1 // Copyright (C) 2007-2023 CEA, EDF
3 // This library is free software; you can redistribute it and/or
4 // modify it under the terms of the GNU Lesser General Public
5 // License as published by the Free Software Foundation; either
6 // version 2.1 of the License, or (at your option) any later version.
8 // This library is distributed in the hope that it will be useful,
9 // but WITHOUT ANY WARRANTY; without even the implied warranty of
10 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
11 // Lesser General Public License for more details.
13 // You should have received a copy of the GNU Lesser General Public
14 // License along with this library; if not, write to the Free Software
15 // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
17 // See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
19 // Author : Anthony Geay (CEA/DEN)
21 #include "MEDCouplingPointSet.hxx"
23 #include "MEDCoupling1GTUMesh.hxx"
24 #include "MEDCouplingUMesh.hxx"
25 #include "MEDCouplingMemArray.hxx"
26 #include "PlanarIntersector.txx"
27 #include "InterpKernelGeo2DQuadraticPolygon.hxx"
28 #include "InterpKernelGeo2DNode.hxx"
29 #include "DirectedBoundingBox.hxx"
30 #include "InterpKernelAutoPtr.hxx"
37 using namespace MEDCoupling;
39 MEDCouplingPointSet::MEDCouplingPointSet():_coords(0)
43 MEDCouplingPointSet::MEDCouplingPointSet(const MEDCouplingPointSet& other, bool deepCpy):MEDCouplingMesh(other),_coords(0)
46 _coords=other._coords->performCopyOrIncrRef(deepCpy);
49 MEDCouplingPointSet::~MEDCouplingPointSet()
55 mcIdType MEDCouplingPointSet::getNumberOfNodes() const
58 return _coords->getNumberOfTuples();
60 throw INTERP_KERNEL::Exception("Unable to get number of nodes because no coordinates specified !");
63 int MEDCouplingPointSet::getSpaceDimension() const
66 return (int)_coords->getNumberOfComponents();
68 throw INTERP_KERNEL::Exception("Unable to get space dimension because no coordinates specified !");
71 void MEDCouplingPointSet::updateTime() const
75 updateTimeWith(*_coords);
79 std::size_t MEDCouplingPointSet::getHeapMemorySizeWithoutChildren() const
81 return MEDCouplingMesh::getHeapMemorySizeWithoutChildren();
84 std::vector<const BigMemoryObject *> MEDCouplingPointSet::getDirectChildrenWithNull() const
86 std::vector<const BigMemoryObject *> ret;
87 ret.push_back(_coords);
91 void MEDCouplingPointSet::setCoords(const DataArrayDouble *coords)
93 if( coords != _coords )
97 _coords=const_cast<DataArrayDouble *>(coords);
105 * Returns a pointer to the array of point coordinates held by \a this.
106 * \return DataArrayDouble * - the pointer to the array of point coordinates. The
107 * caller is to delete this array using decrRef() as it is no more needed.
109 DataArrayDouble *MEDCouplingPointSet::getCoordinatesAndOwner() const
117 * Copies string attributes from an \a other mesh. The copied strings are
121 * - textual data of the coordinates array (name and components info)
123 * \param [in] other - the mesh to copy string attributes from.
125 void MEDCouplingPointSet::copyTinyStringsFrom(const MEDCouplingMesh *other)
127 MEDCouplingMesh::copyTinyStringsFrom(other);
128 const MEDCouplingPointSet *otherC=dynamic_cast<const MEDCouplingPointSet *>(other);
130 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::copyTinyStringsFrom : meshes have not same type !");
131 if(_coords && otherC->_coords)
132 _coords->copyStringInfoFrom(*otherC->_coords);
135 bool MEDCouplingPointSet::isEqualIfNotWhy(const MEDCouplingMesh *other, double prec, std::string& reason) const
138 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::isEqualIfNotWhy : null mesh instance in input !");
139 const MEDCouplingPointSet *otherC=dynamic_cast<const MEDCouplingPointSet *>(other);
142 reason="mesh given in input is not castable in MEDCouplingPointSet !";
145 if(!MEDCouplingMesh::isEqualIfNotWhy(other,prec,reason))
147 if(!areCoordsEqualIfNotWhy(*otherC,prec,reason))
153 * Checks equality of point coordinates with coordinates of an \a other mesh.
154 * None textual data is considered.
155 * \param [in] other - the mesh to compare coordinates with \a this one.
156 * \param [in] prec - precision value to compare coordinates.
157 * \return bool - \a true if coordinates of points are equal, \a false else.
159 bool MEDCouplingPointSet::isEqualWithoutConsideringStr(const MEDCouplingMesh *other, double prec) const
161 const MEDCouplingPointSet *otherC=dynamic_cast<const MEDCouplingPointSet *>(other);
164 if(!areCoordsEqualWithoutConsideringStr(*otherC,prec))
169 bool MEDCouplingPointSet::areCoordsEqualIfNotWhy(const MEDCouplingPointSet& other, double prec, std::string& reason) const
171 if(_coords==0 && other._coords==0)
173 if(_coords==0 || other._coords==0)
175 reason="Only one PointSet between the two this and other has coordinate defined !";
178 if(_coords==other._coords)
180 bool ret=_coords->isEqualIfNotWhy(*other._coords,prec,reason);
182 reason.insert(0,"Coordinates DataArray do not match : ");
187 * Checks equality of point coordinates with \a other point coordinates.
188 * Textual data (name and components info) \b is compared as well.
189 * \param [in] other - the point coordinates to compare with \a this one.
190 * \param [in] prec - precision value to compare coordinates.
191 * \return bool - \a true if coordinates of points are equal, \a false else.
193 bool MEDCouplingPointSet::areCoordsEqual(const MEDCouplingPointSet& other, double prec) const
196 return areCoordsEqualIfNotWhy(other,prec,tmp);
200 * Checks equality of point coordinates with \a other point coordinates.
201 * None textual data is considered.
202 * \param [in] other - the point coordinates to compare with \a this one.
203 * \param [in] prec - precision value to compare coordinates.
204 * \return bool - \a true if coordinates of points are equal, \a false else.
206 bool MEDCouplingPointSet::areCoordsEqualWithoutConsideringStr(const MEDCouplingPointSet& other, double prec) const
208 if(_coords==0 && other._coords==0)
210 if(_coords==0 || other._coords==0)
212 if(_coords==other._coords)
214 return _coords->isEqualWithoutConsideringStr(*other._coords,prec);
218 * Returns coordinates of \a nodeId-th node.
219 * \param [in] nodeId - the ID of the node of interest.
220 * \param [in,out] coo - the array filled with coordinates of the \a nodeId-th
221 * node. This array is not cleared before filling in, the coordinates are
222 * appended to its end.
223 * \throw If the coordinates array is not set.
224 * \throw If \a nodeId is not a valid index for the coordinates array.
226 * \if ENABLE_EXAMPLES
227 * \ref cpp_mcpointset_getcoordinatesofnode "Here is a C++ example".<br>
228 * \ref py_mcpointset_getcoordinatesofnode "Here is a Python example".
231 void MEDCouplingPointSet::getCoordinatesOfNode(mcIdType nodeId, std::vector<double>& coo) const
234 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::getCoordinatesOfNode : no coordinates array set !");
235 mcIdType nbNodes=getNumberOfNodes();
236 if(nodeId>=0 && nodeId<nbNodes)
238 const double *cooPtr=_coords->getConstPointer();
239 std::size_t spaceDim=getSpaceDimension();
240 coo.insert(coo.end(),cooPtr+spaceDim*nodeId,cooPtr+spaceDim*(nodeId+1));
244 std::ostringstream oss; oss << "MEDCouplingPointSet::getCoordinatesOfNode : request of nodeId \"" << nodeId << "\" but it should be in [0,"<< nbNodes << ") !";
245 throw INTERP_KERNEL::Exception(oss.str().c_str());
250 * Finds nodes equal within \a precision and returns an array describing the
251 * permutation to remove duplicated nodes.
252 * \param [in] precision - minimal absolute distance between two nodes at which they are
253 * considered not coincident.
254 * \param [in] limitNodeId - limit node id. If all nodes within a group of coincident
255 * nodes have id strictly lower than \a limitTupleId then they are not
256 * returned. Put -1 to this parameter to have all nodes returned.
257 * \param [out] areNodesMerged - is set to \a true if any coincident nodes found.
258 * \param [out] newNbOfNodes - returns number of unique nodes.
259 * \return DataArrayIdType * - the permutation array in "Old to New" mode. For more
260 * info on "Old to New" mode see \ref numbering. The caller
261 * is to delete this array using decrRef() as it is no more needed.
262 * \throw If the coordinates array is not set.
264 DataArrayIdType *MEDCouplingPointSet::buildPermArrayForMergeNode(double precision, mcIdType limitNodeId, bool& areNodesMerged, mcIdType& newNbOfNodes) const
266 DataArrayIdType *comm,*commI;
267 findCommonNodes(precision,limitNodeId,comm,commI);
268 mcIdType oldNbOfNodes=getNumberOfNodes();
269 MCAuto<DataArrayIdType> ret=buildNewNumberingFromCommonNodesFormat(comm,commI,newNbOfNodes);
270 areNodesMerged=(oldNbOfNodes!=newNbOfNodes);
277 * Finds nodes coincident within \a prec tolerance.
278 * Ids of coincident nodes are stored in output arrays in the \ref numbering-indirect format.
279 * \param [in] prec - minimal absolute distance (using infinite norm) between two nodes at which they are
280 * considered not coincident.
281 * \param [in] limitNodeId - limit node id. If all nodes within a group of coincident
282 * nodes have id strictly lower than \a limitTupleId then they are not
283 * returned. Put -1 to this parameter to have all nodes treated.
284 * \param [out] comm - the array holding ids of coincident nodes.
285 * \a comm->getNumberOfComponents() == 1.
286 * \a comm->getNumberOfTuples() == \a commIndex->back(). The caller
287 * is to delete this array using decrRef() as it is no more needed.
288 * \param [out] commIndex - the array dividing all ids stored in \a comm into
289 * groups of (ids of) coincident nodes (\ref numbering-indirect). Its every value is a tuple
290 * index where a next group of nodes begins. For example the second
291 * group of nodes in \a comm is described by following range of indices:
292 * [ \a commIndex[1], \a commIndex[2] ). \a commIndex->getNumberOfTuples()-1
293 * gives the number of groups of coincident nodes. The caller
294 * is to delete this array using decrRef() as it is no more needed.
295 * \throw If the coordinates array is not set.
297 * \if ENABLE_EXAMPLES
298 * \ref cpp_mcpointset_findcommonnodes "Here is a C++ example".<br>
299 * \ref py_mcpointset_findcommonnodes "Here is a Python example".
302 void MEDCouplingPointSet::findCommonNodes(double prec, mcIdType limitNodeId, DataArrayIdType *&comm, DataArrayIdType *&commIndex) const
305 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::findCommonNodes : no coords specified !");
306 _coords->findCommonTuples(prec,limitNodeId,comm,commIndex);
310 * Finds nodes located at distances lower that \a eps from a given point.
311 * \param [in] pos - pointer to coordinates of the point. This array is expected to
312 * be of length \a this->getSpaceDimension() at least, else the
313 * behavior is not warranted.
314 * \param [in] eps - the lowest distance between a point and a node (using infinite norm) at which the node is
315 * not returned by this method.
316 * \return DataArrayIdType * - a new instance of DataArrayIdType holding ids of nodes
317 * close to the point. The caller is to delete this
318 * array using decrRef() as it is no more needed.
319 * \throw If the coordinates array is not set.
321 * \if ENABLE_EXAMPLES
322 * \ref cpp_mcpointset_getnodeidsnearpoint "Here is a C++ example".<br>
323 * \ref py_mcpointset_getnodeidsnearpoint "Here is a Python example".
326 DataArrayIdType *MEDCouplingPointSet::getNodeIdsNearPoint(const double *pos, double eps) const
328 DataArrayIdType *c=0,*cI=0;
329 getNodeIdsNearPoints(pos,1,eps,c,cI);
330 MCAuto<DataArrayIdType> cITmp(cI);
335 * Finds nodes located at distances lower that \a eps from given points.
336 * \param [in] pos - pointer to coordinates of the points. This array is expected to
337 * be of length \a nbOfPoints * \a this->getSpaceDimension() at least, else the
338 * behavior is not warranted.
339 * \param [in] nbOfPoints - number of points whose coordinates are given by \a pos
341 * \param [in] eps - the lowest distance between (using infinite norm) a point and a node at which the node is
342 * not returned by this method.
343 * \param [out] c - array (\ref numbering-indirect) returning ids of nodes located closer than \a eps to the
344 * given points. The caller
345 * is to delete this array using decrRef() as it is no more needed.
346 * \param [out] cI - for each i-th given point, the array specifies tuples of \a c
347 * holding ids of nodes close to the i-th point (\ref numbering-indirect). <br>The i-th value of \a cI is an
348 * index of tuple of \a c holding id of a first (if any) node close to the
349 * i-th given point. Difference between the i-th and (i+1)-th value of \a cI
350 * (i.e. \a cI[ i+1 ] - \a cI[ i ]) defines number of nodes close to the i-th
351 * point (that can be zero!). For example, the group of nodes close to the
352 * second point is described by following range of indices [ \a cI[1], \a cI[2] ).
353 * The caller is to delete this array using decrRef() as it is no more needed.
354 * \throw If the coordinates array is not set.
356 * \if ENABLE_EXAMPLES
357 * \ref cpp_mcpointset_getnodeidsnearpoints "Here is a C++ example".<br>
358 * \ref py_mcpointset_getnodeidsnearpoints "Here is a Python example".
361 void MEDCouplingPointSet::getNodeIdsNearPoints(const double *pos, mcIdType nbOfPoints, double eps, DataArrayIdType *& c, DataArrayIdType *& cI) const
364 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::getNodeIdsNearPoint : no coordiantes set !");
365 std::size_t spaceDim=getSpaceDimension();
366 MCAuto<DataArrayDouble> points=DataArrayDouble::New();
367 points->useArray(pos,false,DeallocType::CPP_DEALLOC,nbOfPoints,spaceDim);
368 _coords->computeTupleIdsNearTuples(points,eps,c,cI);
372 * @param comm in param in the same format than one returned by findCommonNodes method (\ref numbering-indirect).
373 * @param commIndex in param in the same format than one returned by findCommonNodes method (\ref numbering-indirect).
374 * @param newNbOfNodes new number of nodes
375 * @return the old to new correspondence array.
377 DataArrayIdType *MEDCouplingPointSet::buildNewNumberingFromCommonNodesFormat(const DataArrayIdType *comm, const DataArrayIdType *commIndex,
378 mcIdType& newNbOfNodes) const
381 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::buildNewNumberingFromCommonNodesFormat : no coords specified !");
382 return DataArrayIdType::ConvertIndexArrayToO2N(getNumberOfNodes(),comm->begin(),commIndex->begin(),commIndex->end(),newNbOfNodes);
386 * Permutes and possibly removes nodes as specified by \a newNodeNumbers array.
387 * If \a newNodeNumbers[ i ] < 0 then the i-th node is removed,
388 * else \a newNodeNumbers[ i ] is a new id of the i-th node. The nodal connectivity
389 * array is modified accordingly.
390 * \param [in] newNodeNumbers - a permutation array, of length \a
391 * this->getNumberOfNodes(), in "Old to New" mode.
392 * See \ref numbering for more info on renumbering modes.
393 * \param [in] newNbOfNodes - number of nodes remaining after renumbering.
394 * \throw If the coordinates array is not set.
395 * \throw If the nodal connectivity of cells is not defined.
397 * \if ENABLE_EXAMPLES
398 * \ref cpp_mcumesh_renumberNodes "Here is a C++ example".<br>
399 * \ref py_mcumesh_renumberNodes "Here is a Python example".
402 void MEDCouplingPointSet::renumberNodes(const mcIdType *newNodeNumbers, mcIdType newNbOfNodes)
405 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::renumberNodes : no coords specified !");
406 MCAuto<DataArrayDouble> newCoords=_coords->renumberAndReduce(newNodeNumbers,newNbOfNodes);
407 renumberNodesInConn(newNodeNumbers);
408 setCoords(newCoords);//let it here not before renumberNodesInConn because old number of nodes is sometimes used...
412 * Permutes and possibly removes nodes as specified by \a newNodeNumbers array.
413 * If \a newNodeNumbers[ i ] < 0 then the i-th node is removed,
414 * else \a newNodeNumbers[ i ] is a new id of the i-th node. The nodal connectivity
415 * array is modified accordingly. In contrast to renumberNodes(), location
416 * of merged nodes (whose new ids coincide) is changed to be at their barycenter.
417 * \param [in] newNodeNumbers - a permutation array, of length \a
418 * this->getNumberOfNodes(), in "Old to New" mode.
419 * See \ref numbering for more info on renumbering modes.
420 * \param [in] newNbOfNodes - number of nodes remaining after renumbering, which is
421 * actually one more than the maximal id in \a newNodeNumbers.
422 * \throw If the coordinates array is not set.
423 * \throw If the nodal connectivity of cells is not defined.
425 * \if ENABLE_EXAMPLES
426 * \ref cpp_mcumesh_renumberNodes "Here is a C++ example".<br>
427 * \ref py_mcumesh_renumberNodes "Here is a Python example".
430 void MEDCouplingPointSet::renumberNodesCenter(const mcIdType *newNodeNumbers, mcIdType newNbOfNodes)
432 DataArrayDouble *newCoords=DataArrayDouble::New();
433 std::vector<mcIdType> div(newNbOfNodes);
434 std::size_t spaceDim=getSpaceDimension();
435 newCoords->alloc(newNbOfNodes,spaceDim);
436 newCoords->copyStringInfoFrom(*_coords);
437 newCoords->fillWithZero();
438 mcIdType oldNbOfNodes=getNumberOfNodes();
439 double *ptToFill=newCoords->getPointer();
440 const double *oldCoordsPtr=_coords->getConstPointer();
441 for(mcIdType i=0;i<oldNbOfNodes;i++)
443 std::transform(oldCoordsPtr+i*spaceDim,oldCoordsPtr+(i+1)*spaceDim,ptToFill+newNodeNumbers[i]*spaceDim,
444 ptToFill+newNodeNumbers[i]*spaceDim,std::plus<double>());
445 div[newNodeNumbers[i]]++;
447 for(mcIdType i=0;i<newNbOfNodes;i++)
448 ptToFill=std::transform(ptToFill,ptToFill+spaceDim,ptToFill,std::bind(std::multiplies<double>(),std::placeholders::_1,1./(double)div[i]));
449 setCoords(newCoords);
450 newCoords->decrRef();
451 renumberNodesInConn(newNodeNumbers);
455 * Computes the minimum box bounding all nodes. The edges of the box are parallel to
456 * the Cartesian coordinate axes. The bounding box is described by coordinates of its
457 * two extremum points with minimal and maximal coordinates.
458 * \param [out] bbox - array filled with coordinates of extremum points in "no
459 * interlace" mode, i.e. xMin, xMax, yMin, yMax, zMin, zMax (if in 3D). This
460 * array, of length 2 * \a this->getSpaceDimension() at least, is to be
461 * pre-allocated by the caller.
462 * \throw If the coordinates array is not set.
464 * \if ENABLE_EXAMPLES
465 * \ref cpp_mcpointset_getBoundingBox "Here is a C++ example".<br>
466 * \ref py_mcpointset_getBoundingBox "Here is a Python example".
469 void MEDCouplingPointSet::getBoundingBox(double *bbox) const
472 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::getBoundingBox : Coordinates not set !");
473 _coords->getMinMaxPerComponent(bbox);
477 * Removes "free" nodes, i.e. nodes not used to define any element.
478 * \throw If the coordinates array is not set.
479 * \throw If the elements are not defined.
481 void MEDCouplingPointSet::zipCoords()
484 DataArrayIdType *traducer=zipCoordsTraducer();
488 /*! \cond HIDDEN_ITEMS */
489 struct MEDCouplingCompAbs
491 bool operator()(double x, double y) { return std::abs(x)<std::abs(y);}
496 * Returns the carateristic dimension of \a this point set, that is a maximal
497 * absolute values of node coordinates.
498 * \throw If the coordinates array is not set.
500 double MEDCouplingPointSet::getCaracteristicDimension() const
503 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::getCaracteristicDimension : Coordinates not set !");
504 const double *coords=_coords->getConstPointer();
505 std::size_t nbOfValues=_coords->getNbOfElems();
506 return std::abs(*std::max_element(coords,coords+nbOfValues,MEDCouplingCompAbs()));
510 * This method recenter coordinates of nodes in \b this in order to be centered at the origin to benefit about the advantages of the precision to be around the box
511 * around origin of 'radius' 1.
513 * \warning this method is non const and alterates coordinates in \b this without modifying.
514 * \param [in] eps absolute epsilon. under that value of delta between max and min no scale is performed.
517 void MEDCouplingPointSet::recenterForMaxPrecision(double eps)
520 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::recenterForMaxPrecision : Coordinates not set !");
521 _coords->recenterForMaxPrecision(eps);
526 * Rotates \a this set of nodes by \a angle around either an axis (in 3D) or a point
528 * \param [in] center - coordinates either of an origin of rotation axis (in 3D) or
529 * of center of rotation (in 2D). This array is to be of size \a
530 * this->getSpaceDimension() at least.
531 * \param [in] vector - 3 components of a vector defining direction of the rotation
532 * axis in 3D. In 2D this parameter is not used.
533 * \param [in] angle - the rotation angle in radians.
534 * \throw If the coordinates array is not set.
535 * \throw If \a this->getSpaceDimension() != 2 && \a this->getSpaceDimension() != 3.
536 * \throw If \a center == NULL
537 * \throw If \a vector == NULL && \a this->getSpaceDimension() == 3.
538 * \throw If Magnitude of \a vector is zero.
540 * \if ENABLE_EXAMPLES
541 * \ref cpp_mcpointset_rotate "Here is a C++ example".<br>
542 * \ref py_mcpointset_rotate "Here is a Python example".
545 void MEDCouplingPointSet::rotate(const double *center, const double *vector, double angle)
547 std::size_t spaceDim=getSpaceDimension();
549 rotate3D(center,vector,angle);
551 rotate2D(center,angle);
553 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::rotate : invalid space dim for rotation must be 2 or 3");
554 _coords->declareAsNew();
559 * Translates \a this set of nodes.
560 * \param [in] vector - components of a translation vector. This array is to be of
561 * size \a this->getSpaceDimension() at least.
562 * \throw If the coordinates array is not set.
563 * \throw If \a vector == NULL.
565 * \if ENABLE_EXAMPLES
566 * \ref cpp_mcpointset_translate "Here is a C++ example".<br>
567 * \ref py_mcpointset_translate "Here is a Python example".
570 void MEDCouplingPointSet::translate(const double *vector)
573 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::translate : NULL input vector !");
575 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::translate : no coordinates set !");
576 double *coords=_coords->getPointer();
577 mcIdType nbNodes=getNumberOfNodes();
578 std::size_t dim=getSpaceDimension();
579 for(mcIdType i=0; i<nbNodes; i++)
580 for(std::size_t idim=0; idim<dim;idim++)
581 coords[i*dim+idim]+=vector[idim];
582 _coords->declareAsNew();
588 * Applies scaling transformation to \a this set of nodes.
589 * \param [in] point - coordinates of a scaling center. This array is to be of
590 * size \a this->getSpaceDimension() at least.
591 * \param [in] factor - a scale factor.
592 * \throw If the coordinates array is not set.
593 * \throw If \a point == NULL.
595 * \if ENABLE_EXAMPLES
596 * \ref cpp_mcpointset_scale "Here is a C++ example".<br>
597 * \ref py_mcpointset_scale "Here is a Python example".
600 void MEDCouplingPointSet::scale(const double *point, double factor)
603 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::scale : NULL input point !");
605 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::scale : no coordinates set !");
606 double *coords=_coords->getPointer();
607 mcIdType nbNodes=getNumberOfNodes();
608 std::size_t dim=getSpaceDimension();
609 for(mcIdType i=0;i<nbNodes;i++)
611 std::transform(coords+i*dim,coords+(i+1)*dim,point,coords+i*dim,std::minus<double>());
612 std::transform(coords+i*dim,coords+(i+1)*dim,coords+i*dim,std::bind(std::multiplies<double>(),std::placeholders::_1,factor));
613 std::transform(coords+i*dim,coords+(i+1)*dim,point,coords+i*dim,std::plus<double>());
615 _coords->declareAsNew();
620 * Converts \a this set of points to an other dimension by changing number of
621 * components of point coordinates. If the dimension increases, added components
622 * are filled with \a dftValue. If the dimension decreases, last components are lost.
623 * If the new dimension is same as \a this->getSpaceDimension(), nothing is done.
624 * \param [in] newSpaceDim - the new space dimension.
625 * \param [in] dftValue - the value to assign to added components of point coordinates
626 * (if the dimension increases).
627 * \throw If the coordinates array is not set.
628 * \throw If \a newSpaceDim < 1.
630 void MEDCouplingPointSet::changeSpaceDimension(int newSpaceDim, double dftValue)
633 throw INTERP_KERNEL::Exception("changeSpaceDimension must be called on an MEDCouplingPointSet instance with coordinates set !");
635 throw INTERP_KERNEL::Exception("changeSpaceDimension must be called a newSpaceDim >=1 !");
636 int oldSpaceDim=getSpaceDimension();
637 if(newSpaceDim==oldSpaceDim)
639 DataArrayDouble *newCoords=getCoords()->changeNbOfComponents(newSpaceDim,dftValue);
640 setCoords(newCoords);
641 newCoords->decrRef();
646 * Substitutes \a this->_coords with \a other._coords provided that coordinates of
647 * the two point sets match with a specified precision, else an exception is thrown.
648 * \param [in] other - the other point set whose coordinates array will be used by
649 * \a this point set in case of their equality.
650 * \param [in] epsilon - the precision used to compare coordinates.
651 * \throw If the coordinates array of \a this is not set.
652 * \throw If the coordinates array of \a other is not set.
653 * \throw If the coordinates of \a this and \a other do not match.
655 void MEDCouplingPointSet::tryToShareSameCoords(const MEDCouplingPointSet& other, double epsilon)
657 if(_coords==other._coords)
660 throw INTERP_KERNEL::Exception("Current instance has no coords whereas other has !");
662 throw INTERP_KERNEL::Exception("Other instance has no coords whereas current has !");
663 if(!_coords->isEqualWithoutConsideringStr(*other._coords,epsilon))
664 throw INTERP_KERNEL::Exception("Coords are not the same !");
665 setCoords(other._coords);
669 * This method duplicates the nodes whose ids are in [\b nodeIdsToDuplicateBg, \b nodeIdsToDuplicateEnd) and put the result of their duplication at the end
670 * of existing node ids.
672 * \param [in] nodeIdsToDuplicateBg begin of node ids (included) to be duplicated in connectivity only
673 * \param [in] nodeIdsToDuplicateEnd end of node ids (excluded) to be duplicated in connectivity only
675 void MEDCouplingPointSet::duplicateNodesInCoords(const mcIdType *nodeIdsToDuplicateBg, const mcIdType *nodeIdsToDuplicateEnd)
678 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::duplicateNodesInCoords : no coords set !");
679 MCAuto<DataArrayDouble> newCoords=_coords->selectByTupleIdSafe(nodeIdsToDuplicateBg,nodeIdsToDuplicateEnd);
680 MCAuto<DataArrayDouble> newCoords2=DataArrayDouble::Aggregate(_coords,newCoords);
681 setCoords(newCoords2);
685 * Finds nodes located at distance lower that \a eps from a specified plane.
686 * \param [in] pt - 3 components of a point defining location of the plane.
687 * \param [in] vec - 3 components of a normal vector to the plane. Vector magnitude
688 * must be greater than 10*\a eps.
689 * \param [in] eps - maximal distance of a node from the plane at which the node is
690 * considered to lie on the plane.
691 * \param [in,out] nodes - a vector returning ids of found nodes. This vector is not
692 * cleared before filling in.
693 * \throw If the coordinates array is not set.
694 * \throw If \a pt == NULL.
695 * \throw If \a vec == NULL.
696 * \throw If the magnitude of \a vec is zero.
697 * \throw If \a this->getSpaceDimension() != 3.
699 void MEDCouplingPointSet::findNodesOnPlane(const double *pt, const double *vec, double eps, std::vector<mcIdType>& nodes) const
701 if(getSpaceDimension()!=3)
702 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::findNodesOnPlane : Invalid spacedim to be applied on this ! Must be equal to 3 !");
704 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::findNodesOnPlane : NULL point pointer specified !");
706 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::findNodesOnPlane : NULL vector pointer specified !");
707 mcIdType nbOfNodes=getNumberOfNodes();
708 double a=vec[0],b=vec[1],c=vec[2],d=-pt[0]*vec[0]-pt[1]*vec[1]-pt[2]*vec[2];
709 double deno=sqrt(a*a+b*b+c*c);
710 if(deno<std::numeric_limits<double>::min())
711 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::findNodesOnPlane : vector pointer specified has norm equal to 0. !");
712 const double *work=_coords->getConstPointer();
713 for(mcIdType i=0;i<nbOfNodes;i++)
715 if(std::abs(a*work[0]+b*work[1]+c*work[2]+d)/deno<eps)
722 * Finds nodes located at distance lower that \a eps from a specified line in 2D and 3D.
723 * \param [in] pt - components of coordinates of an initial point of the line. This
724 * array is to be of size \a this->getSpaceDimension() at least.
725 * \param [in] vec - components of a vector defining the line direction. This array
726 * is to be of size \a this->getSpaceDimension() at least. Vector magnitude
727 * must be greater than 10*\a eps.
728 * \param [in] eps - maximal distance of a node from the line at which the node is
729 * considered to lie on the line.
730 * \param [in,out] nodes - a vector returning ids of found nodes. This vector is not
731 * cleared before filling in.
732 * \throw If the coordinates array is not set.
733 * \throw If \a pt == NULL.
734 * \throw If \a vec == NULL.
735 * \throw If the magnitude of \a vec is zero.
736 * \throw If ( \a this->getSpaceDimension() != 3 && \a this->getSpaceDimension() != 2 ).
738 void MEDCouplingPointSet::findNodesOnLine(const double *pt, const double *vec, double eps, std::vector<mcIdType>& nodes) const
740 std::size_t spaceDim=getSpaceDimension();
741 if(spaceDim!=2 && spaceDim!=3)
742 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::findNodesOnLine : Invalid spacedim to be applied on this ! Must be equal to 2 or 3 !");
744 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::findNodesOnLine : NULL point pointer specified !");
746 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::findNodesOnLine : NULL vector pointer specified !");
747 mcIdType nbOfNodes=getNumberOfNodes();
749 for(std::size_t i=0;i<spaceDim;i++)
751 double deno=sqrt(den);
753 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::findNodesOnLine : Invalid given direction vector ! Norm is too small !");
754 INTERP_KERNEL::AutoPtr<double> vecn=new double[spaceDim];
755 for(std::size_t i=0;i<spaceDim;i++)
757 const double *work=_coords->getConstPointer();
760 for(mcIdType i=0;i<nbOfNodes;i++)
762 if(std::abs(vecn[0]*(work[1]-pt[1])-vecn[1]*(work[0]-pt[0]))<eps)
769 for(mcIdType i=0;i<nbOfNodes;i++)
771 double a=vecn[0]*(work[1]-pt[1])-vecn[1]*(work[0]-pt[0]);
772 double b=vecn[1]*(work[2]-pt[2])-vecn[2]*(work[1]-pt[1]);
773 double c=vecn[2]*(work[0]-pt[0])-vecn[0]*(work[2]-pt[2]);
774 if(std::sqrt(a*a+b*b+c*c)<eps)
782 * Returns a new array of node coordinates by concatenating node coordinates of two
783 * given point sets, so that (1) the number of nodes in the result array is a sum of the
784 * number of nodes of given point sets and (2) the number of component in the result array
785 * is same as that of each of given point sets. Info on components is copied from the first
786 * of the given point set. Space dimension of the given point sets must be the same.
787 * \param [in] m1 - a point set whose coordinates will be included in the result array.
788 * \param [in] m2 - another point set whose coordinates will be included in the
790 * \return DataArrayDouble * - the new instance of DataArrayDouble.
791 * The caller is to delete this result array using decrRef() as it is no more
793 * \throw If both \a m1 and \a m2 are NULL.
794 * \throw If \a m1->getSpaceDimension() != \a m2->getSpaceDimension().
796 DataArrayDouble *MEDCouplingPointSet::MergeNodesArray(const MEDCouplingPointSet *m1, const MEDCouplingPointSet *m2)
798 int spaceDim=m1->getSpaceDimension();
799 if(spaceDim!=m2->getSpaceDimension())
800 throw INTERP_KERNEL::Exception("Mismatch in SpaceDim during call of MergeNodesArray !");
801 return DataArrayDouble::Aggregate(m1->getCoords(),m2->getCoords());
804 DataArrayDouble *MEDCouplingPointSet::MergeNodesArray(const std::vector<const MEDCouplingPointSet *>& ms)
807 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::MergeNodesArray : input array must be NON EMPTY !");
808 std::vector<const MEDCouplingPointSet *>::const_iterator it=ms.begin();
809 std::vector<const DataArrayDouble *> coo(ms.size());
810 int spaceDim=(*it)->getSpaceDimension();
811 coo[0]=(*it++)->getCoords();
812 if(!coo[0]->isAllocated())
813 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::MergeNodesArray : first element in coordinates is not allocated !");
814 for(int i=1;it!=ms.end();it++,i++)
816 const DataArrayDouble *tmp=(*it)->getCoords();
819 if(tmp->isAllocated())
821 if((*it)->getSpaceDimension()==spaceDim)
824 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::MergeNodesArray : Mismatch in SpaceDim !");
827 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::MergeNodesArray : Presence of a non allocated array !");
830 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::MergeNodesArray : Empty coords detected !");
832 return DataArrayDouble::Aggregate(coo);
836 * Factory to build new instance of instanciable subclasses of MEDCouplingPointSet.
837 * This method is used during unserialization process.
839 MEDCouplingPointSet *MEDCouplingPointSet::BuildInstanceFromMeshType(MEDCouplingMeshType type)
844 return MEDCouplingUMesh::New();
845 case SINGLE_STATIC_GEO_TYPE_UNSTRUCTURED:
846 return MEDCoupling1SGTUMesh::New();
847 case SINGLE_DYNAMIC_GEO_TYPE_UNSTRUCTURED:
848 return MEDCoupling1DGTUMesh::New();
850 throw INTERP_KERNEL::Exception("Invalid type of mesh specified");
855 * First step of serialization process. Used by ParaMEDMEM and MEDCouplingCorba to transfert data between process.
857 void MEDCouplingPointSet::getTinySerializationInformation(std::vector<double>& tinyInfoD, std::vector<mcIdType>& tinyInfo, std::vector<std::string>& littleStrings) const
860 double time=getTime(it,order);
863 int spaceDim=getSpaceDimension();
864 littleStrings.resize(spaceDim+4);
865 littleStrings[0]=getName();
866 littleStrings[1]=getDescription();
867 littleStrings[2]=_coords->getName();
868 littleStrings[3]=getTimeUnit();
869 for(int i=0;i<spaceDim;i++)
870 littleStrings[i+4]=getCoords()->getInfoOnComponent(i);
872 tinyInfo.push_back(getType());
873 tinyInfo.push_back(spaceDim);
874 tinyInfo.push_back(getNumberOfNodes());
875 tinyInfo.push_back(it);
876 tinyInfo.push_back(order);
877 tinyInfoD.push_back(time);
881 littleStrings.resize(3);
882 littleStrings[0]=getName();
883 littleStrings[1]=getDescription();
884 littleStrings[2]=getTimeUnit();
886 tinyInfo.push_back(getType());
887 tinyInfo.push_back(-1);
888 tinyInfo.push_back(-1);
889 tinyInfo.push_back(it);
890 tinyInfo.push_back(order);
891 tinyInfoD.push_back(time);
896 * Third and final step of serialization process.
898 void MEDCouplingPointSet::serialize(DataArrayIdType *&a1, DataArrayDouble *&a2) const
902 a2=const_cast<DataArrayDouble *>(getCoords());
910 * Second step of serialization process.
911 * @param tinyInfo must be equal to the result given by getTinySerializationInformation method.
913 void MEDCouplingPointSet::resizeForUnserialization(const std::vector<mcIdType>& tinyInfo, DataArrayIdType *a1, DataArrayDouble *a2, std::vector<std::string>& littleStrings) const
915 if(tinyInfo[2]>=0 && tinyInfo[1]>=1)
917 a2->alloc(tinyInfo[2],tinyInfo[1]);
918 littleStrings.resize(tinyInfo[1]+4);
922 littleStrings.resize(3);
927 * Second and final unserialization process.
928 * @param tinyInfo must be equal to the result given by getTinySerializationInformation method.
930 void MEDCouplingPointSet::unserialization(const std::vector<double>& tinyInfoD, const std::vector<mcIdType>& tinyInfo, const DataArrayIdType *a1, DataArrayDouble *a2, const std::vector<std::string>& littleStrings)
932 if(tinyInfo[2]>=0 && tinyInfo[1]>=1)
935 setName(littleStrings[0]);
936 setDescription(littleStrings[1]);
937 a2->setName(littleStrings[2]);
938 setTimeUnit(littleStrings[3]);
939 for(mcIdType i=0;i<tinyInfo[1];i++)
940 getCoords()->setInfoOnComponent(i,littleStrings[i+4]);
941 setTime(tinyInfoD[0],FromIdType<int>(tinyInfo[3]),FromIdType<int>(tinyInfo[4]));
945 setName(littleStrings[0]);
946 setDescription(littleStrings[1]);
947 setTimeUnit(littleStrings[2]);
948 setTime(tinyInfoD[0],FromIdType<int>(tinyInfo[3]),FromIdType<int>(tinyInfo[4]));
952 void MEDCouplingPointSet::checkConsistencyLight() const
955 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::checkConsistencyLight : no coordinates set !");
959 * Intersect Bounding Box given 2 Bounding Boxes.
961 bool MEDCouplingPointSet::intersectsBoundingBox(const double* bb1, const double* bb2, int dim, double eps)
963 double* bbtemp = new double[2*dim];
966 for (int i=0; i< dim; i++)
968 double delta = bb1[2*i+1]-bb1[2*i];
969 if ( delta > deltamax )
974 for (int i=0; i<dim; i++)
976 bbtemp[i*2]=bb1[i*2]-deltamax*eps;
977 bbtemp[i*2+1]=bb1[i*2+1]+deltamax*eps;
980 for (int idim=0; idim < dim; idim++)
982 bool intersects = (bbtemp[idim*2]<bb2[idim*2+1])
983 && (bb2[idim*2]<bbtemp[idim*2+1]) ;
995 * Intersect 2 given Bounding Boxes.
997 bool MEDCouplingPointSet::intersectsBoundingBox(const INTERP_KERNEL::DirectedBoundingBox& bb1, const double* bb2, int dim, double eps)
999 double* bbtemp(new double[2*dim]);
1000 double deltamax(0.0);
1002 for (int i=0; i< dim; i++)
1004 double delta = bb2[2*i+1]-bb2[2*i];
1005 if ( delta > deltamax )
1010 for (int i=0; i<dim; i++)
1012 bbtemp[i*2]=bb2[i*2]-deltamax*eps;
1013 bbtemp[i*2+1]=bb2[i*2+1]+deltamax*eps;
1016 bool intersects(!bb1.isDisjointWith(bbtemp));
1022 * 'This' is expected to be of spaceDim==3. Idem for 'center' and 'vect'
1024 void MEDCouplingPointSet::rotate3D(const double *center, const double *vect, double angle)
1026 double *coords(_coords->getPointer());
1027 mcIdType nbNodes(getNumberOfNodes());
1028 DataArrayDouble::Rotate3DAlg(center,vect,angle,nbNodes,coords,coords);
1032 * This method allows to give for each cell in \a trgMesh, how much it interacts with cells of \a srcMesh.
1033 * The returned array can be seen as a weighted array on the target cells of \a trgMesh input parameter.
1035 * \param [in] srcMesh - source mesh
1036 * \param [in] trgMesh - target mesh
1037 * \param [in] eps - precision of the detection
1038 * \return DataArrayIdType * - An array that gives for each cell of \a trgMesh, how many cells in \a srcMesh (regarding the precision of detection \a eps) can interacts.
1040 * \throw If \a srcMesh and \a trgMesh have not the same space dimension.
1042 DataArrayIdType *MEDCouplingPointSet::ComputeNbOfInteractionsWithSrcCells(const MEDCouplingPointSet *srcMesh, const MEDCouplingPointSet *trgMesh, double eps)
1044 if(!srcMesh || !trgMesh)
1045 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::ComputeNbOfInteractionsWithSrcCells : the input meshes must be not NULL !");
1046 MCAuto<DataArrayDouble> sbbox(srcMesh->getBoundingBoxForBBTree(eps)),tbbox(trgMesh->getBoundingBoxForBBTree(eps));
1047 return tbbox->computeNbOfInteractionsWith(sbbox,eps);
1051 * Creates a new MEDCouplingMesh containing a part of cells of \a this mesh. The new
1052 * mesh shares a coordinates array with \a this one. The cells to include to the
1053 * result mesh are specified by an array of cell ids.
1054 * \param [in] start - an array of cell ids to include to the result mesh.
1055 * \param [in] end - specifies the end of the array \a start, so that
1056 * the last value of \a start is \a end[ -1 ].
1057 * \return MEDCouplingMesh * - a new instance of MEDCouplingMesh. The caller is to
1058 * delete this mesh using decrRef() as it is no more needed.
1060 MEDCouplingMesh *MEDCouplingPointSet::buildPart(const mcIdType *start, const mcIdType *end) const
1062 return buildPartOfMySelf(start,end,true);
1066 * Creates a new MEDCouplingMesh containing a part of cells of \a this mesh. The
1067 * cells to include to the result mesh are specified by an array of cell ids.
1068 * <br> This method additionally returns a renumbering map in "Old to New" mode
1069 * which allows the caller to know the mapping between nodes in \a this and the result mesh.
1070 * \param [in] start - an array of cell ids to include to the result mesh.
1071 * \param [in] end - specifies the end of the array \a start, so that
1072 * the last value of \a start is \a end[ -1 ].
1073 * \param [out] arr - a new DataArrayIdType that is the "Old to New" renumbering
1074 * map. The caller is to delete this array using decrRef() as it is no more needed.
1075 * \return MEDCouplingMesh * - a new instance of MEDCouplingMesh. The caller is to
1076 * delete this mesh using decrRef() as it is no more needed.
1078 MEDCouplingMesh *MEDCouplingPointSet::buildPartAndReduceNodes(const mcIdType *start, const mcIdType *end, DataArrayIdType*& arr) const
1080 MCAuto<MEDCouplingPointSet> ret=buildPartOfMySelf(start,end,true);
1081 arr=ret->zipCoordsTraducer();
1086 * This method specialized the MEDCouplingMesh::buildPartRange.
1087 * This method is equivalent to MEDCouplingMesh::buildPart method except that here the cell ids are specified using slice
1088 * \a beginCellIds \a endCellIds and \a stepCellIds.
1089 * \b WARNING , there is a big difference compared to MEDCouplingMesh::buildPart method.
1090 * If the input range is equal all cells in \a this, \a this is returned !
1092 * \return a new ref to be managed by the caller. Warning this ref can be equal to \a this if input slice is exactly equal to the whole cells in the same order.
1094 * \sa MEDCouplingUMesh::buildPartOfMySelfSlice
1096 MEDCouplingMesh *MEDCouplingPointSet::buildPartRange(mcIdType beginCellIds, mcIdType endCellIds, mcIdType stepCellIds) const
1098 if(beginCellIds==0 && endCellIds==ToIdType(getNumberOfCells()) && stepCellIds==1)
1100 MEDCouplingMesh *ret(const_cast<MEDCouplingPointSet *>(this));
1106 return buildPartOfMySelfSlice(beginCellIds,endCellIds,stepCellIds,true);
1111 * This method specialized the MEDCouplingMesh::buildPartRangeAndReduceNodes
1113 * \param [out] beginOut valid only if \a arr not NULL !
1114 * \param [out] endOut valid only if \a arr not NULL !
1115 * \param [out] stepOut valid only if \a arr not NULL !
1116 * \param [out] arr correspondence old to new in node ids.
1118 * \sa MEDCouplingUMesh::buildPartOfMySelfSlice
1120 MEDCouplingMesh *MEDCouplingPointSet::buildPartRangeAndReduceNodes(mcIdType beginCellIds, mcIdType endCellIds, mcIdType stepCellIds, mcIdType& beginOut, mcIdType& endOut, mcIdType& stepOut, DataArrayIdType*& arr) const
1122 MCAuto<MEDCouplingPointSet> ret(buildPartOfMySelfSlice(beginCellIds,endCellIds,stepCellIds,true));
1123 arr=ret->zipCoordsTraducer();
1128 * 'This' is expected to be of spaceDim==2. Idem for 'center' and 'vect'
1130 void MEDCouplingPointSet::rotate2D(const double *center, double angle)
1132 double *coords(_coords->getPointer());
1133 mcIdType nbNodes(getNumberOfNodes());
1134 DataArrayDouble::Rotate2DAlg(center,angle,nbNodes,coords,coords);
1142 static const int MY_SPACEDIM=3;
1143 static const int MY_MESHDIM=2;
1144 typedef mcIdType MyConnType;
1145 static const INTERP_KERNEL::NumberingPolicy My_numPol=INTERP_KERNEL::ALL_C_MODE;
1151 * res should be an empty vector before calling this method.
1152 * This method returns all the node coordinates included in _coords which ids are in [startConn;endConn) and put it into 'res' vector.
1153 * If spaceDim==3 a projection will be done for each nodes on the middle plane containing these all nodes in [startConn;endConn).
1154 * And after each projected nodes are moved to Oxy plane in order to consider these nodes as 2D nodes.
1156 void MEDCouplingPointSet::project2DCellOnXY(const mcIdType *startConn, const mcIdType *endConn, std::vector<double>& res) const
1158 const double *coords(_coords->getConstPointer());
1159 std::size_t spaceDim(getSpaceDimension());
1160 for(const mcIdType *it=startConn;it!=endConn;it++)
1161 res.insert(res.end(),coords+spaceDim*(*it),coords+spaceDim*(*it+1));
1166 std::vector<double> cpy(res);
1167 mcIdType nbNodes=ToIdType(std::distance(startConn,endConn));
1168 INTERP_KERNEL::PlanarIntersector<DummyClsMCPS,mcIdType>::Projection(&res[0],&cpy[0],nbNodes,nbNodes,1.e-12,0./*max distance*/,-1./*min dot*/,0.,true);
1169 res.resize(2*nbNodes);
1170 for(mcIdType i=0;i<nbNodes;i++)
1173 res[2*i+1]=cpy[3*i+1];
1177 throw INTERP_KERNEL::Exception("Invalid spacedim for project2DCellOnXY !");
1181 * low level method that checks that the 2D cell is not a butterfly cell.
1183 bool MEDCouplingPointSet::isButterfly2DCell(const std::vector<double>& res, bool isQuad, double eps)
1185 INTERP_KERNEL::QuadraticPlanarPrecision prec(eps);
1187 std::size_t nbOfNodes(res.size()/2);
1188 std::vector<INTERP_KERNEL::Node *> nodes(nbOfNodes);
1189 for(std::size_t i=0;i<nbOfNodes;i++)
1191 INTERP_KERNEL::Node *tmp=new INTERP_KERNEL::Node(res[2*i],res[2*i+1]);
1194 INTERP_KERNEL::QuadraticPolygon *pol=0;
1196 pol=INTERP_KERNEL::QuadraticPolygon::BuildArcCirclePolygon(nodes);
1198 pol=INTERP_KERNEL::QuadraticPolygon::BuildLinearPolygon(nodes);
1199 bool ret(pol->isButterflyAbs());
1205 * This method compares 2 cells coming from two unstructured meshes : \a this and \a other.
1206 * This method compares 2 cells having the same id 'cellId' in \a this and \a other.
1208 bool MEDCouplingPointSet::areCellsFrom2MeshEqual(const MEDCouplingPointSet *other, mcIdType cellId, double prec) const
1210 if(getTypeOfCell(cellId)!=other->getTypeOfCell(cellId))
1212 std::vector<mcIdType> c1,c2;
1213 getNodeIdsOfCell(cellId,c1);
1214 other->getNodeIdsOfCell(cellId,c2);
1215 std::size_t sz(c1.size());
1218 for(std::size_t i=0;i<sz;i++)
1220 std::vector<double> n1,n2;
1221 getCoordinatesOfNode(c1[0],n1);
1222 other->getCoordinatesOfNode(c2[0],n2);
1223 std::transform(n1.begin(),n1.end(),n2.begin(),n1.begin(),std::minus<double>());
1224 std::transform(n1.begin(),n1.end(),n1.begin(),[](double c){return fabs(c);});
1225 if(*std::max_element(n1.begin(),n1.end())>prec)
1232 * Substitutes node coordinates array of \a this mesh with that of \a other mesh
1233 * (i.e. \a this->_coords with \a other._coords) provided that coordinates of the two
1234 * meshes match with a specified precision, else an exception is thrown and \a this
1235 * remains unchanged. In case of success the nodal connectivity of \a this mesh
1236 * is permuted according to new order of nodes.
1237 * Contrary to tryToShareSameCoords() this method makes a deeper analysis of
1238 * coordinates (and so more expensive) than simple equality.
1239 * \param [in] other - the other mesh whose node coordinates array will be used by
1240 * \a this mesh in case of their equality.
1241 * \param [in] epsilon - the precision used to compare coordinates (using infinite norm).
1242 * \throw If the coordinates array of \a this is not set.
1243 * \throw If the coordinates array of \a other is not set.
1244 * \throw If the coordinates of \a this and \a other do not match.
1246 void MEDCouplingPointSet::tryToShareSameCoordsPermute(const MEDCouplingPointSet& other, double epsilon)
1248 const DataArrayDouble *coords=other.getCoords();
1250 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::tryToShareSameCoordsPermute : No coords specified in other !");
1252 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::tryToShareSameCoordsPermute : No coords specified in this whereas there is any in other !");
1253 mcIdType otherNbOfNodes=other.getNumberOfNodes();
1254 MCAuto<DataArrayDouble> newCoords=MergeNodesArray(&other,this);
1256 MCAuto<DataArrayDouble> oldCoords=_coords;
1257 setCoords(newCoords);
1258 bool areNodesMerged;
1259 mcIdType newNbOfNodes;
1260 MCAuto<DataArrayIdType> da=buildPermArrayForMergeNode(epsilon,otherNbOfNodes,areNodesMerged,newNbOfNodes);
1263 setCoords(oldCoords);
1264 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::tryToShareSameCoordsPermute fails : no nodes are mergeable with specified given epsilon !");
1266 mcIdType maxId=*std::max_element(da->getConstPointer(),da->getConstPointer()+otherNbOfNodes);
1267 const mcIdType *pt=std::find_if(da->getConstPointer()+otherNbOfNodes,da->getConstPointer()+da->getNbOfElems(),std::bind(std::greater<mcIdType>(),std::placeholders::_1,maxId));
1268 if(pt!=da->getConstPointer()+da->getNbOfElems())
1270 setCoords(oldCoords);
1271 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::tryToShareSameCoordsPermute fails : some nodes in this are not in other !");
1273 setCoords(oldCoords);
1274 renumberNodesInConn(da->getConstPointer()+otherNbOfNodes);
1278 MEDCouplingPointSet *MEDCouplingPointSet::buildPartOfMySelf(const mcIdType *begin, const mcIdType *end, bool keepCoords) const
1280 MCAuto<MEDCouplingPointSet> ret=buildPartOfMySelfKeepCoords(begin,end);
1286 MEDCouplingPointSet *MEDCouplingPointSet::buildPartOfMySelfSlice(mcIdType start, mcIdType end, mcIdType step, bool keepCoords) const
1288 MCAuto<MEDCouplingPointSet> ret=buildPartOfMySelfKeepCoordsSlice(start,end,step);
1295 Creates a new MEDCouplingUMesh containing some cells of \a this mesh. The cells to
1296 copy are selected basing on specified node ids and the value of \a fullyIn
1297 parameter. If \a fullyIn ==\c true, a cell is copied if its all nodes are in the
1298 array \a begin of node ids. If \a fullyIn ==\c false, a cell is copied if any its
1299 node is in the array of node ids. The created mesh shares the node coordinates array
1301 * \param [in] begin - the array of node ids.
1302 * \param [in] end - a pointer to the (last+1)-th element of \a begin.
1303 * \param [in] fullyIn - if \c true, then cells whose all nodes are in the
1304 * array \a begin are copied, else cells whose any node is in the
1305 * array \a begin are copied.
1306 * \return MEDCouplingPointSet * - new instance of MEDCouplingUMesh. The caller is
1307 * to delete this mesh using decrRef() as it is no more needed.
1308 * \throw If the coordinates array is not set.
1309 * \throw If the nodal connectivity of cells is not defined.
1310 * \throw If any node id in \a begin is not valid.
1312 * \if ENABLE_EXAMPLES
1313 * \ref cpp_mcumesh_buildPartOfMySelfNode "Here is a C++ example".<br>
1314 * \ref py_mcumesh_buildPartOfMySelfNode "Here is a Python example".
1317 MEDCouplingPointSet *MEDCouplingPointSet::buildPartOfMySelfNode(const mcIdType *begin, const mcIdType *end, bool fullyIn) const
1319 DataArrayIdType *cellIdsKept=0;
1320 fillCellIdsToKeepFromNodeIds(begin,end,fullyIn,cellIdsKept);
1321 MCAuto<DataArrayIdType> cellIdsKept2(cellIdsKept);
1322 return buildPartOfMySelf(cellIdsKept->begin(),cellIdsKept->end(),true);
1326 * Removes duplicates of cells from \a this mesh and returns an array mapping between
1327 * new and old cell ids in "Old to New" mode. Nothing is changed in \a this mesh if no
1328 * equal cells found.
1329 * \warning Cells of the result mesh are \b not sorted by geometric type, hence,
1330 * to write this mesh to the MED file, its cells must be sorted using
1331 * sortCellsInMEDFileFrmt().
1332 * \param [in] compType - specifies a cell comparison technique. Meaning of its
1333 * valid values [0,1,2] is as follows.
1334 * - 0 : "exact". Two cells are considered equal \c iff they have exactly same nodal
1335 * connectivity and type. This is the strongest policy.
1336 * - 1 : "permuted same orientation". Two cells are considered equal \c iff they
1337 * are based on same nodes and have the same type and orientation.
1338 * - 2 : "nodal". Two cells are considered equal \c iff they
1339 * are based on same nodes and have the same type. This is the weakest
1340 * policy, it can be used by users not sensitive to cell orientation.
1341 * \param [in] startCellId - specifies the cell id at which search for equal cells
1342 * starts. By default it is 0, which means that all cells in \a this will be
1344 * \return DataArrayIdType - a new instance of DataArrayIdType, of length \a
1345 * this->getNumberOfCells() before call of this method. The caller is to
1346 * delete this array using decrRef() as it is no more needed.
1347 * \throw If the coordinates array is not set.
1348 * \throw If the nodal connectivity of cells is not defined.
1349 * \throw If the nodal connectivity includes an invalid id.
1351 * \if ENABLE_EXAMPLES
1352 * \ref cpp_mcumesh_zipConnectivityTraducer "Here is a C++ example".<br>
1353 * \ref py_mcumesh_zipConnectivityTraducer "Here is a Python example".
1356 DataArrayIdType *MEDCouplingPointSet::zipConnectivityTraducer(int compType, mcIdType startCellId)
1358 DataArrayIdType *commonCells(nullptr),*commonCellsI(nullptr);
1359 findCommonCells(compType,startCellId,commonCells,commonCellsI);
1360 MCAuto<DataArrayIdType> commonCellsTmp(commonCells),commonCellsITmp(commonCellsI);
1361 mcIdType newNbOfCells=-1;
1362 MCAuto<DataArrayIdType> ret=DataArrayIdType::ConvertIndexArrayToO2N(ToIdType(getNumberOfCells()),commonCells->begin(),commonCellsI->begin(),commonCellsI->end(),newNbOfCells);
1363 MCAuto<DataArrayIdType> ret2=ret->invertArrayO2N2N2O(newNbOfCells);
1364 MCAuto<MEDCouplingPointSet> self=buildPartOfMySelf(ret2->begin(),ret2->end(),true);
1365 shallowCopyConnectivityFrom(self);
1370 * This const method states if the nodal connectivity of this fetches all nodes in \a this.
1371 * In other words, this method looks is there are no orphan nodes in \a this.
1372 * \sa zipCoordsTraducer, getNodeIdsInUse, computeFetchedNodeIds.
1374 bool MEDCouplingPointSet::areAllNodesFetched() const
1376 checkFullyDefined();
1377 mcIdType nbNodes(getNumberOfNodes());
1378 std::vector<bool> fetchedNodes(nbNodes,false);
1379 computeNodeIdsAlg(fetchedNodes);
1380 return std::find(fetchedNodes.begin(),fetchedNodes.end(),false)==fetchedNodes.end();
1384 * Checks if \a this and \a other meshes are geometrically equivalent, else an
1385 * exception is thrown. The meshes are
1386 * considered equivalent if (1) \a this mesh contains the same nodes as the \a other
1387 * mesh (with a specified precision) and (2) \a this mesh contains the same cells as
1388 * the \a other mesh (with use of a specified cell comparison technique). The mapping
1389 * from \a other to \a this for nodes and cells is returned via out parameters.
1391 * If \a cellCor is null (or Py_None) it means that for all #i cell in \a other is equal to cell # i in \a this.
1393 * If \a nodeCor is null (or Py_None) it means that for all #i node in \a other is equal to node # i in \a this.
1395 * So null (or Py_None) returned in \a cellCor and/or \a nodeCor means identity array. This is for optimization reason to avoid building
1396 * useless arrays for some \a levOfCheck (for example 0).
1398 * \param [in] other - the mesh to compare with.
1399 * \param [in] cellCompPol - id [0-2] of cell comparison method. See meaning of
1400 * each method in description of MEDCouplingPointSet::zipConnectivityTraducer().
1401 * \param [in] prec - the precision used to compare nodes of the two meshes.
1402 * \param [out] cellCor - a cell permutation array in "Old to New" mode. The caller is
1403 * to delete this array using decrRef() as it is no more needed.
1404 * \param [out] nodeCor - a node permutation array in "Old to New" mode. The caller is
1405 * to delete this array using decrRef() as it is no more needed.
1406 * \throw If the two meshes do not match.
1408 * \if ENABLE_EXAMPLES
1409 * \ref cpp_mcumesh_checkDeepEquivalWith "Here is a C++ example".<br>
1410 * \ref py_mcumesh_checkDeepEquivalWith "Here is a Python example".
1413 void MEDCouplingPointSet::checkDeepEquivalWith(const MEDCouplingMesh *other, int cellCompPol, double prec,
1414 DataArrayIdType *&cellCor, DataArrayIdType *&nodeCor) const
1417 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::checkDeepEquivalWith : input is null !");
1418 const MEDCouplingPointSet *otherC=dynamic_cast<const MEDCouplingPointSet *>(other);
1420 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::checkDeepEquivalWith : other is not a PointSet mesh !");
1421 MCAuto<MEDCouplingPointSet> m=dynamic_cast<MEDCouplingPointSet *>(mergeMyselfWith(otherC));
1422 bool areNodesMerged;
1423 mcIdType newNbOfNodes;
1424 mcIdType oldNbOfNodes=getNumberOfNodes();
1425 MCAuto<DataArrayIdType> da=m->buildPermArrayForMergeNode(prec,oldNbOfNodes,areNodesMerged,newNbOfNodes);
1427 if(!areNodesMerged && oldNbOfNodes != 0)
1428 throw INTERP_KERNEL::Exception("checkDeepEquivalWith : Nodes are incompatible ! ");
1429 const mcIdType *pt=std::find_if(da->getConstPointer()+oldNbOfNodes,da->getConstPointer()+da->getNbOfElems(),std::bind(std::greater<mcIdType>(),std::placeholders::_1,oldNbOfNodes-1));
1430 if(pt!=da->getConstPointer()+da->getNbOfElems())
1431 throw INTERP_KERNEL::Exception("checkDeepEquivalWith : some nodes in other are not in this !");
1432 m->renumberNodes(da->getConstPointer(),newNbOfNodes);
1434 MCAuto<DataArrayIdType> nodeCor2=da->subArray(oldNbOfNodes);
1435 da=m->mergeNodes(prec,areNodesMerged,newNbOfNodes);
1437 da=m->zipConnectivityTraducer(cellCompPol);
1438 mcIdType nbCells=ToIdType(getNumberOfCells());
1439 if (nbCells != ToIdType(other->getNumberOfCells()))
1440 throw INTERP_KERNEL::Exception("checkDeepEquivalWith : some cells in other are not in this !");
1441 mcIdType dan(da->getNumberOfTuples());
1444 MCAuto<DataArrayIdType> da1(DataArrayIdType::New()),da2(DataArrayIdType::New());
1445 da1->alloc(dan/2,1); da2->alloc(dan/2,1);
1446 std::copy(da->getConstPointer(), da->getConstPointer()+dan/2, da1->getPointer());
1447 std::copy(da->getConstPointer()+dan/2, da->getConstPointer()+dan, da2->getPointer());
1448 da1->sort(); da2->sort();
1449 if (!da1->isEqualWithoutConsideringStr(*da2))
1450 throw INTERP_KERNEL::Exception("checkDeepEquivalWith : some cells in other are not in this !");
1452 MCAuto<DataArrayIdType> cellCor2=da->selectByTupleIdSafeSlice(nbCells,ToIdType(da->getNbOfElems()),1);
1453 nodeCor=nodeCor2->isIota(nodeCor2->getNumberOfTuples())?0:nodeCor2.retn();
1454 cellCor=cellCor2->isIota(cellCor2->getNumberOfTuples())?0:cellCor2.retn();
1458 * Checks if \a this and \a other meshes are geometrically equivalent, else an
1459 * exception is thrown. The meshes are considered equivalent if (1) they share one
1460 * node coordinates array and (2) they contain the same cells (with use of a specified
1461 * cell comparison technique). The mapping from cells of the \a other to ones of \a this
1462 * is returned via an out parameter.
1464 * If \a cellCor is null (or Py_None) it means that for all #i cell in \a other is equal to cell # i in \a this.
1466 * \param [in] other - the mesh to compare with.
1467 * \param [in] cellCompPol - id [0-2] of cell comparison method. See the meaning of
1468 * each method in description of MEDCouplingPointSet::zipConnectivityTraducer().
1469 * \param [in] prec - a not used parameter.
1470 * \param [out] cellCor - the permutation array in "Old to New" mode. The caller is
1471 * to delete this array using decrRef() as it is no more needed.
1472 * \throw If the two meshes do not match.
1474 * \if ENABLE_EXAMPLES
1475 * \ref cpp_mcumesh_checkDeepEquivalWith "Here is a C++ example".<br>
1476 * \ref py_mcumesh_checkDeepEquivalWith "Here is a Python example".
1479 void MEDCouplingPointSet::checkDeepEquivalOnSameNodesWith(const MEDCouplingMesh *other, int cellCompPol, double prec,
1480 DataArrayIdType *&cellCor) const
1483 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::checkDeepEquivalOnSameNodesWith : input is null !");
1484 const MEDCouplingPointSet *otherC=dynamic_cast<const MEDCouplingPointSet *>(other);
1486 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::checkDeepEquivalOnSameNodesWith : other is not a PointSet mesh !");
1487 if(_coords!=otherC->_coords)
1488 throw INTERP_KERNEL::Exception("checkDeepEquivalOnSameNodesWith : meshes do not share the same coordinates ! Use tryToShareSameCoordinates or call checkDeepEquivalWith !");
1489 MCAuto<MEDCouplingPointSet> m=mergeMyselfWithOnSameCoords(otherC);
1490 MCAuto<DataArrayIdType> da=m->zipConnectivityTraducer(cellCompPol);
1491 mcIdType maxId=*std::max_element(da->getConstPointer(),da->getConstPointer()+getNumberOfCells());
1492 const mcIdType *pt=std::find_if(da->getConstPointer()+getNumberOfCells(),da->getConstPointer()+da->getNbOfElems(),std::bind(std::greater<mcIdType>(),std::placeholders::_1,maxId));
1493 if(pt!=da->getConstPointer()+da->getNbOfElems())
1495 throw INTERP_KERNEL::Exception("checkDeepEquivalOnSameNodesWith : some cells in other are not in this !");
1497 MCAuto<DataArrayIdType> cellCor2=da->selectByTupleIdSafeSlice(ToIdType(getNumberOfCells()),ToIdType(da->getNbOfElems()),1);
1498 cellCor=cellCor2->isIota(cellCor2->getNumberOfTuples())?0:cellCor2.retn();
1501 void MEDCouplingPointSet::checkFastEquivalWith(const MEDCouplingMesh *other, double prec) const
1503 MEDCouplingMesh::checkFastEquivalWith(other,prec);
1504 //other not null checked by the line before
1505 const MEDCouplingPointSet *otherC=dynamic_cast<const MEDCouplingPointSet *>(other);
1507 throw INTERP_KERNEL::Exception("MEDCouplingPointSet::checkFastEquivalWith : fails because other is not a pointset mesh !");
1508 mcIdType nbOfCells=ToIdType(getNumberOfCells());
1512 status&=areCellsFrom2MeshEqual(otherC,0,prec);
1513 status&=areCellsFrom2MeshEqual(otherC,nbOfCells/2,prec);
1514 status&=areCellsFrom2MeshEqual(otherC,nbOfCells-1,prec);
1516 throw INTERP_KERNEL::Exception("checkFastEquivalWith : Two meshes are not equal because on 3 test cells some difference have been detected !");
1520 * Finds cells whose all or some nodes are in a given array of node ids.
1521 * \param [in] begin - the array of node ids.
1522 * \param [in] end - a pointer to the (last+1)-th element of \a begin.
1523 * \param [in] fullyIn - if \c true, then cells whose all nodes are in the
1524 * array \a begin are returned only, else cells whose any node is in the
1525 * array \a begin are returned.
1526 * \return DataArrayIdType * - a new instance of DataArrayIdType holding ids of found
1527 * cells. The caller is to delete this array using decrRef() as it is no more
1529 * \throw If the coordinates array is not set.
1530 * \throw If the nodal connectivity of cells is not defined.
1531 * \throw If any cell id in \a begin is not valid.
1533 * \sa MEDCouplingPointSet::getCellIdsFullyIncludedInNodeIds
1535 * \if ENABLE_EXAMPLES
1536 * \ref cpp_mcumesh_getCellIdsLyingOnNodes "Here is a C++ example".<br>
1537 * \ref py_mcumesh_getCellIdsLyingOnNodes "Here is a Python example".
1540 DataArrayIdType *MEDCouplingPointSet::getCellIdsLyingOnNodes(const mcIdType *begin, const mcIdType *end, bool fullyIn) const
1542 DataArrayIdType *cellIdsKept=0;
1543 fillCellIdsToKeepFromNodeIds(begin,end,fullyIn,cellIdsKept);
1544 cellIdsKept->setName(getName());
1549 * Finds cells whose all nodes are in a given array of node ids.
1550 * This method is a specialization of MEDCouplingPointSet::getCellIdsLyingOnNodes (true
1551 * as last input argument).
1552 * \param [in] partBg - the array of node ids.
1553 * \param [in] partEnd - a pointer to a (last+1)-th element of \a partBg.
1554 * \return DataArrayIdType * - a new instance of DataArrayIdType holding ids of found
1555 * cells. The caller is to delete this array using decrRef() as it is no
1557 * \throw If the coordinates array is not set.
1558 * \throw If the nodal connectivity of cells is not defined.
1559 * \throw If any cell id in \a partBg is not valid.
1561 * \sa MEDCouplingPointSet::getCellIdsLyingOnNodes
1563 * \if ENABLE_EXAMPLES
1564 * \ref cpp_mcumesh_getCellIdsFullyIncludedInNodeIds "Here is a C++ example".<br>
1565 * \ref py_mcumesh_getCellIdsFullyIncludedInNodeIds "Here is a Python example".
1568 DataArrayIdType *MEDCouplingPointSet::getCellIdsFullyIncludedInNodeIds(const mcIdType *partBg, const mcIdType *partEnd) const
1570 return getCellIdsLyingOnNodes(partBg,partEnd,true);
1574 * Removes unused nodes (the node coordinates array is shorten) and returns an array
1575 * mapping between new and old node ids in "Old to New" mode. -1 values in the returned
1576 * array mean that the corresponding old node is no more used.
1577 * \return DataArrayIdType * - a new instance of DataArrayIdType of length \a
1578 * this->getNumberOfNodes() before call of this method. The caller is to
1579 * delete this array using decrRef() as it is no more needed.
1580 * \throw If the coordinates array is not set.
1581 * \throw If the nodal connectivity of cells is not defined.
1582 * \throw If the nodal connectivity includes an invalid id.
1584 * \if ENABLE_EXAMPLES
1585 * \ref cpp_mcumesh_zipCoordsTraducer "Here is a C++ example".<br>
1586 * \ref py_mcumesh_zipCoordsTraducer "Here is a Python example".
1589 DataArrayIdType *MEDCouplingPointSet::zipCoordsTraducer()
1591 mcIdType newNbOfNodes=-1;
1592 MCAuto<DataArrayIdType> traducer=getNodeIdsInUse(newNbOfNodes);
1593 renumberNodes(traducer->getConstPointer(),newNbOfNodes);
1594 return traducer.retn();
1598 * Merges nodes equal within \a precision and returns an array describing the
1599 * permutation used to remove duplicate nodes.
1600 * \param [in] precision - minimal absolute distance between two nodes at which they are
1601 * considered not coincident.
1602 * \param [out] areNodesMerged - is set to \c true if any coincident nodes removed.
1603 * \param [out] newNbOfNodes - number of nodes remaining after the removal.
1604 * \return DataArrayIdType * - the permutation array in "Old to New" mode. For more
1605 * info on "Old to New" mode see \ref numbering. The caller
1606 * is to delete this array using decrRef() as it is no more needed.
1607 * \throw If the coordinates array is not set.
1608 * \throw If the nodal connectivity of cells is not defined.
1610 * \if ENABLE_EXAMPLES
1611 * \ref cpp_mcumesh_mergeNodes "Here is a C++ example".<br>
1612 * \ref py_mcumesh_mergeNodes "Here is a Python example".
1615 DataArrayIdType *MEDCouplingPointSet::mergeNodes(double precision, bool& areNodesMerged, mcIdType& newNbOfNodes)
1617 MCAuto<DataArrayIdType> ret=buildPermArrayForMergeNode(precision,-1,areNodesMerged,newNbOfNodes);
1619 renumberNodes(ret->begin(),newNbOfNodes);
1624 * Merges nodes equal within \a precision and returns an array describing the
1625 * permutation used to remove duplicate nodes. In contrast to mergeNodes(), location
1626 * of merged nodes is changed to be at their barycenter.
1627 * \param [in] precision - minimal absolute distance between two nodes at which they are
1628 * considered not coincident.
1629 * \param [out] areNodesMerged - is set to \c true if any coincident nodes removed.
1630 * \param [out] newNbOfNodes - number of nodes remaining after the removal.
1631 * \return DataArrayIdType * - the permutation array in "Old to New" mode. For more
1632 * info on "Old to New" mode see \ref numbering. The caller
1633 * is to delete this array using decrRef() as it is no more needed.
1634 * \throw If the coordinates array is not set.
1635 * \throw If the nodal connectivity of cells is not defined.
1637 * \if ENABLE_EXAMPLES
1638 * \ref cpp_mcumesh_mergeNodes "Here is a C++ example".<br>
1639 * \ref py_mcumesh_mergeNodes "Here is a Python example".
1642 DataArrayIdType *MEDCouplingPointSet::mergeNodesCenter(double precision, bool& areNodesMerged, mcIdType& newNbOfNodes)
1644 DataArrayIdType *ret=buildPermArrayForMergeNode(precision,-1,areNodesMerged,newNbOfNodes);
1646 renumberNodesCenter(ret->getConstPointer(),newNbOfNodes);