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Debug of CMake build procedure
[tools/medcoupling.git] / doc / doxygen / Doxyfile_med_user.in
index bbf2c1e57c994818a03ec9837a56dae6a35f36ce..18b827dd7838b20b6443b34817deb13c1177a97e 100644 (file)
@@ -1,9 +1,9 @@
-# Copyright (C) 2007-2013  CEA/DEN, EDF R&D, OPEN CASCADE
+# Copyright (C) 2007-2014  CEA/DEN, EDF R&D, OPEN CASCADE
 #
 # This library is free software; you can redistribute it and/or
 # modify it under the terms of the GNU Lesser General Public
 # License as published by the Free Software Foundation; either
-# version 2.1 of the License.
+# version 2.1 of the License, or (at your option) any later version.
 #
 # This library is distributed in the hope that it will be useful,
 # but WITHOUT ANY WARRANTY; without even the implied warranty of
@@ -35,7 +35,7 @@ BRIEF_MEMBER_DESC      = NO
 REPEAT_BRIEF           = YES
 ALWAYS_DETAILED_SEC    = NO
 FULL_PATH_NAMES        = NO
-STRIP_FROM_PATH        = 
+STRIP_FROM_PATH        =
 INTERNAL_DOCS          = NO
 STRIP_CODE_COMMENTS    = YES
 CASE_SENSE_NAMES       = YES
@@ -53,8 +53,8 @@ TAB_SIZE               = 8
 GENERATE_TODOLIST      = YES
 GENERATE_TESTLIST      = YES
 GENERATE_BUGLIST       = YES
-ALIASES                = 
-ENABLED_SECTIONS       = user MEDMEM_ug
+ALIASES                =
+ENABLED_SECTIONS       = user MEDCOUPLING_ug
 MAX_INITIALIZER_LINES  = 30
 OPTIMIZE_OUTPUT_FOR_C  = NO
 SHOW_USED_FILES        = NO
@@ -69,27 +69,32 @@ WARN_LOGFILE           = log_user
 #---------------------------------------------------------------------------
 # configuration options related to the input files
 #---------------------------------------------------------------------------
-INPUT                  = @builddir@ \
-                        @srcdir@ \
-                        @srcdir@/fakesources \
-                         @srcdir@/../../src/ParaMEDMEM \
-                         @srcdir@/../../src/INTERP_KERNEL \
-                        @srcdir@/../../src/INTERP_KERNEL/Bases \
-                         @srcdir@/../../src/INTERP_KERNEL/Geometric2D \
-                         @srcdir@/../../src/MEDCoupling \
-                        @srcdir@/../../src/MEDLoader \
-                         @srcdir@/../../src/MEDMEM
 
-FILE_PATTERNS          = MEDMEM_GMesh.* \
-                         MEDMEM_Mesh.* \
-                         MEDMEM_Grid.* \
-                         MEDMEM_Meshing.* \
-                         MEDMEM_Support.* \
-                         MEDMEM_Field.* \
-                         MEDMEM_MedFileBrowser.* \
-                         MEDMEM_Remapper.* \
-                         InterpKernelDEC.* \
-                        OverlapDEC.* \
+INPUT                  = @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/intro.dox \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/glossary.dox \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/library.dox \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/medcoupling.dox \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/medloader.dox \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/interptools.dox \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/functionalities.dox \
+                         @CMAKE_CURRENT_BINARY_DIR@/medcouplingexamplesPY.dox \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/gui.dox \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/tools.dox \
+                         @CMAKE_CURRENT_BINARY_DIR@/medcouplingexamplesCPP.dox \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/medcoupling \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/medloader \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/interpolation \
+                         @CMAKE_CURRENT_SOURCE_DIR@/doxfiles/install.dox \
+                         @CMAKE_CURRENT_SOURCE_DIR@/fakesources \
+                         @CMAKE_CURRENT_SOURCE_DIR@/../../src/ParaMEDMEM \
+                         @CMAKE_CURRENT_SOURCE_DIR@/../../src/INTERP_KERNEL \
+                         @CMAKE_CURRENT_SOURCE_DIR@/../../src/INTERP_KERNEL/Bases \
+                         @CMAKE_CURRENT_SOURCE_DIR@/../../src/INTERP_KERNEL/Geometric2D \
+                         @CMAKE_CURRENT_SOURCE_DIR@/../../src/MEDCoupling \
+                         @CMAKE_CURRENT_SOURCE_DIR@/../../src/MEDLoader
+
+FILE_PATTERNS          = InterpKernelDEC.* \
+                         OverlapDEC.* \
                          DEC.* \
                          DisjointDEC.* \
                          MPIProcessorGroup.* \
@@ -97,7 +102,8 @@ FILE_PATTERNS          = MEDMEM_GMesh.* \
                          ExplicitCoincidentDEC.* \
                          NonCoincidentDEC.* \
                          CommInterface.* \
-                        NormalizedUnstructuredMesh.* \
+                         NormalizedGeometricTypes \
+                         NormalizedUnstructuredMesh.* \
                          Interpolation2D.* \
                          Interpolation3D.* \
                          Interpolation3DSurf.* \
@@ -105,7 +111,7 @@ FILE_PATTERNS          = MEDMEM_GMesh.* \
                          PlanarIntersector.* \
                          TargetIntersector.* \
                          Interpolation.* \
-                        InterpolationOptions.* \
+                         InterpolationOptions.* \
                          InterpKernelGeo2DAbstractEdge.* \
                          InterpKernelGeo2DEdge.* \
                          InterpKernelGeo2DEdgeArcCircle.* \
@@ -117,16 +123,17 @@ FILE_PATTERNS          = MEDMEM_GMesh.* \
                          ParaFIELD.* \
                          MEDCouplingMesh.* \
                          MEDCouplingUMesh.* \
-                         MEDCouplingUMeshDesc.* \
+                         MEDCoupling1GTUMesh.* \
                          MEDCouplingPointSet.* \
                          MEDCouplingCMesh.* \
-                        MEDCouplingStructuredMesh.* \
-                        MEDCouplingCurveLinearMesh.* \
+                         MEDCouplingStructuredMesh.* \
+                         MEDCouplingCurveLinearMesh.* \
                          MEDCouplingExtrudedMesh.* \
                          MEDCouplingFieldDouble.* \
                          MEDCouplingField.* \
-                        MEDCouplingNatureOfField.hxx \
-                        MEDCouplingFieldTemplate.* \
+                         MEDCouplingNatureOfFieldEnum \
+                         MEDCouplingNatureOfField.hxx \
+                         MEDCouplingFieldTemplate.* \
                          MEDCouplingFieldDiscretization.* \
                          MEDCouplingTimeDiscretization.* \
                          MEDCouplingTimeLabel.* \
@@ -135,22 +142,19 @@ FILE_PATTERNS          = MEDMEM_GMesh.* \
                          MEDCouplingRemapper.* \
                          MEDLoader.* \
                          MEDFileMesh.* \
-                        MEDFileField.* \
+                         MEDFileField.* \
                          *.dox
-RECURSIVE              = NO
+RECURSIVE              = YES
 EXCLUDE                = CVS
 EXCLUDE_PATTERNS       = *~
-EXAMPLE_PATH           = @srcdir@/../../src/ParaMEDMEM \
-                        @srcdir@/../../src/MEDCoupling/Test \
-                        @srcdir@/../../src/MEDCoupling_Swig \
-                        @srcdir@/../../src/MEDLoader/Swig \
-                         @srcdir@/../../doc/MEDMEM \
-                         @srcdir@/../../src/MEDMEMBinTest \
-                         @srcdir@/../../src/MEDMEM
+EXAMPLE_PATH           = @CMAKE_CURRENT_SOURCE_DIR@/../../src/ParaMEDMEM \
+                         @CMAKE_CURRENT_SOURCE_DIR@/../../src/MEDCoupling/Test \
+                         @CMAKE_CURRENT_SOURCE_DIR@/../../src/MEDCoupling_Swig \
+                         @CMAKE_CURRENT_SOURCE_DIR@/../../src/MEDLoader/Swig
 EXAMPLE_PATTERNS       = *.cxx *.py
 EXAMPLE_RECURSIVE      = NO
-IMAGE_PATH             = @srcdir@/figures
-INPUT_FILTER           = 
+IMAGE_PATH             = @CMAKE_CURRENT_SOURCE_DIR@/figures
+INPUT_FILTER           =
 FILTER_SOURCE_FILES    = NO
 #---------------------------------------------------------------------------
 # configuration options related to source browsing
@@ -164,17 +168,16 @@ REFERENCES_RELATION    = YES
 #---------------------------------------------------------------------------
 ALPHABETICAL_INDEX     = YES
 COLS_IN_ALPHA_INDEX    = 5
-IGNORE_PREFIX          = 
+IGNORE_PREFIX          =
 #---------------------------------------------------------------------------
 # configuration options related to the HTML output
 #---------------------------------------------------------------------------
 GENERATE_HTML          = YES
 HTML_OUTPUT            = html
-HTML_HEADER            = @builddir@/static/header.html
-HTML_FOOTER            = @srcdir@/static/footer.html
-HTML_STYLESHEET        = @srcdir@/static/doxygen.css
-HTML_ALIGN_MEMBERS     = YES
-GENERATE_HTMLHELP      = YES
+HTML_HEADER            = @CMAKE_CURRENT_BINARY_DIR@/static/header.html
+HTML_FOOTER            = @CMAKE_CURRENT_SOURCE_DIR@/static/footer.html
+HTML_EXTRA_STYLESHEET  = @CMAKE_CURRENT_SOURCE_DIR@/static/salome_extra.css
+GENERATE_HTMLHELP      = NO
 GENERATE_CHI           = YES
 BINARY_TOC             = NO
 TOC_EXPAND             = YES
@@ -195,8 +198,8 @@ GENERATE_LATEX         = YES
 LATEX_OUTPUT           = latex
 COMPACT_LATEX          = YES
 PAPER_TYPE             = a4wide
-EXTRA_PACKAGES         = 
-LATEX_HEADER           = 
+EXTRA_PACKAGES         =
+LATEX_HEADER           =
 PDF_HYPERLINKS         = NO
 USE_PDFLATEX           = NO
 LATEX_BATCHMODE        = NO
@@ -207,8 +210,8 @@ GENERATE_RTF           = NO
 RTF_OUTPUT             = rtf
 COMPACT_RTF            = NO
 RTF_HYPERLINKS         = NO
-RTF_STYLESHEET_FILE    = 
-RTF_EXTENSIONS_FILE    = 
+RTF_STYLESHEET_FILE    =
+RTF_EXTENSIONS_FILE    =
 #---------------------------------------------------------------------------
 # configuration options related to the man page output
 #---------------------------------------------------------------------------
@@ -221,26 +224,26 @@ MAN_LINKS              = NO
 #---------------------------------------------------------------------------
 GENERATE_XML           = NO
 #---------------------------------------------------------------------------
-# Configuration options related to the preprocessor   
+# Configuration options related to the preprocessor
 #---------------------------------------------------------------------------
 ENABLE_PREPROCESSING   = YES
 MACRO_EXPANSION        = YES
 EXPAND_ONLY_PREDEF     = YES
 SEARCH_INCLUDES        = YES
-INCLUDE_PATH           = 
-INCLUDE_FILE_PATTERNS  = 
-PREDEFINED             = 
+INCLUDE_PATH           =
+INCLUDE_FILE_PATTERNS  =
+PREDEFINED             =
 EXPAND_AS_DEFINED      = MEDCOUPLING_EXPORT MEDCOUPLINGREMAPPER_EXPORT MEDLOADER_EXPORT
 SKIP_FUNCTION_MACROS   = YES
 #---------------------------------------------------------------------------
-# Configuration::addtions related to external references   
+# Configuration::additions related to external references
 #---------------------------------------------------------------------------
-TAGFILES               = 
-GENERATE_TAGFILE       = 
+TAGFILES               =
+GENERATE_TAGFILE       =
 ALLEXTERNALS           = NO
 PERL_PATH              = /usr/bin/perl
 #---------------------------------------------------------------------------
-# Configuration options related to the dot tool   
+# Configuration options related to the dot tool
 #---------------------------------------------------------------------------
 CLASS_DIAGRAMS         = YES
 HAVE_DOT               = YES
@@ -251,20 +254,12 @@ HIDE_UNDOC_RELATIONS   = YES
 INCLUDE_GRAPH          = YES
 INCLUDED_BY_GRAPH      = YES
 GRAPHICAL_HIERARCHY    = YES
-DOT_PATH               = 
+DOT_PATH               =
 DOT_FONTNAME           = Arial
-DOTFILE_DIRS           = 
-MAX_DOT_GRAPH_WIDTH    = 1024
-MAX_DOT_GRAPH_HEIGHT   = 1024
+DOTFILE_DIRS           =
 GENERATE_LEGEND        = YES
 DOT_CLEANUP            = YES
 #---------------------------------------------------------------------------
-# Configuration::addtions related to the search engine   
+# Configuration::additions related to the search engine
 #---------------------------------------------------------------------------
 SEARCHENGINE           = NO
-CGI_NAME               = search.cgi
-CGI_URL                = 
-DOC_URL                = 
-DOC_ABSPATH            = 
-BIN_ABSPATH            = /usr/local/bin/
-EXT_DOC_PATHS          =