# Project name
project (SOLVERLAB C CXX)
-set (SOLVERLAB_VERSION_MAJOR 0)
-set (SOLVERLAB_VERSION_MINOR 1)
+set (SOLVERLAB_VERSION_MAJOR 9)
+set (SOLVERLAB_VERSION_MINOR 7)
+set (SOLVERLAB_VERSION_SUBMINOR alpha)
option (SOLVERLAB_WITH_DOCUMENTATION "Generate SOLVERLAB documentation" ON)
option (SOLVERLAB_WITH_PYTHON "Compile Python interface of SOLVERLAB" ON)
set (MEDFILE_ROOT_DIR OFF CACHE STRING "MED library path" )
set (MEDCOUPLING_ROOT_DIR OFF CACHE STRING "MEDCoupling library path" )
set (PYTHON_ROOT_DIR OFF CACHE STRING "Python library path" )
+set (PARAVIEW_ROOT_DIR OFF CACHE STRING "PARAVIEW library path" )
#url of tarball librairies
-set (DOWNLOAD_PETSC http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-lite-3.14.0.tar.gz
+set (DOWNLOAD_PETSC http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-lite-3.14.2.tar.gz
CACHE STRING "PETSc tarball path/url" )
-set (DOWNLOAD_SLEPC https://slepc.upv.es/download/distrib/slepc-3.14.0.tar.gz
+set (DOWNLOAD_SLEPC https://slepc.upv.es/download/distrib/slepc-3.14.1.tar.gz
CACHE STRING "SLEPC tarball path/url" )
set (DOWNLOAD_F2CBLASLAPACK https://www.mcs.anl.gov/petsc/mirror/externalpackages/f2cblaslapack-3.4.2.q4.tar.gz
CACHE STRING "F2CBLASLAPACK tarball path/url" )
CACHE STRING "HDF5 tarball path/url" )
set (DOWNLOAD_MED http://files.salome-platform.org/Salome/other/med-4.1.0.tar.gz
CACHE STRING "MED tarball path/url")
-set (DOWNLOAD_MEDCOUPLING http://files.salome-platform.org/Salome/other/medCoupling-9.4.0.tar.gz
+set (DOWNLOAD_MEDCOUPLING http://files.salome-platform.org/Salome/other/medCoupling-9.6.0.tar.gz
CACHE STRING "MEDCoupling tarball path/url" )
+set (DOWNLOAD_OPENMPI https://download.open-mpi.org/release/open-mpi/v3.1/openmpi-3.1.6.tar.gz
+ CACHE STRING "OPENMPI tarball path/url" )
+set (DOWNLOAD_HYPRE https://github.com/hypre-space/hypre/archive/v2.20.0.zip
+ CACHE STRING "HYPRE tarball path/url" )
set (CMAKE_BUILD_TYPE Release CACHE STRING "Installation mode")
+include(ExternalProject)#For PETSc, MED and MEDCoupling
+
list (APPEND CMAKE_MODULE_PATH "${SOLVERLAB_SOURCE_DIR}/cmake_files")
-include(ExternalProject)#For PETSc, MED and MEDCoupling
+if( DEFINED ENV{MPI_HOME} OR DEFINED MPI_HOME )
+ set(SOLVERLAB_WITH_MPI ON)
+ find_package(MPI)
+ if( ${MPI_LIBRARY} STREQUAL "MPI_LIBRARY-NOTFOUND")
+ set ( MPI_LIBRARY ${MPI_HOME}/lib/libmpi.so )
+ endif(${MPI_LIBRARY} STREQUAL "MPI_LIBRARY-NOTFOUND")
+ message ( STATUS "MPI executable is ${MPIEXEC}" )
+else( DEFINED ENV{MPI_HOME} OR DEFINED MPI_HOME )
+ set(SOLVERLAB_WITH_MPI OFF)
+endif( DEFINED ENV{MPI_HOME} OR DEFINED MPI_HOME )
######################################################
# Detection or compilation of PETSc+SLEPc+HDF5 #
petsc_get_version ()
message ( STATUS "PETSc found. Version is ${PETSC_VERSION_MAJOR}.${PETSC_VERSION_MINOR}.${PETSC_VERSION_SUBMINOR}" )
+ message ( STATUS "PETSc compiler is ${PETSC_COMPILER}" )
+ message ( STATUS "PETSc executable is ${PETSC_MPIEXEC}")
+
set(PETSC_INSTALL ${PETSC_DIR})
#Define and search slepc variables
URL ${DOWNLOAD_PETSC}
SOURCE_DIR ${PETSC_DIR}
BUILD_IN_SOURCE TRUE
- CONFIGURE_COMMAND <SOURCE_DIR>/configure --prefix=${PETSC_INSTALL} --with-debugging=0 --with-mpi=0 --download-f2cblaslapack=${DOWNLOAD_F2CBLASLAPACK} --with-fc=0 --download-slepc=${DOWNLOAD_SLEPC} --download-hdf5=${DOWNLOAD_HDF5}
+ CONFIGURE_COMMAND <SOURCE_DIR>/configure --prefix=${PETSC_INSTALL} --with-debugging=0 --download-f2cblaslapack=${DOWNLOAD_F2CBLASLAPACK} --with-fc=0 --download-slepc=${DOWNLOAD_SLEPC} --download-hdf5=${DOWNLOAD_HDF5} --with-mpi=0 # --download-openmpi=${DOWNLOAD_OPENMPI} --download-hypre=${DOWNLOAD_HYPRE}
BUILD_COMMAND make all
TEST_COMMAND make check
INSTALL_COMMAND make install
#define slepc variables
set(SLEPC_DIR ${PETSC_INSTALL})
- set(SLEPC_INCLUDES ${SLEPC_DIR}/include ${PETSC_DIR}/${PETSC_ARCH}/externalpackages/slepc-3.13.4/include ${PETSC_DIR}/${PETSC_ARCH}/externalpackages/slepc-3.13.4/installed-arch-linux2-c-opt/include)
- set(SLEPC_LIBRARIES ${PETSC_DIR}/${PETSC_ARCH}/externalpackages/slepc-3.13.4/installed-arch-linux2-c-opt/lib/libslepc.so)
+ set(SLEPC_INCLUDES ${SLEPC_DIR}/include ${PETSC_DIR}/${PETSC_ARCH}/externalpackages/slepc-3.14.1/include ${PETSC_DIR}/${PETSC_ARCH}/externalpackages/slepc-3.14.1/installed-arch-linux2-c-opt/include)
+ set(SLEPC_LIBRARIES ${PETSC_DIR}/${PETSC_ARCH}/externalpackages/slepc-3.14.1/installed-arch-linux2-c-opt/lib/libslepc.so)
message( STATUS "SLEPc includes ${SLEPC_INCLUDES}")
#define hdf5 variables
set(HDF5_LIBRARY_DIR ${HDF5_ROOT}/lib)
set(HDF5_INCLUDE_DIRS ${HDF5_ROOT}/include)
+ #define MPI variables
+ set(SOLVERLAB_WITH_MPI ON)
+ set(MPI_HOME ${PETSC_INSTALL} )
+ set(MPI_LIBRARY ${PETSC_INSTALL}/lib/libmpi.so)
+ set(MPIEXEC ${PETSC_INSTALL}/bin/mpiexec)
+
endif ( IS_DIRECTORY "/usr/include/petsc/" AND EXISTS "/usr/lib64/libpetsc.so" )
endif ( DEFINED ENV{PETSC_DIR} OR PETSC_DIR )
- if ( ${PETSC_VERSION} VERSION_GREATER 3.5 )
- add_definitions(-DPETSC_VERSION_GREATER_3_5)
- endif( ${PETSC_VERSION} VERSION_GREATER 3.5 )
+if ( ${PETSC_VERSION} VERSION_GREATER 3.5 )
+ add_definitions(-DPETSC_VERSION_GREATER_3_5)
+endif( ${PETSC_VERSION} VERSION_GREATER 3.5 )
string(REPLACE ";" ":" PETSC_INCLUDES_INSTALL "${PETSC_INCLUDES}")# use colon instead of semicolon in environment file env_SOLVERLAB.sh
endif( NOT MEDFILE_ROOT_DIR )
find_package (MEDFile REQUIRED)
- message (STATUS "MEDFile found in ${MEDFILE_ROOT_DIR}")
else( MEDFILE_ROOT_DIR OR DEFINED ENV{MEDFILE_ROOT_DIR})
URL ${DOWNLOAD_MED} #location of med tarball
SOURCE_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/${MED_TARBALL_NAME}
BUILD_IN_SOURCE TRUE
- CONFIGURE_COMMAND <SOURCE_DIR>/configure --prefix=${MEDFILE_ROOT_DIR} --with-hdf5=${HDF5_ROOT} --with-hdf5-include=${HDF5_ROOT}/include --with-hdf5-lib=${HDF5_LIBRARY_DIR} --with-hdf5-bin=${HDF5_ROOT}/bin --with-swig=yes
+ CONFIGURE_COMMAND <SOURCE_DIR>/configure --prefix=${MEDFILE_ROOT_DIR} --with-hdf5=${HDF5_ROOT} --with-hdf5-include=${HDF5_ROOT}/include --with-hdf5-lib=${HDF5_LIBRARY_DIR} --with-hdf5-bin=${HDF5_ROOT}/bin --with-swig=yes --disable-fortran #CC=${PETSC_INSTALL}/bin/mpicc
BUILD_COMMAND make
INSTALL_COMMAND make install
INSTALL_DIR ${MEDFILE_ROOT_DIR}
message (STATUS "MEDCoupling library found in ${MEDCOUPLING_ROOT_DIR}")
endif( NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so OR NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/lib/libmedcoupling.so OR NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/include/MEDCoupling.hxx)
-else( MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR})
+ add_library(medloader SHARED IMPORTED )
+ set_property(TARGET medloader PROPERTY IMPORTED_LOCATION ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so)
+ add_library(interpkernel SHARED IMPORTED )
+ set_property(TARGET interpkernel PROPERTY IMPORTED_LOCATION ${MEDCOUPLING_ROOT_DIR}/lib/libinterpkernel.so)
+ add_library(medcouplingremapper SHARED IMPORTED )
+ set_property(TARGET medcouplingremapper PROPERTY IMPORTED_LOCATION ${MEDCOUPLING_ROOT_DIR}/lib/libmedcouplingremapper.so)
+ add_library(medcouplingcpp SHARED IMPORTED )
+ set_property(TARGET medcouplingcpp PROPERTY IMPORTED_LOCATION ${MEDCOUPLING_ROOT_DIR}/lib/libmedcouplingcpp.so)
+
+ set(MEDCoupling_DIR ${MEDCOUPLING_ROOT_DIR}/cmake_files)
+ find_package(MEDCoupling CONFIG REQUIRED) # CONFIG is important !
+ message( STATUS "MEDCoupling found. Version is ${MEDCoupling_VERSION}")
+
+else( DEFINED MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR})
message(STATUS "MEDCoupling will be downloaded and installed from ${DOWNLOAD_MEDCOUPLING}")
set(MEDCOUPLING_ROOT_DIR ${CMAKE_INSTALL_PREFIX}/share/medcoupling) # Location of the final install
SET(ENV{HDF5_ROOT} ${HDF5_ROOT})#MEDCoupling install process seems to require an environment variable
MATH(EXPR start_tarball_name "${start_tarball_name}+1")#start after the occurence of "/"
MATH(EXPR tarball_name_length "${tarball_url_length}-${start_tarball_name}-7")#name ends before .tar.gz that counts for 7 characters
string(SUBSTRING ${DOWNLOAD_MEDCOUPLING} ${start_tarball_name} ${tarball_name_length} MEDCOUPLING_TARBALL_NAME)
- string(SUBSTRING ${MEDCOUPLING_TARBALL_NAME} 12 ${tarball_name_length} MEDCOUPLING_VERSION_NAME)
+ string(SUBSTRING ${MEDCOUPLING_TARBALL_NAME} 12 ${tarball_name_length} MEDCoupling_VERSION)
- message(STATUS "MEDCoupling version is ${MEDCOUPLING_VERSION_NAME}")
+ message(STATUS "MEDCoupling version will be ${MEDCoupling_VERSION}")
ExternalProject_Add (MEDCoupling
URL ${DOWNLOAD_MEDCOUPLING} #location of medcoupling tarball
SOURCE_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/${MEDCOUPLING_TARBALL_NAME}
-# BUILD_IN_SOURCE FALSE
- CONFIGURE_COMMAND cmake <SOURCE_DIR>/${MEDCOUPLING_TARBALL_NAME} -DCMAKE_INSTALL_PREFIX=${MEDCOUPLING_ROOT_DIR} -DCONFIGURATION_ROOT_DIR=<SOURCE_DIR>/configuration-${MEDCOUPLING_VERSION_NAME} -DMEDFILE_ROOT_DIR=${MEDFILE_ROOT_DIR} -DMEDCOUPLING_ENABLE_PARTITIONER=OFF -DMEDCOUPLING_PARTITIONER_METIS=OFF -DMEDCOUPLING_PARTITIONER_SCOTCH=OFF -DMEDCOUPLING_ENABLE_RENUMBER=OFF -DMEDCOUPLING_BUILD_DOC=OFF -DHDF5_ROOT_DIR=${HDF5_ROOT}
+ BUILD_IN_SOURCE TRUE
+ CONFIGURE_COMMAND cmake <SOURCE_DIR>/${MEDCOUPLING_TARBALL_NAME} -DCMAKE_INSTALL_PREFIX=${MEDCOUPLING_ROOT_DIR} -DCONFIGURATION_ROOT_DIR=<SOURCE_DIR>/configuration-${MEDCoupling_VERSION} -DMEDFILE_ROOT_DIR=${MEDFILE_ROOT_DIR} -DMEDCOUPLING_ENABLE_PARTITIONER=OFF -DMEDCOUPLING_PARTITIONER_METIS=OFF -DMEDCOUPLING_PARTITIONER_SCOTCH=OFF -DMEDCOUPLING_ENABLE_RENUMBER=OFF -DMEDCOUPLING_BUILD_DOC=OFF -DHDF5_ROOT_DIR=${HDF5_ROOT} -DMEDCOUPLING_USE_64BIT_IDS=ON -DMEDCOUPLING_ENABLE_PYTHON=ON#-DSALOME_USE_MPI=ON
BUILD_COMMAND make
INSTALL_COMMAND make install
INSTALL_DIR ${MEDCOUPLING_ROOT_DIR}
LOG_INSTALL TRUE # Wrap install in script to log output
)
+ add_library(medloader SHARED IMPORTED )
+ set_property(TARGET medloader PROPERTY IMPORTED_LOCATION ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so)
+
endif( MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR} )
set(MEDCOUPLING_INCLUDE_DIR ${MEDCOUPLING_ROOT_DIR}/include)
set(MEDCOUPLING_LIBRARIES ${MEDCOUPLING_ROOT_DIR}/lib )#for environment file env_SOLVERLAB.sh
-add_library(medloader SHARED IMPORTED )
-set_property(TARGET medloader PROPERTY IMPORTED_LOCATION ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so)
add_library(medcoupling SHARED IMPORTED )
set_property(TARGET medcoupling PROPERTY IMPORTED_LOCATION ${MEDCOUPLING_ROOT_DIR}/lib/libmedcoupling.so)
+if ( ${MEDCoupling_VERSION} VERSION_GREATER 9.4 )
+ add_definitions(-DMEDCoupling_VERSION_VERSION_GREATER_9_4)
+endif( ${MEDCoupling_VERSION} VERSION_GREATER 9.4 )
+
if (TARGET MED AND TARGET PETSc)
ExternalProject_Add_StepDependencies( MED build PETSc )#PETSc doit être compilé avant MED car c'est PETSc qui compile HDF5
endif(TARGET MED AND TARGET PETSc)
if (TARGET PETSc AND TARGET MEDCoupling)
ExternalProject_Add_StepDependencies( MEDCoupling build PETSc )#PETSc doit être compilé avant MEDCoupling (car il contient hdf5)
endif(TARGET PETSc AND TARGET MEDCoupling)
+
+IF(MEDCOUPLING_USE_64BIT_IDS)
+ SET(CMAKE_SWIG_FLAGS ${CMAKE_SWIG_FLAGS} -DMEDCOUPLING_USE_64BIT_IDS)
+ENDIF(MEDCOUPLING_USE_64BIT_IDS)
####################
# Final operations #
####################
# Paraview variables to choose python version and for env_SOLVERLAB.sh
-if ( DEFINED PARAVIEW_ROOT_DIR OR DEFINED ENV{PARAVIEW_ROOT_DIR})
- if ( DEFINED PARAVIEW_ROOT_DIR )
+if ( PARAVIEW_ROOT_DIR OR DEFINED ENV{PARAVIEW_ROOT_DIR})
+ if ( PARAVIEW_ROOT_DIR )
set( PARAVIEW_INCLUDE_DIR ${PARAVIEW_ROOT_DIR}/include)
set( PARAVIEW_LIBRARIES_DIR ${PARAVIEW_ROOT_DIR}/lib)
- else( DEFINED PARAVIEW_ROOT_DIR )
+ else( PARAVIEW_ROOT_DIR )
set( PARAVIEW_ROOT_DIR $ENV{PARAVIEW_ROOT_DIR} )
set( PARAVIEW_INCLUDE_DIR $ENV{PARAVIEW_ROOT_DIR}/include)
set( PARAVIEW_LIBRARIES_DIR $ENV{PARAVIEW_ROOT_DIR}/lib)
- endif( DEFINED PARAVIEW_ROOT_DIR )
-else( DEFINED PARAVIEW_ROOT_DIR OR DEFINED ENV{PARAVIEW_ROOT_DIR})
+ endif( PARAVIEW_ROOT_DIR )
+else( PARAVIEW_ROOT_DIR OR DEFINED ENV{PARAVIEW_ROOT_DIR})
message(STATUS "PARAVIEW_ROOT_DIR not set. Trying to detect paraview.")
set( PARAVIEW_INCLUDE_DIR /usr/include/paraview/)
set( PARAVIEW_LIBRARIES_DIR /usr/lib/paraview/:/usr/lib64/paraview/:/usr/lib64/vtk/:/usr/lib/vtk/)
-endif( DEFINED PARAVIEW_ROOT_DIR OR DEFINED ENV{PARAVIEW_ROOT_DIR})
+endif( PARAVIEW_ROOT_DIR OR DEFINED ENV{PARAVIEW_ROOT_DIR})
if ( DEFINED PARAVIEW_VERSION OR DEFINED ENV{PARAVIEW_VERSION} )
if ( NOT DEFINED PARAVIEW_VERSION )
ENDIF( ${vtkConfig_file} STREQUAL "vtkConfig_file-NOTFOUND" )
endif( DEFINED PARAVIEW_VERSION OR DEFINED ENV{PARAVIEW_VERSION} )
-
+#Choose python 2 or 3
IF ( ${PARAVIEW_VERSION} STRGREATER "5.6" OR ${PARAVIEW_VERSION} STREQUAL "5.6" )#Use python 3, use VERSION_GREATER_EQUAL if cmake >=3.7
SET(PYTHON2OR3 "3")
message(STATUS "PARAVIEW_VERSION greater than 5.6. We need python3 for postprocessing scripts.")
IF ( PYTHON_ROOT_DIR OR ENV{PYTHON_ROOT_DIR})
IF ( PYTHON_ROOT_DIR )
set(Python_ROOT_DIR ${PYTHON_ROOT_DIR} )
- ELSE( PYTHON_ROOT_DIR })
+ ELSE( PYTHON_ROOT_DIR )
set(Python_ROOT_DIR $ENV{PYTHON_ROOT_DIR} )
- ENDIF( PYTHON_ROOT_DIR })
+ ENDIF( PYTHON_ROOT_DIR)
ENDIF(PYTHON_ROOT_DIR OR ENV{PYTHON_ROOT_DIR})
IF (${CMAKE_VERSION} VERSION_GREATER "3.12.0")
set(Python_VERSION_MINOR ${PYTHON_VERSION_MINOR})
ENDIF(${CMAKE_VERSION} VERSION_GREATER "3.12.0")
-IF ( PYQT5_ROOT_DIR OR ENV{PYQT5_ROOT_DIR})
- IF ( PYQT5_ROOT_DIR )
- set(PYQT5_ROOT_DIR ${PYQT5_ROOT_DIR} )
- ELSE( PYQT5_ROOT_DIR })
+#PyQt5
+IF ( NOT PYQT5_ROOT_DIR )
set(PYQT5_ROOT_DIR $ENV{PYQT5_ROOT_DIR} )
- ENDIF( PYQT5_ROOT_DIR })
-ENDIF(PYQT5_ROOT_DIR OR ENV{PYQT5_ROOT_DIR})
+ENDIF( NOT PYQT5_ROOT_DIR )
#Matplotlib
-IF ( MATPLOTLIB_ROOT_DIR OR ENV{MATPLOTLIB_ROOT_DIR})
- IF ( MATPLOTLIB_ROOT_DIR )
- set(PYQT5_ROOT_DIR ${PYQT5_ROOT_DIR} )
- ELSE( MATPLOTLIB_ROOT_DIR })
+IF ( NOT MATPLOTLIB_ROOT_DIR )
set(MATPLOTLIB_ROOT_DIR $ENV{MATPLOTLIB_ROOT_DIR} )
- ENDIF( MATPLOTLIB_ROOT_DIR })
-ENDIF(MATPLOTLIB_ROOT_DIR OR ENV{MATPLOTLIB_ROOT_DIR})
-
-set(HDF5_ROOT_DIR $ENV{HDF5_ROOT_DIR} )
+ENDIF( NOT MATPLOTLIB_ROOT_DIR )
+
+#HDF5_ROOT_DIR
+IF ( NOT HDF5_ROOT_DIR )
+ IF ( ENV{HDF5_ROOT_DIR} )
+ set(HDF5_ROOT_DIR $ENV{HDF5_ROOT_DIR} )
+ ELSE( ENV{HDF5_ROOT_DIR} )
+ set(HDF5_ROOT_DIR ${HDF5_ROOT} )
+ ENDIF( ENV{HDF5_ROOT_DIR} )
+ENDIF( NOT HDF5_ROOT_DIR )
#Paraview library paths
