set (CDMATH_VERSION_MAJOR 1)
set (CDMATH_VERSION_MINOR 0)
-include(ExternalProject)#For PETSc, MED and MEDCoupling
-
# Project options
-option (CDMATH_WITH_PETSC "Compile CDMATH with PETSc linking." OFF)
-option (CDMATH_WITH_DOCUMENTATION "Generate documentation with doxygen." OFF)
-option (CDMATH_WITH_PYTHON "Compile Python interface for CDMATH." OFF)
-option (CDMATH_WITH_POSTPRO "Install postprocessing Python modules." OFF)
+option (CDMATH_WITH_PETSC "Compile CDMATH with PETSc linking." ON)
+option (CDMATH_WITH_DOCUMENTATION "Generate documentation with doxygen." ON)
+option (CDMATH_WITH_PYTHON "Compile Python interface for CDMATH." ON)
+option (CDMATH_WITH_POSTPRO "Install postprocessing Python modules." ON)
option (CDMATH_WITH_PACKAGE "Generate RPM, Debian and tarball packages." OFF)
-option (CDMATH_WITH_TESTS "Compile unit testing." OFF)
+option (CDMATH_WITH_TESTS "Compile unit testing." ON)
+
+#Path to installed libraries
set (PETSC_DIR OFF CACHE STRING "PETSc library path" )
-set (HDF5_ROOT OFF CACHE STRING "HDF5 library path" )#For the compilation of MED with a specific version
+set (SLEPC_DIR OFF CACHE STRING "SLEPc library path" )
+set (F2CBLASLAPACK_DIR OFF CACHE STRING "F2CBLASLAPACK library path" )
+set (HDF5_ROOT OFF CACHE STRING "HDF5 library path" )#For the compilation of MED with a specific version of HDF5
set (MEDFILE_ROOT_DIR OFF CACHE STRING "MED library path" )
set (MEDCOUPLING_ROOT_DIR OFF CACHE STRING "MEDCoupling library path" )
-set (DOWNLOAD_MED ${CDMATH_SOURCE_DIR}/pre_requis/med-4.0.0.tar.gz CACHE STRING "MED tarball path/url")
-set (DOWNLOAD_MEDCOUPLING ${CDMATH_SOURCE_DIR}/pre_requis/medCoupling-9.4.0.tar.gz CACHE STRING "MEDCoupling tarball path/url" )
-set (DOWNLOAD_PETSC ${CDMATH_SOURCE_DIR}/pre_requis/PETSc/petsc-lite-3.13.1.tar.gz CACHE STRING "PETSc tarball path/url" )
-set (DOWNLOAD_HDF5 ${CDMATH_SOURCE_DIR}/pre_requis/PETSc/hdf5-1.10.3.tar.gz CACHE STRING "HDF5 tarball path/url" )
-set (DOWNLOAD_SLEPC ${CDMATH_SOURCE_DIR}/pre_requis/PETSc/slepc-3.13.1.tar.gz CACHE STRING "SLEPC tarball path/url" )
+
+#url of tarball librairies
+set (DOWNLOAD_PETSC http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-lite-3.13.tar.gz
+ CACHE STRING "PETSc tarball path/url" )
+set (DOWNLOAD_SLEPC https://slepc.upv.es/download/distrib/slepc-3.13.4.tar.gz
+ CACHE STRING "SLEPC tarball path/url" )
+set (DOWNLOAD_F2CBLASLAPACK ${CDMATH_SOURCE_DIR}/pre_requis/PETSc/f2cblaslapack-3.4.2.q4.tar.gz
+ CACHE STRING "F2CBLASLAPACK tarball path/url" )
+set (DOWNLOAD_HDF5 ${CDMATH_SOURCE_DIR}/pre_requis/PETSc/hdf5-1.10.3.tar.gz
+ CACHE STRING "HDF5 tarball path/url" )
+set (DOWNLOAD_MED http://files.salome-platform.org/Salome/other/med-4.1.0.tar.gz
+ CACHE STRING "MED tarball path/url")
+set (DOWNLOAD_MEDCOUPLING http://files.salome-platform.org/Salome/other/medCoupling-9.4.0.tar.gz
+ CACHE STRING "MEDCoupling tarball path/url" )
# Base directories
set (LINEARSOLVER_DIR ${CDMATH_SOURCE_DIR}/linearsolver)
set (CDMATH_SWIG_DIR ${CDMATH_SOURCE_DIR}/swig)
set (CDMATH_POSTPRO_DIR ${CDMATH_SOURCE_DIR}/postprocessing)
-set (PRE_REQUIS_DIR ${CDMATH_SOURCE_DIR}/pre_requis)
set (TESTS_DIR ${CDMATH_SOURCE_DIR}/tests)
-list (APPEND CMAKE_MODULE_PATH "${CDMATH_SOURCE_DIR}/cmake_files")
-
-# PETSc and HDF5
-if (CDMATH_WITH_PETSC OR PETSC_DIR OR DOWNLOAD_PETSC OR DEFINED ENV{PETSC_DIR} )
- message ( STATUS "Checking variable PETSC_DIR : " $ENV{PETSC_DIR} )
-
- if ( DEFINED ENV{PETSC_DIR} OR PETSC_DIR)
- if(NOT PETSC_DIR)
- set(PETSC_DIR $ENV{PETSC_DIR})
- endif(NOT PETSC_DIR)
-
- find_package (PETSc 3.4 REQUIRED)
- petsc_get_version ()
- string(REPLACE ";" ":" PETSC_INCLUDES_PATH "${PETSC_INCLUDES}")# use colon instead of semicolon in environment file env_CDMATH.sh
- message ( STATUS "PETSC found. Version is ${PETSC_VERSION_MAJOR}.${PETSC_VERSION_MINOR}.${PETSC_VERSION_SUBMINOR}" )
-
- #Define and search slepc variables
- set(SLEPC_DIR ${PETSC_DIR}/${PETSC_ARCH})
- message ( STATUS "Checking variable SLEPC_DIR" )
- if ( IS_DIRECTORY ${SLEPC_DIR}/include AND EXISTS ${SLEPC_DIR}/lib/libslepc.so)
- set(SLEPC_INCLUDES ${SLEPC_DIR}/include)
- set(SLEPC_LIBRARIES ${SLEPC_DIR}/lib/libslepc.so)
- message( STATUS "SLEPC found at ${SLEPC_DIR}" )
- else()
- message( FATAL_ERROR "SLEPC not found at ${SLEPC_DIR}" )
- endif()
-
- #HDF5 to be found in petsc external packages
- if( NOT HDF5_ROOT AND NOT DEFINED ENV{HDF5_ROOT} )#hdf5 is not defined in the environment
- set(HDF5_ROOT $ENV{PETSC_DIR}/$ENV{PETSC_ARCH})# define hint for hdf5/med installation in petsc external packages
- endif( NOT HDF5_ROOT AND NOT DEFINED ENV{HDF5_ROOT} )
-
- else ( DEFINED ENV{PETSC_DIR} OR PETSC_DIR )
- message ( STATUS "PETSC_DIR not set, searching petsc in the system" )
-
- if ( IS_DIRECTORY "/usr/include/petsc/" AND EXISTS "/usr/lib64/libpetsc.so" AND IS_DIRECTORY "/usr/include/slepc/" AND EXISTS "/usr/lib64/libslepc.so" ) #Case fedora/redhat system install
- message ( STATUS "PETSC includes found in /usr/include/petsc/" )
- message ( STATUS "PETSC library found in /usr/lib64" )
- set(PETSC_DIR /usr/)
- set(PETSC_INCLUDES /usr/include/petsc /usr/include/petsc/petsc/mpiuni)
- set(PETSC_LIBRARIES /usr/lib64/libpetsc.so)
-
- #set(PETSC_VERSION "3.8") #3.8 for fedora 26 , 3.9 for fedora 29 , 3.10 for fedora 30, , 3.12 for fedora 32
- petsc_get_version ()
- set (CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, petsc-devel (>= 3.4)") # This is not fully working yet.
-
- message( STATUS "SLEPC includes found in /usr/include/slepc/" )
- message( STATUS "SLEPC library found in /usr/lib64/slepc/" )
- set(SLEPC_DIR /usr/)
- set(SLEPC_INCLUDES ${SLEPC_DIR}/include)
- set(SLEPC_LIBRARIES ${SLEPC_DIR}/lib/libslepc.so)
-
- #HDF5 to be found in the system
- set (CPACK_DEBIAN_PACKAGE_DEPENDS "libhdf5-dev")
- set (CPACK_RPM_PACKAGE_REQUIRES "hdf5-devel")
-
- #elseif ( IS_DIRECTORY "/usr/lib/petsc/" AND EXISTS "/usr/lib/petsc/lib/libpetsc_real.so" AND IS_DIRECTORY "/usr/lib/slepc/" AND EXISTS "/usr/lib/slepc/lib/libslepc_real.so") #Case ubuntu/debian system install
- # message ( STATUS "PETSC found in /usr/lib/petsc/ and exists /usr/lib/petsc/lib/libpetsc_real.so")
- # set(PETSC_DIR /usr/lib/petsc/)
- # set(PETSC_INCLUDES ${PETSC_DIR}/include ${PETSC_DIR}/include/petsc/mpiuni)
- # set(PETSC_LIBRARIES ${PETSC_DIR}/libpetsc_real.so)
-
- # find_package (PETSc 3.4 REQUIRED)
- # petsc_get_version ()
- # set (CPACK_DEBIAN_PACKAGE_DEPENDS "${CPACK_DEBIAN_PACKAGE_DEPENDS}, petsc-dev (>= 3.4)") # This is not fully working yet.
-
- # message ( STATUS "SLEPC found in /usr/lib/slepc/ and exists /usr/lib/slepc/lib/libslepc_real.so")
- # set(SLEPC_DIR /usr/lib/slepc/)
- # set(SLEPC_INCLUDES ${SLEPC_DIR}/include )
- # set(SLEPC_LIBRARIES ${SLEPC_DIR}/libslepc_real.so)
-
- #elseif ( IS_DIRECTORY "/usr/local/lib/python2.7/dist-packages/petsc") #Case ubuntu/debian system pip install
-
- else ( IS_DIRECTORY "/usr/include/petsc/" AND EXISTS "/usr/lib64/libpetsc.so" AND IS_DIRECTORY "/usr/include/slepc/" AND EXISTS "/usr/lib64/libslepc.so" ) # No petsc in system, do compile petsc along with slepc as an external package
- message (STATUS "PETSC not found in the system, PETSC (with SLEPC and HDF5) will be downloaded and compiled" )
- set(PETSC_SRC ${CDMATH_SOURCE_DIR}/pre_requis/PETSc)
- set(PETSC_DIR ${CMAKE_INSTALL_PREFIX}/share/petsc_install) # Location of the final install
- set(PETSC_INCLUDES ${PETSC_DIR}/include/ ${PETSC_DIR}/include/petsc/mpiuni)
- set(PETSC_LIBRARIES ${PETSC_DIR}/lib/libpetsc.so)
-
- ExternalProject_Add (PETSc
- URL ${DOWNLOAD_PETSC}
- SOURCE_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/PETSc
- BUILD_IN_SOURCE TRUE
- CONFIGURE_COMMAND <SOURCE_DIR>/configure --prefix=${PETSC_DIR} --with-debugging=0 --with-mpi=0 --download-f2cblaslapack=${PETSC_SRC}/f2cblaslapack-3.4.2.q4.tar.gz --with-fc=0 --download-slepc=${DOWNLOAD_SLEPC} --download-hdf5=${DOWNLOAD_HDF5}
- BUILD_COMMAND make all
- TEST_COMMAND make check
- INSTALL_COMMAND make install
- INSTALL_DIR ${PETSC_DIR}
- STAMP_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis
- LOG_DOWNLOAD TRUE # Wrap download in script to log output
- LOG_UPDATE TRUE # Wrap update in script to log output
- LOG_CONFIGURE TRUE # Wrap configure in script to log output
- LOG_BUILD TRUE # Wrap build in script to log output
- LOG_TEST TRUE # Wrap test in script to log output
- LOG_INSTALL TRUE # Wrap install in script to log output
- )
-
- petsc_get_version ()
- string(REPLACE ";" ":" PETSC_INCLUDES_PATH "${PETSC_INCLUDES}")# use colon instead of semicolon in environment file env_CDMATH.sh
- message ( STATUS "PETSC found. Version is ${PETSC_VERSION_MAJOR}.${PETSC_VERSION_MINOR}.${PETSC_VERSION_SUBMINOR}" )
-
- #define slepc variables
- set(SLEPC_DIR ${PETSC_DIR}/${PETSC_ARCH})
- set(SLEPC_INCLUDES ${SLEPC_DIR}/include)
- set(SLEPC_LIBRARIES ${SLEPC_DIR}/lib/libslepc.so)
-
- #HDF5 to be found in petsc external packages
- if ( NOT HDF5_ROOT AND NOT DEFINED ENV{HDF5_ROOT} )#hdf5 is not defined in the environment
- set(HDF5_ROOT $ENV{PETSC_DIR}/$ENV{PETSC_ARCH})# define hint for hdf5/med installation in petsc external packages
- endif( NOT HDF5_ROOT AND NOT DEFINED ENV{HDF5_ROOT} )
-
- endif ( IS_DIRECTORY "/usr/include/petsc/" AND EXISTS "/usr/lib64/libpetsc.so" AND IS_DIRECTORY "/usr/include/slepc/" AND EXISTS "/usr/lib64/libslepc.so" )
- endif ( DEFINED ENV{PETSC_DIR} OR PETSC_DIR )
-
- if ( ${PETSC_VERSION} VERSION_GREATER 3.5 )
- add_definitions(-DPETSC_VERSION_GREATER_3_5)
- endif( ${PETSC_VERSION} VERSION_GREATER 3.5 )
-
-endif( CDMATH_WITH_PETSC OR PETSC_DIR OR DOWNLOAD_PETSC OR DEFINED ENV{PETSC_DIR} )
-
-#HDF5
-if ( NOT HDF5_ROOT AND DEFINED ENV{HDF5_ROOT} )#hdf5 is defined in the environment
- set(HDF5_ROOT $ENV{HDF5_ROOT})
-endif( NOT HDF5_ROOT AND DEFINED ENV{HDF5_ROOT} )
-
-#MED
-if( MEDFILE_ROOT_DIR OR DEFINED ENV{MEDFILE_ROOT_DIR})
-
- if ( NOT MEDFILE_ROOT_DIR )
- set(MEDFILE_ROOT_DIR $ENV{MEDFILE_ROOT_DIR} )
- endif( NOT MEDFILE_ROOT_DIR )
-
- message (STATUS "Seeking MEDFile library in ${MEDFILE_ROOT_DIR}")
- find_package (MEDFile REQUIRED)
-else( MEDFILE_ROOT_DIR OR DEFINED ENV{MEDFILE_ROOT_DIR})
- find_package (HDF5 REQUIRED)
- add_library(hdf5 SHARED IMPORTED)
- set_property(TARGET hdf5 PROPERTY IMPORTED_LOCATION ${HDF5_ROOT}/lib/libhdf5.so)
+###Define CDMATH_INCLUDES and CDMATH_LIBRARIES for the compilation of CoreFlows
+set(CDMATH_INCLUDES
+ ${MEDFILE_INCLUDE_DIRS} ${MEDCOUPLING_INCLUDE_DIR}
+ ${BASE_DIR}/inc ${MESH_DIR}/inc ${LINEARSOLVER_DIR}/inc
+ PARENT_SCOPE )
- string(FIND "${HDF5_LIBRARIES}" "libhdf5.so" pos)
- string(SUBSTRING "${HDF5_LIBRARIES}" 0 ${pos} HDF5_LIBRARY_DIR)
-
- set(MACHINE PCLINUX)
- set(MEDFILE_DEFINITIONS "-D${MACHINE} -DMEDFILE_INSTALL_DOC=OFF")#Comment ne pas compiler la doc ?
- set(MEDFILE_ROOT_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/med_install) # Location of the final install
-
- #extraction of the tarball archive name
- string(LENGTH "${DOWNLOAD_MED}" tarball_url_length)#length of the name of the tarball
- string(FIND "${DOWNLOAD_MED}" "/" start_tarball_name REVERSE )# last occurence of "/"
- MATH(EXPR start_tarball_name "${start_tarball_name}+1")#start after the occurence of "/"
- MATH(EXPR tarball_name_length "${tarball_url_length}-${start_tarball_name}-7")#name ends before .tar.gz that counts for 7 characters
- string(SUBSTRING ${DOWNLOAD_MED} ${start_tarball_name} ${tarball_name_length} MED_TARBALL_NAME)
-
- message(STATUS "MED tarball name is ${MED_TARBALL_NAME}")
-
- ExternalProject_Add (MED
- URL ${DOWNLOAD_MED} #location of med tarball
- SOURCE_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/${MED_TARBALL_NAME}
- BUILD_IN_SOURCE TRUE
- CONFIGURE_COMMAND <SOURCE_DIR>/configure --prefix=${MEDFILE_ROOT_DIR} --with-hdf5=${HDF5_ROOT} --with-hdf5-include=${HDF5_ROOT}/include --with-hdf5-lib=${HDF5_LIBRARY_DIR} --with-hdf5-bin=${HDF5_ROOT}/bin --with-swig=yes
- DEPENDS hdf5
- BUILD_COMMAND make
- INSTALL_COMMAND make install
- INSTALL_DIR ${MEDFILE_ROOT_DIR}
- STAMP_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis
- LOG_DOWNLOAD TRUE # Wrap download in script to log output
- LOG_UPDATE TRUE # Wrap update in script to log output
- LOG_CONFIGURE TRUE # Wrap configure in script to log output
- LOG_BUILD TRUE # Wrap build in script to log output
- LOG_TEST TRUE # Wrap test in script to log output
- LOG_INSTALL TRUE # Wrap install in script to log output
- )
-
- set(MEDFILE_INCLUDE_DIRS ${MEDFILE_ROOT_DIR}/include)# Nécessaire pour le medloader et les sous-dossiers mesh, et IJKMesh
- set(MEDFILE_C_LIBRARIES med medC)# Nécessaire pour le medloader
-endif( MEDFILE_ROOT_DIR OR DEFINED ENV{MEDFILE_ROOT_DIR})
-
-#For the environment file
-set(MEDFILE_C_LIBRARIES_PATH ${MEDFILE_ROOT_DIR}/lib/libmed.so ${MEDFILE_ROOT_DIR}/lib/libmedC.so)
-string(REPLACE ";" ":" MEDFILE_C_LIBRARIES_PATH "${MEDFILE_C_LIBRARIES_PATH}")# use colon instead of semicolon in environment file env_CDMATH.sh
-
-add_library(med SHARED IMPORTED)
-set_property(TARGET med PROPERTY IMPORTED_LOCATION ${MEDFILE_ROOT_DIR}/lib/libmed.so)
-add_library(medC SHARED IMPORTED)
-set_property(TARGET medC PROPERTY IMPORTED_LOCATION ${MEDFILE_ROOT_DIR}/lib/libmedC.so)
-
-#MEDCoupling
-if( MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR})
-
- if( NOT MEDCOUPLING_ROOT_DIR )
- set(MEDCOUPLING_ROOT_DIR $ENV{MEDCOUPLING_ROOT_DIR} )
- endif( NOT MEDCOUPLING_ROOT_DIR )
-
- message (STATUS "Seeking MEDCoupling library in ${MEDCOUPLING_ROOT_DIR}")
-
- if( NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so OR NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/lib/libmedcoupling.so OR NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/include/MEDCoupling.hxx)
- message (FATAL_ERROR "MEDCoupling library not found in ${MEDCOUPLING_ROOT_DIR}")
- else( NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so OR NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/lib/libmedcoupling.so OR NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/include/MEDCoupling.hxx)
- message (STATUS "MEDCoupling library found in ${MEDCOUPLING_ROOT_DIR}")
- endif( NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so OR NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/lib/libmedcoupling.so OR NOT EXISTS ${MEDCOUPLING_ROOT_DIR}/include/MEDCoupling.hxx)
-
-else( MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR})
-
- set(MEDCOUPLING_ROOT_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/medCoupling_install) # Location of the final install
-
- #extraction of the tarball archive name
- string(LENGTH ${DOWNLOAD_MEDCOUPLING} tarball_url_length)#length of the tarball
- string(FIND ${DOWNLOAD_MEDCOUPLING} "/" start_tarball_name REVERSE )# last occurence of "/"
- MATH(EXPR start_tarball_name "${start_tarball_name}+1")#start after the occurence of "/"
- MATH(EXPR tarball_name_length "${tarball_url_length}-${start_tarball_name}-7")#name ends before .tar.gz that counts for 7 characters
- string(SUBSTRING ${DOWNLOAD_MEDCOUPLING} ${start_tarball_name} ${tarball_name_length} MEDCOUPLING_TARBALL_NAME)
- string(SUBSTRING ${MEDCOUPLING_TARBALL_NAME} 12 ${tarball_name_length} MEDCOUPLING_VERSION_NAME)
-
- message(STATUS "MEDCOUPLING tarball name is ${MEDCOUPLING_TARBALL_NAME}")
- message(STATUS "MEDCOUPLING version is ${MEDCOUPLING_VERSION_NAME}")
-
- SET(ENV{HDF5_ROOT} ${HDF5_ROOT})#MEDCoupling install process seems to require an environment variable
-
- ExternalProject_Add (MEDCoupling
- URL ${DOWNLOAD_MEDCOUPLING} #location of medcoupling tarball
- SOURCE_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis/${MEDCOUPLING_TARBALL_NAME}
-# BUILD_IN_SOURCE FALSE
- CONFIGURE_COMMAND cmake <SOURCE_DIR>/${MEDCOUPLING_TARBALL_NAME} -DCMAKE_INSTALL_PREFIX=${MEDCOUPLING_ROOT_DIR} -DCONFIGURATION_ROOT_DIR=<SOURCE_DIR>/configuration-${MEDCOUPLING_VERSION_NAME} -DMEDFILE_ROOT_DIR=${MEDFILE_ROOT_DIR} -DMEDCOUPLING_ENABLE_PARTITIONER=OFF -DMEDCOUPLING_PARTITIONER_METIS=OFF -DMEDCOUPLING_PARTITIONER_SCOTCH=OFF -DMEDCOUPLING_ENABLE_RENUMBER=OFF -DMEDCOUPLING_BUILD_DOC=OFF -DHDF5_ROOT_DIR=${HDF5_ROOT}
- DEPENDS med
- BUILD_COMMAND make
- INSTALL_COMMAND make install
- INSTALL_DIR ${MEDCOUPLING_ROOT_DIR}
- STAMP_DIR ${CMAKE_CURRENT_BINARY_DIR}/pre_requis
- LOG_DOWNLOAD TRUE # Wrap download in script to log output
- LOG_UPDATE TRUE # Wrap update in script to log output
- LOG_CONFIGURE TRUE # Wrap configure in script to log output
- LOG_BUILD TRUE # Wrap build in script to log output
- LOG_TEST TRUE # Wrap test in script to log output
- LOG_INSTALL TRUE # Wrap install in script to log output
- )
-endif( MEDCOUPLING_ROOT_DIR OR DEFINED ENV{MEDCOUPLING_ROOT_DIR} )
-
-set(MEDCOUPLING_INCLUDE_DIR ${MEDCOUPLING_ROOT_DIR}/include)
-
-#For the environment file
-set(MEDCOUPLING_LIBRARIES_PATH ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so ${MEDCOUPLING_ROOT_DIR}/lib/libmedcoupling.so)
-string(REPLACE ";" ":" MEDCOUPLING_LIBRARIES_PATH "${MEDCOUPLING_LIBRARIES_PATH}")# use colon instead of semicolon in environment file env_CDMATH.sh
-
-add_library(medloader SHARED IMPORTED )
-set_property(TARGET medloader PROPERTY IMPORTED_LOCATION ${MEDCOUPLING_ROOT_DIR}/lib/libmedloader.so)
-add_library(medcoupling SHARED IMPORTED )
-set_property(TARGET medcoupling PROPERTY IMPORTED_LOCATION ${MEDCOUPLING_ROOT_DIR}/lib/libmedcoupling.so)
-
-if(DEFINED MED AND DEFINED PETSc)
- ExternalProject_Add_StepDependencies( MED build PETSc )#PETSc doit être compilé avant MED car c'est PETSc qui compile HDF5
-endif(DEFINED MED AND DEFINED PETSc)
-
-if(DEFINED MED AND DEFINED MEDCoupling)
- ExternalProject_Add_StepDependencies( MEDCoupling build MED )#MED doit être compilé avant MEDCoupling
-endif(DEFINED MED AND DEFINED MEDCoupling)
+set (CDMATH_LIBRARIES
+ medC medloader medcoupling
+ base mesh linearsolver
+ PARENT_SCOPE )
-# Paraview variables for env_CDMATH.sh
-if (CDMATH_WITH_PYTHON AND CDMATH_WITH_POSTPRO)
- set (PV_LIB_DIR /usr/lib/python2.7/dist-packages/:/usr/lib64/paraview/)
- set (PV_PYTHON_DIR /usr/lib/python2.7/dist-packages:/usr/lib64/paraview/site-packages/:/usr/lib64/paraview/site-packages/paraview/:/usr/lib64/paraview/site-packages/vtk/:/usr/lib64/paraview/python2.7/site-packages/:/usr/lib64/paraview/python2.7/site-packages/paraview/:/usr/lib64/paraview/python2.7/site-packages/vtkmodules:/usr/lib64/paraview/python3.7/site-packages/:/usr/lib64/paraview/python3.7/site-packages/paraview/:/usr/lib64/paraview/python3.7/site-packages/vtkmodules)
-endif ()
-
# Swig interface
-if (CDMATH_WITH_PYTHON)
- find_package (PYTHON REQUIRED)
- find_package (SWIG 3.0 REQUIRED)
- set (CPACK_DEBIAN_PACKAGE_DEPENDS "${CPACK_DEBIAN_PACKAGE_DEPENDS}, python-dev, python-numpy, swig")
- set (CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, python-devel, numpy, swig")
- add_subdirectory (${CDMATH_SWIG_DIR})
-endif ()
+if (CDMATH_WITH_PYTHON)
+ set (CPACK_DEBIAN_PACKAGE_DEPENDS "${CPACK_DEBIAN_PACKAGE_DEPENDS}, python-dev, python-numpy, swig")
+ set (CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, python-devel, numpy, swig")
+ add_subdirectory (${CDMATH_SWIG_DIR})
+endif(CDMATH_WITH_PYTHON)
-find_package (XDR REQUIRED)
add_subdirectory (${BASE_DIR})
add_subdirectory (${MESH_DIR})
-if (CDMATH_WITH_PETSC)
+if (CDMATH_WITH_PETSC)
add_subdirectory (${LINEARSOLVER_DIR})
-endif ()
+endif(CDMATH_WITH_PETSC)
# Documentation
if (CDMATH_WITH_DOCUMENTATION)
- find_package (Doxygen)
- set (CPACK_DEBIAN_PACKAGE_DEPENDS "${CPACK_DEBIAN_PACKAGE_DEPENDS}, doxygen, graphviz, mscgen")
- set (CPACK_RPM_PACKAGE_REQUIRES "${CPACK_RPM_PACKAGE_REQUIRES}, doxygen, graphviz, mscgen")
- if (NOT DOXYGEN_FOUND)
- message (FATAL_ERROR "Doxygen is needed to build the documentation. Please install it correctly.")
- endif (NOT DOXYGEN_FOUND)
configure_file (Doxyfile.in ${PROJECT_BINARY_DIR}/Doxyfile @ONLY IMMEDIATE)
- add_custom_target (doc COMMAND ${DOXYGEN_EXECUTABLE} ${PROJECT_BINARY_DIR}/Doxyfile
+ add_custom_target (docCDMATH COMMAND ${DOXYGEN_EXECUTABLE} ${PROJECT_BINARY_DIR}/Doxyfile
SOURCES ${PROJECT_BINARY_DIR}/Doxyfile)
- if ( IS_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/doc/html)
- install (DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/doc/html DESTINATION share/doc/cdmath)
- endif()
-endif ()
+ if ( IS_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/doc/html)
+ install(DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/doc/html DESTINATION share/doc/cdmath-dev-doc)
+ endif( IS_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/doc/html)
+endif(CDMATH_WITH_DOCUMENTATION)
+
+#Debug option : todo = sort flags
+set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -pg -fprofile-arcs -ftest-coverage -lgcov")
+if (CMAKE_BUILD_TYPE STREQUAL "Debug")
+ SET(CMAKE_EXE_LINKER_FLAGS "-pg -fprofile-arcs -ftest-coverage -lgcov")
+ SET(CMAKE_CXX_FLAGS "-fprofile-arcs -ftest-coverage")
+endif(CMAKE_BUILD_TYPE STREQUAL "Debug")
# Tests
-if (CDMATH_WITH_TESTS)
- set (CMAKE_EXE_LINKER_FLAGS "-pg -fprofile-arcs -ftest-coverage -lgcov")
- enable_testing ()
- find_package (CPPUNIT REQUIRED)
-endif ()
-if (CDMATH_WITH_TESTS AND CDMATH_WITH_PYTHON)
+if (CDMATH_WITH_TESTS)
enable_testing ()
add_subdirectory (${TESTS_DIR})#contains c++ and python tests
-endif()
+endif(CDMATH_WITH_TESTS)
# Packaging
if (CDMATH_WITH_PACKAGE)
- include (CPackLists.txt)
-endif ()
+ include (${CDMATH_SOURCE_DIR}/CPackLists.txt)
+endif(CDMATH_WITH_PACKAGE)
# Postprocessing
if (CDMATH_WITH_PYTHON AND CDMATH_WITH_POSTPRO)
# Configuration file
configure_file(
${PROJECT_SOURCE_DIR}/env_CDMATH.sh
- ${CMAKE_INSTALL_PREFIX}/env_CDMATH.sh
@ONLY
)
