set(CMAKE_CXX_STANDARD 11)
set(CMAKE_CXX_STANDARD_REQUIRED ON)
+IF(CMAKE_VERSION VERSION_GREATER_EQUAL 3.18)
+ CMAKE_POLICY(SET CMP0057 NEW)
+ENDIF()
+
# Project name
project (SOLVERLAB C CXX)
set (SOLVERLAB_VERSION_MAJOR 9)
-set (SOLVERLAB_VERSION_MINOR 7)
-set (SOLVERLAB_VERSION_SUBMINOR alpha)
+set (SOLVERLAB_VERSION_MINOR 8)
+set (SOLVERLAB_VERSION_SUBMINOR 0)
option (SOLVERLAB_WITH_DOCUMENTATION "Generate SOLVERLAB documentation" ON)
option (SOLVERLAB_WITH_PYTHON "Generate Python interface of SOLVERLAB using SWIG" ON)
option (SOLVERLAB_WITH_PACKAGE "Generate RPM, Debian and tarball packages" OFF)
option (SOLVERLAB_WITH_COREFLOWS "Generate COREFLOWS module" ON)
option (SOLVERLAB_WITH_TESTS "Generate SOLVERLAB example tests" ON)
+option (SOLVERLAB_WITH_MPI "Generate a parallel version of SOLVERLAB" OFF)
#Path to installed libraries
set (PETSC_DIR OFF CACHE STRING "PETSc library path" )
set (MEDCOUPLING_ROOT_DIR OFF CACHE STRING "MEDCoupling library path" )
set (PYTHON_ROOT_DIR OFF CACHE STRING "Python library path" )
set (PARAVIEW_ROOT_DIR OFF CACHE STRING "PARAVIEW library path" )
+set (MPI4PY_ROOT_DIR OFF CACHE STRING "MPI4PY library path" )
#url of tarball librairies
set (DOWNLOAD_PETSC http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.16.0.tar.gz
CACHE STRING "MEDCoupling tarball path/url" )
set (DOWNLOAD_OPENMPI https://download.open-mpi.org/release/open-mpi/v3.1/openmpi-3.1.6.tar.gz
CACHE STRING "OPENMPI tarball path/url" )
-set (DOWNLOAD_HYPRE https://github.com/hypre-space/hypre/archive/v2.20.0.zip
+set (DOWNLOAD_HYPRE https://github.com/hypre-space/hypre/archive/v2.23.0.zip
CACHE STRING "HYPRE tarball path/url" )
+set (DOWNLOAD_MPI4PY https://bitbucket.org/mpi4py/mpi4py/downloads/mpi4py-3.1.2.tar.gz
+ CACHE STRING "MPY4PY tarball path/url" )
set (CMAKE_BUILD_TYPE Release CACHE STRING "Installation mode")
list (APPEND CMAKE_MODULE_PATH "${SOLVERLAB_SOURCE_DIR}/cmake_files")
-#####################
-# Detection of MPI #
-#####################
+#############################
+# Detection of MPI + MPI4PY #
+#############################
if ( DEFINED ENV{MPI_ROOT_DIR} OR DEFINED MPI_ROOT_DIR )
if ( DEFINED ENV{MPI_ROOT_DIR} )
set(MPI_HOME $ENV{MPI_ROOT_DIR})
endif( DEFINED ENV{MPI_ROOT_DIR} )
endif( DEFINED ENV{MPI_ROOT_DIR} OR DEFINED MPI_ROOT_DIR )
+# Definition of SOLVERLAB_WITH_MPI
if( DEFINED ENV{MPI_HOME} OR MPI_HOME )
set(SOLVERLAB_WITH_MPI ON)
find_package(MPI)
set(SOLVERLAB_WITH_MPI OFF)
endif( DEFINED ENV{MPI_HOME} OR MPI_HOME )
+# Definition of MPI4PY_ROOT_DIR from either the environment or petsc
+if( ${SOLVERLAB_WITH_PYTHON} AND ${SOLVERLAB_WITH_MPI} AND NOT ${MPI4PY_ROOT_DIR})
+ message(STATUS "Defining MPI4PY directory" )
+ if( DEFINED ENV{MPI4PY_ROOT_DIR})
+ set(MPI4PY_ROOT_DIR $ENV{MPI4PY_ROOT_DIR})
+ else( DEFINED ENV{MPI4PY_ROOT_DIR})
+ set(MPI4PY_ROOT_DIR ${PETSC_DIR}/${PETSC_ARCH}/lib/mpi4py)
+ endif( DEFINED ENV{MPI4PY_ROOT_DIR})
+endif(${SOLVERLAB_WITH_PYTHON} AND ${SOLVERLAB_WITH_MPI} AND NOT ${MPI4PY_ROOT_DIR})
+
+if( MPI4PY_ROOT_DIR)
+ message(STATUS "MPI4PY directory is ${MPI4PY_ROOT_DIR}" )
+ SET(CMAKE_SWIG_FLAGS ${CMAKE_SWIG_FLAGS} -DMPI4PY_ROOT_DIR=${MPI4PY_ROOT_DIR})#Necessary for swig generation of mpi structures
+endif( MPI4PY_ROOT_DIR)
+
############################
-# Definition of HDF5_HOME #
+# Definition of HDF5_ROOT #
############################
if ( DEFINED ENV{HDF5_ROOT_DIR} OR DEFINED HDF5_ROOT_DIR )
if ( DEFINED ENV{HDF5_ROOT_DIR} )
URL ${DOWNLOAD_PETSC}
SOURCE_DIR ${PETSC_DIR}
BUILD_IN_SOURCE TRUE
- CONFIGURE_COMMAND <SOURCE_DIR>/configure --prefix=${PETSC_INSTALL} --with-debugging=0 --download-f2cblaslapack=${DOWNLOAD_F2CBLASLAPACK} --with-fc=0 --download-slepc=${DOWNLOAD_SLEPC} --download-hdf5=${DOWNLOAD_HDF5} --with-mpi=0 # --download-openmpi=${DOWNLOAD_OPENMPI} --download-hypre=${DOWNLOAD_HYPRE}
+ CONFIGURE_COMMAND <SOURCE_DIR>/configure --prefix=${PETSC_INSTALL} --with-debugging=0 --download-f2cblaslapack=${DOWNLOAD_F2CBLASLAPACK} --with-mpi=0 --with-fc=0 --download-slepc=${DOWNLOAD_SLEPC} --download-hdf5=${DOWNLOAD_HDF5} --with-petsc4py=yes --download-slepc-configure-arguments="--with-slepc4py=yes" # --download-openmpi=${DOWNLOAD_OPENMPI} --download-hypre=${DOWNLOAD_HYPRE} --download-mpi4py=${DOWNLOAD_MPI4PY}
BUILD_COMMAND make all
TEST_COMMAND make check
INSTALL_COMMAND make install
set(HDF5_LIBRARY_DIR ${HDF5_ROOT}/lib)
set(HDF5_INCLUDE_DIRS ${HDF5_ROOT}/include)
- #define MPI variables
- #set(SOLVERLAB_WITH_MPI ON)
- #set(MPI_HOME ${PETSC_INSTALL} )
- #set(MPI_LIBRARY ${PETSC_INSTALL}/lib/libmpi.so)
- #set(MPIEXEC ${PETSC_INSTALL}/bin/mpiexec)
-
endif ( IS_DIRECTORY "/usr/include/petsc/" AND EXISTS "/usr/lib64/libpetsc.so" )
endif ( DEFINED ENV{PETSC_DIR} OR PETSC_DIR )
add_definitions(-DPETSC_VERSION_GREATER_3_5)
endif( ${PETSC_VERSION} VERSION_GREATER 3.5 )
+if ( ${SOLVERLAB_WITH_PYTHON} )
+ set(SLEPC4PY_ROOT_DIR ${PETSC_DIR}/${PETSC_ARCH}/lib/slepc4py)# or use FindSLEPC4PY
+ set(PETSC4PY_ROOT_DIR ${PETSC_DIR}/${PETSC_ARCH}/lib/petsc4py)# or use FindPETSC4PY
+endif( ${SOLVERLAB_WITH_PYTHON} )
+
string(REPLACE ";" ":" PETSC_INCLUDES_INSTALL "${PETSC_INCLUDES}")# use colon instead of semicolon in environment file env_SOLVERLAB.sh
add_library(petsc SHARED IMPORTED)
find_package(MEDCoupling CONFIG REQUIRED) # CONFIG is important !
message( STATUS "MEDCoupling found. Version is ${MEDCoupling_VERSION}")
-else( DEFINED MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR})
+else( MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR})
message(STATUS "MEDCoupling will be downloaded and installed from ${DOWNLOAD_MEDCOUPLING}")
set(MEDCOUPLING_ROOT_DIR ${CMAKE_INSTALL_PREFIX}/lib/medcoupling) # Location of the final install
SET(ENV{HDF5_ROOT} ${HDF5_ROOT})#MEDCoupling install process seems to require an environment variable
message(STATUS "Python version found is ${Python_VERSION}")
+#Matplotlib root dir
+IF ( NOT DEFINED MATPLOTLIB_ROOT_DIR )
+ set(MATPLOTLIB_ROOT_DIR $ENV{MATPLOTLIB_ROOT_DIR} )
+ENDIF( NOT DEFINED MATPLOTLIB_ROOT_DIR )
+
+#PyQt5 root dir
+IF ( NOT DEFINED PYQT5_ROOT_DIR )
+ set(PYQT5_ROOT_DIR $ENV{PYQT5_ROOT_DIR} )
+ENDIF( NOT DEFINED PYQT5_ROOT_DIR )
+
#Paraview library paths
set (PV_LIB_DIR /usr/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/dist-packages/paraview/:/usr/lib64/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtk/:${MATPLOTLIB_ROOT_DIR}/lib/:${PARAVIEW_LIBRARIES_DIR})
set (PV_PYTHON_DIR /usr/lib/python${Python_VERSION_MAJOR}/dist-packages/:/usr/lib/python${Python_VERSION_MAJOR}/dist-packages/paraview/:/usr/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/dist-packages/paraview/:/usr/lib64/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtk/:/usr/lib64/paraview/site-packages/:/usr/lib64/paraview/site-packages/paraview/:/usr/lib64/paraview/site-packages/vtk/:/usr/lib64/paraview/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/:/usr/lib64/paraview/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/paraview/:/usr/lib64/paraview/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtkmodules:/usr/lib/paraview/site-packages/paraview:/usr/lib/paraview/site-packages/paraview/vtk:${PARAVIEW_ROOT_DIR}/lib/:${PARAVIEW_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/:${PARAVIEW_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages/vtkmodules/:${MATPLOTLIB_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages:${PYQT5_ROOT_DIR}:${PYQT5_ROOT_DIR}/lib/python${Python_VERSION_MAJOR}.${Python_VERSION_MINOR}/site-packages)
endif( ${python-paraview} STREQUAL "/usr/lib/python3/dist-packages/paraview/simple.py" )
endif( ${python-paraview} STREQUAL "python-paraview-NOTFOUND" )
-#PyQt5 root dir
-IF ( NOT DEFINED PYQT5_ROOT_DIR )
- set(PYQT5_ROOT_DIR $ENV{PYQT5_ROOT_DIR} )
-ENDIF( NOT DEFINED PYQT5_ROOT_DIR )
-
-#Matplotlib root dir
-IF ( NOT DEFINED MATPLOTLIB_ROOT_DIR )
- set(MATPLOTLIB_ROOT_DIR $ENV{MATPLOTLIB_ROOT_DIR} )
-ENDIF( NOT DEFINED MATPLOTLIB_ROOT_DIR )
-
-#define HDF5_ROOT_DIR
-IF ( NOT HDF5_ROOT_DIR )
- IF ( ENV{HDF5_ROOT_DIR} )
- set(HDF5_ROOT_DIR $ENV{HDF5_ROOT_DIR} )
- ELSE( ENV{HDF5_ROOT_DIR} )
- set(HDF5_ROOT_DIR ${HDF5_ROOT} )
- ENDIF( ENV{HDF5_ROOT_DIR} )
-ENDIF( NOT HDF5_ROOT_DIR )
-
# Find SWIG
IF ( DEFINED SWIG_ROOT_DIR OR DEFINED ENV{SWIG_ROOT_DIR})
IF ( DEFINED SWIG_ROOT_DIR )
if (NOT DOXYGEN_FOUND)
message (FATAL_ERROR "Doxygen is needed to build the documentation. Please install it correctly.")
endif(NOT DOXYGEN_FOUND)
+
+ configure_file (Doxyfile.in ${PROJECT_BINARY_DIR}/Doxyfile @ONLY IMMEDIATE)
+ add_custom_target (doc COMMAND ${DOXYGEN_EXECUTABLE} ${PROJECT_BINARY_DIR}/Doxyfile SOURCES ${PROJECT_BINARY_DIR}/Doxyfile) #
+ install (DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/doc/html DESTINATION share/doc/solverlab-dev-doc OPTIONAL) #
+
+ if ( SOLVERLAB_WITH_GUI OR COREFLOWS_WITH_GUI )
+ find_package(Sphinx)
+ add_custom_target (docGUI COMMAND ${SPHINX_EXECUTABLE} -M html "${PROJECT_SOURCE_DIR}/CoreFlows/gui/doc" "${PROJECT_BINARY_DIR}/CoreFlows/gui/doc" SOURCES ${PROJECT_SOURCE_DIR}/CoreFlows/gui/doc) #
+ install (DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/Utilities/html DESTINATION share/doc/solverlab-gui-doc OPTIONAL) #
+ endif( SOLVERLAB_WITH_GUI OR COREFLOWS_WITH_GUI )
endif(SOLVERLAB_WITH_DOCUMENTATION)
if (SOLVERLAB_WITH_TESTS) #
ENDIF( DEFINED CPPUNIT_ROOT_DIR)
ENDIF( DEFINED CPPUNIT_ROOT_DIR OR DEFINED ENV{CPPUNIT_ROOT_DIR})
find_package (CPPUNIT REQUIRED)
+
+ add_custom_target (cpp COMMAND ctest -R .exe)# may be replace ctest -R with ctest -L
+ add_custom_target (mpi COMMAND ctest -R Proc)# may be replace ctest -R with ctest -L
endif(SOLVERLAB_WITH_TESTS)
# Enter subdirectories
+set(CDMATH_WITH_POSTPRO ${SOLVERLAB_WITH_POSTPRO} )
+set(CDMATH_WITH_PETSC ${SOLVERLAB_WITH_PETSC} )
+set(CDMATH_WITH_DOCUMENTATION ${SOLVERLAB_WITH_DOCUMENTATION} )
+set(CDMATH_WITH_PYTHON ${SOLVERLAB_WITH_PYTHON} )
+set(CDMATH_WITH_PACKAGE ${SOLVERLAB_WITH_PACKAGE} )
+set(CDMATH_WITH_TESTS ${SOLVERLAB_WITH_TESTS} )
add_subdirectory (CDMATH)
if(SOLVERLAB_WITH_COREFLOWS)
set(COREFLOWS_WITH_DOCUMENTATION ${SOLVERLAB_WITH_DOCUMENTATION} )
