coeff=1./(double)sz;
- for(int i=0;i<nbOfCells;i++,ptToFill+=spaceDim)
+ const mcIdType *nodal=_conn->begin();
+ mcIdType sz=getNumberOfNodesPerCell();
+ double coeff=1./FromIdType<double>(sz);
+ for(mcIdType i=0;i<nbOfCells;i++,ptToFill+=spaceDim)
{
std::fill(ptToFill,ptToFill+spaceDim,0.);
- for(int j=0;j<sz;j++,nodal++)
+ for(mcIdType j=0;j<sz;j++,nodal++)
if(*nodal>=0 && *nodal<nbOfNodes)
std::transform(coor+spaceDim*nodal[0],coor+spaceDim*(nodal[0]+1),ptToFill,ptToFill,std::plus<double>());
else
std::ostringstream oss; oss << "MEDCoupling1SGTUMesh::computeIsoBarycenterOfNodesPerCell : on cell #" << i << " presence of nodeId #" << *nodal << " should be in [0," << nbOfNodes << ") !";
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
- std::transform(ptToFill,ptToFill+spaceDim,ptToFill,std::bind2nd(std::multiplies<double>(),coeff));
+ std::transform(ptToFill,ptToFill+spaceDim,ptToFill,std::bind(std::multiplies<double>(),std::placeholders::_1,coeff));
}
return ret.retn();
}
-void MEDCoupling1SGTUMesh::renumberCells(const int *old2NewBg, bool check)
+void MEDCoupling1SGTUMesh::renumberCells(const mcIdType *old2NewBg, bool check)
{
- int nbCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> o2n=DataArrayInt::New();
- o2n->useArray(old2NewBg,false,C_DEALLOC,nbCells,1);
+ mcIdType nbCells=getNumberOfCells();
+ MCAuto<DataArrayIdType> o2n=DataArrayIdType::New();
+ o2n->useArray(old2NewBg,false,DeallocType::C_DEALLOC,nbCells,1);
if(check)
o2n=o2n->checkAndPreparePermutation();
//
- const int *conn=_conn->begin();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> n2o=o2n->invertArrayO2N2N2O(nbCells);
- const int *n2oPtr=n2o->begin();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New();
+ const mcIdType *conn=_conn->begin();
+ MCAuto<DataArrayIdType> n2o=o2n->invertArrayO2N2N2O(nbCells);
+ const mcIdType *n2oPtr=n2o->begin();
+ MCAuto<DataArrayIdType> newConn=DataArrayIdType::New();
newConn->alloc(_conn->getNumberOfTuples(),1);
newConn->copyStringInfoFrom(*_conn);
- int sz=getNumberOfNodesPerCell();
+ mcIdType sz=getNumberOfNodesPerCell();
//
- int *newC=newConn->getPointer();
- for(int i=0;i<nbCells;i++,newC+=sz)
+ mcIdType *newC=newConn->getPointer();
+ for(mcIdType i=0;i<nbCells;i++,newC+=sz)
{
- int pos=n2oPtr[i];
+ mcIdType pos=n2oPtr[i];
std::copy(conn+pos*sz,conn+(pos+1)*sz,newC);
}
_conn=newConn;
* \param [in] fullyIn input that specifies if all node ids must be in [\a begin,\a end) array to consider cell to be in.
* \param [in,out] cellIdsKeptArr array where all candidate cell ids are put at the end.
*/
-void MEDCoupling1SGTUMesh::fillCellIdsToKeepFromNodeIds(const int *begin, const int *end, bool fullyIn, DataArrayInt *&cellIdsKeptArr) const
+void MEDCoupling1SGTUMesh::fillCellIdsToKeepFromNodeIds(const mcIdType *begin, const mcIdType *end, bool fullyIn, DataArrayIdType *&cellIdsKeptArr) const
{
- int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellIdsKept=DataArrayInt::New(); cellIdsKept->alloc(0,1);
- int tmp=-1;
- int sz=_conn->getMaxValue(tmp); sz=std::max(sz,0)+1;
+ mcIdType nbOfCells=getNumberOfCells();
+ MCAuto<DataArrayIdType> cellIdsKept=DataArrayIdType::New(); cellIdsKept->alloc(0,1);
+ mcIdType tmp=-1;
+ mcIdType sz=_conn->getMaxValue(tmp); sz=std::max(sz,ToIdType(0))+1;
std::vector<bool> fastFinder(sz,false);
- for(const int *work=begin;work!=end;work++)
+ for(const mcIdType *work=begin;work!=end;work++)
if(*work>=0 && *work<sz)
fastFinder[*work]=true;
- const int *conn=_conn->begin();
- int nbNodesPerCell=getNumberOfNodesPerCell();
- for(int i=0;i<nbOfCells;i++,conn+=nbNodesPerCell)
+ const mcIdType *conn=_conn->begin();
+ mcIdType nbNodesPerCell=getNumberOfNodesPerCell();
+ for(mcIdType i=0;i<nbOfCells;i++,conn+=nbNodesPerCell)
{
int ref=0,nbOfHit=0;
- for(int j=0;j<nbNodesPerCell;j++)
+ for(mcIdType j=0;j<nbNodesPerCell;j++)
if(conn[j]>=0)
{
ref++;
MEDCouplingUMesh *MEDCoupling1SGTUMesh::buildUnstructured() const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName(),getMeshDimension());
+ MCAuto<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName(),getMeshDimension());
ret->setCoords(getCoords());
- const int *nodalConn=_conn->begin();
- int nbCells=getNumberOfCells();
- int nbNodesPerCell=getNumberOfNodesPerCell();
- int geoType=(int)getCellModelEnum();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c=DataArrayInt::New(); c->alloc(nbCells*(nbNodesPerCell+1),1);
- int *cPtr=c->getPointer();
- for(int i=0;i<nbCells;i++,nodalConn+=nbNodesPerCell)
+ const mcIdType *nodalConn=_conn->begin();
+ mcIdType nbCells=getNumberOfCells();
+ mcIdType nbNodesPerCell=getNumberOfNodesPerCell();
+ mcIdType geoType=ToIdType(getCellModelEnum());
+ MCAuto<DataArrayIdType> c=DataArrayIdType::New(); c->alloc(nbCells*(nbNodesPerCell+1),1);
+ mcIdType *cPtr=c->getPointer();
+ for(mcIdType i=0;i<nbCells;i++,nodalConn+=nbNodesPerCell)
{
*cPtr++=geoType;
cPtr=std::copy(nodalConn,nodalConn+nbNodesPerCell,cPtr);
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cI=DataArrayInt::Range(0,(nbCells+1)*(nbNodesPerCell+1),nbNodesPerCell+1);
+ MCAuto<DataArrayIdType> cI=DataArrayIdType::Range(0,(nbCells+1)*(nbNodesPerCell+1),nbNodesPerCell+1);
ret->setConnectivity(c,cI,true);
try
{ ret->copyTinyInfoFrom(this); }
return ret.retn();
}
-DataArrayInt *MEDCoupling1SGTUMesh::simplexize(int policy)
+DataArrayIdType *MEDCoupling1SGTUMesh::simplexize(int policy)
{
switch(policy)
{
return simplexizePol0();
case 1:
return simplexizePol1();
- case (int) INTERP_KERNEL::PLANAR_FACE_5:
+ case INTERP_KERNEL::PLANAR_FACE_5:
return simplexizePlanarFace5();
- case (int) INTERP_KERNEL::PLANAR_FACE_6:
+ case INTERP_KERNEL::PLANAR_FACE_6:
return simplexizePlanarFace6();
default:
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::simplexize : unrecognized policy ! Must be :\n - 0 or 1 (only available for meshdim=2) \n - PLANAR_FACE_5, PLANAR_FACE_6 (only for meshdim=3)");
struct MEDCouplingAccVisit
{
MEDCouplingAccVisit():_new_nb_of_nodes(0) { }
- int operator()(int val) { if(val!=-1) return _new_nb_of_nodes++; else return -1; }
- int _new_nb_of_nodes;
+ mcIdType operator()(mcIdType val) { if(val!=-1) return _new_nb_of_nodes++; else return -1; }
+ mcIdType _new_nb_of_nodes;
};
/// @endcond
+/*!
+ * This method returns all node ids used in \b this. The data array returned has to be dealt by the caller.
+ * The returned node ids are sortes ascendingly. This method is closed to MEDCoupling1SGTUMesh::getNodeIdsInUse except
+ * the format of returned DataArrayIdType instance.
+ *
+ * \return a newly allocated DataArrayIdType sorted ascendingly of fetched node ids.
+ * \sa MEDCoupling1SGTUMesh::getNodeIdsInUse, areAllNodesFetched
+ */
+DataArrayIdType *MEDCoupling1SGTUMesh::computeFetchedNodeIds() const
+{
+ checkConsistencyOfConnectivity();
+ mcIdType nbNodes(getNumberOfNodes());
+ std::vector<bool> fetchedNodes(nbNodes,false);
+ computeNodeIdsAlg(fetchedNodes);
+ mcIdType sz(ToIdType(std::count(fetchedNodes.begin(),fetchedNodes.end(),true)));
+ MCAuto<DataArrayIdType> ret(DataArrayIdType::New()); ret->alloc(sz,1);
+ mcIdType *retPtr(ret->getPointer());
+ for(mcIdType i=0;i<nbNodes;i++)
+ if(fetchedNodes[i])
+ *retPtr++=i;
+ return ret.retn();
+}
+
/*!
* Finds nodes not used in any cell and returns an array giving a new id to every node
* by excluding the unused nodes, for which the array holds -1. The result array is
* a mapping in "Old to New" mode.
* \param [out] nbrOfNodesInUse - number of node ids present in the nodal connectivity.
- * \return DataArrayInt * - a new instance of DataArrayInt. Its length is \a
+ * \return DataArrayIdType * - a new instance of DataArrayIdType. Its length is \a
* this->getNumberOfNodes(). It holds for each node of \a this mesh either -1
* if the node is unused or a new id else. The caller is to delete this
* array using decrRef() as it is no more needed.
* \throw If the coordinates array is not set.
* \throw If the nodal connectivity of cells is not defined.
* \throw If the nodal connectivity includes an invalid id.
+ * \sa MEDCoupling1SGTUMesh::computeFetchedNodeIds, areAllNodesFetched
*/
-DataArrayInt *MEDCoupling1SGTUMesh::getNodeIdsInUse(int& nbrOfNodesInUse) const
+DataArrayIdType *MEDCoupling1SGTUMesh::getNodeIdsInUse(mcIdType& nbrOfNodesInUse) const
{
nbrOfNodesInUse=-1;
- int nbOfNodes=getNumberOfNodes();
- int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ mcIdType nbOfNodes=getNumberOfNodes();
+ mcIdType nbOfCells=getNumberOfCells();
+ MCAuto<DataArrayIdType> ret(DataArrayIdType::New());
ret->alloc(nbOfNodes,1);
- int *traducer=ret->getPointer();
+ mcIdType *traducer=ret->getPointer();
std::fill(traducer,traducer+nbOfNodes,-1);
- const int *conn=_conn->begin();
- int nbNodesPerCell=getNumberOfNodesPerCell();
- for(int i=0;i<nbOfCells;i++)
+ const mcIdType *conn=_conn->begin();
+ mcIdType nbNodesPerCell=getNumberOfNodesPerCell();
+ for(mcIdType i=0;i<nbOfCells;i++)
for(int j=0;j<nbNodesPerCell;j++,conn++)
if(*conn>=0 && *conn<nbOfNodes)
traducer[*conn]=1;
std::ostringstream oss; oss << "MEDCoupling1SGTUMesh::getNodeIdsInUse : In cell #" << i << " presence of node id " << conn[j] << " not in [0," << nbOfNodes << ") !";
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
- nbrOfNodesInUse=(int)std::count(traducer,traducer+nbOfNodes,1);
+ nbrOfNodesInUse=ToIdType(std::count(traducer,traducer+nbOfNodes,1));
std::transform(traducer,traducer+nbOfNodes,traducer,MEDCouplingAccVisit());
return ret.retn();
}
+/*!
+ * This method renumbers only nodal connectivity in \a this. The renumbering is only an offset applied. So this method is a specialization of
+ * \a renumberNodesInConn. \b WARNING, this method does not check that the resulting node ids in the nodal connectivity is in a valid range !
+ *
+ * \param [in] offset - specifies the offset to be applied on each element of connectivity.
+ *
+ * \sa renumberNodesInConn
+ */
+void MEDCoupling1SGTUMesh::renumberNodesWithOffsetInConn(mcIdType offset)
+{
+ getNumberOfCells();//only to check that all is well defined.
+ _conn->applyLin(1,offset);
+ updateTime();
+}
+
+/*!
+ * Same than renumberNodesInConn(const mcIdType *) except that here the format of old-to-new traducer is using map instead
+ * of array. This method is dedicated for renumbering from a big set of nodes the a tiny set of nodes which is the case during extraction
+ * of a big mesh.
+ */
+void MEDCoupling1SGTUMesh::renumberNodesInConn(const INTERP_KERNEL::HashMap<mcIdType,mcIdType>& newNodeNumbersO2N)
+{
+ this->renumberNodesInConnT< INTERP_KERNEL::HashMap<mcIdType,mcIdType> >(newNodeNumbersO2N);
+}
+
+/*!
+ * Same than renumberNodesInConn(const mcIdType *) except that here the format of old-to-new traducer is using map instead
+ * of array. This method is dedicated for renumbering from a big set of nodes the a tiny set of nodes which is the case during extraction
+ * of a big mesh.
+ */
+void MEDCoupling1SGTUMesh::renumberNodesInConn(const std::map<mcIdType,mcIdType>& newNodeNumbersO2N)
+{
+ this->renumberNodesInConnT< std::map<mcIdType,mcIdType> >(newNodeNumbersO2N);
+}
+
/*!
* Changes ids of nodes within the nodal connectivity arrays according to a permutation
* array in "Old to New" mode. The node coordinates array is \b not changed by this method.
* \warning This method performs no check of validity of new ids. **Use it with care !**
* \param [in] newNodeNumbersO2N - a permutation array, of length \a
* this->getNumberOfNodes(), in "Old to New" mode.
- * See \ref MEDCouplingArrayRenumbering for more info on renumbering modes.
+ * See \ref numbering for more info on renumbering modes.
* \throw If the nodal connectivity of cells is not defined.
*/
-void MEDCoupling1SGTUMesh::renumberNodesInConn(const int *newNodeNumbersO2N)
+void MEDCoupling1SGTUMesh::renumberNodesInConn(const mcIdType *newNodeNumbersO2N)
{
getNumberOfCells();//only to check that all is well defined.
_conn->transformWithIndArr(newNodeNumbersO2N,newNodeNumbersO2N+getNumberOfNodes());
for(std::size_t ii=0;ii<sz;ii++)
if(&(a[ii]->getCellModel())!=cm)
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::Merge1SGTUMeshes : all items must have the same geo type !");
- std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> > bb(sz);
+ std::vector< MCAuto<MEDCoupling1SGTUMesh> > bb(sz);
std::vector< const MEDCoupling1SGTUMesh * > aa(sz);
- int spaceDim=-3;
- for(std::size_t i=0;i<sz && spaceDim==-3;i++)
+ std::size_t spaceDimUndef=-3, spaceDim=spaceDimUndef;
+ for(std::size_t i=0;i<sz && spaceDim==spaceDimUndef;i++)
{
const MEDCoupling1SGTUMesh *cur=a[i];
const DataArrayDouble *coo=cur->getCoords();
if(coo)
spaceDim=coo->getNumberOfComponents();
}
- if(spaceDim==-3)
+ if(spaceDim==spaceDimUndef)
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::Merge1SGTUMeshes : no spaceDim specified ! unable to perform merge !");
for(std::size_t i=0;i<sz;i++)
{
std::vector<const MEDCoupling1SGTUMesh *>::const_iterator it=a.begin();
if(!(*it))
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::Merge1SGTUMeshesOnSameCoords : null instance in the first element of input vector !");
- std::vector<const DataArrayInt *> ncs(a.size());
+ std::vector<const DataArrayIdType *> ncs(a.size());
(*it)->getNumberOfCells();//to check that all is OK
const DataArrayDouble *coords=(*it)->getCoords();
const INTERP_KERNEL::CellModel *cm=&((*it)->getCellModel());
if(coords!=(*it)->getCoords())
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::Merge1SGTUMeshesOnSameCoords : not lying on same coords !");
}
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh("merge",*cm));
+ MCAuto<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh("merge",*cm));
ret->setCoords(coords);
- ret->_conn=DataArrayInt::Aggregate(ncs);
+ ret->_conn=DataArrayIdType::Aggregate(ncs);
return ret.retn();
}
if(a.empty())
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::Merge1SGTUMeshes : input array must be NON EMPTY !");
std::vector<const MEDCoupling1SGTUMesh *>::const_iterator it=a.begin();
- int nbOfCells=(*it)->getNumberOfCells();
+ mcIdType nbOfCells=(*it)->getNumberOfCells();
const INTERP_KERNEL::CellModel *cm=&((*it)->getCellModel());
- int nbNodesPerCell=(*it)->getNumberOfNodesPerCell();
+ mcIdType nbNodesPerCell=(*it)->getNumberOfNodesPerCell();
it++;
for(;it!=a.end();it++)
{
}
std::vector<const MEDCouplingPointSet *> aps(a.size());
std::copy(a.begin(),a.end(),aps.begin());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> pts=MergeNodesArray(aps);
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh("merge",*cm));
+ MCAuto<DataArrayDouble> pts=MergeNodesArray(aps);
+ MCAuto<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh("merge",*cm));
ret->setCoords(pts);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c=DataArrayInt::New();
+ MCAuto<DataArrayIdType> c=DataArrayIdType::New();
c->alloc(nbOfCells*nbNodesPerCell,1);
- int *cPtr=c->getPointer();
- int offset=0;
+ mcIdType *cPtr=c->getPointer();
+ mcIdType offset=0;
for(it=a.begin();it!=a.end();it++)
{
- int curConnLgth=(*it)->getNodalConnectivityLength();
- const int *curC=(*it)->_conn->begin();
- cPtr=std::transform(curC,curC+curConnLgth,cPtr,std::bind2nd(std::plus<int>(),offset));
+ mcIdType curConnLgth=(*it)->getNodalConnectivityLength();
+ const mcIdType *curC=(*it)->_conn->begin();
+ cPtr=std::transform(curC,curC+curConnLgth,cPtr,std::bind(std::plus<mcIdType>(),std::placeholders::_1,offset));
offset+=(*it)->getNumberOfNodes();
}
//
return ret.retn();
}
-MEDCouplingPointSet *MEDCoupling1SGTUMesh::buildPartOfMySelfKeepCoords(const int *begin, const int *end) const
+MEDCouplingPointSet *MEDCoupling1SGTUMesh::buildPartOfMySelfKeepCoords(const mcIdType *begin, const mcIdType *end) const
{
- int ncell=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName(),*_cm));
+ mcIdType ncell=getNumberOfCells();
+ MCAuto<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName(),*_cm));
ret->setCoords(_coords);
std::size_t nbOfElemsRet=std::distance(begin,end);
- const int *inConn=_conn->getConstPointer();
- int sz=getNumberOfNodesPerCell();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> connRet=DataArrayInt::New(); connRet->alloc((int)nbOfElemsRet*sz,1);
- int *connPtr=connRet->getPointer();
- for(const int *work=begin;work!=end;work++,connPtr+=sz)
+ const mcIdType *inConn=_conn->getConstPointer();
+ mcIdType sz=getNumberOfNodesPerCell();
+ MCAuto<DataArrayIdType> connRet=DataArrayIdType::New(); connRet->alloc(nbOfElemsRet*sz,1);
+ mcIdType *connPtr=connRet->getPointer();
+ for(const mcIdType *work=begin;work!=end;work++,connPtr+=sz)
{
if(*work>=0 && *work<ncell)
std::copy(inConn+(work[0])*sz,inConn+(work[0]+1)*sz,connPtr);
return ret.retn();
}
-MEDCouplingPointSet *MEDCoupling1SGTUMesh::buildPartOfMySelfKeepCoords2(int start, int end, int step) const
+MEDCouplingPointSet *MEDCoupling1SGTUMesh::buildPartOfMySelfKeepCoordsSlice(mcIdType start, mcIdType end, mcIdType step) const
{
- int ncell=getNumberOfCells();
- int nbOfElemsRet=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCoupling1SGTUMesh::buildPartOfMySelfKeepCoords2 : ");
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName(),*_cm));
+ mcIdType ncell=getNumberOfCells();
+ mcIdType nbOfElemsRet=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCoupling1SGTUMesh::buildPartOfMySelfKeepCoordsSlice : ");
+ MCAuto<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName(),*_cm));
ret->setCoords(_coords);
- const int *inConn=_conn->getConstPointer();
- int sz=getNumberOfNodesPerCell();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> connRet=DataArrayInt::New(); connRet->alloc((int)nbOfElemsRet*sz,1);
- int *connPtr=connRet->getPointer();
- int curId=start;
- for(int i=0;i<nbOfElemsRet;i++,connPtr+=sz,curId+=step)
+ const mcIdType *inConn=_conn->getConstPointer();
+ mcIdType sz=getNumberOfNodesPerCell();
+ MCAuto<DataArrayIdType> connRet=DataArrayIdType::New(); connRet->alloc(nbOfElemsRet*sz,1);
+ mcIdType *connPtr=connRet->getPointer();
+ mcIdType curId=start;
+ for(mcIdType i=0;i<nbOfElemsRet;i++,connPtr+=sz,curId+=step)
{
if(curId>=0 && curId<ncell)
std::copy(inConn+curId*sz,inConn+(curId+1)*sz,connPtr);
else
{
- std::ostringstream oss; oss << "MEDCoupling1SGTUMesh::buildPartOfMySelfKeepCoords2 : On pos #" << i << " input cell id =" << curId << " should be in [0," << ncell << ") !";
+ std::ostringstream oss; oss << "MEDCoupling1SGTUMesh::buildPartOfMySelfKeepCoordsSlice : On pos #" << i << " input cell id =" << curId << " should be in [0," << ncell << ") !";
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
}
void MEDCoupling1SGTUMesh::computeNodeIdsAlg(std::vector<bool>& nodeIdsInUse) const
{
- int sz((int)nodeIdsInUse.size());
- int nbCells(getNumberOfCells());
- int nbOfNodesPerCell(getNumberOfNodesPerCell());
- const int *w(_conn->begin());
- for(int i=0;i<nbCells;i++)
- for(int j=0;j<nbOfNodesPerCell;j++,w++)
- {
- if(*w>=0 && *w<sz)
- nodeIdsInUse[*w]=true;
- else
- {
- std::ostringstream oss; oss << "MEDCoupling1SGTUMesh::computeNodeIdsAlg : At cell #" << i << " presence of node id #" << *w << " should be in [0," << sz << ") !";
- throw INTERP_KERNEL::Exception(oss.str().c_str());
- }
- }
+ mcIdType sz(ToIdType(nodeIdsInUse.size()));
+ for(const mcIdType *conn=_conn->begin();conn!=_conn->end();conn++)
+ {
+ if(*conn>=0 && *conn<sz)
+ nodeIdsInUse[*conn]=true;
+ else
+ {
+ std::ostringstream oss; oss << "MEDCoupling1SGTUMesh::computeFetchedNodeIds : At pos #" << std::distance(_conn->begin(),conn) << " value is " << *conn << " must be in [0," << sz << ") !";
+ throw INTERP_KERNEL::Exception(oss.str().c_str());
+ }
+ }
}
-MEDCoupling1SGTUMesh *MEDCoupling1SGTUMesh::buildSetInstanceFromThis(int spaceDim) const
+MEDCoupling1SGTUMesh *MEDCoupling1SGTUMesh::buildSetInstanceFromThis(std::size_t spaceDim) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName(),*_cm));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp1;
- const DataArrayInt *nodalConn(_conn);
+ MCAuto<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName(),*_cm));
+ MCAuto<DataArrayIdType> tmp1;
+ const DataArrayIdType *nodalConn(_conn);
if(!nodalConn)
{
- tmp1=DataArrayInt::New(); tmp1->alloc(0,1);
+ tmp1=DataArrayIdType::New(); tmp1->alloc(0,1);
}
else
tmp1=_conn;
ret->_conn=tmp1;
if(!_coords)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coords=DataArrayDouble::New(); coords->alloc(0,spaceDim);
+ MCAuto<DataArrayDouble> coords=DataArrayDouble::New(); coords->alloc(0,spaceDim);
ret->setCoords(coords);
}
else
return ret.retn();
}
-DataArrayInt *MEDCoupling1SGTUMesh::simplexizePol0()
+DataArrayIdType *MEDCoupling1SGTUMesh::simplexizePol0()
{
- int nbOfCells=getNumberOfCells();
+ mcIdType nbOfCells=getNumberOfCells();
if(getCellModelEnum()!=INTERP_KERNEL::NORM_QUAD4)
- return DataArrayInt::Range(0,nbOfCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(2*3*nbOfCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(2*nbOfCells,1);
- const int *c(_conn->begin());
- int *retPtr(ret->getPointer()),*newConnPtr(newConn->getPointer());
- for(int i=0;i<nbOfCells;i++,c+=4,newConnPtr+=6,retPtr+=2)
+ return DataArrayIdType::Range(0,nbOfCells,1);
+ MCAuto<DataArrayIdType> newConn=DataArrayIdType::New(); newConn->alloc(2*3*nbOfCells,1);
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New(); ret->alloc(2*nbOfCells,1);
+ const mcIdType *c(_conn->begin());
+ mcIdType *retPtr(ret->getPointer()),*newConnPtr(newConn->getPointer());
+ for(mcIdType i=0;i<nbOfCells;i++,c+=4,newConnPtr+=6,retPtr+=2)
{
newConnPtr[0]=c[0]; newConnPtr[1]=c[1]; newConnPtr[2]=c[2];
newConnPtr[3]=c[0]; newConnPtr[4]=c[2]; newConnPtr[5]=c[3];
return ret.retn();
}
-DataArrayInt *MEDCoupling1SGTUMesh::simplexizePol1()
+DataArrayIdType *MEDCoupling1SGTUMesh::simplexizePol1()
{
- int nbOfCells=getNumberOfCells();
+ mcIdType nbOfCells=getNumberOfCells();
if(getCellModelEnum()!=INTERP_KERNEL::NORM_QUAD4)
- return DataArrayInt::Range(0,nbOfCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(2*3*nbOfCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(2*nbOfCells,1);
- const int *c(_conn->begin());
- int *retPtr(ret->getPointer()),*newConnPtr(newConn->getPointer());
- for(int i=0;i<nbOfCells;i++,c+=4,newConnPtr+=6,retPtr+=2)
+ return DataArrayIdType::Range(0,nbOfCells,1);
+ MCAuto<DataArrayIdType> newConn=DataArrayIdType::New(); newConn->alloc(2*3*nbOfCells,1);
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New(); ret->alloc(2*nbOfCells,1);
+ const mcIdType *c(_conn->begin());
+ mcIdType *retPtr(ret->getPointer()),*newConnPtr(newConn->getPointer());
+ for(mcIdType i=0;i<nbOfCells;i++,c+=4,newConnPtr+=6,retPtr+=2)
{
newConnPtr[0]=c[0]; newConnPtr[1]=c[1]; newConnPtr[2]=c[3];
newConnPtr[3]=c[1]; newConnPtr[4]=c[2]; newConnPtr[5]=c[3];
return ret.retn();
}
-DataArrayInt *MEDCoupling1SGTUMesh::simplexizePlanarFace5()
+DataArrayIdType *MEDCoupling1SGTUMesh::simplexizePlanarFace5()
{
- int nbOfCells=getNumberOfCells();
+ mcIdType nbOfCells=getNumberOfCells();
if(getCellModelEnum()!=INTERP_KERNEL::NORM_HEXA8)
- return DataArrayInt::Range(0,nbOfCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(5*4*nbOfCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(5*nbOfCells,1);
- const int *c(_conn->begin());
- int *retPtr(ret->getPointer()),*newConnPtr(newConn->getPointer());
- for(int i=0;i<nbOfCells;i++,c+=8,newConnPtr+=20,retPtr+=5)
+ return DataArrayIdType::Range(0,nbOfCells,1);
+ MCAuto<DataArrayIdType> newConn=DataArrayIdType::New(); newConn->alloc(5*4*nbOfCells,1);
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New(); ret->alloc(5*nbOfCells,1);
+ const mcIdType *c(_conn->begin());
+ mcIdType *retPtr(ret->getPointer()),*newConnPtr(newConn->getPointer());
+ for(mcIdType i=0;i<nbOfCells;i++,c+=8,newConnPtr+=20,retPtr+=5)
{
for(int j=0;j<20;j++)
newConnPtr[j]=c[INTERP_KERNEL::SPLIT_NODES_5_WO[j]];
return ret.retn();
}
-DataArrayInt *MEDCoupling1SGTUMesh::simplexizePlanarFace6()
+DataArrayIdType *MEDCoupling1SGTUMesh::simplexizePlanarFace6()
{
- int nbOfCells=getNumberOfCells();
+ mcIdType nbOfCells=getNumberOfCells();
if(getCellModelEnum()!=INTERP_KERNEL::NORM_HEXA8)
- return DataArrayInt::Range(0,nbOfCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New(); newConn->alloc(6*4*nbOfCells,1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(6*nbOfCells,1);
- const int *c(_conn->begin());
- int *retPtr(ret->getPointer()),*newConnPtr(newConn->getPointer());
- for(int i=0;i<nbOfCells;i++,c+=8,newConnPtr+=24,retPtr+=6)
+ return DataArrayIdType::Range(0,nbOfCells,1);
+ MCAuto<DataArrayIdType> newConn=DataArrayIdType::New(); newConn->alloc(6*4*nbOfCells,1);
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New(); ret->alloc(6*nbOfCells,1);
+ const mcIdType *c(_conn->begin());
+ mcIdType *retPtr(ret->getPointer()),*newConnPtr(newConn->getPointer());
+ for(mcIdType i=0;i<nbOfCells;i++,c+=8,newConnPtr+=24,retPtr+=6)
{
for(int j=0;j<24;j++)
newConnPtr[j]=c[INTERP_KERNEL::SPLIT_NODES_6_WO[j]];
void MEDCoupling1SGTUMesh::reprQuickOverview(std::ostream& stream) const
{
- stream << "MEDCoupling1SGTUMesh C++ instance at " << this << ". Type=" << _cm->getRepr() << ". Name : \"" << getName() << "\".";
+ stream << "MEDCoupling1SGTUMesh C++ instance at " << this << ". Type=";
+ if(!_cm)
+ {
+ stream << "Not set";
+ return ;
+ }
+ stream << _cm->getRepr() << ". Name : \"" << getName() << "\".";
stream << " Mesh dimension : " << getMeshDimension() << ".";
if(!_coords)
{ stream << " No coordinates set !"; return ; }
{ stream << " Coordinates set but not allocated !"; return ; }
stream << " Space dimension : " << _coords->getNumberOfComponents() << "." << std::endl;
stream << "Number of nodes : " << _coords->getNumberOfTuples() << ".";
- if(!(const DataArrayInt *)_conn)
+ if(!(const DataArrayIdType *)_conn)
{ stream << std::endl << "Nodal connectivity NOT set !"; return ; }
if(_conn->isAllocated())
{
void MEDCoupling1SGTUMesh::checkFullyDefined() const
{
- if(!((const DataArrayInt *)_conn) || !((const DataArrayDouble *)_coords))
+ if(!((const DataArrayIdType *)_conn) || !((const DataArrayDouble *)_coords))
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::checkFullyDefined : part of this is not fully defined.");
}
/*!
* First step of unserialization process.
*/
-bool MEDCoupling1SGTUMesh::isEmptyMesh(const std::vector<int>& tinyInfo) const
+bool MEDCoupling1SGTUMesh::isEmptyMesh(const std::vector<mcIdType>& tinyInfo) const
{
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::isEmptyMesh : not implemented yet !");
}
-void MEDCoupling1SGTUMesh::getTinySerializationInformation(std::vector<double>& tinyInfoD, std::vector<int>& tinyInfo, std::vector<std::string>& littleStrings) const
+void MEDCoupling1SGTUMesh::getTinySerializationInformation(std::vector<double>& tinyInfoD, std::vector<mcIdType>& tinyInfo, std::vector<std::string>& littleStrings) const
{
int it,order;
double time=getTime(it,order);
std::vector<std::string> littleStrings2,littleStrings3;
if((const DataArrayDouble *)_coords)
_coords->getTinySerializationStrInformation(littleStrings2);
- if((const DataArrayInt *)_conn)
+ if((const DataArrayIdType *)_conn)
_conn->getTinySerializationStrInformation(littleStrings3);
- int sz0((int)littleStrings2.size()),sz1((int)littleStrings3.size());
+ mcIdType sz0(ToIdType(littleStrings2.size())),sz1(ToIdType(littleStrings3.size()));
littleStrings.insert(littleStrings.end(),littleStrings2.begin(),littleStrings2.end());
littleStrings.insert(littleStrings.end(),littleStrings3.begin(),littleStrings3.end());
//
tinyInfo.push_back(getCellModelEnum());
tinyInfo.push_back(it);
tinyInfo.push_back(order);
- std::vector<int> tinyInfo2,tinyInfo3;
+ std::vector<mcIdType> tinyInfo2,tinyInfo3;
if((const DataArrayDouble *)_coords)
_coords->getTinySerializationIntInformation(tinyInfo2);
- if((const DataArrayInt *)_conn)
+ if((const DataArrayIdType *)_conn)
_conn->getTinySerializationIntInformation(tinyInfo3);
- int sz2((int)tinyInfo2.size()),sz3((int)tinyInfo3.size());
+ mcIdType sz2(ToIdType(tinyInfo2.size())),sz3(ToIdType(tinyInfo3.size()));
tinyInfo.push_back(sz0); tinyInfo.push_back(sz1); tinyInfo.push_back(sz2); tinyInfo.push_back(sz3);
tinyInfo.insert(tinyInfo.end(),tinyInfo2.begin(),tinyInfo2.end());
tinyInfo.insert(tinyInfo.end(),tinyInfo3.begin(),tinyInfo3.end());
tinyInfoD.push_back(time);
}
-void MEDCoupling1SGTUMesh::resizeForUnserialization(const std::vector<int>& tinyInfo, DataArrayInt *a1, DataArrayDouble *a2, std::vector<std::string>& littleStrings) const
+void MEDCoupling1SGTUMesh::resizeForUnserialization(const std::vector<mcIdType>& tinyInfo, DataArrayIdType *a1, DataArrayDouble *a2, std::vector<std::string>& littleStrings) const
{
- std::vector<int> tinyInfo2(tinyInfo.begin()+7,tinyInfo.begin()+7+tinyInfo[5]);
- std::vector<int> tinyInfo1(tinyInfo.begin()+7+tinyInfo[5],tinyInfo.begin()+7+tinyInfo[5]+tinyInfo[6]);
+ std::vector<mcIdType> tinyInfo2(tinyInfo.begin()+7,tinyInfo.begin()+7+tinyInfo[5]);
+ std::vector<mcIdType> tinyInfo1(tinyInfo.begin()+7+tinyInfo[5],tinyInfo.begin()+7+tinyInfo[5]+tinyInfo[6]);
a1->resizeForUnserialization(tinyInfo1);
a2->resizeForUnserialization(tinyInfo2);
}
-void MEDCoupling1SGTUMesh::serialize(DataArrayInt *&a1, DataArrayDouble *&a2) const
+void MEDCoupling1SGTUMesh::serialize(DataArrayIdType *&a1, DataArrayDouble *&a2) const
{
- int sz(0);
- if((const DataArrayInt *)_conn)
+ mcIdType sz(0);
+ if((const DataArrayIdType *)_conn)
if(_conn->isAllocated())
sz=_conn->getNbOfElems();
- a1=DataArrayInt::New();
+ a1=DataArrayIdType::New();
a1->alloc(sz,1);
- if(sz!=0 && (const DataArrayInt *)_conn)
+ if(sz!=0 && (const DataArrayIdType *)_conn)
std::copy(_conn->begin(),_conn->end(),a1->getPointer());
sz=0;
if((const DataArrayDouble *)_coords)
std::copy(_coords->begin(),_coords->end(),a2->getPointer());
}
-void MEDCoupling1SGTUMesh::unserialization(const std::vector<double>& tinyInfoD, const std::vector<int>& tinyInfo, const DataArrayInt *a1, DataArrayDouble *a2,
+void MEDCoupling1SGTUMesh::unserialization(const std::vector<double>& tinyInfoD, const std::vector<mcIdType>& tinyInfo, const DataArrayIdType *a1, DataArrayDouble *a2,
const std::vector<std::string>& littleStrings)
{
INTERP_KERNEL::NormalizedCellType gt((INTERP_KERNEL::NormalizedCellType)tinyInfo[0]);
setName(littleStrings[0]);
setDescription(littleStrings[1]);
setTimeUnit(littleStrings[2]);
- setTime(tinyInfoD[0],tinyInfo[1],tinyInfo[2]);
- int sz0(tinyInfo[3]),sz1(tinyInfo[4]),sz2(tinyInfo[5]),sz3(tinyInfo[6]);
+ setTime(tinyInfoD[0],FromIdType<int>(tinyInfo[1]),FromIdType<int>(tinyInfo[2]));
+ mcIdType sz0(tinyInfo[3]),sz1(tinyInfo[4]),sz2(tinyInfo[5]),sz3(tinyInfo[6]);
//
_coords=DataArrayDouble::New();
- std::vector<int> tinyInfo2(tinyInfo.begin()+7,tinyInfo.begin()+7+sz2);
+ std::vector<mcIdType> tinyInfo2(tinyInfo.begin()+7,tinyInfo.begin()+7+sz2);
_coords->resizeForUnserialization(tinyInfo2);
std::copy(a2->begin(),a2->end(),_coords->getPointer());
- _conn=DataArrayInt::New();
- std::vector<int> tinyInfo3(tinyInfo.begin()+7+sz2,tinyInfo.begin()+7+sz2+sz3);
+ _conn=DataArrayIdType::New();
+ std::vector<mcIdType> tinyInfo3(tinyInfo.begin()+7+sz2,tinyInfo.begin()+7+sz2+sz3);
_conn->resizeForUnserialization(tinyInfo3);
std::copy(a1->begin(),a1->end(),_conn->getPointer());
std::vector<std::string> littleStrings2(littleStrings.begin()+3,littleStrings.begin()+3+sz0);
const MEDCoupling1SGTUMesh *otherC=dynamic_cast<const MEDCoupling1SGTUMesh *>(other);
if(!otherC)
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::checkFastEquivalWith : Two meshes are not unstructured with single static geometric type !");
- const DataArrayInt *c1(_conn),*c2(otherC->_conn);
+ const DataArrayIdType *c1(_conn),*c2(otherC->_conn);
if(c1==c2)
return;
if(!c1 || !c2)
return Merge1SGTUMeshesOnSameCoords(ms);
}
-void MEDCoupling1SGTUMesh::getReverseNodalConnectivity(DataArrayInt *revNodal, DataArrayInt *revNodalIndx) const
+void MEDCoupling1SGTUMesh::getReverseNodalConnectivity(DataArrayIdType *revNodal, DataArrayIdType *revNodalIndx) const
{
checkFullyDefined();
- int nbOfNodes=getNumberOfNodes();
- int *revNodalIndxPtr=(int *)malloc((nbOfNodes+1)*sizeof(int));
- revNodalIndx->useArray(revNodalIndxPtr,true,C_DEALLOC,nbOfNodes+1,1);
+ mcIdType nbOfNodes=getNumberOfNodes();
+ mcIdType *revNodalIndxPtr=(mcIdType *)malloc((nbOfNodes+1)*sizeof(mcIdType));
+ revNodalIndx->useArray(revNodalIndxPtr,true,DeallocType::C_DEALLOC,nbOfNodes+1,1);
std::fill(revNodalIndxPtr,revNodalIndxPtr+nbOfNodes+1,0);
- const int *conn=_conn->begin();
- int nbOfCells=getNumberOfCells();
- int nbOfEltsInRevNodal=0;
- int nbOfNodesPerCell=getNumberOfNodesPerCell();
- for(int eltId=0;eltId<nbOfCells;eltId++)
+ const mcIdType *conn=_conn->begin();
+ mcIdType nbOfCells=getNumberOfCells();
+ mcIdType nbOfEltsInRevNodal=0;
+ mcIdType nbOfNodesPerCell=getNumberOfNodesPerCell();
+ for(mcIdType eltId=0;eltId<nbOfCells;eltId++)
{
for(int j=0;j<nbOfNodesPerCell;j++,conn++)
{
}
}
}
- std::transform(revNodalIndxPtr+1,revNodalIndxPtr+nbOfNodes+1,revNodalIndxPtr,revNodalIndxPtr+1,std::plus<int>());
+ std::transform(revNodalIndxPtr+1,revNodalIndxPtr+nbOfNodes+1,revNodalIndxPtr,revNodalIndxPtr+1,std::plus<mcIdType>());
conn=_conn->begin();
- int *revNodalPtr=(int *)malloc((nbOfEltsInRevNodal)*sizeof(int));
- revNodal->useArray(revNodalPtr,true,C_DEALLOC,nbOfEltsInRevNodal,1);
+ mcIdType *revNodalPtr=(mcIdType *)malloc(nbOfEltsInRevNodal*sizeof(mcIdType));
+ revNodal->useArray(revNodalPtr,true,DeallocType::C_DEALLOC,nbOfEltsInRevNodal,1);
std::fill(revNodalPtr,revNodalPtr+nbOfEltsInRevNodal,-1);
- for(int eltId=0;eltId<nbOfCells;eltId++)
+ for(mcIdType eltId=0;eltId<nbOfCells;eltId++)
{
for(int j=0;j<nbOfNodesPerCell;j++,conn++)
{
- *std::find_if(revNodalPtr+revNodalIndxPtr[*conn],revNodalPtr+revNodalIndxPtr[*conn+1],std::bind2nd(std::equal_to<int>(),-1))=eltId;
+ *std::find_if(revNodalPtr+revNodalIndxPtr[*conn],revNodalPtr+revNodalIndxPtr[*conn+1],std::bind(std::equal_to<mcIdType>(),std::placeholders::_1,-1))=eltId;
}
}
}
/*!
* Use \a nodalConn array as nodal connectivity of \a this. The input \a nodalConn pointer can be null.
*/
-void MEDCoupling1SGTUMesh::setNodalConnectivity(DataArrayInt *nodalConn)
+void MEDCoupling1SGTUMesh::setNodalConnectivity(DataArrayIdType *nodalConn)
{
if(nodalConn)
nodalConn->incrRef();
}
/*!
- * \return DataArrayInt * - the internal reference to the nodal connectivity. The caller is not reponsible to deallocate it.
+ * \return DataArrayIdType * - the internal reference to the nodal connectivity. The caller is not responsible to deallocate it.
*/
-DataArrayInt *MEDCoupling1SGTUMesh::getNodalConnectivity() const
+DataArrayIdType *MEDCoupling1SGTUMesh::getNodalConnectivity() const
{
- const DataArrayInt *ret(_conn);
- return const_cast<DataArrayInt *>(ret);
+ const DataArrayIdType *ret(_conn);
+ return const_cast<DataArrayIdType *>(ret);
}
/*!
* Allocates memory to store an estimation of the given number of cells. Closer is the estimation to the number of cells effectively inserted,
* less will be the needs to realloc. If the number of cells to be inserted is not known simply put 0 to this parameter.
- * If a nodal connectivity previouly existed before the call of this method, it will be reset.
+ * If a nodal connectivity previously existed before the call of this method, it will be reset.
*
* \param [in] nbOfCells - estimation of the number of cell \a this mesh will contain.
*/
-void MEDCoupling1SGTUMesh::allocateCells(int nbOfCells)
+void MEDCoupling1SGTUMesh::allocateCells(mcIdType nbOfCells)
{
if(nbOfCells<0)
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::allocateCells : the input number of cells should be >= 0 !");
- _conn=DataArrayInt::New();
+ _conn=DataArrayIdType::New();
_conn->reserve(getNumberOfNodesPerCell()*nbOfCells);
declareAsNew();
}
* \param [in] nodalConnOfCellEnd - the end (excluded) of nodal connectivity of the cell to add.
* \throw If the length of the input nodal connectivity array of the cell to add is not equal to number of nodes per cell relative to the unique geometric type
* attached to \a this.
- * \thow If the nodal connectivity array in \a this is null (call MEDCoupling1SGTUMesh::allocateCells before).
+ * \throw If the nodal connectivity array in \a this is null (call MEDCoupling1SGTUMesh::allocateCells before).
*/
-void MEDCoupling1SGTUMesh::insertNextCell(const int *nodalConnOfCellBg, const int *nodalConnOfCellEnd)
+void MEDCoupling1SGTUMesh::insertNextCell(const mcIdType *nodalConnOfCellBg, const mcIdType *nodalConnOfCellEnd)
{
- int sz=(int)std::distance(nodalConnOfCellBg,nodalConnOfCellEnd);
- int ref=getNumberOfNodesPerCell();
+ mcIdType sz=ToIdType(std::distance(nodalConnOfCellBg,nodalConnOfCellEnd));
+ mcIdType ref=getNumberOfNodesPerCell();
if(sz==ref)
{
- DataArrayInt *c(_conn);
+ DataArrayIdType *c(_conn);
if(c)
c->pushBackValsSilent(nodalConnOfCellBg,nodalConnOfCellEnd);
else
const INTERP_KERNEL::CellModel& cm(getCellModel());
if(cm.getEnum()!=INTERP_KERNEL::NORM_HEXA8)
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::explodeEachHexa8To6Quad4 : this method can be applied only on HEXA8 mesh !");
- int nbHexa8(getNumberOfCells());
- const int *inConnPtr(getNodalConnectivity()->begin());
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(MEDCoupling1SGTUMesh::New(getName(),INTERP_KERNEL::NORM_QUAD4));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c(DataArrayInt::New()); c->alloc(nbHexa8*6*4,1);
- int *cPtr(c->getPointer());
- for(int i=0;i<nbHexa8;i++,inConnPtr+=8)
+ mcIdType nbHexa8=getNumberOfCells();
+ const mcIdType *inConnPtr(getNodalConnectivity()->begin());
+ MCAuto<MEDCoupling1SGTUMesh> ret(MEDCoupling1SGTUMesh::New(getName(),INTERP_KERNEL::NORM_QUAD4));
+ MCAuto<DataArrayIdType> c(DataArrayIdType::New()); c->alloc(nbHexa8*6*4,1);
+ mcIdType *cPtr(c->getPointer());
+ for(mcIdType i=0;i<nbHexa8;i++,inConnPtr+=8)
{
for(int j=0;j<6;j++,cPtr+=4)
cm.fillSonCellNodalConnectivity(j,inConnPtr,cPtr);
* \param [out] nodePerm the permutation array of size \c this->getNumberOfNodes()
* \return MEDCouplingCMesh * - a newly allocated mesh that is the result of the structurization of \a this.
*/
-MEDCouplingCMesh *MEDCoupling1SGTUMesh::structurizeMe(DataArrayInt *& cellPerm, DataArrayInt *& nodePerm, double eps) const
+MEDCouplingCMesh *MEDCoupling1SGTUMesh::structurizeMe(DataArrayIdType *& cellPerm, DataArrayIdType *& nodePerm, double eps) const
{
- checkCoherency();
- int spaceDim(getSpaceDimension()),meshDim(getMeshDimension()),nbNodes(getNumberOfNodes());
+ checkConsistencyLight();
+ int spaceDim(getSpaceDimension()),meshDim(getMeshDimension()); mcIdType nbNodes(getNumberOfNodes());
if(MEDCouplingStructuredMesh::GetGeoTypeGivenMeshDimension(meshDim)!=getCellModelEnum())
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::structurizeMe : the unique geo type in this is not compatible with the geometric type regarding mesh dimension !");
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingCMesh> cm(MEDCouplingCMesh::New());
+ MCAuto<MEDCouplingCMesh> cm(MEDCouplingCMesh::New());
for(int i=0;i<spaceDim;i++)
{
- std::vector<int> tmp(1,i);
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> elt(static_cast<DataArrayDouble*>(getCoords()->keepSelectedComponents(tmp)));
+ std::vector<std::size_t> tmp(1,i);
+ MCAuto<DataArrayDouble> elt(static_cast<DataArrayDouble*>(getCoords()->keepSelectedComponents(tmp)));
elt=elt->getDifferentValues(eps);
elt->sort(true);
cm->setCoordsAt(i,elt);
try
{ cm->copyTinyInfoFrom(this); }
catch(INTERP_KERNEL::Exception&) { }
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> um(cm->buildUnstructured()),self(buildUnstructured());
+ MCAuto<MEDCouplingUMesh> um(cm->buildUnstructured()),self(buildUnstructured());
self->checkGeoEquivalWith(um,12,eps,cellPerm,nodePerm);
return cm.retn();
}
/// @cond INTERNAL
-bool UpdateHexa8Cell(int validAxis, int neighId, const int *validConnQuad4NeighSide, int *allFacesNodalConn, int *myNeighbours)
+bool UpdateHexa8Cell(int validAxis, mcIdType neighId, const mcIdType *validConnQuad4NeighSide, mcIdType *allFacesNodalConn, mcIdType *myNeighbours)
{
static const int TAB[48]={
0,1,2,3,4,5,6,7,//0
static const int TAB2[6]={0,0,3,3,3,3};
if(myNeighbours[validAxis]==neighId && allFacesNodalConn[4*validAxis+0]==validConnQuad4NeighSide[TAB2[validAxis]])
return true;
- int oldAxis((int)std::distance(myNeighbours,std::find(myNeighbours,myNeighbours+6,neighId)));
+ mcIdType oldAxis(ToIdType(std::distance(myNeighbours,std::find(myNeighbours,myNeighbours+6,neighId))));
std::size_t pos(std::distance(MEDCoupling1SGTUMesh::HEXA8_FACE_PAIRS,std::find(MEDCoupling1SGTUMesh::HEXA8_FACE_PAIRS,MEDCoupling1SGTUMesh::HEXA8_FACE_PAIRS+6,oldAxis)));
std::size_t pos0(pos/2),pos1(pos%2);
int oldAxisOpp(MEDCoupling1SGTUMesh::HEXA8_FACE_PAIRS[2*pos0+(pos1+1)%2]);
- int oldConn[8],myConn2[8]={-1,-1,-1,-1,-1,-1,-1,-1},myConn[8],edgeConn[2],allFacesTmp[24],neighTmp[6];
+ mcIdType oldConn[8],myConn2[8]={-1,-1,-1,-1,-1,-1,-1,-1},myConn[8],edgeConn[2],allFacesTmp[24],neighTmp[6];
oldConn[0]=allFacesNodalConn[0]; oldConn[1]=allFacesNodalConn[1]; oldConn[2]=allFacesNodalConn[2]; oldConn[3]=allFacesNodalConn[3];
oldConn[4]=allFacesNodalConn[4]; oldConn[5]=allFacesNodalConn[7]; oldConn[6]=allFacesNodalConn[6]; oldConn[7]=allFacesNodalConn[5];
const INTERP_KERNEL::CellModel& cm(INTERP_KERNEL::CellModel::GetCellModel(INTERP_KERNEL::NORM_HEXA8));
myConn2[i]=validConnQuad4NeighSide[(4-i+TAB2[validAxis])%4];
for(int i=0;i<4;i++)
{
- int nodeId(myConn2[i]);//the node id for which the opposite one will be found
+ mcIdType nodeId(myConn2[i]);//the node id for which the opposite one will be found
bool found(false);
INTERP_KERNEL::NormalizedCellType typeOfSon;
for(int j=0;j<12 && !found;j++)
for(int i=0;i<6;i++)
{
cm.fillSonCellNodalConnectivity(i,myConn,allFacesTmp+4*i);
- std::set<int> s(allFacesTmp+4*i,allFacesTmp+4*i+4);
+ std::set<mcIdType> s(allFacesTmp+4*i,allFacesTmp+4*i+4);
bool found(false);
for(int j=0;j<6 && !found;j++)
{
- std::set<int> s1(allFacesNodalConn+4*j,allFacesNodalConn+4*j+4);
+ std::set<mcIdType> s1(allFacesNodalConn+4*j,allFacesNodalConn+4*j+4);
if(s==s1)
{
neighTmp[i]=myNeighbours[j];
* This method expects the \a this contains NORM_HEXA8 cells only. This method will sort each cells in \a this so that their numbering was
* homogeneous. If it succeeds the result of MEDCouplingUMesh::tetrahedrize will return a conform mesh.
*
- * \return DataArrayInt * - a newly allocated array (to be managed by the caller) containing renumbered cell ids.
+ * \return DataArrayIdType * - a newly allocated array (to be managed by the caller) containing renumbered cell ids.
*
* \throw If \a this is not a mesh containing only NORM_HEXA8 cells.
* \throw If \a this is not properly allocated.
* \sa MEDCouplingUMesh::tetrahedrize, MEDCouplingUMesh::simplexize.
*/
-DataArrayInt *MEDCoupling1SGTUMesh::sortHexa8EachOther()
+DataArrayIdType *MEDCoupling1SGTUMesh::sortHexa8EachOther()
{
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> quads(explodeEachHexa8To6Quad4());//checks that only hexa8
- int nbHexa8(getNumberOfCells()),*cQuads(quads->getNodalConnectivity()->getPointer());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> neighOfQuads(DataArrayInt::New()); neighOfQuads->alloc(nbHexa8*6,1); neighOfQuads->fillWithValue(-1);
- int *ptNeigh(neighOfQuads->getPointer());
+ MCAuto<MEDCoupling1SGTUMesh> quads(explodeEachHexa8To6Quad4());//checks that only hexa8
+ mcIdType nbHexa8=getNumberOfCells();
+ mcIdType *cQuads(quads->getNodalConnectivity()->getPointer());
+ MCAuto<DataArrayIdType> neighOfQuads(DataArrayIdType::New()); neighOfQuads->alloc(nbHexa8*6,1); neighOfQuads->fillWithValue(-1);
+ mcIdType *ptNeigh(neighOfQuads->getPointer());
{//neighOfQuads tells for each face of each Quad8 which cell (if!=-1) is connected to this face.
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> quadsTmp(quads->buildUnstructured());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ccSafe,cciSafe;
- DataArrayInt *cc(0),*cci(0);
+ MCAuto<MEDCouplingUMesh> quadsTmp(quads->buildUnstructured());
+ MCAuto<DataArrayIdType> ccSafe,cciSafe;
+ DataArrayIdType *cc(0),*cci(0);
quadsTmp->findCommonCells(3,0,cc,cci);
ccSafe=cc; cciSafe=cci;
- const int *ccPtr(ccSafe->begin()),nbOfPair(cci->getNumberOfTuples()-1);
- for(int i=0;i<nbOfPair;i++)
+ const mcIdType *ccPtr(ccSafe->begin());
+ mcIdType nbOfPair=cci->getNumberOfTuples()-1;
+ for(mcIdType i=0;i<nbOfPair;i++)
{ ptNeigh[ccPtr[2*i+0]]=ccPtr[2*i+1]/6; ptNeigh[ccPtr[2*i+1]]=ccPtr[2*i+0]/6; }
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(0,1);
+ MCAuto<DataArrayIdType> ret(DataArrayIdType::New()); ret->alloc(0,1);
std::vector<bool> fetched(nbHexa8,false);
std::vector<bool>::iterator it(std::find(fetched.begin(),fetched.end(),false));
while(it!=fetched.end())//it will turns as time as number of connected zones
{
- int cellId((int)std::distance(fetched.begin(),it));//it is the seed of the connected zone.
- std::set<int> s; s.insert(cellId);//s contains already organized.
+ mcIdType cellId(ToIdType(std::distance(fetched.begin(),it)));//it is the seed of the connected zone.
+ std::set<mcIdType> s; s.insert(cellId);//s contains already organized.
while(!s.empty())
{
- std::set<int> sNext;
- for(std::set<int>::const_iterator it0=s.begin();it0!=s.end();it0++)
+ std::set<mcIdType> sNext;
+ for(std::set<mcIdType>::const_iterator it0=s.begin();it0!=s.end();it0++)
{
fetched[*it0]=true;
- int *myNeighb(ptNeigh+6*(*it0));
+ mcIdType *myNeighb(ptNeigh+6*(*it0));
for(int i=0;i<6;i++)
{
if(myNeighb[i]!=-1 && !fetched[myNeighb[i]])
}
if(!ret->empty())
{
- int *conn(getNodalConnectivity()->getPointer());
- for(const int *pt=ret->begin();pt!=ret->end();pt++)
+ mcIdType *conn(getNodalConnectivity()->getPointer());
+ for(const mcIdType *pt=ret->begin();pt!=ret->end();pt++)
{
- int cellId(*pt);
+ mcIdType cellId(*pt);
conn[8*cellId+0]=cQuads[24*cellId+0]; conn[8*cellId+1]=cQuads[24*cellId+1]; conn[8*cellId+2]=cQuads[24*cellId+2]; conn[8*cellId+3]=cQuads[24*cellId+3];
conn[8*cellId+4]=cQuads[24*cellId+4]; conn[8*cellId+5]=cQuads[24*cellId+7]; conn[8*cellId+6]=cQuads[24*cellId+6]; conn[8*cellId+7]=cQuads[24*cellId+5];
}
if(getCellModelEnum()!=INTERP_KERNEL::NORM_TETRA4)
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::computeDualMesh3D : only TETRA4 supported !");
checkFullyDefined();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> thisu(buildUnstructured());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revNodArr(DataArrayInt::New()),revNodIArr(DataArrayInt::New());
+ MCAuto<MEDCouplingUMesh> thisu(buildUnstructured());
+ MCAuto<DataArrayIdType> revNodArr(DataArrayIdType::New()),revNodIArr(DataArrayIdType::New());
thisu->getReverseNodalConnectivity(revNodArr,revNodIArr);
- const int *revNod(revNodArr->begin()),*revNodI(revNodIArr->begin()),*nodal(_conn->begin());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> d1Arr(DataArrayInt::New()),di1Arr(DataArrayInt::New()),rd1Arr(DataArrayInt::New()),rdi1Arr(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> edges(thisu->explode3DMeshTo1D(d1Arr,di1Arr,rd1Arr,rdi1Arr));
- const int *d1(d1Arr->begin());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> d2Arr(DataArrayInt::New()),di2Arr(DataArrayInt::New()),rd2Arr(DataArrayInt::New()),rdi2Arr(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> faces(thisu->buildDescendingConnectivity(d2Arr,di2Arr,rd2Arr,rdi2Arr)); thisu=0;
- const int *d2(d2Arr->begin()),*rdi2(rdi2Arr->begin());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> edgesBaryArr(edges->getBarycenterAndOwner()),facesBaryArr(faces->getBarycenterAndOwner()),baryArr(getBarycenterAndOwner());
- const int nbOfNodes(getNumberOfNodes()),offset0(nbOfNodes+faces->getNumberOfCells()),offset1(offset0+edges->getNumberOfCells());
+ const mcIdType *revNod(revNodArr->begin()),*revNodI(revNodIArr->begin()),*nodal(_conn->begin());
+ MCAuto<DataArrayIdType> d1Arr(DataArrayIdType::New()),di1Arr(DataArrayIdType::New()),rd1Arr(DataArrayIdType::New()),rdi1Arr(DataArrayIdType::New());
+ MCAuto<MEDCouplingUMesh> edges(thisu->explode3DMeshTo1D(d1Arr,di1Arr,rd1Arr,rdi1Arr));
+ const mcIdType *d1(d1Arr->begin());
+ MCAuto<DataArrayIdType> d2Arr(DataArrayIdType::New()),di2Arr(DataArrayIdType::New()),rd2Arr(DataArrayIdType::New()),rdi2Arr(DataArrayIdType::New());
+ MCAuto<MEDCouplingUMesh> faces(thisu->buildDescendingConnectivity(d2Arr,di2Arr,rd2Arr,rdi2Arr)); thisu=0;
+ const mcIdType *d2(d2Arr->begin()),*rdi2(rdi2Arr->begin());
+ MCAuto<DataArrayDouble> edgesBaryArr(edges->computeCellCenterOfMass()),facesBaryArr(faces->computeCellCenterOfMass()),baryArr(computeCellCenterOfMass());
+ const mcIdType nbOfNodes(getNumberOfNodes());
+ const mcIdType offset0=nbOfNodes+faces->getNumberOfCells();
+ const mcIdType offset1=offset0+edges->getNumberOfCells();
edges=0; faces=0;
std::vector<const DataArrayDouble *> v(4); v[0]=getCoords(); v[1]=facesBaryArr; v[2]=edgesBaryArr; v[3]=baryArr;
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> zeArr(DataArrayDouble::Aggregate(v)); baryArr=0; edgesBaryArr=0; facesBaryArr=0;
+ MCAuto<DataArrayDouble> zeArr(DataArrayDouble::Aggregate(v)); baryArr=0; edgesBaryArr=0; facesBaryArr=0;
std::string name("DualOf_"); name+=getName();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(name,INTERP_KERNEL::NORM_POLYHED)); ret->setCoords(zeArr);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cArr(DataArrayInt::New()),ciArr(DataArrayInt::New()); ciArr->alloc(nbOfNodes+1,1); ciArr->setIJ(0,0,0); cArr->alloc(0,1);
- for(int i=0;i<nbOfNodes;i++,revNodI++)
+ MCAuto<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(name,INTERP_KERNEL::NORM_POLYHED)); ret->setCoords(zeArr);
+ MCAuto<DataArrayIdType> cArr(DataArrayIdType::New()),ciArr(DataArrayIdType::New()); ciArr->alloc(nbOfNodes+1,1); ciArr->setIJ(0,0,0); cArr->alloc(0,1);
+ for(mcIdType i=0;i<nbOfNodes;i++,revNodI++)
{
- int nbOfCellsSharingNode(revNodI[1]-revNodI[0]);
+ mcIdType nbOfCellsSharingNode(revNodI[1]-revNodI[0]);
if(nbOfCellsSharingNode==0)
{
std::ostringstream oss; oss << "MEDCoupling1SGTUMesh::computeDualMesh3D : Node #" << i << " is orphan !";
}
for(int j=0;j<nbOfCellsSharingNode;j++)
{
- int curCellId(revNod[revNodI[0]+j]);
- const int *connOfCurCell(nodal+4*curCellId);
+ mcIdType curCellId(revNod[revNodI[0]+j]);
+ const mcIdType *connOfCurCell(nodal+4*curCellId);
std::size_t nodePosInCurCell(std::distance(connOfCurCell,std::find(connOfCurCell,connOfCurCell+4,i)));
if(j!=0) cArr->pushBackSilent(-1);
- int tmp[14];
+ mcIdType tmp[14];
//
tmp[0]=d1[6*curCellId+DUAL_TETRA_0[nodePosInCurCell*9+0]-4]+offset0; tmp[1]=d2[4*curCellId+DUAL_TETRA_0[nodePosInCurCell*9+1]]+nbOfNodes;
tmp[2]=curCellId+offset1; tmp[3]=d2[4*curCellId+DUAL_TETRA_0[nodePosInCurCell*9+2]]+nbOfNodes;
{
if(FACEID_NOT_SH_NODE[nodePosInCurCell]!=k)
{
- const int *faceId(d2+4*curCellId+k);
+ const mcIdType *faceId(d2+4*curCellId+k);
if(rdi2[*faceId+1]-rdi2[*faceId]==1)
{
- int tmp2[5]; tmp2[0]=-1; tmp2[1]=i;
+ mcIdType tmp2[5]; tmp2[0]=-1; tmp2[1]=i;
tmp2[2]=d1[6*curCellId+DUAL_TETRA_1[9*nodePosInCurCell+3*kk+0]-8]+offset0;
tmp2[3]=d2[4*curCellId+DUAL_TETRA_1[9*nodePosInCurCell+3*kk+1]-4]+nbOfNodes;
tmp2[4]=d1[6*curCellId+DUAL_TETRA_1[9*nodePosInCurCell+3*kk+2]-8]+offset0;
if(getCellModelEnum()!=INTERP_KERNEL::NORM_TRI3)
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::computeDualMesh2D : only TRI3 supported !");
checkFullyDefined();
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> thisu(buildUnstructured());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> revNodArr(DataArrayInt::New()),revNodIArr(DataArrayInt::New());
+ MCAuto<MEDCouplingUMesh> thisu(buildUnstructured());
+ MCAuto<DataArrayIdType> revNodArr(DataArrayIdType::New()),revNodIArr(DataArrayIdType::New());
thisu->getReverseNodalConnectivity(revNodArr,revNodIArr);
- const int *revNod(revNodArr->begin()),*revNodI(revNodIArr->begin()),*nodal(_conn->begin());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> d2Arr(DataArrayInt::New()),di2Arr(DataArrayInt::New()),rd2Arr(DataArrayInt::New()),rdi2Arr(DataArrayInt::New());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> edges(thisu->buildDescendingConnectivity(d2Arr,di2Arr,rd2Arr,rdi2Arr)); thisu=0;
- const int *d2(d2Arr->begin()),*rdi2(rdi2Arr->begin());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> edgesBaryArr(edges->getBarycenterAndOwner()),baryArr(getBarycenterAndOwner());
- const int nbOfNodes(getNumberOfNodes()),offset0(nbOfNodes+edges->getNumberOfCells());
+ const mcIdType *revNod(revNodArr->begin()),*revNodI(revNodIArr->begin()),*nodal(_conn->begin());
+ MCAuto<DataArrayIdType> d2Arr(DataArrayIdType::New()),di2Arr(DataArrayIdType::New()),rd2Arr(DataArrayIdType::New()),rdi2Arr(DataArrayIdType::New());
+ MCAuto<MEDCouplingUMesh> edges(thisu->buildDescendingConnectivity(d2Arr,di2Arr,rd2Arr,rdi2Arr)); thisu=0;
+ const mcIdType *d2(d2Arr->begin()),*rdi2(rdi2Arr->begin());
+ MCAuto<DataArrayDouble> edgesBaryArr(edges->computeCellCenterOfMass()),baryArr(computeCellCenterOfMass());
+ const mcIdType nbOfNodes(getNumberOfNodes()),offset0(nbOfNodes+edges->getNumberOfCells());
edges=0;
std::vector<const DataArrayDouble *> v(3); v[0]=getCoords(); v[1]=edgesBaryArr; v[2]=baryArr;
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> zeArr(DataArrayDouble::Aggregate(v)); baryArr=0; edgesBaryArr=0;
+ MCAuto<DataArrayDouble> zeArr(DataArrayDouble::Aggregate(v)); baryArr=0; edgesBaryArr=0;
std::string name("DualOf_"); name+=getName();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(name,INTERP_KERNEL::NORM_POLYGON)); ret->setCoords(zeArr);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cArr(DataArrayInt::New()),ciArr(DataArrayInt::New()); ciArr->alloc(nbOfNodes+1,1); ciArr->setIJ(0,0,0); cArr->alloc(0,1);
- for(int i=0;i<nbOfNodes;i++,revNodI++)
+ MCAuto<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(name,INTERP_KERNEL::NORM_POLYGON)); ret->setCoords(zeArr);
+ MCAuto<DataArrayIdType> cArr(DataArrayIdType::New()),ciArr(DataArrayIdType::New()); ciArr->alloc(nbOfNodes+1,1); ciArr->setIJ(0,0,0); cArr->alloc(0,1);
+ for(mcIdType i=0;i<nbOfNodes;i++,revNodI++)
{
- int nbOfCellsSharingNode(revNodI[1]-revNodI[0]);
+ mcIdType nbOfCellsSharingNode(revNodI[1]-revNodI[0]);
if(nbOfCellsSharingNode==0)
{
std::ostringstream oss; oss << "MEDCoupling1SGTUMesh::computeDualMesh2D : Node #" << i << " is orphan !";
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
- std::vector< std::vector<int> > polyg;
+ std::vector< std::vector<mcIdType> > polyg;
for(int j=0;j<nbOfCellsSharingNode;j++)
{
- int curCellId(revNod[revNodI[0]+j]);
- const int *connOfCurCell(nodal+3*curCellId);
+ mcIdType curCellId(revNod[revNodI[0]+j]);
+ const mcIdType *connOfCurCell(nodal+3*curCellId);
std::size_t nodePosInCurCell(std::distance(connOfCurCell,std::find(connOfCurCell,connOfCurCell+4,i)));
- std::vector<int> locV(3);
+ std::vector<mcIdType> locV(3);
locV[0]=d2[3*curCellId+DUAL_TRI_0[2*nodePosInCurCell+0]]+nbOfNodes; locV[1]=curCellId+offset0; locV[2]=d2[3*curCellId+DUAL_TRI_0[2*nodePosInCurCell+1]]+nbOfNodes;
polyg.push_back(locV);
int kk(0);
{
if(FACEID_NOT_SH_NODE[nodePosInCurCell]!=k)
{
- const int *edgeId(d2+3*curCellId+k);
+ const mcIdType *edgeId(d2+3*curCellId+k);
if(rdi2[*edgeId+1]-rdi2[*edgeId]==1)
{
- std::vector<int> locV2(2);
+ std::vector<mcIdType> locV2(2);
int zeLocEdgeIdRel(DUAL_TRI_1[2*nodePosInCurCell+kk]);
if(zeLocEdgeIdRel>0)
{ locV2[0]=d2[3*curCellId+zeLocEdgeIdRel-3]+nbOfNodes; locV2[1]=i; }
}
}
}
- std::vector<int> zePolyg(MEDCoupling1DGTUMesh::BuildAPolygonFromParts(polyg));
+ std::vector<mcIdType> zePolyg(MEDCoupling1DGTUMesh::BuildAPolygonFromParts(polyg));
cArr->insertAtTheEnd(zePolyg.begin(),zePolyg.end());
ciArr->setIJ(i+1,0,cArr->getNumberOfTuples());
}
*/
DataArrayDouble *MEDCoupling1SGTUMesh::getBoundingBoxForBBTree(double arcDetEps) const
{
- int spaceDim(getSpaceDimension()),nbOfCells(getNumberOfCells()),nbOfNodes(getNumberOfNodes()),nbOfNodesPerCell(getNumberOfNodesPerCell());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret(DataArrayDouble::New()); ret->alloc(nbOfCells,2*spaceDim);
+ mcIdType spaceDim(getSpaceDimension()),nbOfCells(getNumberOfCells()),nbOfNodes(getNumberOfNodes()),nbOfNodesPerCell(getNumberOfNodesPerCell());
+ MCAuto<DataArrayDouble> ret(DataArrayDouble::New()); ret->alloc(nbOfCells,2*spaceDim);
double *bbox(ret->getPointer());
- for(int i=0;i<nbOfCells*spaceDim;i++)
+ for(mcIdType i=0;i<nbOfCells*spaceDim;i++)
{
bbox[2*i]=std::numeric_limits<double>::max();
bbox[2*i+1]=-std::numeric_limits<double>::max();
}
const double *coordsPtr(_coords->getConstPointer());
- const int *conn(_conn->getConstPointer());
- for(int i=0;i<nbOfCells;i++)
+ const mcIdType *conn(_conn->getConstPointer());
+ for(mcIdType i=0;i<nbOfCells;i++)
{
int kk(0);
for(int j=0;j<nbOfNodesPerCell;j++,conn++)
{
- int nodeId(*conn);
+ mcIdType nodeId(*conn);
if(nodeId>=0 && nodeId<nbOfNodes)
{
for(int k=0;k<spaceDim;k++)
return ret.retn();
}
+/*!
+ * Returns the cell field giving for each cell in \a this its diameter. Diameter means the max length of all possible SEG2 in the cell.
+ *
+ * \return a new instance of field containing the result. The returned instance has to be deallocated by the caller.
+ */
+MEDCouplingFieldDouble *MEDCoupling1SGTUMesh::computeDiameterField() const
+{
+ checkFullyDefined();
+ MCAuto<MEDCouplingFieldDouble> ret(MEDCouplingFieldDouble::New(ON_CELLS,ONE_TIME));
+ mcIdType nbCells=getNumberOfCells();
+ MCAuto<DataArrayDouble> arr(DataArrayDouble::New());
+ arr->alloc(nbCells,1);
+ INTERP_KERNEL::AutoCppPtr<INTERP_KERNEL::DiameterCalculator> dc(_cm->buildInstanceOfDiameterCalulator(getSpaceDimension()));
+ dc->computeFor1SGTUMeshFrmt(nbCells,_conn->begin(),getCoords()->begin(),arr->getPointer());
+ ret->setMesh(this);
+ ret->setArray(arr);
+ ret->setName("Diameter");
+ return ret.retn();
+}
+
+/*!
+ * This method invert orientation of all cells in \a this.
+ * After calling this method the absolute value of measure of cells in \a this are the same than before calling.
+ * This method only operates on the connectivity so coordinates are not touched at all.
+ */
+void MEDCoupling1SGTUMesh::invertOrientationOfAllCells()
+{
+ checkConsistencyOfConnectivity();
+ INTERP_KERNEL::AutoCppPtr<INTERP_KERNEL::OrientationInverter> oi(INTERP_KERNEL::OrientationInverter::BuildInstanceFrom(getCellModelEnum()));
+ mcIdType nbOfNodesPerCell=ToIdType(_cm->getNumberOfNodes()),nbCells=getNumberOfCells();
+ mcIdType *conn(_conn->getPointer());
+ for(mcIdType i=0;i<nbCells;i++)
+ oi->operate(conn+i*nbOfNodesPerCell,conn+(i+1)*nbOfNodesPerCell);
+ updateTime();
+}
+
//==
MEDCoupling1DGTUMesh *MEDCoupling1DGTUMesh::New()
{
}
-MEDCoupling1DGTUMesh::MEDCoupling1DGTUMesh(const MEDCoupling1DGTUMesh& other, bool recDeepCpy):MEDCoupling1GTUMesh(other,recDeepCpy),_conn(other._conn)
+MEDCoupling1DGTUMesh::MEDCoupling1DGTUMesh(const MEDCoupling1DGTUMesh& other, bool recDeepCpy):MEDCoupling1GTUMesh(other,recDeepCpy),_conn_indx(other._conn_indx),_conn(other._conn)
{
if(recDeepCpy)
{
- const DataArrayInt *c(other._conn);
+ const DataArrayIdType *c(other._conn);
if(c)
- _conn=c->deepCpy();
+ _conn=c->deepCopy();
c=other._conn_indx;
if(c)
- _conn_indx=c->deepCpy();
+ _conn_indx=c->deepCopy();
}
}
}
/*!
- * This method behaves mostly like MEDCoupling1DGTUMesh::deepCpy method, except that only nodal connectivity arrays are deeply copied.
+ * This method behaves mostly like MEDCoupling1DGTUMesh::deepCopy method, except that only nodal connectivity arrays are deeply copied.
* The coordinates are shared between \a this and the returned instance.
*
- * \return MEDCouplingUMesh * - A new object instance holding the copy of \a this (deep for connectivity, shallow for coordiantes)
- * \sa MEDCoupling1DGTUMesh::deepCpy
+ * \return MEDCoupling1DGTUMesh * - A new object instance holding the copy of \a this (deep for connectivity, shallow for coordiantes)
+ * \sa MEDCoupling1DGTUMesh::deepCopy
*/
-MEDCouplingPointSet *MEDCoupling1DGTUMesh::deepCpyConnectivityOnly() const
+MEDCoupling1DGTUMesh *MEDCoupling1DGTUMesh::deepCopyConnectivityOnly() const
{
- checkCoherency();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(clone(false));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c(_conn->deepCpy()),ci(_conn_indx->deepCpy());
+ checkConsistencyLight();
+ MCAuto<MEDCoupling1DGTUMesh> ret(clone(false));
+ MCAuto<DataArrayIdType> c(_conn->deepCopy()),ci(_conn_indx->deepCopy());
ret->setNodalConnectivity(c,ci);
return ret.retn();
}
void MEDCoupling1DGTUMesh::updateTime() const
{
MEDCoupling1GTUMesh::updateTime();
- const DataArrayInt *c(_conn);
+ const DataArrayIdType *c(_conn);
if(c)
updateTimeWith(*c);
c=_conn_indx;
return MEDCoupling1GTUMesh::getHeapMemorySizeWithoutChildren();
}
-std::vector<const BigMemoryObject *> MEDCoupling1DGTUMesh::getDirectChildren() const
+std::vector<const BigMemoryObject *> MEDCoupling1DGTUMesh::getDirectChildrenWithNull() const
{
- std::vector<const BigMemoryObject *> ret(MEDCoupling1GTUMesh::getDirectChildren());
- const DataArrayInt *c(_conn);
- if(c)
- ret.push_back(c);
- c=_conn_indx;
- if(c)
- ret.push_back(c);
+ std::vector<const BigMemoryObject *> ret(MEDCoupling1GTUMesh::getDirectChildrenWithNull());
+ ret.push_back((const DataArrayIdType *)_conn);
+ ret.push_back((const DataArrayIdType *)_conn_indx);
return ret;
}
-MEDCouplingMesh *MEDCoupling1DGTUMesh::deepCpy() const
+MEDCoupling1DGTUMesh *MEDCoupling1DGTUMesh::deepCopy() const
{
return clone(true);
}
}
if(!MEDCoupling1GTUMesh::isEqualIfNotWhy(other,prec,reason))
return false;
- const DataArrayInt *c1(_conn),*c2(otherC->_conn);
+ const DataArrayIdType *c1(_conn),*c2(otherC->_conn);
if(c1==c2)
return true;
if(!c1 || !c2)
}
if(!c1->isEqualIfNotWhy(*c2,reason))
{
- reason.insert(0,"Nodal connectivity DataArrayInt differs : ");
+ reason.insert(0,"Nodal connectivity DataArrayIdType differs : ");
return false;
}
c1=_conn_indx; c2=otherC->_conn_indx;
}
if(!c1->isEqualIfNotWhy(*c2,reason))
{
- reason.insert(0,"Nodal connectivity index DataArrayInt differs : ");
+ reason.insert(0,"Nodal connectivity index DataArrayIdType differs : ");
return false;
}
return true;
return false;
if(!MEDCoupling1GTUMesh::isEqualWithoutConsideringStr(other,prec))
return false;
- const DataArrayInt *c1(_conn),*c2(otherC->_conn);
- if(c1==c2)
- return true;
- if(!c1 || !c2)
- return false;
- if(!c1->isEqualWithoutConsideringStr(*c2))
- return false;
- return true;
- c1=_conn_indx; c2=otherC->_conn_indx;
+ const DataArrayIdType *c1(_conn),*c2(otherC->_conn);
if(c1==c2)
return true;
if(!c1 || !c2)
const MEDCoupling1DGTUMesh *otherC=dynamic_cast<const MEDCoupling1DGTUMesh *>(other);
if(!otherC)
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::checkFastEquivalWith : Two meshes are not unstructured with single dynamic geometric type !");
- const DataArrayInt *c1(_conn),*c2(otherC->_conn);
+ const DataArrayIdType *c1(_conn),*c2(otherC->_conn);
if(c1!=c2)
{
if(!c1 || !c2)
}
}
-void MEDCoupling1DGTUMesh::checkCoherencyOfConnectivity() const
+void MEDCoupling1DGTUMesh::checkConsistencyOfConnectivity() const
{
- const DataArrayInt *c1(_conn);
+ const DataArrayIdType *c1(_conn);
if(c1)
{
if(c1->getNumberOfComponents()!=1)
else
throw INTERP_KERNEL::Exception("Nodal connectivity array not defined !");
//
- int sz2=_conn->getNumberOfTuples();
+ mcIdType sz2(_conn->getNumberOfTuples());
c1=_conn_indx;
if(c1)
{
throw INTERP_KERNEL::Exception("Nodal connectivity index array is expected to have a a size of 1 at least !");
if(c1->getInfoOnComponent(0)!="")
throw INTERP_KERNEL::Exception("Nodal connectivity index array is expected to have no info on its single component !");
- int f=c1->front(),ll=c1->back();
- if(f<0 || f>=sz2)
+ mcIdType f=c1->front(),ll=c1->back();
+ if(f<0 || (sz2>0 && f>=sz2))
{
std::ostringstream oss; oss << "Nodal connectivity index array first value (" << f << ") is expected to be exactly in [0," << sz2 << ") !";
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
else
throw INTERP_KERNEL::Exception("Nodal connectivity index array not defined !");
- int szOfC1Exp=_conn_indx->back();
+ mcIdType szOfC1Exp=_conn_indx->back();
if(sz2<szOfC1Exp)
{
- std::ostringstream oss; oss << "MEDCoupling1DGTUMesh::checkCoherencyOfConnectivity : The expected length of nodal connectivity array regarding index is " << szOfC1Exp << " but the actual size of it is " << c1->getNumberOfTuples() << " !";
+ std::ostringstream oss; oss << "MEDCoupling1DGTUMesh::checkConsistencyOfConnectivity : The expected length of nodal connectivity array regarding index is " << szOfC1Exp << " but the actual size of it is " << c1->getNumberOfTuples() << " !";
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
}
* In addition you are sure that the length of nodal connectivity index array is bigger than or equal to one.
* In addition you are also sure that length of nodal connectivity is coherent with the content of the last value in the index array.
*/
-void MEDCoupling1DGTUMesh::checkCoherency() const
+void MEDCoupling1DGTUMesh::checkConsistencyLight() const
{
- MEDCouplingPointSet::checkCoherency();
- checkCoherencyOfConnectivity();
+ MEDCouplingPointSet::checkConsistencyLight();
+ checkConsistencyOfConnectivity();
}
-void MEDCoupling1DGTUMesh::checkCoherency1(double eps) const
+void MEDCoupling1DGTUMesh::checkConsistency(double eps) const
{
- checkCoherency();
- const DataArrayInt *c1(_conn),*c2(_conn_indx);
+ checkConsistencyLight();
+ const DataArrayIdType *c1(_conn),*c2(_conn_indx);
if(!c2->isMonotonic(true))
- throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::checkCoherency1 : the nodal connectivity index is expected to be increasing monotinic !");
+ throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::checkConsistency : the nodal connectivity index is expected to be increasing monotinic !");
//
- int nbOfTuples=c1->getNumberOfTuples();
- int nbOfNodes=getNumberOfNodes();
- const int *w(c1->begin());
- for(int i=0;i<nbOfTuples;i++,w++)
+ mcIdType nbOfTuples(c1->getNumberOfTuples());
+ mcIdType nbOfNodes=getNumberOfNodes();
+ const mcIdType *w(c1->begin());
+ for(mcIdType i=0;i<nbOfTuples;i++,w++)
{
if(*w==-1) continue;
if(*w<0 || *w>=nbOfNodes)
}
}
-void MEDCoupling1DGTUMesh::checkCoherency2(double eps) const
+mcIdType MEDCoupling1DGTUMesh::getNumberOfCells() const
{
- checkCoherency1(eps);
-}
-
-int MEDCoupling1DGTUMesh::getNumberOfCells() const
-{
- checkCoherencyOfConnectivity();//do not remove
+ checkConsistencyOfConnectivity();//do not remove
return _conn_indx->getNumberOfTuples()-1;
}
*
* \return a newly allocated array
*/
-DataArrayInt *MEDCoupling1DGTUMesh::computeNbOfNodesPerCell() const
+DataArrayIdType *MEDCoupling1DGTUMesh::computeNbOfNodesPerCell() const
{
- checkCoherency();
+ checkConsistencyLight();
_conn_indx->checkMonotonic(true);
if(getCellModelEnum()!=INTERP_KERNEL::NORM_POLYHED)
return _conn_indx->deltaShiftIndex();
// for polyhedrons
- int nbOfCells=_conn_indx->getNumberOfTuples()-1;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ mcIdType nbOfCells=_conn_indx->getNumberOfTuples()-1;
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New();
ret->alloc(nbOfCells,1);
- int *retPtr=ret->getPointer();
- const int *ci=_conn_indx->begin(),*c=_conn->begin();
- for(int i=0;i<nbOfCells;i++,retPtr++,ci++)
- *retPtr=ci[1]-ci[0]-std::count(c+ci[0],c+ci[1],-1);
+ mcIdType *retPtr=ret->getPointer();
+ const mcIdType *ci=_conn_indx->begin(),*c=_conn->begin();
+ for(mcIdType i=0;i<nbOfCells;i++,retPtr++,ci++)
+ *retPtr=int(ci[1]-ci[0]-ToIdType(std::count(c+ci[0],c+ci[1],-1)));
return ret.retn();
}
*
* \return a newly allocated array
*/
-DataArrayInt *MEDCoupling1DGTUMesh::computeNbOfFacesPerCell() const
+DataArrayIdType *MEDCoupling1DGTUMesh::computeNbOfFacesPerCell() const
{
- checkCoherency();
+ checkConsistencyLight();
_conn_indx->checkMonotonic(true);
if(getCellModelEnum()!=INTERP_KERNEL::NORM_POLYHED && getCellModelEnum()!=INTERP_KERNEL::NORM_QPOLYG)
return _conn_indx->deltaShiftIndex();
if(getCellModelEnum()==INTERP_KERNEL::NORM_QPOLYG)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=_conn_indx->deltaShiftIndex();
+ MCAuto<DataArrayIdType> ret=_conn_indx->deltaShiftIndex();
ret->applyDivideBy(2);
return ret.retn();
}
// for polyhedrons
- int nbOfCells=_conn_indx->getNumberOfTuples()-1;
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ mcIdType nbOfCells=_conn_indx->getNumberOfTuples()-1;
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New();
ret->alloc(nbOfCells,1);
- int *retPtr=ret->getPointer();
- const int *ci=_conn_indx->begin(),*c=_conn->begin();
- for(int i=0;i<nbOfCells;i++,retPtr++,ci++)
- *retPtr=std::count(c+ci[0],c+ci[1],-1)+1;
+ mcIdType *retPtr=ret->getPointer();
+ const mcIdType *ci=_conn_indx->begin(),*c=_conn->begin();
+ for(mcIdType i=0;i<nbOfCells;i++,retPtr++,ci++)
+ *retPtr=ToIdType(std::count(c+ci[0],c+ci[1],-1))+1;
return ret.retn();
}
* This method computes effective number of nodes per cell. That is to say nodes appearing several times in nodal connectivity of a cell,
* will be counted only once here whereas it will be counted several times in MEDCoupling1DGTUMesh::computeNbOfNodesPerCell method.
*
- * \return DataArrayInt * - new object to be deallocated by the caller.
+ * \return DataArrayIdType * - new object to be deallocated by the caller.
* \sa MEDCoupling1DGTUMesh::computeNbOfNodesPerCell
*/
-DataArrayInt *MEDCoupling1DGTUMesh::computeEffectiveNbOfNodesPerCell() const
+DataArrayIdType *MEDCoupling1DGTUMesh::computeEffectiveNbOfNodesPerCell() const
{
- checkCoherency();
+ checkConsistencyLight();
_conn_indx->checkMonotonic(true);
- int nbOfCells(_conn_indx->getNumberOfTuples()-1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ mcIdType nbOfCells=_conn_indx->getNumberOfTuples()-1;
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New();
ret->alloc(nbOfCells,1);
- int *retPtr(ret->getPointer());
- const int *ci(_conn_indx->begin()),*c(_conn->begin());
+ mcIdType *retPtr(ret->getPointer());
+ const mcIdType *ci(_conn_indx->begin()),*c(_conn->begin());
if(getCellModelEnum()!=INTERP_KERNEL::NORM_POLYHED)
{
- for(int i=0;i<nbOfCells;i++,retPtr++,ci++)
+ for(mcIdType i=0;i<nbOfCells;i++,retPtr++,ci++)
{
- std::set<int> s(c+ci[0],c+ci[1]);
- *retPtr=(int)s.size();
+ std::set<mcIdType> s(c+ci[0],c+ci[1]);
+ *retPtr=ToIdType(s.size());
}
}
else
{
- for(int i=0;i<nbOfCells;i++,retPtr++,ci++)
+ for(mcIdType i=0;i<nbOfCells;i++,retPtr++,ci++)
{
- std::set<int> s(c+ci[0],c+ci[1]); s.erase(-1);
- *retPtr=(int)s.size();
+ std::set<mcIdType> s(c+ci[0],c+ci[1]); s.erase(-1);
+ *retPtr=ToIdType(s.size());
}
}
return ret.retn();
}
-void MEDCoupling1DGTUMesh::getNodeIdsOfCell(int cellId, std::vector<int>& conn) const
+void MEDCoupling1DGTUMesh::getNodeIdsOfCell(mcIdType cellId, std::vector<mcIdType>& conn) const
{
- int nbOfCells(getNumberOfCells());//performs checks
- if(cellId>=0 && cellId<nbOfCells)
+ mcIdType nbOfCells(getNumberOfCells());//performs checks
+ if(cellId<nbOfCells)
{
- int strt=_conn_indx->getIJ(cellId,0),stp=_conn_indx->getIJ(cellId+1,0);
- int nbOfNodes=stp-strt;
+ mcIdType strt=_conn_indx->getIJ(cellId,0),stp=_conn_indx->getIJ(cellId+1,0);
+ mcIdType nbOfNodes=stp-strt;
if(nbOfNodes<0)
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::getNodeIdsOfCell : the index array is invalid ! Should be increasing monotonic !");
conn.resize(nbOfNodes);
}
}
-int MEDCoupling1DGTUMesh::getNumberOfNodesInCell(int cellId) const
+mcIdType MEDCoupling1DGTUMesh::getNumberOfNodesInCell(mcIdType cellId) const
{
- int nbOfCells(getNumberOfCells());//performs checks
+ mcIdType nbOfCells=getNumberOfCells();//performs checks
if(cellId>=0 && cellId<nbOfCells)
{
- const int *conn(_conn->begin());
- int strt=_conn_indx->getIJ(cellId,0),stp=_conn_indx->getIJ(cellId+1,0);
- return stp-strt-std::count(conn+strt,conn+stp,-1);
+ const mcIdType *conn(_conn->begin());
+ mcIdType strt=_conn_indx->getIJ(cellId,0),stp=_conn_indx->getIJ(cellId+1,0);
+ return stp-strt-ToIdType(std::count(conn+strt,conn+stp,-1));
}
else
{
std::string MEDCoupling1DGTUMesh::simpleRepr() const
{
static const char msg0[]="No coordinates specified !";
+ if(!_cm)
+ return std::string("Cell type not specified");
std::ostringstream ret;
ret << "Single dynamic geometic type (" << _cm->getRepr() << ") unstructured mesh with name : \"" << getName() << "\"\n";
ret << "Description of mesh : \"" << getDescription() << "\"\n";
ret << msg0 << "\n";
ret << "Number of cells : ";
bool isOK=true;
- try { checkCoherency(); } catch(INTERP_KERNEL::Exception& /* e */)
+ try { checkConsistencyLight(); } catch(INTERP_KERNEL::Exception& /* e */)
{
ret << "Nodal connectivity arrays are not set or badly set !\n";
isOK=false;
ret << "\n\nNodal Connectivity : \n____________________\n\n";
//
bool isOK=true;
- try { checkCoherency1(); } catch(INTERP_KERNEL::Exception& /* e */)
+ try { checkConsistency(); } catch(INTERP_KERNEL::Exception& /* e */)
{
ret << "Nodal connectivity arrays are not set or badly set !\n";
isOK=false;
}
if(!isOK)
return ret.str();
- int nbOfCells=getNumberOfCells();
- const int *ci=_conn_indx->begin(),*c=_conn->begin();
- for(int i=0;i<nbOfCells;i++,ci++)
+ mcIdType nbOfCells=getNumberOfCells();
+ const mcIdType *ci=_conn_indx->begin(),*c=_conn->begin();
+ for(mcIdType i=0;i<nbOfCells;i++,ci++)
{
ret << "Cell #" << i << " : ";
std::copy(c+ci[0],c+ci[1],std::ostream_iterator<int>(ret," "));
DataArrayDouble *MEDCoupling1DGTUMesh::computeIsoBarycenterOfNodesPerCell() const
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret=DataArrayDouble::New();
+ MCAuto<DataArrayDouble> ret=DataArrayDouble::New();
int spaceDim=getSpaceDimension();
- int nbOfCells=getNumberOfCells();//checkCoherency()
- int nbOfNodes=getNumberOfNodes();
+ mcIdType nbOfCells=getNumberOfCells();//checkConsistencyLight()
+ mcIdType nbOfNodes=getNumberOfNodes();
ret->alloc(nbOfCells,spaceDim);
double *ptToFill=ret->getPointer();
const double *coor=_coords->begin();
- const int *nodal=_conn->begin(),*nodali=_conn_indx->begin();
+ const mcIdType *nodal=_conn->begin(),*nodali=_conn_indx->begin();
nodal+=nodali[0];
if(getCellModelEnum()!=INTERP_KERNEL::NORM_POLYHED)
{
- for(int i=0;i<nbOfCells;i++,ptToFill+=spaceDim,nodali++)
+ for(mcIdType i=0;i<nbOfCells;i++,ptToFill+=spaceDim,nodali++)
{
std::fill(ptToFill,ptToFill+spaceDim,0.);
if(nodali[0]<nodali[1])// >= to avoid division by 0.
{
- for(int j=nodali[0];j<nodali[1];j++,nodal++)
+ for(mcIdType j=nodali[0];j<nodali[1];j++,nodal++)
{
if(*nodal>=0 && *nodal<nbOfNodes)
std::transform(coor+spaceDim*nodal[0],coor+spaceDim*(nodal[0]+1),ptToFill,ptToFill,std::plus<double>());
std::ostringstream oss; oss << "MEDCoupling1DGTUMesh::computeIsoBarycenterOfNodesPerCell : on cell #" << i << " presence of nodeId #" << *nodal << " should be in [0," << nbOfNodes << ") !";
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
- std::transform(ptToFill,ptToFill+spaceDim,ptToFill,std::bind2nd(std::multiplies<double>(),1./(nodali[1]-nodali[0])));
+ std::transform(ptToFill,ptToFill+spaceDim,ptToFill,std::bind(std::multiplies<double>(),std::placeholders::_1,1./double(nodali[1]-nodali[0])));
}
}
else
}
else
{
- for(int i=0;i<nbOfCells;i++,ptToFill+=spaceDim,nodali++)
+ for(mcIdType i=0;i<nbOfCells;i++,ptToFill+=spaceDim,nodali++)
{
std::fill(ptToFill,ptToFill+spaceDim,0.);
if(nodali[0]<nodali[1])// >= to avoid division by 0.
{
int nbOfNod=0;
- for(int j=nodali[0];j<nodali[1];j++,nodal++)
+ for(mcIdType j=nodali[0];j<nodali[1];j++,nodal++)
{
if(*nodal==-1) continue;
if(*nodal>=0 && *nodal<nbOfNodes)
}
}
if(nbOfNod!=0)
- std::transform(ptToFill,ptToFill+spaceDim,ptToFill,std::bind2nd(std::multiplies<double>(),1./nbOfNod));
+ std::transform(ptToFill,ptToFill+spaceDim,ptToFill,std::bind(std::multiplies<double>(),std::placeholders::_1,1./nbOfNod));
else
{
std::ostringstream oss; oss << "MEDCoupling1DGTUMesh::computeIsoBarycenterOfNodesPerCell (polyhedron) : no nodes in cell #" << i << " !";
return ret.retn();
}
-void MEDCoupling1DGTUMesh::renumberCells(const int *old2NewBg, bool check)
+void MEDCoupling1DGTUMesh::renumberCells(const mcIdType *old2NewBg, bool check)
{
- int nbCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> o2n=DataArrayInt::New();
- o2n->useArray(old2NewBg,false,C_DEALLOC,nbCells,1);
+ mcIdType nbCells=getNumberOfCells();
+ MCAuto<DataArrayIdType> o2n=DataArrayIdType::New();
+ o2n->useArray(old2NewBg,false,DeallocType::C_DEALLOC,nbCells,1);
if(check)
o2n=o2n->checkAndPreparePermutation();
//
- const int *o2nPtr=o2n->getPointer();
- const int *conn=_conn->begin(),*conni=_conn_indx->begin();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConn=DataArrayInt::New();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> newConnI=DataArrayInt::New();
+ const mcIdType *o2nPtr=o2n->getPointer();
+ const mcIdType *conn=_conn->begin(),*conni=_conn_indx->begin();
+ MCAuto<DataArrayIdType> newConn=DataArrayIdType::New();
+ MCAuto<DataArrayIdType> newConnI=DataArrayIdType::New();
newConn->alloc(_conn->getNumberOfTuples(),1); newConnI->alloc(nbCells,1);
newConn->copyStringInfoFrom(*_conn); newConnI->copyStringInfoFrom(*_conn_indx);
//
- int *newC=newConn->getPointer(),*newCI=newConnI->getPointer();
- for(int i=0;i<nbCells;i++)
+ mcIdType *newC=newConn->getPointer(),*newCI=newConnI->getPointer();
+ for(mcIdType i=0;i<nbCells;i++)
{
- int newPos=o2nPtr[i];
- int sz=conni[i+1]-conni[i];
+ mcIdType newPos=o2nPtr[i];
+ mcIdType sz=conni[i+1]-conni[i];
if(sz>=0)
newCI[newPos]=sz;
else
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
}
- newConnI->computeOffsets2(); newCI=newConnI->getPointer();
+ newConnI->computeOffsetsFull(); newCI=newConnI->getPointer();
//
- for(int i=0;i<nbCells;i++,conni++)
+ for(mcIdType i=0;i<nbCells;i++,conni++)
{
- int newp=o2nPtr[i];
+ mcIdType newp=o2nPtr[i];
std::copy(conn+conni[0],conn+conni[1],newC+newCI[newp]);
}
_conn=newConn;
MEDCouplingUMesh *MEDCoupling1DGTUMesh::buildUnstructured() const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName(),getMeshDimension());
+ MCAuto<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName(),getMeshDimension());
ret->setCoords(getCoords());
- const int *nodalConn=_conn->begin(),*nodalConnI=_conn_indx->begin();
- int nbCells=getNumberOfCells();//checkCoherency
- int geoType=(int)getCellModelEnum();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c=DataArrayInt::New(); c->alloc(nbCells+_conn->getNumberOfTuples(),1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cI=DataArrayInt::New(); cI->alloc(nbCells+1);
- int *cPtr=c->getPointer(),*ciPtr=cI->getPointer();
+ const mcIdType *nodalConn=_conn->begin(),*nodalConnI=_conn_indx->begin();
+ mcIdType nbCells=getNumberOfCells();//checkConsistencyLight
+ mcIdType geoType=ToIdType(getCellModelEnum());
+ MCAuto<DataArrayIdType> c=DataArrayIdType::New(); c->alloc(nbCells+_conn->getNumberOfTuples(),1);
+ MCAuto<DataArrayIdType> cI=DataArrayIdType::New(); cI->alloc(nbCells+1);
+ mcIdType *cPtr=c->getPointer(),*ciPtr=cI->getPointer();
ciPtr[0]=0;
- for(int i=0;i<nbCells;i++,ciPtr++)
+ for(mcIdType i=0;i<nbCells;i++,ciPtr++)
{
- int sz=nodalConnI[i+1]-nodalConnI[i];
+ mcIdType sz=nodalConnI[i+1]-nodalConnI[i];
if(sz>=0)
{
*cPtr++=geoType;
/*!
* Do nothing for the moment, because there is no policy that allows to split polygons, polyhedrons ... into simplexes
*/
-DataArrayInt *MEDCoupling1DGTUMesh::simplexize(int policy)
+DataArrayIdType *MEDCoupling1DGTUMesh::simplexize(int policy)
{
- int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ mcIdType nbOfCells=getNumberOfCells();
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New();
ret->alloc(nbOfCells,1);
ret->iota(0);
return ret.retn();
void MEDCoupling1DGTUMesh::reprQuickOverview(std::ostream& stream) const
{
- stream << "MEDCoupling1DGTUMesh C++ instance at " << this << ". Type=" << _cm->getRepr() << ". Name : \"" << getName() << "\".";
+ stream << "MEDCoupling1DGTUMesh C++ instance at " << this << ". Type=";
+ if(!_cm)
+ {
+ stream << "Not defined";
+ return ;
+ }
+ stream << _cm->getRepr() << ". Name : \"" << getName() << "\".";
stream << " Mesh dimension : " << getMeshDimension() << ".";
if(!_coords)
{ stream << " No coordinates set !"; return ; }
stream << " Space dimension : " << _coords->getNumberOfComponents() << "." << std::endl;
stream << "Number of nodes : " << _coords->getNumberOfTuples() << ".";
bool isOK=true;
- try { checkCoherency(); } catch(INTERP_KERNEL::Exception& /* e */)
+ try { checkConsistencyLight(); } catch(INTERP_KERNEL::Exception& /* e */)
{
stream << std::endl << "Nodal connectivity NOT set properly !\n";
isOK=false;
return Merge1DGTUMeshesOnSameCoords(ms);
}
-MEDCouplingPointSet *MEDCoupling1DGTUMesh::buildPartOfMySelfKeepCoords(const int *begin, const int *end) const
+MEDCouplingPointSet *MEDCoupling1DGTUMesh::buildPartOfMySelfKeepCoords(const mcIdType *begin, const mcIdType *end) const
{
- checkCoherency();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
+ checkConsistencyLight();
+ MCAuto<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
ret->setCoords(_coords);
- DataArrayInt *c=0,*ci=0;
- MEDCouplingUMesh::ExtractFromIndexedArrays(begin,end,_conn,_conn_indx,c,ci);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cSafe(c),ciSafe(ci);
+ DataArrayIdType *c=0,*ci=0;
+ DataArrayIdType::ExtractFromIndexedArrays(begin,end,_conn,_conn_indx,c,ci);
+ MCAuto<DataArrayIdType> cSafe(c),ciSafe(ci);
ret->setNodalConnectivity(c,ci);
return ret.retn();
}
-MEDCouplingPointSet *MEDCoupling1DGTUMesh::buildPartOfMySelfKeepCoords2(int start, int end, int step) const
+MEDCouplingPointSet *MEDCoupling1DGTUMesh::buildPartOfMySelfKeepCoordsSlice(mcIdType start, mcIdType end, mcIdType step) const
{
- checkCoherency();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
+ checkConsistencyLight();
+ MCAuto<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
ret->setCoords(_coords);
- DataArrayInt *c=0,*ci=0;
- MEDCouplingUMesh::ExtractFromIndexedArrays2(start,end,step,_conn,_conn_indx,c,ci);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cSafe(c),ciSafe(ci);
+ DataArrayIdType *c=0,*ci=0;
+ DataArrayIdType::ExtractFromIndexedArraysSlice(start,end,step,_conn,_conn_indx,c,ci);
+ MCAuto<DataArrayIdType> cSafe(c),ciSafe(ci);
ret->setNodalConnectivity(c,ci);
return ret.retn();
}
void MEDCoupling1DGTUMesh::computeNodeIdsAlg(std::vector<bool>& nodeIdsInUse) const
{
- int sz((int)nodeIdsInUse.size());
- int nbCells(getNumberOfCells());
- const int *w(_conn->begin()),*wi(_conn_indx->begin());
- for(int i=0;i<nbCells;i++,wi++)
- for(const int *pt=w+wi[0];pt!=w+wi[1];pt++)
- if(*pt!=-1)
+ checkConsistency();
+ mcIdType sz(ToIdType(nodeIdsInUse.size()));
+ for(const mcIdType *conn=_conn->begin();conn!=_conn->end();conn++)
+ {
+ if(*conn>=0 && *conn<sz)
+ nodeIdsInUse[*conn]=true;
+ else
{
- if(*pt>=0 && *pt<sz)
- nodeIdsInUse[*pt]=true;
- else
+ if(*conn!=-1)
{
- std::ostringstream oss; oss << "MEDCoupling1DGTUMesh::computeNodeIdsAlg : At cell #" << i << " presence of node id #" << *pt << " should be in [0," << sz << ") !";
+ std::ostringstream oss; oss << "MEDCoupling1DGTUMesh::computeNodeIdsAlg : At pos #" << std::distance(_conn->begin(),conn) << " value is " << *conn << " must be in [0," << sz << ") !";
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
}
+ }
}
-void MEDCoupling1DGTUMesh::getReverseNodalConnectivity(DataArrayInt *revNodal, DataArrayInt *revNodalIndx) const
+void MEDCoupling1DGTUMesh::getReverseNodalConnectivity(DataArrayIdType *revNodal, DataArrayIdType *revNodalIndx) const
{
checkFullyDefined();
- int nbOfNodes=getNumberOfNodes();
- int *revNodalIndxPtr=(int *)malloc((nbOfNodes+1)*sizeof(int));
- revNodalIndx->useArray(revNodalIndxPtr,true,C_DEALLOC,nbOfNodes+1,1);
+ mcIdType nbOfNodes=getNumberOfNodes();
+ mcIdType *revNodalIndxPtr=(mcIdType *)malloc((nbOfNodes+1)*sizeof(mcIdType));
+ revNodalIndx->useArray(revNodalIndxPtr,true,DeallocType::C_DEALLOC,nbOfNodes+1,1);
std::fill(revNodalIndxPtr,revNodalIndxPtr+nbOfNodes+1,0);
- const int *conn=_conn->begin(),*conni=_conn_indx->begin();
- int nbOfCells=getNumberOfCells();
- int nbOfEltsInRevNodal=0;
- for(int eltId=0;eltId<nbOfCells;eltId++)
+ const mcIdType *conn=_conn->begin(),*conni=_conn_indx->begin();
+ mcIdType nbOfCells=getNumberOfCells();
+ mcIdType nbOfEltsInRevNodal=0;
+ for(mcIdType eltId=0;eltId<nbOfCells;eltId++)
{
- int nbOfNodesPerCell=conni[eltId+1]-conni[eltId];
+ mcIdType nbOfNodesPerCell=conni[eltId+1]-conni[eltId];
if(nbOfNodesPerCell>=0)
{
- for(int j=0;j<nbOfNodesPerCell;j++)
+ for(mcIdType j=0;j<nbOfNodesPerCell;j++)
{
- int nodeId=conn[conni[eltId]+j];
+ mcIdType nodeId=conn[conni[eltId]+j];
if(nodeId==-1) continue;
if(nodeId>=0 && nodeId<nbOfNodes)
{
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
}
- std::transform(revNodalIndxPtr+1,revNodalIndxPtr+nbOfNodes+1,revNodalIndxPtr,revNodalIndxPtr+1,std::plus<int>());
+ std::transform(revNodalIndxPtr+1,revNodalIndxPtr+nbOfNodes+1,revNodalIndxPtr,revNodalIndxPtr+1,std::plus<mcIdType>());
conn=_conn->begin();
- int *revNodalPtr=(int *)malloc((nbOfEltsInRevNodal)*sizeof(int));
- revNodal->useArray(revNodalPtr,true,C_DEALLOC,nbOfEltsInRevNodal,1);
+ mcIdType *revNodalPtr=(mcIdType *)malloc((nbOfEltsInRevNodal)*sizeof(mcIdType));
+ revNodal->useArray(revNodalPtr,true,DeallocType::C_DEALLOC,nbOfEltsInRevNodal,1);
std::fill(revNodalPtr,revNodalPtr+nbOfEltsInRevNodal,-1);
- for(int eltId=0;eltId<nbOfCells;eltId++)
+ for(mcIdType eltId=0;eltId<nbOfCells;eltId++)
{
- int nbOfNodesPerCell=conni[eltId+1]-conni[eltId];
- for(int j=0;j<nbOfNodesPerCell;j++)
+ mcIdType nbOfNodesPerCell=conni[eltId+1]-conni[eltId];
+ for(mcIdType j=0;j<nbOfNodesPerCell;j++)
{
- int nodeId=conn[conni[eltId]+j];
+ mcIdType nodeId=conn[conni[eltId]+j];
if(nodeId!=-1)
- *std::find_if(revNodalPtr+revNodalIndxPtr[nodeId],revNodalPtr+revNodalIndxPtr[nodeId+1],std::bind2nd(std::equal_to<int>(),-1))=eltId;
+ *std::find_if(revNodalPtr+revNodalIndxPtr[nodeId],revNodalPtr+revNodalIndxPtr[nodeId+1],std::bind(std::equal_to<mcIdType>(),std::placeholders::_1,-1))=eltId;
}
}
}
void MEDCoupling1DGTUMesh::checkFullyDefined() const
{
- if(!((const DataArrayInt *)_conn) || !((const DataArrayInt *)_conn_indx) || !((const DataArrayDouble *)_coords))
+ if(!((const DataArrayIdType *)_conn) || !((const DataArrayIdType *)_conn_indx) || !((const DataArrayDouble *)_coords))
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::checkFullyDefined : part of this is not fully defined.");
}
-bool MEDCoupling1DGTUMesh::isEmptyMesh(const std::vector<int>& tinyInfo) const
+bool MEDCoupling1DGTUMesh::isEmptyMesh(const std::vector<mcIdType>& tinyInfo) const
{
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::isEmptyMesh : not implemented yet !");
}
-void MEDCoupling1DGTUMesh::getTinySerializationInformation(std::vector<double>& tinyInfoD, std::vector<int>& tinyInfo, std::vector<std::string>& littleStrings) const
+void MEDCoupling1DGTUMesh::getTinySerializationInformation(std::vector<double>& tinyInfoD, std::vector<mcIdType>& tinyInfo, std::vector<std::string>& littleStrings) const
{
int it,order;
double time=getTime(it,order);
std::vector<std::string> littleStrings2,littleStrings3,littleStrings4;
if((const DataArrayDouble *)_coords)
_coords->getTinySerializationStrInformation(littleStrings2);
- if((const DataArrayInt *)_conn)
+ if((const DataArrayIdType *)_conn)
_conn->getTinySerializationStrInformation(littleStrings3);
- if((const DataArrayInt *)_conn_indx)
+ if((const DataArrayIdType *)_conn_indx)
_conn_indx->getTinySerializationStrInformation(littleStrings4);
- int sz0((int)littleStrings2.size()),sz1((int)littleStrings3.size()),sz2((int)littleStrings4.size());
+ mcIdType sz0(ToIdType(littleStrings2.size())),sz1(ToIdType(littleStrings3.size())),sz2(ToIdType(littleStrings4.size()));
littleStrings.insert(littleStrings.end(),littleStrings2.begin(),littleStrings2.end());
littleStrings.insert(littleStrings.end(),littleStrings3.begin(),littleStrings3.end());
littleStrings.insert(littleStrings.end(),littleStrings4.begin(),littleStrings4.end());
tinyInfo.push_back(getCellModelEnum());
tinyInfo.push_back(it);
tinyInfo.push_back(order);
- std::vector<int> tinyInfo2,tinyInfo3,tinyInfo4;
+ std::vector<mcIdType> tinyInfo2,tinyInfo3,tinyInfo4;
if((const DataArrayDouble *)_coords)
_coords->getTinySerializationIntInformation(tinyInfo2);
- if((const DataArrayInt *)_conn)
+ if((const DataArrayIdType *)_conn)
_conn->getTinySerializationIntInformation(tinyInfo3);
- if((const DataArrayInt *)_conn_indx)
+ if((const DataArrayIdType *)_conn_indx)
_conn_indx->getTinySerializationIntInformation(tinyInfo4);
- int sz3((int)tinyInfo2.size()),sz4((int)tinyInfo3.size()),sz5((int)tinyInfo4.size());
+ mcIdType sz3(ToIdType(tinyInfo2.size())),sz4(ToIdType(tinyInfo3.size())),sz5(ToIdType(tinyInfo4.size()));
tinyInfo.push_back(sz0); tinyInfo.push_back(sz1); tinyInfo.push_back(sz2); tinyInfo.push_back(sz3); tinyInfo.push_back(sz4); tinyInfo.push_back(sz5);
tinyInfo.insert(tinyInfo.end(),tinyInfo2.begin(),tinyInfo2.end());
tinyInfo.insert(tinyInfo.end(),tinyInfo3.begin(),tinyInfo3.end());
tinyInfoD.push_back(time);
}
-void MEDCoupling1DGTUMesh::resizeForUnserialization(const std::vector<int>& tinyInfo, DataArrayInt *a1, DataArrayDouble *a2, std::vector<std::string>& littleStrings) const
+void MEDCoupling1DGTUMesh::resizeForUnserialization(const std::vector<mcIdType>& tinyInfo, DataArrayIdType *a1, DataArrayDouble *a2, std::vector<std::string>& littleStrings) const
{
- std::vector<int> tinyInfo2(tinyInfo.begin()+9,tinyInfo.begin()+9+tinyInfo[6]);
- std::vector<int> tinyInfo1(tinyInfo.begin()+9+tinyInfo[6],tinyInfo.begin()+9+tinyInfo[6]+tinyInfo[7]);
- std::vector<int> tinyInfo12(tinyInfo.begin()+9+tinyInfo[6]+tinyInfo[7],tinyInfo.begin()+9+tinyInfo[6]+tinyInfo[7]+tinyInfo[8]);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> p1(DataArrayInt::New()); p1->resizeForUnserialization(tinyInfo1);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> p2(DataArrayInt::New()); p2->resizeForUnserialization(tinyInfo12);
- std::vector<const DataArrayInt *> v(2); v[0]=p1; v[1]=p2;
- p2=DataArrayInt::Aggregate(v);
+ std::vector<mcIdType> tinyInfo2(tinyInfo.begin()+9,tinyInfo.begin()+9+tinyInfo[6]);
+ std::vector<mcIdType> tinyInfo1(tinyInfo.begin()+9+tinyInfo[6],tinyInfo.begin()+9+tinyInfo[6]+tinyInfo[7]);
+ std::vector<mcIdType> tinyInfo12(tinyInfo.begin()+9+tinyInfo[6]+tinyInfo[7],tinyInfo.begin()+9+tinyInfo[6]+tinyInfo[7]+tinyInfo[8]);
+ MCAuto<DataArrayIdType> p1(DataArrayIdType::New()); p1->resizeForUnserialization(tinyInfo1);
+ MCAuto<DataArrayIdType> p2(DataArrayIdType::New()); p2->resizeForUnserialization(tinyInfo12);
+ std::vector<const DataArrayIdType *> v(2); v[0]=p1; v[1]=p2;
+ p2=DataArrayIdType::Aggregate(v);
a2->resizeForUnserialization(tinyInfo2);
a1->alloc(p2->getNbOfElems(),1);
}
-void MEDCoupling1DGTUMesh::serialize(DataArrayInt *&a1, DataArrayDouble *&a2) const
+void MEDCoupling1DGTUMesh::serialize(DataArrayIdType *&a1, DataArrayDouble *&a2) const
{
- int sz(0);
- if((const DataArrayInt *)_conn)
+ mcIdType sz(0);
+ if((const DataArrayIdType *)_conn)
if(_conn->isAllocated())
sz=_conn->getNbOfElems();
- if((const DataArrayInt *)_conn_indx)
+ if((const DataArrayIdType *)_conn_indx)
if(_conn_indx->isAllocated())
sz+=_conn_indx->getNbOfElems();
- a1=DataArrayInt::New();
+ a1=DataArrayIdType::New();
a1->alloc(sz,1);
- int *work(a1->getPointer());
- if(sz!=0 && (const DataArrayInt *)_conn)
+ mcIdType *work(a1->getPointer());
+ if(sz!=0 && (const DataArrayIdType *)_conn)
work=std::copy(_conn->begin(),_conn->end(),a1->getPointer());
- if(sz!=0 && (const DataArrayInt *)_conn_indx)
+ if(sz!=0 && (const DataArrayIdType *)_conn_indx)
std::copy(_conn_indx->begin(),_conn_indx->end(),work);
sz=0;
if((const DataArrayDouble *)_coords)
std::copy(_coords->begin(),_coords->end(),a2->getPointer());
}
-void MEDCoupling1DGTUMesh::unserialization(const std::vector<double>& tinyInfoD, const std::vector<int>& tinyInfo, const DataArrayInt *a1, DataArrayDouble *a2,
+void MEDCoupling1DGTUMesh::unserialization(const std::vector<double>& tinyInfoD, const std::vector<mcIdType>& tinyInfo, const DataArrayIdType *a1, DataArrayDouble *a2,
const std::vector<std::string>& littleStrings)
{
INTERP_KERNEL::NormalizedCellType gt((INTERP_KERNEL::NormalizedCellType)tinyInfo[0]);
setName(littleStrings[0]);
setDescription(littleStrings[1]);
setTimeUnit(littleStrings[2]);
- setTime(tinyInfoD[0],tinyInfo[1],tinyInfo[2]);
- int sz0(tinyInfo[3]),sz1(tinyInfo[4]),sz2(tinyInfo[5]),sz3(tinyInfo[6]),sz4(tinyInfo[7]),sz5(tinyInfo[8]);
+ setTime(tinyInfoD[0],FromIdType<int>(tinyInfo[1]),FromIdType<int>(tinyInfo[2]));
+ mcIdType sz0(tinyInfo[3]),sz1(tinyInfo[4]),sz2(tinyInfo[5]),sz3(tinyInfo[6]),sz4(tinyInfo[7]),sz5(tinyInfo[8]);
//
_coords=DataArrayDouble::New();
- std::vector<int> tinyInfo2(tinyInfo.begin()+9,tinyInfo.begin()+9+sz3);
+ std::vector<mcIdType> tinyInfo2(tinyInfo.begin()+9,tinyInfo.begin()+9+sz3);
_coords->resizeForUnserialization(tinyInfo2);
std::copy(a2->begin(),a2->end(),_coords->getPointer());
- _conn=DataArrayInt::New();
- std::vector<int> tinyInfo3(tinyInfo.begin()+9+sz3,tinyInfo.begin()+9+sz3+sz4);
+ _conn=DataArrayIdType::New();
+ std::vector<mcIdType> tinyInfo3(tinyInfo.begin()+9+sz3,tinyInfo.begin()+9+sz3+sz4);
_conn->resizeForUnserialization(tinyInfo3);
std::copy(a1->begin(),a1->begin()+_conn->getNbOfElems(),_conn->getPointer());
- _conn_indx=DataArrayInt::New();
- std::vector<int> tinyInfo4(tinyInfo.begin()+9+sz3+sz4,tinyInfo.begin()+9+sz3+sz4+sz5);
+ _conn_indx=DataArrayIdType::New();
+ std::vector<mcIdType> tinyInfo4(tinyInfo.begin()+9+sz3+sz4,tinyInfo.begin()+9+sz3+sz4+sz5);
_conn_indx->resizeForUnserialization(tinyInfo4);
std::copy(a1->begin()+_conn->getNbOfElems(),a1->end(),_conn_indx->getPointer());
std::vector<std::string> littleStrings2(littleStrings.begin()+3,littleStrings.begin()+3+sz0);
_conn_indx->finishUnserialization(tinyInfo4,littleStrings4);
}
+/*!
+ * Finds nodes not used in any cell and returns an array giving a new id to every node
+ * by excluding the unused nodes, for which the array holds -1. The result array is
+ * a mapping in "Old to New" mode.
+ * \return DataArrayIdType * - a new instance of DataArrayIdType. Its length is \a
+ * this->getNumberOfNodes(). It holds for each node of \a this mesh either -1
+ * if the node is unused or a new id else. The caller is to delete this
+ * array using decrRef() as it is no more needed.
+ * \throw If the coordinates array is not set.
+ * \throw If the nodal connectivity of cells is not defined.
+ * \throw If the nodal connectivity includes an invalid id.
+ * \sa MEDCoupling1DGTUMesh::getNodeIdsInUse, areAllNodesFetched
+ */
+DataArrayIdType *MEDCoupling1DGTUMesh::computeFetchedNodeIds() const
+{
+ checkConsistency();
+ mcIdType nbNodes(getNumberOfNodes());
+ std::vector<bool> fetchedNodes(nbNodes,false);
+ computeNodeIdsAlg(fetchedNodes);
+ mcIdType sz(ToIdType(std::count(fetchedNodes.begin(),fetchedNodes.end(),true)));
+ MCAuto<DataArrayIdType> ret(DataArrayIdType::New()); ret->alloc(sz,1);
+ mcIdType *retPtr(ret->getPointer());
+ for(mcIdType i=0;i<nbNodes;i++)
+ if(fetchedNodes[i])
+ *retPtr++=i;
+ return ret.retn();
+}
+
/*!
* Finds nodes not used in any cell and returns an array giving a new id to every node
* by excluding the unused nodes, for which the array holds -1. The result array is
* a mapping in "Old to New" mode.
* \param [out] nbrOfNodesInUse - number of node ids present in the nodal connectivity.
- * \return DataArrayInt * - a new instance of DataArrayInt. Its length is \a
+ * \return DataArrayIdType * - a new instance of DataArrayIdType. Its length is \a
* this->getNumberOfNodes(). It holds for each node of \a this mesh either -1
* if the node is unused or a new id else. The caller is to delete this
* array using decrRef() as it is no more needed.
* \throw If the coordinates array is not set.
* \throw If the nodal connectivity of cells is not defined.
* \throw If the nodal connectivity includes an invalid id.
+ * \sa MEDCoupling1DGTUMesh::computeFetchedNodeIds, areAllNodesFetched
*/
-DataArrayInt *MEDCoupling1DGTUMesh::getNodeIdsInUse(int& nbrOfNodesInUse) const
+DataArrayIdType *MEDCoupling1DGTUMesh::getNodeIdsInUse(mcIdType& nbrOfNodesInUse) const
{
nbrOfNodesInUse=-1;
- int nbOfNodes=getNumberOfNodes();
- int nbOfCells=getNumberOfCells();//checkCoherency
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New();
+ mcIdType nbOfNodes=getNumberOfNodes();
+ mcIdType nbOfCells=getNumberOfCells();//checkConsistencyLight
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New();
ret->alloc(nbOfNodes,1);
- int *traducer=ret->getPointer();
+ mcIdType *traducer=ret->getPointer();
std::fill(traducer,traducer+nbOfNodes,-1);
- const int *conn=_conn->begin(),*conni(_conn_indx->begin());
- for(int i=0;i<nbOfCells;i++,conni++)
+ const mcIdType *conn=_conn->begin(),*conni(_conn_indx->begin());
+ for(mcIdType i=0;i<nbOfCells;i++,conni++)
{
- int nbNodesPerCell=conni[1]-conni[0];
- for(int j=0;j<nbNodesPerCell;j++)
+ mcIdType nbNodesPerCell=conni[1]-conni[0];
+ for(mcIdType j=0;j<nbNodesPerCell;j++)
{
- int nodeId=conn[conni[0]+j];
+ mcIdType nodeId=conn[conni[0]+j];
if(nodeId==-1) continue;
if(nodeId>=0 && nodeId<nbOfNodes)
traducer[nodeId]=1;
}
}
}
- nbrOfNodesInUse=(int)std::count(traducer,traducer+nbOfNodes,1);
+ nbrOfNodesInUse=ToIdType(std::count(traducer,traducer+nbOfNodes,1));
std::transform(traducer,traducer+nbOfNodes,traducer,MEDCouplingAccVisit());
return ret.retn();
}
+/*!
+ * This method renumbers only nodal connectivity in \a this. The renumbering is only an offset applied. So this method is a specialization of
+ * \a renumberNodesInConn. \b WARNING, this method does not check that the resulting node ids in the nodal connectivity is in a valid range !
+ *
+ * \param [in] offset - specifies the offset to be applied on each element of connectivity.
+ *
+ * \sa renumberNodesInConn
+ */
+void MEDCoupling1DGTUMesh::renumberNodesWithOffsetInConn(mcIdType offset)
+{
+ getNumberOfCells();//only to check that all is well defined.
+ //
+ mcIdType nbOfTuples(_conn->getNumberOfTuples());
+ mcIdType *pt(_conn->getPointer());
+ for(mcIdType i=0;i<nbOfTuples;i++,pt++)
+ {
+ if(*pt==-1) continue;
+ *pt+=offset;
+ }
+ //
+ updateTime();
+}
+
+/*!
+ * Same than renumberNodesInConn(const mcIdType *) except that here the format of old-to-new traducer is using map instead
+ * of array. This method is dedicated for renumbering from a big set of nodes the a tiny set of nodes which is the case during extraction
+ * of a big mesh.
+ */
+void MEDCoupling1DGTUMesh::renumberNodesInConn(const INTERP_KERNEL::HashMap<mcIdType,mcIdType>& newNodeNumbersO2N)
+{
+ this->renumberNodesInConnT< INTERP_KERNEL::HashMap<mcIdType,mcIdType> >(newNodeNumbersO2N);
+}
+
+/*!
+ * Same than renumberNodesInConn(const mcIdType *) except that here the format of old-to-new traducer is using map instead
+ * of array. This method is dedicated for renumbering from a big set of nodes the a tiny set of nodes which is the case during extraction
+ * of a big mesh.
+ */
+void MEDCoupling1DGTUMesh::renumberNodesInConn(const std::map<mcIdType,mcIdType>& newNodeNumbersO2N)
+{
+ this->renumberNodesInConnT< std::map<mcIdType,mcIdType> >(newNodeNumbersO2N);
+}
+
/*!
* Changes ids of nodes within the nodal connectivity arrays according to a permutation
* array in "Old to New" mode. The node coordinates array is \b not changed by this method.
* \warning This method performs no check of validity of new ids. **Use it with care !**
* \param [in] newNodeNumbersO2N - a permutation array, of length \a
* this->getNumberOfNodes(), in "Old to New" mode.
- * See \ref MEDCouplingArrayRenumbering for more info on renumbering modes.
+ * See \ref numbering for more info on renumbering modes.
* \throw If the nodal connectivity of cells is not defined.
*/
-void MEDCoupling1DGTUMesh::renumberNodesInConn(const int *newNodeNumbersO2N)
+void MEDCoupling1DGTUMesh::renumberNodesInConn(const mcIdType *newNodeNumbersO2N)
{
getNumberOfCells();//only to check that all is well defined.
//
- int nbElemsIn=getNumberOfNodes();
- int nbOfTuples=_conn->getNumberOfTuples();
- int *pt=_conn->getPointer();
- for(int i=0;i<nbOfTuples;i++,pt++)
+ mcIdType nbElemsIn(getNumberOfNodes()),nbOfTuples(_conn->getNumberOfTuples());
+ mcIdType *pt(_conn->getPointer());
+ for(mcIdType i=0;i<nbOfTuples;i++,pt++)
{
if(*pt==-1) continue;
if(*pt>=0 && *pt<nbElemsIn)
throw INTERP_KERNEL::Exception(oss.str().c_str());
}
}
- _conn->declareAsNew();
//
updateTime();
}
* \param [in] fullyIn input that specifies if all node ids must be in [\a begin,\a end) array to consider cell to be in.
* \param [in,out] cellIdsKeptArr array where all candidate cell ids are put at the end.
*/
-void MEDCoupling1DGTUMesh::fillCellIdsToKeepFromNodeIds(const int *begin, const int *end, bool fullyIn, DataArrayInt *&cellIdsKeptArr) const
+void MEDCoupling1DGTUMesh::fillCellIdsToKeepFromNodeIds(const mcIdType *begin, const mcIdType *end, bool fullyIn, DataArrayIdType *&cellIdsKeptArr) const
{
- int nbOfCells=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cellIdsKept=DataArrayInt::New(); cellIdsKept->alloc(0,1);
- int tmp=-1;
- int sz=_conn->getMaxValue(tmp); sz=std::max(sz,0)+1;
+ mcIdType nbOfCells=getNumberOfCells();
+ MCAuto<DataArrayIdType> cellIdsKept=DataArrayIdType::New(); cellIdsKept->alloc(0,1);
+ mcIdType tmp=-1;
+ mcIdType sz=_conn->getMaxValue(tmp); sz=std::max(sz,ToIdType(0))+1;
std::vector<bool> fastFinder(sz,false);
- for(const int *work=begin;work!=end;work++)
+ for(const mcIdType *work=begin;work!=end;work++)
if(*work>=0 && *work<sz)
fastFinder[*work]=true;
- const int *conn=_conn->begin(),*conni=_conn_indx->begin();
- for(int i=0;i<nbOfCells;i++,conni++)
+ const mcIdType *conn=_conn->begin(),*conni=_conn_indx->begin();
+ for(mcIdType i=0;i<nbOfCells;i++,conni++)
{
int ref=0,nbOfHit=0;
- int nbNodesPerCell=conni[1]-conni[0];
+ mcIdType nbNodesPerCell=conni[1]-conni[0];
if(nbNodesPerCell>=0)
{
- for(int j=0;j<nbNodesPerCell;j++)
+ for(mcIdType j=0;j<nbNodesPerCell;j++)
{
- int nodeId=conn[conni[0]+j];
+ mcIdType nodeId=conn[conni[0]+j];
if(nodeId>=0)
{
ref++;
cellIdsKeptArr=cellIdsKept.retn();
}
-void MEDCoupling1DGTUMesh::allocateCells(int nbOfCells)
+void MEDCoupling1DGTUMesh::allocateCells(mcIdType nbOfCells)
{
if(nbOfCells<0)
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::allocateCells : the input number of cells should be >= 0 !");
- _conn=DataArrayInt::New();
+ _conn=DataArrayIdType::New();
_conn->reserve(nbOfCells*3);
- _conn_indx=DataArrayInt::New();
+ _conn_indx=DataArrayIdType::New();
_conn_indx->reserve(nbOfCells+1); _conn_indx->pushBackSilent(0);
declareAsNew();
}
* \param [in] nodalConnOfCellEnd - the end (excluded) of nodal connectivity of the cell to add.
* \throw If the length of the input nodal connectivity array of the cell to add is not equal to number of nodes per cell relative to the unique geometric type
* attached to \a this.
- * \thow If the nodal connectivity array in \a this is null (call MEDCoupling1SGTUMesh::allocateCells before).
+ * \throw If the nodal connectivity array in \a this is null (call MEDCoupling1SGTUMesh::allocateCells before).
*/
-void MEDCoupling1DGTUMesh::insertNextCell(const int *nodalConnOfCellBg, const int *nodalConnOfCellEnd)
+void MEDCoupling1DGTUMesh::insertNextCell(const mcIdType *nodalConnOfCellBg, const mcIdType *nodalConnOfCellEnd)
{
- int sz=(int)std::distance(nodalConnOfCellBg,nodalConnOfCellEnd);
- DataArrayInt *c(_conn),*c2(_conn_indx);
+ std::size_t sz(std::distance(nodalConnOfCellBg,nodalConnOfCellEnd));
+ DataArrayIdType *c(_conn),*c2(_conn_indx);
if(c && c2)
{
- int pos=c2->back();
+ mcIdType pos=c2->back();
if(pos==c->getNumberOfTuples())
{
c->pushBackValsSilent(nodalConnOfCellBg,nodalConnOfCellEnd);
- c2->pushBackSilent(pos+sz);
+ c2->pushBackSilent(pos+ToIdType(sz));
}
else
{
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::insertNextCell : nodal connectivity array is null ! Call MEDCoupling1DGTUMesh::allocateCells before !");
}
-void MEDCoupling1DGTUMesh::setNodalConnectivity(DataArrayInt *nodalConn, DataArrayInt *nodalConnIndex)
+void MEDCoupling1DGTUMesh::setNodalConnectivity(DataArrayIdType *nodalConn, DataArrayIdType *nodalConnIndex)
{
if(nodalConn)
nodalConn->incrRef();
}
/*!
- * \return DataArrayInt * - the internal reference to the nodal connectivity. The caller is not reponsible to deallocate it.
+ * \return DataArrayIdType * - the internal reference to the nodal connectivity. The caller is not responsible to deallocate it.
*/
-DataArrayInt *MEDCoupling1DGTUMesh::getNodalConnectivity() const
+DataArrayIdType *MEDCoupling1DGTUMesh::getNodalConnectivity() const
{
- const DataArrayInt *ret(_conn);
- return const_cast<DataArrayInt *>(ret);
+ const DataArrayIdType *ret(_conn);
+ return const_cast<DataArrayIdType *>(ret);
}
/*!
- * \return DataArrayInt * - the internal reference to the nodal connectivity index. The caller is not reponsible to deallocate it.
+ * \return DataArrayIdType * - the internal reference to the nodal connectivity index. The caller is not responsible to deallocate it.
*/
-DataArrayInt *MEDCoupling1DGTUMesh::getNodalConnectivityIndex() const
+DataArrayIdType *MEDCoupling1DGTUMesh::getNodalConnectivityIndex() const
{
- const DataArrayInt *ret(_conn_indx);
- return const_cast<DataArrayInt *>(ret);
+ const DataArrayIdType *ret(_conn_indx);
+ return const_cast<DataArrayIdType *>(ret);
}
/*!
*/
MEDCoupling1DGTUMesh *MEDCoupling1DGTUMesh::copyWithNodalConnectivityPacked(bool& isShallowCpyOfNodalConnn) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
- DataArrayInt *nc=0,*nci=0;
+ MCAuto<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
+ DataArrayIdType *nc=0,*nci=0;
isShallowCpyOfNodalConnn=retrievePackedNodalConnectivity(nc,nci);
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ncs(nc),ncis(nci);
+ MCAuto<DataArrayIdType> ncs(nc),ncis(nci);
ret->_conn=ncs; ret->_conn_indx=ncis;
ret->setCoords(getCoords());
return ret.retn();
/*!
* This method allows to compute, if needed, the packed nodal connectivity pair.
- * Indeed, it is possible to store in \a this a nodal connectivity array bigger than ranges convered by nodal connectivity index array.
+ * Indeed, it is possible to store in \a this a nodal connectivity array bigger than ranges covered by nodal connectivity index array.
* It is typically the case when nodalConnIndx starts with an id greater than 0, and finishes with id less than number of tuples in \c this->_conn.
*
* If \a this looks packed (the front of nodal connectivity index equal to 0 and back of connectivity index equal to number of tuple of nodal connectivity array)
* \return bool - an indication of the content of the 2 output parameters. If true, \a this looks packed (general case), if true, \a this is not packed then
* output parameters are newly created objects.
*
- * \throw if \a this does not pass MEDCoupling1DGTUMesh::checkCoherency test
+ * \throw if \a this does not pass MEDCoupling1DGTUMesh::checkConsistencyLight test
*/
-bool MEDCoupling1DGTUMesh::retrievePackedNodalConnectivity(DataArrayInt *&nodalConn, DataArrayInt *&nodalConnIndx) const
+bool MEDCoupling1DGTUMesh::retrievePackedNodalConnectivity(DataArrayIdType *&nodalConn, DataArrayIdType *&nodalConnIndx) const
{
- if(isPacked())//performs the checkCoherency
+ if(isPacked())//performs the checkConsistencyLight
{
- const DataArrayInt *c0(_conn),*c1(_conn_indx);
- nodalConn=const_cast<DataArrayInt *>(c0); nodalConnIndx=const_cast<DataArrayInt *>(c1);
+ const DataArrayIdType *c0(_conn),*c1(_conn_indx);
+ nodalConn=const_cast<DataArrayIdType *>(c0); nodalConnIndx=const_cast<DataArrayIdType *>(c1);
nodalConn->incrRef(); nodalConnIndx->incrRef();
return true;
}
- int bg=_conn_indx->front(),end=_conn_indx->back();
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> nc(_conn->selectByTupleId2(bg,end,1));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> nci(_conn_indx->deepCpy());
+ mcIdType bg=_conn_indx->front(),end=_conn_indx->back();
+ MCAuto<DataArrayIdType> nc(_conn->selectByTupleIdSafeSlice(bg,end,1));
+ MCAuto<DataArrayIdType> nci(_conn_indx->deepCopy());
nci->applyLin(1,-bg);
nodalConn=nc.retn(); nodalConnIndx=nci.retn();
return false;
* If nodal connectivity index points to a subpart of nodal connectivity index false will be returned.
* \return bool - true if \a this looks packed, false is not.
*
- * \throw if \a this does not pass MEDCoupling1DGTUMesh::checkCoherency test
+ * \throw if \a this does not pass MEDCoupling1DGTUMesh::checkConsistencyLight test
*/
bool MEDCoupling1DGTUMesh::isPacked() const
{
- checkCoherency();
+ checkConsistencyLight();
return _conn_indx->front()==0 && _conn_indx->back()==_conn->getNumberOfTuples();
}
for(std::size_t ii=0;ii<sz;ii++)
if(&(a[ii]->getCellModel())!=cm)
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::Merge1DGTUMeshes : all items must have the same geo type !");
- std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> > bb(sz);
+ std::vector< MCAuto<MEDCoupling1DGTUMesh> > bb(sz);
std::vector< const MEDCoupling1DGTUMesh * > aa(sz);
- int spaceDim=-3;
- for(std::size_t i=0;i<sz && spaceDim==-3;i++)
+ std::size_t spaceDimUndef=-3, spaceDim=spaceDimUndef;
+ for(std::size_t i=0;i<sz && spaceDim==spaceDimUndef;i++)
{
const MEDCoupling1DGTUMesh *cur=a[i];
const DataArrayDouble *coo=cur->getCoords();
if(coo)
spaceDim=coo->getNumberOfComponents();
}
- if(spaceDim==-3)
+ if(spaceDim==spaceDimUndef)
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::Merge1DGTUMeshes : no spaceDim specified ! unable to perform merge !");
for(std::size_t i=0;i<sz;i++)
{
std::vector<const MEDCoupling1DGTUMesh *>::const_iterator it=a.begin();
if(!(*it))
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::Merge1DGTUMeshesOnSameCoords : null instance in the first element of input vector !");
- std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> > objs(a.size());
- std::vector<const DataArrayInt *> ncs(a.size()),ncis(a.size());
+ std::vector< MCAuto<MEDCoupling1DGTUMesh> > objs(a.size());
+ std::vector<const DataArrayIdType *> ncs(a.size()),ncis(a.size());
(*it)->getNumberOfCells();//to check that all is OK
const DataArrayDouble *coords=(*it)->getCoords();
const INTERP_KERNEL::CellModel *cm=&((*it)->getCellModel());
if(coords!=(*it)->getCoords())
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::Merge1DGTUMeshesOnSameCoords : not lying on same coords !");
}
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh("merge",*cm));
+ MCAuto<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh("merge",*cm));
ret->setCoords(coords);
- ret->_conn=DataArrayInt::Aggregate(ncs);
- ret->_conn_indx=DataArrayInt::AggregateIndexes(ncis);
+ ret->_conn=DataArrayIdType::Aggregate(ncs);
+ ret->_conn_indx=DataArrayIdType::AggregateIndexes(ncis);
return ret.retn();
}
{
if(a.empty())
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::Merge1DGTUMeshes : input array must be NON EMPTY !");
- std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> > objs(a.size());
- std::vector<const DataArrayInt *> ncs(a.size()),ncis(a.size());
+ std::vector< MCAuto<MEDCoupling1DGTUMesh> > objs(a.size());
+ std::vector<const DataArrayIdType *> ncs(a.size()),ncis(a.size());
std::vector<const MEDCoupling1DGTUMesh *>::const_iterator it=a.begin();
- std::vector<int> nbNodesPerElt(a.size());
- int nbOfCells=(*it)->getNumberOfCells();
+ std::vector<mcIdType> nbNodesPerElt(a.size());
+ std::size_t nbOfCells=(*it)->getNumberOfCells();
bool tmp;
objs[0]=(*it)->copyWithNodalConnectivityPacked(tmp);
ncs[0]=objs[0]->getNodalConnectivity(); ncis[0]=objs[0]->getNodalConnectivityIndex();
nbNodesPerElt[0]=0;
- int prevNbOfNodes=(*it)->getNumberOfNodes();
+ mcIdType prevNbOfNodes=(*it)->getNumberOfNodes();
const INTERP_KERNEL::CellModel *cm=&((*it)->getCellModel());
it++;
for(int i=1;it!=a.end();i++,it++)
}
std::vector<const MEDCouplingPointSet *> aps(a.size());
std::copy(a.begin(),a.end(),aps.begin());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> pts=MergeNodesArray(aps);
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh("merge",*cm));
+ MCAuto<DataArrayDouble> pts=MergeNodesArray(aps);
+ MCAuto<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh("merge",*cm));
ret->setCoords(pts);
ret->_conn=AggregateNodalConnAndShiftNodeIds(ncs,nbNodesPerElt);
- ret->_conn_indx=DataArrayInt::AggregateIndexes(ncis);
+ ret->_conn_indx=DataArrayIdType::AggregateIndexes(ncis);
return ret.retn();
}
-MEDCoupling1DGTUMesh *MEDCoupling1DGTUMesh::buildSetInstanceFromThis(int spaceDim) const
+MEDCoupling1DGTUMesh *MEDCoupling1DGTUMesh::buildSetInstanceFromThis(std::size_t spaceDim) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp1,tmp2;
- const DataArrayInt *nodalConn(_conn),*nodalConnI(_conn_indx);
+ MCAuto<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
+ MCAuto<DataArrayIdType> tmp1,tmp2;
+ const DataArrayIdType *nodalConn(_conn),*nodalConnI(_conn_indx);
if(!nodalConn)
{
- tmp1=DataArrayInt::New(); tmp1->alloc(0,1);
+ tmp1=DataArrayIdType::New(); tmp1->alloc(0,1);
}
else
tmp1=_conn;
//
if(!nodalConnI)
{
- tmp2=DataArrayInt::New(); tmp2->alloc(1,1); tmp2->setIJ(0,0,0);
+ tmp2=DataArrayIdType::New(); tmp2->alloc(1,1); tmp2->setIJ(0,0,0);
}
else
tmp2=_conn_indx;
//
if(!_coords)
{
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> coords=DataArrayDouble::New(); coords->alloc(0,spaceDim);
+ MCAuto<DataArrayDouble> coords=DataArrayDouble::New(); coords->alloc(0,spaceDim);
ret->setCoords(coords);
}
else
DataArrayDouble *MEDCoupling1DGTUMesh::getBoundingBoxForBBTree(double arcDetEps) const
{
checkFullyDefined();
- int spaceDim(getSpaceDimension()),nbOfCells(getNumberOfCells()),nbOfNodes(getNumberOfNodes());
- MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret(DataArrayDouble::New()); ret->alloc(nbOfCells,2*spaceDim);
+ mcIdType spaceDim(getSpaceDimension()),nbOfCells(getNumberOfCells()),nbOfNodes(getNumberOfNodes());
+ MCAuto<DataArrayDouble> ret(DataArrayDouble::New()); ret->alloc(nbOfCells,2*spaceDim);
double *bbox(ret->getPointer());
- for(int i=0;i<nbOfCells*spaceDim;i++)
+ for(mcIdType i=0;i<nbOfCells*spaceDim;i++)
{
bbox[2*i]=std::numeric_limits<double>::max();
bbox[2*i+1]=-std::numeric_limits<double>::max();
}
const double *coordsPtr(_coords->getConstPointer());
- const int *conn(_conn->getConstPointer()),*connI(_conn_indx->getConstPointer());
- for(int i=0;i<nbOfCells;i++)
+ const mcIdType *conn(_conn->getConstPointer()),*connI(_conn_indx->getConstPointer());
+ for(mcIdType i=0;i<nbOfCells;i++)
{
- int offset=connI[i];
- int nbOfNodesForCell(connI[i+1]-offset),kk(0);
- for(int j=0;j<nbOfNodesForCell;j++)
+ mcIdType offset=connI[i];
+ mcIdType nbOfNodesForCell(connI[i+1]-offset),kk(0);
+ for(mcIdType j=0;j<nbOfNodesForCell;j++)
{
- int nodeId=conn[offset+j];
+ mcIdType nodeId=conn[offset+j];
if(nodeId>=0 && nodeId<nbOfNodes)
{
for(int k=0;k<spaceDim;k++)
return ret.retn();
}
-std::vector<int> MEDCoupling1DGTUMesh::BuildAPolygonFromParts(const std::vector< std::vector<int> >& parts)
+/*!
+ * Returns the cell field giving for each cell in \a this its diameter. Diameter means the max length of all possible SEG2 in the cell.
+ *
+ * \return a new instance of field containing the result. The returned instance has to be deallocated by the caller.
+ */
+MEDCouplingFieldDouble *MEDCoupling1DGTUMesh::computeDiameterField() const
+{
+ throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::computeDiameterField : not implemented yet for dynamic types !");
+}
+
+std::vector<mcIdType> MEDCoupling1DGTUMesh::BuildAPolygonFromParts(const std::vector< std::vector<mcIdType> >& parts)
{
- std::vector<int> ret;
+ std::vector<mcIdType> ret;
if(parts.empty())
return ret;
ret.insert(ret.end(),parts[0].begin(),parts[0].end());
- int ref(ret.back());
+ mcIdType ref(ret.back());
std::size_t sz(parts.size()),nbh(1);
std::vector<bool> b(sz,true); b[0]=false;
while(nbh<sz)
}
/*!
- * This method performs an aggregation of \a nodalConns (as DataArrayInt::Aggregate does) but in addition of that a shift is applied on the
+ * This method invert orientation of all cells in \a this.
+ * After calling this method the absolute value of measure of cells in \a this are the same than before calling.
+ * This method only operates on the connectivity so coordinates are not touched at all.
+ */
+void MEDCoupling1DGTUMesh::invertOrientationOfAllCells()
+{
+ checkConsistencyOfConnectivity();
+ INTERP_KERNEL::AutoCppPtr<INTERP_KERNEL::OrientationInverter> oi(INTERP_KERNEL::OrientationInverter::BuildInstanceFrom(getCellModelEnum()));
+ mcIdType nbCells=getNumberOfCells();
+ const mcIdType *connI(_conn_indx->begin());
+ mcIdType *conn(_conn->getPointer());
+ for(mcIdType i=0;i<nbCells;i++)
+ oi->operate(conn+connI[i],conn+connI[i+1]);
+ updateTime();
+}
+
+/*!
+ * This method performs an aggregation of \a nodalConns (as DataArrayIdType::Aggregate does) but in addition of that a shift is applied on the
* values contained in \a nodalConns using corresponding offset specified in input \a offsetInNodeIdsPerElt.
* But it also manage the values -1, that have a semantic in MEDCoupling1DGTUMesh class (separator for polyhedron).
*
* \param [in] nodalConns - a list of nodal connectivity arrays same size than \a offsetInNodeIdsPerElt.
* \param [in] offsetInNodeIdsPerElt - a list of offsets to apply.
- * \return DataArrayInt * - A new object (to be managed by the caller) that is the result of the aggregation.
+ * \return DataArrayIdType * - A new object (to be managed by the caller) that is the result of the aggregation.
* \throw If \a nodalConns or \a offsetInNodeIdsPerElt are empty.
* \throw If \a nodalConns and \a offsetInNodeIdsPerElt have not the same size.
* \throw If presence of null pointer in \a nodalConns.
* \throw If presence of not allocated or array with not exactly one component in \a nodalConns.
*/
-DataArrayInt *MEDCoupling1DGTUMesh::AggregateNodalConnAndShiftNodeIds(const std::vector<const DataArrayInt *>& nodalConns, const std::vector<int>& offsetInNodeIdsPerElt)
+DataArrayIdType *MEDCoupling1DGTUMesh::AggregateNodalConnAndShiftNodeIds(const std::vector<const DataArrayIdType *>& nodalConns, const std::vector<mcIdType>& offsetInNodeIdsPerElt)
{
std::size_t sz1(nodalConns.size()),sz2(offsetInNodeIdsPerElt.size());
if(sz1!=sz2)
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::AggregateNodalConnAndShiftNodeIds : input vectors do not have the same size !");
if(sz1==0)
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::AggregateNodalConnAndShiftNodeIds : empty vectors in input !");
- int nbOfTuples=0;
- for(std::vector<const DataArrayInt *>::const_iterator it=nodalConns.begin();it!=nodalConns.end();it++)
+ mcIdType nbOfTuples=0;
+ for(std::vector<const DataArrayIdType *>::const_iterator it=nodalConns.begin();it!=nodalConns.end();it++)
{
if(!(*it))
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::AggregateNodalConnAndShiftNodeIds : presence of null pointer in input vector !");
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::AggregateNodalConnAndShiftNodeIds : presence of array with not exactly one component !");
nbOfTuples+=(*it)->getNumberOfTuples();
}
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret=DataArrayInt::New(); ret->alloc(nbOfTuples,1);
- int *pt=ret->getPointer();
- int i=0;
- for(std::vector<const DataArrayInt *>::const_iterator it=nodalConns.begin();it!=nodalConns.end();it++,i++)
+ MCAuto<DataArrayIdType> ret=DataArrayIdType::New(); ret->alloc(nbOfTuples,1);
+ mcIdType *pt=ret->getPointer();
+ mcIdType i=0;
+ for(std::vector<const DataArrayIdType *>::const_iterator it=nodalConns.begin();it!=nodalConns.end();it++,i++)
{
- int curNbt=(*it)->getNumberOfTuples();
- const int *inPt=(*it)->begin();
- int offset=offsetInNodeIdsPerElt[i];
- for(int j=0;j<curNbt;j++,pt++)
+ mcIdType curNbt=(*it)->getNumberOfTuples();
+ const mcIdType *inPt=(*it)->begin();
+ mcIdType offset=offsetInNodeIdsPerElt[i];
+ for(mcIdType j=0;j<curNbt;j++,pt++)
{
if(inPt[j]!=-1)
*pt=inPt[j]+offset;
std::set<INTERP_KERNEL::NormalizedCellType> gts(m->getAllGeoTypes());
if(gts.size()!=1)
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::New : input mesh must have exactly one geometric type !");
- int geoType((int)*gts.begin());
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(m->getName(),*gts.begin()));
+ mcIdType geoType(ToIdType(*gts.begin()));
+ MCAuto<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(m->getName(),*gts.begin()));
ret->setCoords(m->getCoords()); ret->setDescription(m->getDescription());
- int nbCells(m->getNumberOfCells());
- MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn(DataArrayInt::New()),connI(DataArrayInt::New());
- conn->alloc(m->getMeshLength()-nbCells,1); connI->alloc(nbCells+1,1);
- int *c(conn->getPointer()),*ci(connI->getPointer()); *ci=0;
- const int *cin(m->getNodalConnectivity()->begin()),*ciin(m->getNodalConnectivityIndex()->begin());
- for(int i=0;i<nbCells;i++,ciin++,ci++)
+ mcIdType nbCells=m->getNumberOfCells();
+ MCAuto<DataArrayIdType> conn(DataArrayIdType::New()),connI(DataArrayIdType::New());
+ conn->alloc(m->getNodalConnectivityArrayLen()-nbCells,1); connI->alloc(nbCells+1,1);
+ mcIdType *c(conn->getPointer()),*ci(connI->getPointer()); *ci=0;
+ const mcIdType *cin(m->getNodalConnectivity()->begin()),*ciin(m->getNodalConnectivityIndex()->begin());
+ for(mcIdType i=0;i<nbCells;i++,ciin++,ci++)
{
if(cin[ciin[0]]==geoType)
{