1 // Copyright (C) 2007-2021 CEA/DEN, EDF R&D
3 // This library is free software; you can redistribute it and/or
4 // modify it under the terms of the GNU Lesser General Public
5 // License as published by the Free Software Foundation; either
6 // version 2.1 of the License, or (at your option) any later version.
8 // This library is distributed in the hope that it will be useful,
9 // but WITHOUT ANY WARRANTY; without even the implied warranty of
10 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
11 // Lesser General Public License for more details.
13 // You should have received a copy of the GNU Lesser General Public
14 // License along with this library; if not, write to the Free Software
15 // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
17 // See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
21 // File : tepal2med.cxx
22 // Author : Christian VAN WAMBEKE (CEA)
26 ** prog principal de ghs3dprl
29 #include <stdio.h> /* printf clrscr fopen fread fwrite fclose */
43 #include <QXmlSimpleReader>
44 #include <QXmlInputSource>
45 #include <QApplication>
47 #include "ghs3dprl_msg_parser.h"
48 #include "dlg_ghs3dmain.h"
56 //#include "MEDMEM_Exception.hxx"
57 //#include "MEDMEM_define.hxx"
60 //#include <med_config.h>
61 //#include <med_utils.h>
62 //#include <med_misc.h>
64 //************************************
65 med_idt ouvre_fichier_MED(char *fichier,int verbose)
69 med_int majeur,mineur,release;
71 /* on regarde si le fichier existe */
72 ret = (int) access(fichier,F_OK);
73 if (ret < 0) return fid;
75 /* on regarde s'il s'agit d'un fichier au format HDF5 */
77 ret = MEDfileCompatibility(fichier,&hdfok,&medok);
79 std::cerr<<"File "<<fichier<<" not MED or HDF V5 formatted\n";
83 /* Quelle version de MED est utilise par mdump ? */
84 MEDlibraryNumVersion(&majeur,&mineur,&release);
85 if (verbose>0)fprintf(stdout,"\nReading %s with MED V%d.%d.%d",
86 fichier,(int)majeur,(int)mineur,(int)release);
88 /* Ouverture du fichier MED en lecture seule */
89 fid = MEDfileOpen(fichier,MED_ACC_RDONLY);
90 if (ret < 0) return fid;
92 MEDfileNumVersionRd(fid, &majeur, &mineur, &release);
93 if (( majeur < 2 ) || ( majeur == 2 && mineur < 2 )) {
94 fprintf(stderr,"File %s from MED V%d.%d.%d not assumed\n",
95 fichier,(int)majeur,(int)mineur,(int)release);
96 //" version est ant�ieure �la version 2.2";
97 ret = MEDfileClose(fid);
100 if (verbose>0)fprintf(stdout,", file from MED V%d.%d.%d\n",(int)majeur,(int)mineur,(int)release); }
105 //************************************
106 bool ReadFileMED(QString nomfilemed,ghs3dprl_mesh_wrap *mymailw)
110 med_int i,j,sdim,mdim,nmaa,/*edim,*//*majeur_lu,*//*mineur_lu,*//*release_lu,*//*nprofils,*/nstep;
111 med_mesh_type type_maillage;
112 char dtunit[MED_SNAME_SIZE+1];
113 char axisname[MED_SNAME_SIZE+1];
114 char axisunit[MED_SNAME_SIZE*3+1];
115 med_sorting_type sortingtype;
116 med_axis_type axistype;
123 char* chaine = (char*)malloc((nomfilemed.length()+1)*sizeof(char));
124 strncpy(chaine,nomfilemed.toLatin1().constData(),nomfilemed.length()+1);
125 //std::cout<<"*** ReadFileMED *** "<<chaine<<"\n";
127 fid=ouvre_fichier_MED(chaine,mymailw->verbose);
130 std::cerr<<"Problem opening file "<<nomfilemed.toLatin1().constData()<<"\n";
134 nmaa = MEDnMesh(fid);
136 std::cerr<<"No meshes in "<<nomfilemed.toLatin1().constData()<<"\n";
137 ret = MEDfileClose(fid);
140 if (nmaa > 1) std::cout<<"More than one mesh in "<<nomfilemed.toLatin1().constData()<<", first one taken\n";
141 ret = MEDmeshInfo(fid,numero,mymailw->nommaa,&sdim,&mdim,&type_maillage,mymailw->maillage_description,
142 dtunit,&sortingtype,&nstep,&axistype,axisname,axisunit);
144 std::cerr<<"Problem MEDmeshInfo in "<<nomfilemed.toLatin1().constData()<<"\n";
145 ret = MEDfileClose(fid);
148 //changed with version med: a triangles mesh in 3d is dim 2 now and 3 before 2014
149 if (mdim != 2 && mdim != 3){
150 std::cerr<<"Problem mesh dimension should be 2 or 3: "<<mdim<<"\n";
151 ret = MEDfileClose(fid);
155 std::cerr<<"Problem space dimension should be 3: "<<sdim<<"\n";
156 ret = MEDfileClose(fid);
159 if (type_maillage != MED_UNSTRUCTURED_MESH){
160 std::cerr<<"Problem type mesh should be MED_NON_STRUCTURE: "<<type_maillage<<std::endl;
161 ret = MEDfileClose(fid);
165 //lecture nb de noeuds
166 //cf med-3.0.0_install/share/doc/html/maillage_utilisateur.html
167 med_int nnoe=MEDmeshnEntity(fid,mymailw->nommaa,MED_NO_DT,MED_NO_IT,
168 MED_NODE,MED_NO_GEOTYPE,MED_COORDINATE,MED_NO_CMODE,&chan,&tran);
169 //(med_geometrie_element)0,(med_connectivite)0);
171 std::cerr<<"Problem number of Vertices < 1\n";
172 ret = MEDfileClose(fid);
176 //nombre d'objets MED : mailles, faces, aretes , ...
177 med_int /*nmailles[MED_N_CELL_GEO],*/nbtria3;
178 //med_int nfaces[MED_N_FACE_GEO];
179 med_int /*naretes[MED_N_EDGE_FIXED_GEO],*/nbseg2;
180 //med_int nmailles[MED_NBR_GEOMETRIE_MAILLE],nbtria3;
181 //med_int nfaces[MED_NBR_GEOMETRIE_FACE];
182 //med_int naretes[MED_NBR_GEOMETRIE_ARETE],nbseg2;
183 //polygones et polyedres familles equivalences joints
186 //Combien de mailles, faces ou aretes pour chaque type geometrique ?
187 /*for (i=0;i<MED_NBR_GEOMETRIE_MAILLE;i++){
188 nmailles[i]=MEDnEntMaa(fid,mymailw->nommaa,MED_CONN,MED_MAILLE,typmai[i],typ_con);
189 //lecture_nombre_mailles_standards(fid,nommaa,typmai[i],typ_con,i);
190 if (mymailw->verbose>6) std::cout<<"NumberOf"<<nommai[i]<<"="<<nmailles[i]<<std::endl;
193 nbtria3=MEDmeshnEntity(fid,mymailw->nommaa,MED_NO_DT,MED_NO_IT,
194 MED_CELL,MED_TRIA3,MED_CONNECTIVITY,MED_NODAL,&chan,&tran);
195 nbseg2=MEDmeshnEntity(fid,mymailw->nommaa,MED_NO_DT,MED_NO_IT,
196 MED_CELL,MED_SEG2,MED_CONNECTIVITY,MED_NODAL,&chan,&tran);
198 //combien de familles ?
199 nfam=MEDnFamily(fid,mymailw->nommaa);
200 if (mymailw->verbose>2) {
201 std::cout<<"\nNumberOfFamilies="<<nfam<<std::endl;
202 std::cout<<"NumberOfVertices="<<nnoe<<std::endl;
203 std::cout<<"NumberOfMED_SEG2="<<nbseg2<<std::endl;
204 std::cout<<"NumberOfMED_TRIA3="<<nbtria3<<"\n\n";
207 std::cerr<<"Problem number of MED_TRIA3 < 3, not a skin of a volume\n";
208 ret = MEDfileClose(fid);
212 med_int ifamdelete=0,idelete;
213 std::vector<med_int> famdelete = std::vector<med_int>(nfam);
217 char nomfam[MED_NAME_SIZE+1];
219 //char str1[MED_COMMENT_SIZE+1];
220 char str2[MED_LNAME_SIZE+1];
223 for (i=0;i<nfam;i++) famdelete[i]=0;
224 for (i=0;i<nfam;i++) {
227 ngro = MEDnFamilyGroup(fid,mymailw->nommaa,i+1);
229 std::cerr<<"Problem reading number of groups of family\n";
233 //atributs obsolete MED3
234 //allocation memoire par exces
235 gro = (char*) malloc(MED_LNAME_SIZE*(ngro+1));
237 ret = MEDfamilyInfo(fid,mymailw->nommaa,i+1,nomfam,&numfam,gro);
239 std::cerr<<"Problem reading informations of family\n";
243 if (mymailw->verbose>8) {
244 std::cout<<"Family "<<numfam<<" have "<<ngro<<" groups\n";
245 //affichage des resultats
246 for (j=0;j<ngro;j++) {
247 if (j==0) std::cout<<" Groups :\n";
248 strncpy(str2,gro+j*MED_LNAME_SIZE,MED_LNAME_SIZE);
249 str2[MED_LNAME_SIZE] = '\0';
250 fprintf(stdout," name = %s\n",str2);
252 if (i==nfam-1) std::cout<<std::endl;
255 sfam=sfam.sprintf("%d",(int)numfam);
257 for (j=0;j<ngro;j++){
258 strncpy(str2,gro+j*MED_LNAME_SIZE,MED_LNAME_SIZE);
259 str2[MED_LNAME_SIZE]='\0';
261 if (sgro.contains(mymailw->deletegroups)>0) {
262 //std::cout<<"idelete++ "<<sgro<<std::endl;
267 if (idelete==ngro && ngro>0) { //only delete family whith all delete groups
268 //std::cout<<"famdelete++ "<<numfam<<" "<<ifamdelete<<" "<<ngro<<std::endl;
269 famdelete[ifamdelete]=numfam;
274 for (j=0;j<ngro;j++){
275 strncpy(str2,gro+j*MED_LNAME_SIZE,MED_LNAME_SIZE);
276 str2[MED_LNAME_SIZE]='\0';
278 QRegExp qgroup=QRegExp("Group_Of_All",Qt::CaseSensitive,QRegExp::RegExp);
279 if (sgro.contains(mymailw->deletegroups)==0){
280 if (sgro.contains(qgroup)>0) {
281 sgro="Skin_"+sgro; //pas sur que ce soit pertinent
283 if (mymailw->verbose>8) std::cout<<"families.add("<<sfam.toLatin1().constData()<<
284 ","<<sgro.toLatin1().constData()<<")\n";
285 mymailw->families.add(sfam,sgro);
288 //sgro="Skin_"+sgro; //pas sur que ce soit pertinent
289 //std::cout<<"--deletegroups matches \""<<sfam<<","<<sgro<<"\"\n";
290 if (mymailw->verbose>3) std::cout<<"--deletegroups matches \""<<
291 sgro.toLatin1().constData()<<
292 "\" in family "<<numfam<<std::endl;
297 /*for (j=0;j<ngro;j++){
298 strncpy(str2,gro+j*MED_LNAME_SIZE,MED_LNAME_SIZE);
299 str2[MED_LNAME_SIZE]='\0';
301 //std::cout<<"families.add("<<sfam<<","<<sgro<<")\n";
302 if (sgro.contains(mymailw->deletegroups)==0){
303 //sgro="Skin_"+sgro; //pas sur que ce soit pertinent
304 std::cout<<"families.add("<<sfam<<","<<sgro<<")\n";
305 mymailw->families.add(sfam,sgro);
308 std::cout<<"--deletegroups matches \""<<sgro<<"\"\n";
309 famdelete[ifamdelete]=numfam
314 //on libere la memoire
319 //std::cout<<"famdelete"; for (j=0;j<ifamdelete;j++) std::cout<<" "<<famdelete[j]; std::cout<<std::endl;
321 if (mymailw->verbose>3){
322 std::cout<<"\nFamiliesAndGroupsOf "<<nomfilemed.toLatin1().constData()<<std::endl;
323 mymailw->families.write();
325 /* Allocations memoires */
326 /* table des coordonnees profil : (space dimension * nombre de noeuds ) */
327 med_float *coo=new med_float[nnoe*sdim];
328 /* table des numeros de familles des noeuds profil : (nombre de noeuds) */
329 med_int *famnodesskin=new med_int[nnoe];
330 //med_int *pfltab=new med_int[1]; //inutilise car on lit tout
331 //lecture des noeuds : coordonnees
332 ret=MEDmeshNodeCoordinateRd(fid,mymailw->nommaa,MED_NO_DT,MED_NO_IT,MED_FULL_INTERLACE,coo);
333 //mdim,coo,mode_coo,MED_ALL,pfltab,0,&rep,mymailw->nomcoo,mymailw->unicoo);
335 std::cerr<<"Problem reading nodes\n";
336 ret = MEDfileClose(fid);
339 ret=MEDmeshEntityFamilyNumberRd(fid,mymailw->nommaa,MED_NO_DT,MED_NO_IT,MED_NODE,MED_NONE,famnodesskin);
340 //famnodesskin,nnoe,MED_NOEUD,(med_geometrie_element) 0);
342 std::cerr<<"Problem reading families of nodes\n";
343 ret = MEDfileClose(fid);
346 if (mymailw->verbose>9) {
347 std::cout<<"\nVertices: no x y z family\n";
348 for (i=0;i<nnoe*mdim;i=i+3) {
349 fprintf(stdout,"%5d %13.5e %13.5e %13.5e %5d \n",
350 (int)(i/3+1), coo[i], coo[i+1], coo[i+2], (int)famnodesskin[i/3]);
352 std::cout<<std::endl;
355 med_int *conn2=new med_int[nbseg2*2];
356 ret=MEDmeshElementConnectivityRd(fid,mymailw->nommaa,MED_NO_DT,MED_NO_IT,
357 MED_CELL,MED_SEG2,MED_NODAL,MED_FULL_INTERLACE,conn2);
358 //mdim,conn2,mode_coo,pfltab,0,MED_MAILLE,MED_SEG2,MED_NOD);
360 std::cerr<<"Problem reading MED_SEG2\n";
361 ret = MEDfileClose(fid);
364 med_int *famseg2skin=new med_int[nbseg2];
365 ret=MEDmeshEntityFamilyNumberRd(fid,mymailw->nommaa,MED_NO_DT,MED_NO_IT,MED_CELL,MED_SEG2,famseg2skin);
366 //MEDfamLire(fid,mymailw->nommaa,famseg2skin,nbseg2,MED_MAILLE,MED_SEG2);
368 std::cerr<<"Problem reading families of MED_SEG2\n";
369 ret = MEDfileClose(fid);
372 if (mymailw->verbose>9) {
373 std::cout<<"\nConnectivity MED_SEG2: no node1 node2 family\n";
374 for (i=0;i<nbseg2*2;i=i+2) {
375 fprintf(stdout,"%5d %5d %5d %5d \n",
376 (int)(i/2+1), (int)conn2[i], (int)conn2[i+1], (int)famseg2skin[i/2]);
378 std::cout<<std::endl;
380 //std::cout<<"\ncvw1 conn nbtria3 "<<nbtria3<<"dt "<<MED_NO_DT<<"it "<<MED_NO_IT<<"cell "<<MED_CELL<<"tria3 "<<MED_TRIA3<<std::endl;
381 med_int *conn3=new med_int[nbtria3*3];
382 ret=MEDmeshElementConnectivityRd(fid,mymailw->nommaa,MED_NO_DT,MED_NO_IT,
383 MED_CELL,MED_TRIA3,MED_NODAL,MED_FULL_INTERLACE,conn3);
384 //MEDconnLire(fid,mymailw->nommaa,mdim,conn3,mode_coo,pfltab,0,MED_MAILLE,MED_TRIA3,MED_NOD);
386 std::cerr<<"Problem reading MED_TRIA3\n";
387 ret = MEDfileClose(fid);
390 med_int *famtria3skin=new med_int[nbtria3];
391 ret=MEDmeshEntityFamilyNumberRd(fid,mymailw->nommaa,MED_NO_DT,MED_NO_IT,MED_CELL,MED_TRIA3,famtria3skin);
392 //MEDfamLire(fid,mymailw->nommaa,famtria3skin,nbtria3,MED_MAILLE,MED_TRIA3);
394 std::cerr<<"Problem reading families of MED_TRIA3\n";
395 ret = MEDfileClose(fid);
398 if (mymailw->verbose>9) {
399 std::cout<<"\nConnectivity MED_TRIA3: no node1 node2 node3 family\n";
400 for (i=0;i<nbtria3*3;i=i+3) {
401 fprintf(stdout,"%5d %5d %5d %5d %5d \n",
402 (int)(i/3+1), (int)conn3[i], (int)conn3[i+1], (int)conn3[i+2], (int)famtria3skin[i/3]);
404 std::cout<<std::endl;
407 /*liberation memoire?
414 //std::cout<<"!!!!!!!!nodes "<<famnodesskin[0]<<" "<<nnoe<<famdelete[1]<<std::endl;
415 for (i=0;i<nnoe;i++) {
416 for (j=0;j<ifamdelete;j++) {
417 if (famnodesskin[i]==famdelete[j]) {
418 //std::cout<<"nodes "<<famnodesskin[i]<<" "<<i<<" "<<famdelete[j]<<std::endl;
422 for (i=0;i<nbseg2;i++) {
423 for (j=0;j<ifamdelete;j++) {
424 if (famseg2skin[i]==famdelete[j]) famseg2skin[i]=0;
427 for (i=0;i<nbtria3;i++) {
428 for (j=0;j<ifamdelete;j++) {
429 if (famtria3skin[i]==famdelete[j]) famtria3skin[i]=0;
433 //stocks data for future use
437 montab=new CVWtab(nnoe*mdim,coo);
438 tmp="SKIN_VERTICES_COORDINATES";
439 /*ok=*/mymailw->insert_key(tmp,montab);
441 montab=new CVWtab(nnoe,famnodesskin);
442 tmp="SKIN_VERTICES_FAMILIES";
443 /*ok=*/mymailw->insert_key(tmp,montab);
445 montab=new CVWtab(nbseg2*2,conn2);
446 tmp="SKIN_SEG2_CONNECTIVITIES";
447 /*ok=*/mymailw->insert_key(tmp,montab);
449 montab=new CVWtab(nbtria3,famseg2skin);
450 tmp="SKIN_SEG2_FAMILIES";
451 /*ok=*/mymailw->insert_key(tmp,montab);
453 montab=new CVWtab(nbtria3*3,conn3);
454 tmp="SKIN_TRIA3_CONNECTIVITIES";
455 /*ok=*/mymailw->insert_key(tmp,montab);
457 montab=new CVWtab(nbtria3,famtria3skin);
458 tmp="SKIN_TRIA3_FAMILIES";
459 /*ok=*/mymailw->insert_key(tmp,montab);
461 //if (mymailw->verbose>6) /*ok=*/mymailw->list_keys_mesh_wrap();
463 ret = MEDfileClose(fid);
465 std::cerr<<"Problem closing "<<nomfilemed.toLatin1().constData()<<"\n";
471 //************************************
473 string char2string(char *d, int lg)
476 for (int i=0;i<lg-1;i++){
483 //************************************
485 bool string2int(const string &s, int *v)
486 //string s=argv[1] ; int ii;
487 //ok=string2int(s,&ii);
488 //std::cout<<"test "<<ii<<" "<<ok<<std::endl;
490 string splus=s + " -1"; //evite conversion ok sur "+9truc" qui passe sinon
491 istringstream ss(splus);
493 if (ss >> *v >> v2) return true; else {*v=0 ;return false;}
497 //************************************
499 bool string2float(const string &s, float *v)
501 //ok=string2float(s,&ff);
502 //std::cout<<"test3 "<<ff<<" "<<ok<<std::endl;
504 string splus=s + " -1"; //evite conversion ok sur "+9truc" qui passe sinon
505 istringstream ss(splus);
507 if (ss >> *v >> v2) return true; else {*v=0. ;return false;}
511 //************************************
513 string int2string(const int &v)
521 //************************************
523 string float2string(const float &v)
531 //************************************
532 int main(int argc, char *argv[])
535 int i,nb,nbfiles,limit_swap,nbelem_limit_swap,limit_swap_defaut,verbose;
536 QString path,pathini,casename,casenamemed,fileskinmed,
538 test,menu,launchtepal,background,deletegroups,
539 version="V3.0 (MED3+tepalv1)";
553 for (i = 0; i < argc; i++){
554 if (!strncmp (argv[i], "--help", sizeof ("--help"))) chelp = &(argv[i][0]);
555 else if (!strncmp (argv[i], "--casename=", sizeof ("--casename"))) ccasename = &(argv[i][sizeof ("--casename")]);
556 else if (!strncmp (argv[i], "--number=", sizeof ("--number"))) cnumber = &(argv[i][sizeof ("--number")]);
557 else if (!strncmp (argv[i], "--medname=", sizeof ("--medname"))) cmedname = &(argv[i][sizeof ("--medname")]);
558 else if (!strncmp (argv[i], "--limitswap=", sizeof ("--limitswap"))) climitswap = &(argv[i][sizeof ("--limitswap")]);
559 else if (!strncmp (argv[i], "--verbose=", sizeof ("--verbose"))) cverbose = &(argv[i][sizeof ("--verbose")]);
560 else if (!strncmp (argv[i], "--test=", sizeof ("--test"))) ctest = &(argv[i][sizeof ("--test")]);
561 else if (!strncmp (argv[i], "--menu=", sizeof ("--menu"))) cmenu = &(argv[i][sizeof ("--menu")]);
562 else if (!strncmp (argv[i], "--launchtepal=", sizeof ("--launchtepal"))) claunchtepal = &(argv[i][sizeof ("--launchtepal")]);
563 else if (!strncmp (argv[i], "--background=", sizeof ("--background"))) cbackground = &(argv[i][sizeof ("--background")]);
564 else if (!strncmp (argv[i], "--deletegroups=", sizeof ("--deletegroups"))) cdeletegroups = &(argv[i][sizeof ("--deletegroups")]);
567 if (argc < 2 || chelp){
568 std::cout<<"tepal2med "<<version.toLatin1().constData()<<" Available options:\n"
569 " --help : produces this help message\n"<<
570 " --casename : path and name of input tepal2med files which are\n"<<
571 " - output files of tepal .msg .noboite .faces .points .glo\n"<<
572 " - output file of GHS3DPRL_Plugin casename_skin.med (optional)\n"<<
573 " with initial skin and its initial groups\n"<<
574 " --number : number of partitions\n"<<
575 " --medname : path and name of output MED files\n"<<
576 " --limitswap : max size of working cpu memory (Mo) (before swapping on .temp files)\n"<<
577 " --verbose : trace of execution (0->6)\n"<<
578 " --test : more tests about joints, before generation of output files\n"<<
579 " --menu : a GUI menu for option number\n"<<
580 " --launchtepal : also launch tepal on files casename.faces and casename.points and option number\n"<<
581 " --background : force background mode from launch tepal and generation of final MED files (big meshes)\n"<<
582 " --deletegroups : regular expression (see QRegExp) which matches unwanted groups in final MED files\n"<<
583 " (try --deletegroups=\"(\\bJOINT)\"\n"<<
584 " (try --deletegroups=\"(\\bAll_Nodes|\\bAll_Faces)\"\n"<<
585 " (try --deletegroups=\"((\\bAll_|\\bNew_)(N|F|T))\"\n";
586 std::cout<<"example:\n tepal2med --casename=/tmp/GHS3DPRL --number=2 --medname=DOMAIN "<<
587 "--limitswap=1000 --verbose=0 --test=yes --menu=no --launchtepal=no\n\n";
588 return 1; //no output files
592 std::cerr<<"--casename: a path/name is expected\n\n";
597 std::cerr<<"--number: an integer is expected\n\n";
601 nbfiles=tmp.toLong(&ok,10);
603 std::cerr<<"--number: an integer is expected\n\n";
607 std::cerr<<"--number: a positive integer is expected\n\n";
610 if (nbfiles>2048){ //delirium in 2008
611 std::cerr<<"--number: a positive integer <= 2048 is expected\n\n";
614 if (!cmedname) cmedname=ccasename;
615 casenamemed=cmedname;
616 limit_swap_defaut=1000; //1000Mo
617 limit_swap=limit_swap_defaut;
620 limit_swap=tmp.toLong(&ok,10);
622 std::cerr<<"--limitswap: an integer is expected. try 1000\n\n";
625 if (limit_swap<1 || limit_swap>32000){
626 std::cerr<<"--limitswap: [1->32000] expected. try 1000\n\n";
630 //default 1GOctet/8(for float)
631 nbelem_limit_swap=limit_swap*1000000; //100%
632 CVWtab::memorymax=nbelem_limit_swap;
637 verbose=tmp.toLong(&ok,10);
639 std::cerr<<"--verbose: an integer is expected\n\n";
643 std::cerr<<"--verbose: a positive integer is expected\n\n";
651 if (tmp=="yes") test="yes";
657 if (tmp=="yes") menu="yes";
660 launchtepal="no"; //default
663 if (tmp=="yes") launchtepal="yes";
666 background="no"; //default
669 if (tmp=="yes") background="yes";
673 // We must always have an application
675 QApplication a(argc,argv);
676 dlg_ghs3dmain *m = new dlg_ghs3dmain();
677 m->setWindowTitle("tepal2med 3.0");
680 if ( m->result() == QDialog::Accepted ) {
681 std::cout<<"parameters "<<m->KeepFiles()<<" "<<m->NbPart()<<std::endl;
690 int n=casenamemed.count('/');
692 path=casenamemed.section('/',-n-1,-2)+"/";
695 casenamemed=casenamemed.section('/',-1);
696 if (casenamemed.length()>20){
697 std::cerr<<"--medname truncated (no more 20 characters)"<<std::endl;
698 casenamemed.truncate(20);
701 n=casename.count('/');
703 pathini=casename.section('/',-n-1,-2)+"/";
706 casename=casename.section('/',-1);
707 if (casename.length()>20){
708 std::cerr<<"--casename truncated (no more 20 characters)"<<std::endl;
709 casename.truncate(20);
712 /*std::cout<<"CaseNameMed="<<casenamemed<<std::endl;
713 std::cout<<"PathMed="<<path<<std::endl;*/
715 deletegroups="(\\bxyz)"; //default improbable name
717 deletegroups=cdeletegroups;
722 std::cout<<"tepal2med "<<version.toLatin1().constData()<<" parameters:"<<
723 "\n --casename="<<pathini.toLatin1().constData()<<casename.toLatin1().constData()<<
724 "\n --number="<<nbfiles<<
725 "\n --medname="<<path.toLatin1().constData()<<casenamemed.toLatin1().constData()<<
726 "\n --limitswap="<<limit_swap<<
727 "\n --verbose="<<verbose<<
728 "\n --test="<<test.toLatin1().constData()<<
729 "\n --menu="<<menu.toLatin1().constData()<<
730 "\n --launchtepal="<<launchtepal.toLatin1().constData()<<
731 "\n --background="<<background.toLatin1().constData()<<
732 "\n --deletegroups=\""<<deletegroups.toLatin1().constData()<<"\"\n";
734 //utile si appel par plugin ghs3dprl sur big meshes et tepal sur plusieurs jours
736 if (background=="yes"){
740 exit(0); //temporary ok for plugin
743 //On rend le fils independant de tout terminal
744 //from here everything in background: tepal AND generation of final MED files
746 system("sleep 10"); //for debug
749 printf("background mode is not supported on win32 platform !\n");
752 //"tepal -f exemple1 -n 4"
753 if (launchtepal=="yes"){
754 //tepal64.exe -f /home/wambeke/tmp/GHS3DPRL -n 5 --tetmesh_args "-c 0"
755 //cmd="tepal --tetmesh_args \"-c 0\" -f "+pathini+casename+" -n "+cmd.sprintf("%d",nbfiles)+" > "+path+"tepal.log";
756 cmd="tepal -f "+pathini+casename+" -n "+cmd.sprintf("%d",nbfiles)+" > "+path+"tepal.log";
757 std::cout<<"\nlaunchtepal command: background="<<cbackground<<
758 "\n "<<cmd.toLatin1().constData()<<std::endl;
759 system(cmd.toLatin1().constData()); // run
760 //sometimes it is better to wait flushing files on slow filesystem...
763 ghs3dprl_mesh_wrap *mymailw=new ghs3dprl_mesh_wrap;
764 //no constructor, later maybe
766 mymailw->nbfilestot=nbfiles;
767 //for huge cases big array swap in huge binary files
768 mymailw->nbelem_limit_swap=nbelem_limit_swap;
769 mymailw->verbose=verbose;
770 mymailw->casename=casename;
771 mymailw->medname=casenamemed;
773 mymailw->pathini=pathini;
774 mymailw->deletegroups=QRegExp(deletegroups,Qt::CaseSensitive,QRegExp::RegExp);
775 ghs3dprl_msg_parser handler;
776 //constructor later maybe
777 //handler.verbose=true;
778 handler.mailw=mymailw;
779 mymailw->families.no=1;
780 //std::cout<<"coucou1 "<<mymailw->families.no<<std::endl;
781 //mymailw->families.add(casename,casenamemed);
782 format=format.sprintf("%d",nbfiles);
783 int nbf=format.length();
784 format=format.sprintf(".%%.%dd.%%.%dd",nbf,nbf);
785 mymailw->format=format;
786 mymailw->format_tetra=format; //here is tepal: not used
787 mymailw->for_tetrahpc=false; //to know what files to read: .noboite or .mesh
789 //something like "/home/wambeke/tmp/GHS3DPRL_skin.med"
790 fileskinmed=pathini+casename+"_skin.med";
791 //fileskinmed="/home/wambeke/tmp/GHS3DPRL_skin.med";
794 char ctmp[fileskinmed.length()+1] ; strcpy(ctmp,fileskinmed);
795 int res=dumpMED(&ctmp[0],1);
797 int ret = access(fileskinmed.toLatin1().constData(),F_OK); //on regarde si le fichier existe
799 ok=ReadFileMED(fileskinmed,mymailw); }
801 if (verbose>0)std::cout<<"Initial skin file <"<<fileskinmed.toLatin1().constData()<<"> does not exist\n"; }
804 //if test read all files before (only small files)
806 if (verbose>0) std::cout<<"\nReading output files of tepal as input files of tepal2med...\n";
809 //supposed big files big arrays so don't read with parser
811 for (int i=1; i<=nbfiles; i++){
813 tmp=pathini+casename+tmp.sprintf(format.toLatin1().constData(),nbfiles,i)+".msg";
814 if (verbose>0) std::cout<<"FileName="<<tmp.toLatin1().constData()<<std::endl;
815 ok=mymailw->ReadFileMSGnew(tmp);
818 std::cout<<"NumberOfFilesMSGacquired="<<mymailw->nbfiles<<"\n\n";
819 if (mymailw->nbfiles != nbfiles){
820 std::cerr<<"NumberOfFiles != NumberOfFilesAcquired is unexpected\n\n";
824 /*old version with xml parser too slow
825 QXmlSimpleReader reader;
826 reader.setContentHandler(&handler);
828 for (int i=1; i<=nbfiles; i++)
831 //tmp=casename+tmp.sprintf(".%d.%d.msg",nbfiles,i);
832 tmp=pathini+casename+tmp.sprintf(format,nbfiles,i)+".msg";
833 if (verbose>0) std::cout<<"FileName="<<tmp<<std::endl;
835 QXmlInputSource source(&File);
836 reader.parse(source);
840 std::cout<<"NumberOfFilesMSGAcquired="<<mymailw->nbfiles<<"\n";
841 if (mymailw->nbfiles != nbfiles){
842 std::cerr<<"Problem NumberOfFiles != NumberOfFilesAcquired\n";
847 ok=mymailw->test_msg_wrap();
849 if (verbose>0) std::cout<<"\nResult_test_msg_wrap=ok\n\n";
852 std::cerr<<"\nResult_test_msg_wrap=NO_OK!\n\n";
858 //after verification remove unusued data
859 //"NE0 FI" for/from <version>1.0</version>
860 //after verification remove duplicates data
861 //for debug but don't do that because reliability
862 // and locality of datas files
863 //" RE " for duplicates <receive>
864 //int nb=mymailw->remove_key_mesh_wrap(QRegExp("( NE0 | RE)",true,false));
866 //because <send> equals <receive>
868 nb=mymailw->remove_key_mesh_wrap(QRegExp("RE",Qt::CaseSensitive,QRegExp::RegExp));
869 if (verbose>3) std::cout<<"NumberOfKeysRemoved="<<nb<<std::endl;
870 if (verbose>3) ok=mymailw->list_keys_mesh_wrap();
872 //test read files .noboiteb
873 //tmp=casename+".noboiteb";
874 //ok=mymailw->ReadFileNOBOITEB(tmp);
876 //read files .noboite
879 for (int i=1; i<=nbfiles; i++){
881 tmp=pathini+casename+tmp.sprintf(format.toLatin1().constData(),nbfiles,i)+".noboite";
882 if (verbose>0) std::cout<<"FileName="<<tmp.toLatin1().constData()<<std::endl;
883 ok=mymailw->ReadFileNOBOITE(tmp);
886 std::cout<<"NumberOfFilesNOBOITEAcquired="<<mymailw->nbfiles<<"\n";
887 if (mymailw->nbfiles != nbfiles){
888 std::cerr<<"NumberOfFiles != NumberOfFilesAcquired is unexpected\n";
893 ok=mymailw->test_vertices_wrap();
895 if (verbose>0) std::cout<<"\nResult_test_vertices_wrap=ok\n\n";
898 std::cerr<<"\nResult_test_vertices_wrap=NO_OK!\n\n";
905 for (int i=1; i<=nbfiles; i++){
907 tmp=pathini+casename+tmp.sprintf(format.toLatin1().constData(),nbfiles,i)+".faces";
908 if (verbose>0) std::cout<<"FileName="<<tmp.toLatin1().constData()<<std::endl;
909 ok=mymailw->ReadFileFACES(tmp);
912 std::cout<<"NumberOfFilesFACESAcquired="<<mymailw->nbfiles<<"\n\n";
913 if (mymailw->nbfiles != nbfiles){
914 std::cerr<<"NumberOfFiles != NumberOfFilesAcquired is unexpected\n\n";
921 for (int i=1; i<=nbfiles; i++){
923 tmp=pathini+casename+tmp.sprintf(format.toLatin1().constData(),nbfiles,i)+".points";
924 if (verbose>0) std::cout<<"FileName="<<tmp.toLatin1().constData()<<std::endl;
925 ok=mymailw->ReadFilePOINTS(tmp);
928 std::cout<<"NumberOfFilesPOINTSAcquired="<<mymailw->nbfiles<<"\n\n";
929 if (mymailw->nbfiles != nbfiles)
931 std::cerr<<"NumberOfFiles != NumberOfFilesAcquired is unexpected\n\n";
937 //supposed big files big arrays so don't read with parser
939 for (int i=1; i<=nbfiles; i++){
941 tmp=pathini+casename+tmp.sprintf(format.toLatin1().constData(),nbfiles,i)+".glo";
942 if (verbose>0) std::cout<<"FileName="<<tmp.toLatin1().constData()<<std::endl;
943 ok=mymailw->ReadFileGLO(tmp);
944 //mymailw->SwapOutOfMemory_key_mesh_wrap(QRegExp("GL",true,false));
947 std::cout<<"NumberOfFilesGLOAcquired="<<mymailw->nbfiles<<"\n\n";
948 if (mymailw->nbfiles != nbfiles){
949 std::cerr<<"NumberOfFiles != NumberOfFilesAcquired is unexpected\n\n";
954 ok=mymailw->list_keys_mesh_wrap();
956 ok=mymailw->list_onekey_mesh_wrap(tmp);
958 ok=mymailw->list_onekey_mesh_wrap(tmp);
960 ok=mymailw->list_onekey_mesh_wrap(tmp);
962 ok=mymailw->list_onekey_mesh_wrap(tmp);
965 ok=mymailw->list_onekey_mesh_wrap(tmp);*/
967 //test remove points (type 3)
968 //nb=mymailw->remove_key_mesh_wrap(QRegExp("PO",true,false));
969 //std::cout<<"***remove_key_mesh_wrap*** remove nb="<<nb<<std::endl;
970 //ok=mymailw->list_keys_mesh_wrap();
972 ok=mymailw->Find_VerticesDomainToVerticesSkin();
975 ok=mymailw->Write_MEDfiles_v2(true); //deletekeys=true
977 nb=mymailw->remove_all_keys_mesh_wrap();
978 if (verbose>3)std::cout<<"***remove_all_key_mesh_wrap*** "<<nb<<" keys removed\n";
979 if (verbose>0)std::cout<<std::endl<<"===end of "<<argv[0]<<"==="<<std::endl;
982 //int res=dumpMED("/home/wambeke/tmp/DOMAIN_1.med",1);