-// Copyright (C) 2007-2013 CEA/DEN, EDF R&D
+// Copyright (C) 2007-2014 CEA/DEN, EDF R&D
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
-// version 2.1 of the License.
+// version 2.1 of the License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
using namespace ParaMEDMEM;
-MEDCoupling1GTUMesh::MEDCoupling1GTUMesh()
+const int MEDCoupling1SGTUMesh::HEXA8_FACE_PAIRS[6]={0,1,2,4,3,5};
+
+MEDCoupling1GTUMesh::MEDCoupling1GTUMesh():_cm(0)
{
}
-MEDCoupling1GTUMesh::MEDCoupling1GTUMesh(const char *name, const INTERP_KERNEL::CellModel& cm):_cm(&cm)
+MEDCoupling1GTUMesh::MEDCoupling1GTUMesh(const std::string& name, const INTERP_KERNEL::CellModel& cm):_cm(&cm)
{
setName(name);
}
{
}
-MEDCoupling1GTUMesh *MEDCoupling1GTUMesh::New(const char *name, INTERP_KERNEL::NormalizedCellType type)
+MEDCoupling1GTUMesh *MEDCoupling1GTUMesh::New(const std::string& name, INTERP_KERNEL::NormalizedCellType type)
{
if(type==INTERP_KERNEL::NORM_ERROR)
throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::New : NORM_ERROR is not a valid type to be used as base geometric type for a mesh !");
throw INTERP_KERNEL::Exception("MEDCoupling1GTUMesh::AggregateOnSameCoordsToUMesh : the first instance in input parts is null !");
const DataArrayDouble *coords(firstPart->getCoords());
int meshDim(firstPart->getMeshDimension());
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret(MEDCouplingUMesh::New(firstPart->getName().c_str(),meshDim)); ret->setDescription(firstPart->getDescription().c_str());
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret(MEDCouplingUMesh::New(firstPart->getName(),meshDim)); ret->setDescription(firstPart->getDescription());
ret->setCoords(coords);
int nbOfCells(0),connSize(0);
for(std::vector< const MEDCoupling1GTUMesh *>::const_iterator it=parts.begin();it!=parts.end();it++)
}
}
-MEDCoupling1SGTUMesh::MEDCoupling1SGTUMesh(const char *name, const INTERP_KERNEL::CellModel& cm):MEDCoupling1GTUMesh(name,cm)
+MEDCoupling1SGTUMesh::MEDCoupling1SGTUMesh(const std::string& name, const INTERP_KERNEL::CellModel& cm):MEDCoupling1GTUMesh(name,cm)
{
}
return new MEDCoupling1SGTUMesh;
}
-MEDCoupling1SGTUMesh *MEDCoupling1SGTUMesh::New(const char *name, INTERP_KERNEL::NormalizedCellType type)
+MEDCoupling1SGTUMesh *MEDCoupling1SGTUMesh::New(const std::string& name, INTERP_KERNEL::NormalizedCellType type)
{
if(type==INTERP_KERNEL::NORM_ERROR)
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::New : NORM_ERROR is not a valid type to be used as base geometric type for a mesh !");
if(gts.size()!=1)
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::New : input mesh must have exactly one geometric type !");
int geoType((int)*gts.begin());
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(MEDCoupling1SGTUMesh::New(m->getName().c_str(),*gts.begin()));
- ret->setCoords(m->getCoords()); ret->setDescription(m->getDescription().c_str());
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(MEDCoupling1SGTUMesh::New(m->getName(),*gts.begin()));
+ ret->setCoords(m->getCoords()); ret->setDescription(m->getDescription());
int nbCells(m->getNumberOfCells());
int nbOfNodesPerCell(ret->getNumberOfNodesPerCell());
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn(DataArrayInt::New()); conn->alloc(nbCells*nbOfNodesPerCell,1);
{
if(_conn->getNumberOfComponents()==1)
{
- int nbOfCells=getNumberOfCells();
- int sz=getNumberOfNodesPerCell();
- const int *connPtr=_conn->begin();
- for(int i=0;i<nbOfCells;i++,connPtr+=sz)
- {
- ret << "Cell #" << i << " : ";
- std::copy(connPtr,connPtr+sz,std::ostream_iterator<int>(ret," "));
- ret << "\n";
- }
+ int nbOfCells=getNumberOfCells();
+ int sz=getNumberOfNodesPerCell();
+ const int *connPtr=_conn->begin();
+ for(int i=0;i<nbOfCells;i++,connPtr+=sz)
+ {
+ ret << "Cell #" << i << " : ";
+ std::copy(connPtr,connPtr+sz,std::ostream_iterator<int>(ret," "));
+ ret << "\n";
+ }
}
else
ret << "Nodal connectivity array specified and allocated but with not exactly one component !" << "\n";
MEDCouplingUMesh *MEDCoupling1SGTUMesh::buildUnstructured() const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName().c_str(),getMeshDimension());
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName(),getMeshDimension());
ret->setCoords(getCoords());
const int *nodalConn=_conn->begin();
int nbCells=getNumberOfCells();
DataArrayInt *MEDCoupling1SGTUMesh::simplexize(int policy)
{
switch(policy)
- {
+ {
case 0:
return simplexizePol0();
case 1:
return simplexizePol1();
case (int) INTERP_KERNEL::PLANAR_FACE_5:
- return simplexizePlanarFace5();
+ return simplexizePlanarFace5();
case (int) INTERP_KERNEL::PLANAR_FACE_6:
- return simplexizePlanarFace6();
+ return simplexizePlanarFace6();
default:
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::simplexize : unrecognized policy ! Must be :\n - 0 or 1 (only available for meshdim=2) \n - PLANAR_FACE_5, PLANAR_FACE_6 (only for meshdim=3)");
- }
+ }
}
/// @cond INTERNAL
if(!(*it))
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::Merge1SGTUMeshesOnSameCoords : null instance in the first element of input vector !");
std::vector<const DataArrayInt *> ncs(a.size());
- int nbOfCells=(*it)->getNumberOfCells();
+ (*it)->getNumberOfCells();//to check that all is OK
const DataArrayDouble *coords=(*it)->getCoords();
const INTERP_KERNEL::CellModel *cm=&((*it)->getCellModel());
- int nbNodesPerCell=(*it)->getNumberOfNodesPerCell();
ncs[0]=(*it)->getNodalConnectivity();
it++;
for(int i=1;it!=a.end();i++,it++)
MEDCouplingPointSet *MEDCoupling1SGTUMesh::buildPartOfMySelfKeepCoords(const int *begin, const int *end) const
{
int ncell=getNumberOfCells();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName().c_str(),*_cm));
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName(),*_cm));
ret->setCoords(_coords);
std::size_t nbOfElemsRet=std::distance(begin,end);
const int *inConn=_conn->getConstPointer();
{
int ncell=getNumberOfCells();
int nbOfElemsRet=DataArray::GetNumberOfItemGivenBESRelative(start,end,step,"MEDCoupling1SGTUMesh::buildPartOfMySelfKeepCoords2 : ");
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName().c_str(),*_cm));
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName(),*_cm));
ret->setCoords(_coords);
const int *inConn=_conn->getConstPointer();
int sz=getNumberOfNodesPerCell();
MEDCoupling1SGTUMesh *MEDCoupling1SGTUMesh::buildSetInstanceFromThis(int spaceDim) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName().c_str(),*_cm));
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(new MEDCoupling1SGTUMesh(getName(),*_cm));
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp1;
const DataArrayInt *nodalConn(_conn);
if(!nodalConn)
{
INTERP_KERNEL::NormalizedCellType gt((INTERP_KERNEL::NormalizedCellType)tinyInfo[0]);
_cm=&INTERP_KERNEL::CellModel::GetCellModel(gt);
- setName(littleStrings[0].c_str());
- setDescription(littleStrings[1].c_str());
- setTimeUnit(littleStrings[2].c_str());
+ setName(littleStrings[0]);
+ setDescription(littleStrings[1]);
+ setTimeUnit(littleStrings[2]);
setTime(tinyInfoD[0],tinyInfo[1],tinyInfo[2]);
int sz0(tinyInfo[3]),sz1(tinyInfo[4]),sz2(tinyInfo[5]),sz3(tinyInfo[6]);
//
if(!cm.isSimplex())
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::computeDualMesh : this mesh is not a simplex mesh ! Please invoke simplexize of tetrahedrize on this before calling this method !");
switch(getMeshDimension())
- {
+ {
case 3:
return computeDualMesh3D();
case 2:
return computeDualMesh2D();
default:
throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::computeDualMesh : meshdimension must be in [2,3] !");
+ }
+}
+
+/*!
+ * This method explode each NORM_HEXA8 cells in \a this into 6 NORM_QUAD4 cells and put the result into the MEDCoupling1SGTUMesh returned instance.
+ *
+ * \return MEDCoupling1SGTUMesh * - a newly allocated instances (to be managed by the caller) storing the result of the explosion.
+ * \throw If \a this is not a mesh containing only NORM_HEXA8 cells.
+ * \throw If \a this is not properly allocated.
+ */
+MEDCoupling1SGTUMesh *MEDCoupling1SGTUMesh::explodeEachHexa8To6Quad4() const
+{
+ const INTERP_KERNEL::CellModel& cm(getCellModel());
+ if(cm.getEnum()!=INTERP_KERNEL::NORM_HEXA8)
+ throw INTERP_KERNEL::Exception("MEDCoupling1SGTUMesh::explodeEachHexa8To6Quad4 : this method can be applied only on HEXA8 mesh !");
+ int nbHexa8(getNumberOfCells());
+ const int *inConnPtr(getNodalConnectivity()->begin());
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> ret(MEDCoupling1SGTUMesh::New(getName(),INTERP_KERNEL::NORM_QUAD4));
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> c(DataArrayInt::New()); c->alloc(nbHexa8*6*4,1);
+ int *cPtr(c->getPointer());
+ for(int i=0;i<nbHexa8;i++,inConnPtr+=8)
+ {
+ for(int j=0;j<6;j++,cPtr+=4)
+ cm.fillSonCellNodalConnectivity(j,inConnPtr,cPtr);
+ }
+ ret->setCoords(getCoords());
+ ret->setNodalConnectivity(c);
+ return ret.retn();
+}
+
+/// @cond INTERNAL
+
+bool UpdateHexa8Cell(int validAxis, int neighId, const int *validConnQuad4NeighSide, int *allFacesNodalConn, int *myNeighbours)
+{
+ static const int TAB[48]={
+ 0,1,2,3,4,5,6,7,//0
+ 4,7,6,5,0,3,2,1,//1
+ 0,3,7,4,1,2,6,5,//2
+ 4,0,3,7,5,1,2,6,//3
+ 5,1,0,4,6,2,3,7,//4
+ 3,7,4,0,2,6,5,1 //5
+ };
+ static const int TAB2[6]={0,0,3,3,3,3};
+ if(myNeighbours[validAxis]==neighId && allFacesNodalConn[4*validAxis+0]==validConnQuad4NeighSide[TAB2[validAxis]])
+ return true;
+ int oldAxis((int)std::distance(myNeighbours,std::find(myNeighbours,myNeighbours+6,neighId)));
+ std::size_t pos(std::distance(MEDCoupling1SGTUMesh::HEXA8_FACE_PAIRS,std::find(MEDCoupling1SGTUMesh::HEXA8_FACE_PAIRS,MEDCoupling1SGTUMesh::HEXA8_FACE_PAIRS+6,oldAxis)));
+ std::size_t pos0(pos/2),pos1(pos%2);
+ int oldAxisOpp(MEDCoupling1SGTUMesh::HEXA8_FACE_PAIRS[2*pos0+(pos1+1)%2]);
+ int oldConn[8],myConn2[8]={-1,-1,-1,-1,-1,-1,-1,-1},myConn[8],edgeConn[2],allFacesTmp[24],neighTmp[6];
+ oldConn[0]=allFacesNodalConn[0]; oldConn[1]=allFacesNodalConn[1]; oldConn[2]=allFacesNodalConn[2]; oldConn[3]=allFacesNodalConn[3];
+ oldConn[4]=allFacesNodalConn[4]; oldConn[5]=allFacesNodalConn[7]; oldConn[6]=allFacesNodalConn[6]; oldConn[7]=allFacesNodalConn[5];
+ const INTERP_KERNEL::CellModel& cm(INTERP_KERNEL::CellModel::GetCellModel(INTERP_KERNEL::NORM_HEXA8));
+ for(int i=0;i<4;i++)
+ myConn2[i]=validConnQuad4NeighSide[(4-i+TAB2[validAxis])%4];
+ for(int i=0;i<4;i++)
+ {
+ int nodeId(myConn2[i]);//the node id for which the opposite one will be found
+ bool found(false);
+ INTERP_KERNEL::NormalizedCellType typeOfSon;
+ for(int j=0;j<12 && !found;j++)
+ {
+ cm.fillSonEdgesNodalConnectivity3D(j,oldConn,-1,edgeConn,typeOfSon);
+ if(edgeConn[0]==nodeId || edgeConn[1]==nodeId)
+ {
+ if(std::find(allFacesNodalConn+4*oldAxisOpp,allFacesNodalConn+4*oldAxisOpp+4,edgeConn[0]==nodeId?edgeConn[1]:edgeConn[0])!=allFacesNodalConn+4*oldAxisOpp+4)
+ {
+ myConn2[i+4]=edgeConn[0]==nodeId?edgeConn[1]:edgeConn[0];
+ found=true;
+ }
+ }
+ }
+ if(!found)
+ throw INTERP_KERNEL::Exception("UpdateHexa8Cell : Internal Error !");
+ }
+ const int *myTab(TAB+8*validAxis);
+ for(int i=0;i<8;i++)
+ myConn[i]=myConn2[myTab[i]];
+ for(int i=0;i<6;i++)
+ {
+ cm.fillSonCellNodalConnectivity(i,myConn,allFacesTmp+4*i);
+ std::set<int> s(allFacesTmp+4*i,allFacesTmp+4*i+4);
+ bool found(false);
+ for(int j=0;j<6 && !found;j++)
+ {
+ std::set<int> s1(allFacesNodalConn+4*j,allFacesNodalConn+4*j+4);
+ if(s==s1)
+ {
+ neighTmp[i]=myNeighbours[j];
+ found=true;
+ }
+ }
+ if(!found)
+ throw INTERP_KERNEL::Exception("UpdateHexa8Cell : Internal Error #2 !");
}
+ std::copy(allFacesTmp,allFacesTmp+24,allFacesNodalConn);
+ std::copy(neighTmp,neighTmp+6,myNeighbours);
+ return false;
+}
+
+/// @endcond
+
+/*!
+ * This method expects the \a this contains NORM_HEXA8 cells only. This method will sort each cells in \a this so that their numbering was
+ * homogeneous. If it succeeds the result of MEDCouplingUMesh::tetrahedrize will return a conform mesh.
+ *
+ * \return DataArrayInt * - a newly allocated array (to be managed by the caller) containing renumbered cell ids.
+ *
+ * \throw If \a this is not a mesh containing only NORM_HEXA8 cells.
+ * \throw If \a this is not properly allocated.
+ * \sa MEDCouplingUMesh::tetrahedrize, MEDCouplingUMesh::simplexize.
+ */
+DataArrayInt *MEDCoupling1SGTUMesh::sortHexa8EachOther()
+{
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1SGTUMesh> quads(explodeEachHexa8To6Quad4());//checks that only hexa8
+ int nbHexa8(getNumberOfCells()),*cQuads(quads->getNodalConnectivity()->getPointer());
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> neighOfQuads(DataArrayInt::New()); neighOfQuads->alloc(nbHexa8*6,1); neighOfQuads->fillWithValue(-1);
+ int *ptNeigh(neighOfQuads->getPointer());
+ {//neighOfQuads tells for each face of each Quad8 which cell (if!=-1) is connected to this face.
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> quadsTmp(quads->buildUnstructured());
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ccSafe,cciSafe;
+ DataArrayInt *cc(0),*cci(0);
+ quadsTmp->findCommonCells(3,0,cc,cci);
+ ccSafe=cc; cciSafe=cci;
+ const int *ccPtr(ccSafe->begin()),nbOfPair(cci->getNumberOfTuples()-1);
+ for(int i=0;i<nbOfPair;i++)
+ { ptNeigh[ccPtr[2*i+0]]=ccPtr[2*i+1]/6; ptNeigh[ccPtr[2*i+1]]=ccPtr[2*i+0]/6; }
+ }
+ MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ret(DataArrayInt::New()); ret->alloc(0,1);
+ std::vector<bool> fetched(nbHexa8,false);
+ std::vector<bool>::iterator it(std::find(fetched.begin(),fetched.end(),false));
+ while(it!=fetched.end())//it will turns as time as number of connected zones
+ {
+ int cellId((int)std::distance(fetched.begin(),it));//it is the seed of the connected zone.
+ std::set<int> s; s.insert(cellId);//s contains already organized.
+ while(!s.empty())
+ {
+ std::set<int> sNext;
+ for(std::set<int>::const_iterator it0=s.begin();it0!=s.end();it0++)
+ {
+ fetched[*it0]=true;
+ int *myNeighb(ptNeigh+6*(*it0));
+ for(int i=0;i<6;i++)
+ {
+ if(myNeighb[i]!=-1 && !fetched[myNeighb[i]])
+ {
+ std::size_t pos(std::distance(HEXA8_FACE_PAIRS,std::find(HEXA8_FACE_PAIRS,HEXA8_FACE_PAIRS+6,i)));
+ std::size_t pos0(pos/2),pos1(pos%2);
+ if(!UpdateHexa8Cell(HEXA8_FACE_PAIRS[2*pos0+(pos1+1)%2],*it0,cQuads+6*4*(*it0)+4*i,cQuads+6*4*myNeighb[i],ptNeigh+6*myNeighb[i]))
+ ret->pushBackSilent(myNeighb[i]);
+ fetched[myNeighb[i]]=true;
+ sNext.insert(myNeighb[i]);
+ }
+ }
+ }
+ s=sNext;
+ }
+ it=std::find(fetched.begin(),fetched.end(),false);
+ }
+ if(!ret->empty())
+ {
+ int *conn(getNodalConnectivity()->getPointer());
+ for(const int *pt=ret->begin();pt!=ret->end();pt++)
+ {
+ int cellId(*pt);
+ conn[8*cellId+0]=cQuads[24*cellId+0]; conn[8*cellId+1]=cQuads[24*cellId+1]; conn[8*cellId+2]=cQuads[24*cellId+2]; conn[8*cellId+3]=cQuads[24*cellId+3];
+ conn[8*cellId+4]=cQuads[24*cellId+4]; conn[8*cellId+5]=cQuads[24*cellId+7]; conn[8*cellId+6]=cQuads[24*cellId+6]; conn[8*cellId+7]=cQuads[24*cellId+5];
+ }
+ declareAsNew();
+ }
+ return ret.retn();
}
MEDCoupling1DGTUMesh *MEDCoupling1SGTUMesh::computeDualMesh3D() const
const int *d1(d1Arr->begin());
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> d2Arr(DataArrayInt::New()),di2Arr(DataArrayInt::New()),rd2Arr(DataArrayInt::New()),rdi2Arr(DataArrayInt::New());
MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> faces(thisu->buildDescendingConnectivity(d2Arr,di2Arr,rd2Arr,rdi2Arr)); thisu=0;
- const int *d2(d2Arr->begin()),*rd2(rd2Arr->begin()),*rdi2(rdi2Arr->begin());
+ const int *d2(d2Arr->begin()),*rdi2(rdi2Arr->begin());
MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> edgesBaryArr(edges->getBarycenterAndOwner()),facesBaryArr(faces->getBarycenterAndOwner()),baryArr(getBarycenterAndOwner());
const int nbOfNodes(getNumberOfNodes()),offset0(nbOfNodes+faces->getNumberOfCells()),offset1(offset0+edges->getNumberOfCells());
edges=0; faces=0;
std::vector<const DataArrayDouble *> v(4); v[0]=getCoords(); v[1]=facesBaryArr; v[2]=edgesBaryArr; v[3]=baryArr;
MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> zeArr(DataArrayDouble::Aggregate(v)); baryArr=0; edgesBaryArr=0; facesBaryArr=0;
std::string name("DualOf_"); name+=getName();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(name.c_str(),INTERP_KERNEL::NORM_POLYHED)); ret->setCoords(zeArr);
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(name,INTERP_KERNEL::NORM_POLYHED)); ret->setCoords(zeArr);
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cArr(DataArrayInt::New()),ciArr(DataArrayInt::New()); ciArr->alloc(nbOfNodes+1,1); ciArr->setIJ(0,0,0); cArr->alloc(0,1);
for(int i=0;i<nbOfNodes;i++,revNodI++)
{
const int *revNod(revNodArr->begin()),*revNodI(revNodIArr->begin()),*nodal(_conn->begin());
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> d2Arr(DataArrayInt::New()),di2Arr(DataArrayInt::New()),rd2Arr(DataArrayInt::New()),rdi2Arr(DataArrayInt::New());
MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> edges(thisu->buildDescendingConnectivity(d2Arr,di2Arr,rd2Arr,rdi2Arr)); thisu=0;
- const int *d2(d2Arr->begin()),*rd2(rd2Arr->begin()),*rdi2(rdi2Arr->begin());
+ const int *d2(d2Arr->begin()),*rdi2(rdi2Arr->begin());
MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> edgesBaryArr(edges->getBarycenterAndOwner()),baryArr(getBarycenterAndOwner());
const int nbOfNodes(getNumberOfNodes()),offset0(nbOfNodes+edges->getNumberOfCells());
edges=0;
std::vector<const DataArrayDouble *> v(3); v[0]=getCoords(); v[1]=edgesBaryArr; v[2]=baryArr;
MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> zeArr(DataArrayDouble::Aggregate(v)); baryArr=0; edgesBaryArr=0;
std::string name("DualOf_"); name+=getName();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(name.c_str(),INTERP_KERNEL::NORM_POLYGON)); ret->setCoords(zeArr);
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(name,INTERP_KERNEL::NORM_POLYGON)); ret->setCoords(zeArr);
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> cArr(DataArrayInt::New()),ciArr(DataArrayInt::New()); ciArr->alloc(nbOfNodes+1,1); ciArr->setIJ(0,0,0); cArr->alloc(0,1);
for(int i=0;i<nbOfNodes;i++,revNodI++)
{
/*!
* This method aggregate the bbox of each cell and put it into bbox
*
+ * \param [in] arcDetEps - a parameter specifying in case of 2D quadratic polygon cell the detection limit between linear and arc circle. (By default 1e-12)
+ * For all other cases this input parameter is ignored.
* \return DataArrayDouble * - newly created object (to be managed by the caller) \a this number of cells tuples and 2*spacedim components.
*
* \throw If \a this is not fully set (coordinates and connectivity).
* \throw If a cell in \a this has no valid nodeId.
*/
-DataArrayDouble *MEDCoupling1SGTUMesh::getBoundingBoxForBBTree() const
+DataArrayDouble *MEDCoupling1SGTUMesh::getBoundingBoxForBBTree(double arcDetEps) const
{
int spaceDim(getSpaceDimension()),nbOfCells(getNumberOfCells()),nbOfNodes(getNumberOfNodes()),nbOfNodesPerCell(getNumberOfNodesPerCell());
MEDCouplingAutoRefCountObjectPtr<DataArrayDouble> ret(DataArrayDouble::New()); ret->alloc(nbOfCells,2*spaceDim);
return new MEDCoupling1DGTUMesh;
}
-MEDCoupling1DGTUMesh *MEDCoupling1DGTUMesh::New(const char *name, INTERP_KERNEL::NormalizedCellType type)
+MEDCoupling1DGTUMesh *MEDCoupling1DGTUMesh::New(const std::string& name, INTERP_KERNEL::NormalizedCellType type)
{
if(type==INTERP_KERNEL::NORM_ERROR)
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::New : NORM_ERROR is not a valid type to be used as base geometric type for a mesh !");
{
}
-MEDCoupling1DGTUMesh::MEDCoupling1DGTUMesh(const char *name, const INTERP_KERNEL::CellModel& cm):MEDCoupling1GTUMesh(name,cm)
+MEDCoupling1DGTUMesh::MEDCoupling1DGTUMesh(const std::string& name, const INTERP_KERNEL::CellModel& cm):MEDCoupling1GTUMesh(name,cm)
{
}
ret << "Number of cells : ";
bool isOK=true;
try { checkCoherency(); } catch(INTERP_KERNEL::Exception& /* e */)
- {
+ {
ret << "Nodal connectivity arrays are not set or badly set !\n";
isOK=false;
- }
+ }
if(isOK)
ret << getNumberOfCells() << "\n";
ret << "Cell type : " << _cm->getRepr() << "\n";
//
bool isOK=true;
try { checkCoherency1(); } catch(INTERP_KERNEL::Exception& /* e */)
- {
+ {
ret << "Nodal connectivity arrays are not set or badly set !\n";
isOK=false;
- }
+ }
if(!isOK)
return ret.str();
int nbOfCells=getNumberOfCells();
//
for(int i=0;i<nbCells;i++,conni++)
{
- int sz=conni[1]-conni[0];
int newp=o2nPtr[i];
std::copy(conn+conni[0],conn+conni[1],newC+newCI[newp]);
}
MEDCouplingUMesh *MEDCoupling1DGTUMesh::buildUnstructured() const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName().c_str(),getMeshDimension());
+ MEDCouplingAutoRefCountObjectPtr<MEDCouplingUMesh> ret=MEDCouplingUMesh::New(getName(),getMeshDimension());
ret->setCoords(getCoords());
const int *nodalConn=_conn->begin(),*nodalConnI=_conn_indx->begin();
int nbCells=getNumberOfCells();//checkCoherency
stream << "Number of nodes : " << _coords->getNumberOfTuples() << ".";
bool isOK=true;
try { checkCoherency(); } catch(INTERP_KERNEL::Exception& /* e */)
- {
+ {
stream << std::endl << "Nodal connectivity NOT set properly !\n";
isOK=false;
- }
+ }
if(isOK)
stream << std::endl << "Number of cells : " << getNumberOfCells() << ".";
}
MEDCouplingPointSet *MEDCoupling1DGTUMesh::buildPartOfMySelfKeepCoords(const int *begin, const int *end) const
{
checkCoherency();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName().c_str(),*_cm));
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
ret->setCoords(_coords);
DataArrayInt *c=0,*ci=0;
MEDCouplingUMesh::ExtractFromIndexedArrays(begin,end,_conn,_conn_indx,c,ci);
MEDCouplingPointSet *MEDCoupling1DGTUMesh::buildPartOfMySelfKeepCoords2(int start, int end, int step) const
{
checkCoherency();
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName().c_str(),*_cm));
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
ret->setCoords(_coords);
DataArrayInt *c=0,*ci=0;
MEDCouplingUMesh::ExtractFromIndexedArrays2(start,end,step,_conn,_conn_indx,c,ci);
{
INTERP_KERNEL::NormalizedCellType gt((INTERP_KERNEL::NormalizedCellType)tinyInfo[0]);
_cm=&INTERP_KERNEL::CellModel::GetCellModel(gt);
- setName(littleStrings[0].c_str());
- setDescription(littleStrings[1].c_str());
- setTimeUnit(littleStrings[2].c_str());
+ setName(littleStrings[0]);
+ setDescription(littleStrings[1]);
+ setTimeUnit(littleStrings[2]);
setTime(tinyInfoD[0],tinyInfo[1],tinyInfo[2]);
int sz0(tinyInfo[3]),sz1(tinyInfo[4]),sz2(tinyInfo[5]),sz3(tinyInfo[6]),sz4(tinyInfo[7]),sz5(tinyInfo[8]);
//
*/
MEDCoupling1DGTUMesh *MEDCoupling1DGTUMesh::copyWithNodalConnectivityPacked(bool& isShallowCpyOfNodalConnn) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName().c_str(),*_cm));
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
DataArrayInt *nc=0,*nci=0;
isShallowCpyOfNodalConnn=retrievePackedNodalConnectivity(nc,nci);
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> ncs(nc),ncis(nci);
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::Merge1DGTUMeshesOnSameCoords : null instance in the first element of input vector !");
std::vector< MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> > objs(a.size());
std::vector<const DataArrayInt *> ncs(a.size()),ncis(a.size());
- int nbOfCells=(*it)->getNumberOfCells();
+ (*it)->getNumberOfCells();//to check that all is OK
const DataArrayDouble *coords=(*it)->getCoords();
const INTERP_KERNEL::CellModel *cm=&((*it)->getCellModel());
bool tmp;
MEDCoupling1DGTUMesh *MEDCoupling1DGTUMesh::buildSetInstanceFromThis(int spaceDim) const
{
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName().c_str(),*_cm));
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(new MEDCoupling1DGTUMesh(getName(),*_cm));
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> tmp1,tmp2;
const DataArrayInt *nodalConn(_conn),*nodalConnI(_conn_indx);
if(!nodalConn)
/*!
* This method aggregate the bbox of each cell and put it into bbox parameter.
*
+ * \param [in] arcDetEps - a parameter specifying in case of 2D quadratic polygon cell the detection limit between linear and arc circle. (By default 1e-12)
+ * For all other cases this input parameter is ignored.
* \return DataArrayDouble * - newly created object (to be managed by the caller) \a this number of cells tuples and 2*spacedim components.
*
* \throw If \a this is not fully set (coordinates and connectivity).
* \throw If a cell in \a this has no valid nodeId.
*/
-DataArrayDouble *MEDCoupling1DGTUMesh::getBoundingBoxForBBTree() const
+DataArrayDouble *MEDCoupling1DGTUMesh::getBoundingBoxForBBTree(double arcDetEps) const
{
checkFullyDefined();
int spaceDim(getSpaceDimension()),nbOfCells(getNumberOfCells()),nbOfNodes(getNumberOfNodes());
if(gts.size()!=1)
throw INTERP_KERNEL::Exception("MEDCoupling1DGTUMesh::New : input mesh must have exactly one geometric type !");
int geoType((int)*gts.begin());
- MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(m->getName().c_str(),*gts.begin()));
- ret->setCoords(m->getCoords()); ret->setDescription(m->getDescription().c_str());
+ MEDCouplingAutoRefCountObjectPtr<MEDCoupling1DGTUMesh> ret(MEDCoupling1DGTUMesh::New(m->getName(),*gts.begin()));
+ ret->setCoords(m->getCoords()); ret->setDescription(m->getDescription());
int nbCells(m->getNumberOfCells());
MEDCouplingAutoRefCountObjectPtr<DataArrayInt> conn(DataArrayInt::New()),connI(DataArrayInt::New());
conn->alloc(m->getMeshLength()-nbCells,1); connI->alloc(nbCells+1,1);
