1 <?xml version='1.0' encoding='iso-8859-1' ?>
3 Copyright (C) 2010-2012 EDF R&D
5 This library is free software; you can redistribute it and/or
6 modify it under the terms of the GNU Lesser General Public
7 License as published by the Free Software Foundation; either
8 version 2.1 of the License.
10 This library is distributed in the hope that it will be useful,
11 but WITHOUT ANY WARRANTY; without even the implied warranty of
12 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
13 Lesser General Public License for more details.
15 You should have received a copy of the GNU Lesser General Public
16 License along with this library; if not, write to the Free Software
17 Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
19 See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
21 Author: Jean-Philippe Argaud, jean-philippe.argaud@edf.fr, EDF R&D
25 <objref name="computeAD" id="python:computeAD:1.0">
29 <!-- Types for parametric computations -->
30 <!-- TODO On devrait pouvoir le lire depuis le KERNEL !!!-->
31 <type name="long" kind="int"/>
32 <struct name="SALOME_TYPES/Parameter">
33 <member type="string" name="name"></member>
34 <member type="string" name="value"></member>
36 <sequence content="SALOME_TYPES/Parameter" name="SALOME_TYPES/ParameterList"></sequence>
37 <sequence content="double" name="SALOME_TYPES/Variable"></sequence>
38 <sequence content="SALOME_TYPES/Variable" name="SALOME_TYPES/VariableSequence"></sequence>
39 <sequence content="SALOME_TYPES/VariableSequence" name="SALOME_TYPES/StateSequence"></sequence>
40 <sequence content="SALOME_TYPES/StateSequence" name="SALOME_TYPES/TimeSequence"></sequence>
41 <sequence content="string" name="SALOME_TYPES/VarList"></sequence>
42 <struct name="SALOME_TYPES/ParametricInput">
43 <member type="SALOME_TYPES/VarList" name="inputVarList"></member>
44 <member type="SALOME_TYPES/VarList" name="outputVarList"></member>
45 <member type="SALOME_TYPES/TimeSequence" name="inputValues"></member>
46 <member type="SALOME_TYPES/ParameterList" name="specificParameters"></member>
48 <struct name="SALOME_TYPES/ParametricOutput">
49 <member type="SALOME_TYPES/TimeSequence" name="outputValues"></member>
50 <member type="SALOME_TYPES/ParameterList" name="specificOutputInfos"></member>
51 <member type="long" name="returnCode"></member>
52 <member type="string" name="errorMessage"></member>
56 <inline name="CreateAssimilationStudy">
61 logging.debug("CREATE Entering in CreateAssimilationStudy")
62 print "Entering in the assimilation study"
63 print "Name is set to........:", Name
64 print "Algorithm is set to...:", Algorithm
65 print "Debug is set to.......:", Debug
67 # Create Assimilation study
68 from daYacsIntegration.daStudy import *
69 assim_study = daStudy(Name, Algorithm, Debug)
71 # Algorithm parameters
77 assim_study.setAlgorithmParameters(AlgorithmParameters)
79 logging.debug("CREATE Data entered are:")
87 logging.debug("CREATE Background is set")
88 logging.debug("CREATE BackgroundType is %s"%BackgroundType)
89 logging.debug("CREATE BackgroundStored is %s"%BackgroundStored)
90 assim_study.setBackgroundType(BackgroundType)
91 assim_study.setBackgroundStored(BackgroundStored)
92 assim_study.setBackground(Background)
100 logging.debug("CREATE CheckingPoint is set")
101 logging.debug("CREATE CheckingPointType is %s"%CheckingPointType)
102 logging.debug("CREATE CheckingPointStored is %s"%CheckingPointStored)
103 assim_study.setCheckingPointType(CheckingPointType)
104 assim_study.setCheckingPointStored(CheckingPointStored)
105 assim_study.setCheckingPoint(CheckingPoint)
113 logging.debug("CREATE BackgroundError is set")
114 logging.debug("CREATE BackgroundErrorStored is %s"%BackgroundErrorStored)
115 assim_study.setBackgroundErrorStored(BackgroundErrorStored)
116 assim_study.setBackgroundError(BackgroundError)
124 logging.debug("CREATE Observation is set")
125 logging.debug("CREATE ObservationType is %s"%ObservationType)
126 logging.debug("CREATE ObservationStored is %s"%ObservationStored)
127 assim_study.setObservationType(ObservationType)
128 assim_study.setObservationStored(ObservationStored)
129 assim_study.setObservation(Observation)
137 logging.debug("CREATE ObservationError is set")
138 logging.debug("CREATE ObservationErrorStored is %s"%ObservationErrorStored)
139 assim_study.setObservationErrorStored(ObservationErrorStored)
140 assim_study.setObservationError(ObservationError)
148 logging.debug("CREATE EvolutionError is set")
149 logging.debug("CREATE EvolutionErrorStored is %s"%EvolutionErrorStored)
150 assim_study.setEvolutionErrorStored(EvolutionErrorStored)
151 assim_study.setEvolutionError(EvolutionError)
153 # ObservationOperator
154 ObservationOperatorOk = 0
160 logging.debug("CREATE ObservationOperator is set")
161 logging.debug("CREATE ObservationOperatorType is %s"%ObservationOperatorType)
162 assim_study.setObservationOperatorType("Matrix", ObservationOperatorType)
163 assim_study.setObservationOperator("Matrix", ObservationOperator)
164 ObservationOperatorOk = 1
166 if ObservationOperatorOk == 0:
168 ObservationOperatorDirect
172 logging.debug("CREATE ObservationOperatorDirect is %s"%ObservationOperatorDirect)
173 assim_study.setObservationOperatorType("Direct", "Function")
174 assim_study.setObservationOperator("Direct", ObservationOperatorDirect)
176 ObservationOperatorTangent
180 logging.debug("CREATE ObservationOperatorTangent is %s"%ObservationOperatorTangent)
181 assim_study.setObservationOperatorType("Tangent", "Function")
182 assim_study.setObservationOperator("Tangent", ObservationOperatorTangent)
184 ObservationOperatorAdjoint
188 logging.debug("CREATE ObservationOperatorAdjoint is %s"%ObservationOperatorAdjoint)
189 assim_study.setObservationOperatorType("Adjoint", "Function")
190 assim_study.setObservationOperator("Adjoint", ObservationOperatorAdjoint)
199 logging.debug("CREATE EvolutionModel is set")
200 logging.debug("CREATE EvolutionModelType is %s"%EvolutionModelType)
201 assim_study.setEvolutionModelType("Matrix", EvolutionModelType)
202 assim_study.setEvolutionModel("Matrix", EvolutionModel)
205 if EvolutionModelOk == 0:
211 logging.debug("CREATE EvolutionModelDirect is %s"%EvolutionModelDirect)
212 assim_study.setEvolutionModelType("Direct", "Function")
213 assim_study.setEvolutionModel("Direct", EvolutionModelDirect)
215 EvolutionModelTangent
219 logging.debug("CREATE EvolutionModelTangent is %s"%EvolutionModelTangent)
220 assim_study.setEvolutionModelType("Tangent", "Function")
221 assim_study.setEvolutionModel("Tangent", EvolutionModelTangent)
223 EvolutionModelAdjoint
227 logging.debug("CREATE EvolutionModelAdjoint is %s"%EvolutionModelAdjoint)
228 assim_study.setEvolutionModelType("Adjoint", "Function")
229 assim_study.setEvolutionModel("Adjoint", EvolutionModelAdjoint)
232 for name, size in zip(InputVariablesNames, InputVariablesSizes):
233 assim_study.setInputVariable(name, size)
234 for name, size in zip(OutputVariablesNames, OutputVariablesSizes):
235 assim_study.setOutputVariable(name, size)
238 logging.debug("CREATE Observers keys are %s"%observers.keys())
239 # Adding observers to the study
240 for observer_name in observers.keys():
243 number = str(observers[observer_name]["number"])
244 if "scheduler" in observers[observer_name].keys():
245 scheduler = observers[observer_name]["scheduler"]
246 if "info" in observers[observer_name].keys():
247 info = observers[observer_name]["info"]
248 assim_study.addObserver(observer_name, scheduler, info, number)
253 <inport name="Name" type="string"/>
254 <inport name="Algorithm" type="string"/>
255 <inport name="Debug" type="bool"/>
256 <inport name="InputVariablesNames" type="stringvec"/>
257 <inport name="InputVariablesSizes" type="intvec"/>
258 <inport name="OutputVariablesNames" type="stringvec"/>
259 <inport name="OutputVariablesSizes" type="intvec"/>
260 <inport name="has_observers" type="bool"/>
261 <inport name="observers" type="pyobj"/>
262 <outport name="Study" type="pyobj"/>
265 <inline name="CreateNumpyMatrixFromString">
266 <script><code><![CDATA[
267 import numpy, logging
268 logging.debug("CREATE Entering in CreateNumpyMatrixFromString")
269 matrix = numpy.matrix(matrix_in_string)
271 logging.debug("CREATE Matrix is %s"%matrix)
273 <inport name="matrix_in_string" type="string"/>
274 <outport name="matrix" type="pyobj"/>
275 <outport name="type" type="string"/>
276 <outport name="stored" type="bool"/>
279 <inline name="CreateNumpyMatrixFromScript">
280 <script><code><![CDATA[
282 logging.debug("CREATE Entering in CreateNumpyMatrixFromScript")
285 # Get file path and filename
288 filepath = os.path.dirname(script)
289 filename = os.path.basename(script)
290 module_name = os.path.splitext(filename)[0]
291 if sys.path.count(filepath)==0 or (sys.path.count(filepath)>0 and sys.path.index(filepath,0,1)>0):
292 sys.path.insert(0,filepath)
295 __import__(module_name)
296 user_script_module = sys.modules[module_name]
298 # Get Data from script
300 <inport name="script" type="string"/>
301 <outport name="type" type="string"/>
302 <outport name="stored" type="bool"/>
305 <inline name="CreateNumpyVectorFromString">
306 <script><code><![CDATA[
307 import numpy, logging
308 logging.debug("CREATE Entering in CreateNumpyVectorFromString")
309 vector = numpy.matrix(vector_in_string)
311 logging.debug("Vector is %s"%vector)
313 <inport name="vector_in_string" type="string"/>
314 <outport name="vector" type="pyobj"/>
315 <outport name="type" type="string"/>
316 <outport name="stored" type="bool"/>
319 <inline name="CreateNumpyVectorFromScript">
320 <script><code><![CDATA[
322 logging.debug("CREATE Entering in CreateNumpyVectorFromScript")
325 # Get file path and filename
328 filepath = os.path.dirname(script)
329 filename = os.path.basename(script)
330 module_name = os.path.splitext(filename)[0]
331 if sys.path.count(filepath)==0 or (sys.path.count(filepath)>0 and sys.path.index(filepath,0,1)>0):
332 sys.path.insert(0,filepath)
335 __import__(module_name)
336 user_script_module = sys.modules[module_name]
338 # Get Data from script
340 <inport name="script" type="string"/>
341 <outport name="type" type="string"/>
342 <outport name="stored" type="bool"/>
345 <inline name="CreateNumpyVectorSerieFromString">
346 <script><code><![CDATA[
347 import numpy, logging
348 logging.debug("CREATE Entering in CreateNumpyVectorSerieFromString")
349 vector = numpy.matrix(vector_in_string)
351 logging.debug("VectorSerie is %s"%vector)
353 <inport name="vector_in_string" type="string"/>
354 <outport name="vector" type="pyobj"/>
355 <outport name="type" type="string"/>
356 <outport name="stored" type="bool"/>
359 <inline name="CreateNumpyVectorSerieFromScript">
360 <script><code><![CDATA[
362 logging.debug("CREATE Entering in CreateNumpyVectorSerieFromScript")
365 # Get file path and filename
368 filepath = os.path.dirname(script)
369 filename = os.path.basename(script)
370 module_name = os.path.splitext(filename)[0]
371 if sys.path.count(filepath)==0 or (sys.path.count(filepath)>0 and sys.path.index(filepath,0,1)>0):
372 sys.path.insert(0,filepath)
375 __import__(module_name)
376 user_script_module = sys.modules[module_name]
378 # Get Data from script
380 <inport name="script" type="string"/>
381 <outport name="type" type="string"/>
382 <outport name="stored" type="bool"/>
385 <inline name="SimpleExecuteDirectAlgorithm">
386 <script><code><![CDATA[
388 logging.debug("EXECUTE Entering in SimpleExecuteDirectAlgorithm")
389 from daYacsIntegration.daStudy import *
390 ADD = Study.getAssimilationStudy()
393 <inport name="Study" type="pyobj"/>
394 <outport name="Study" type="pyobj"/>
397 <inline name="SimpleUserAnalysis">
398 <script><code><![CDATA[
399 #-*-coding:iso-8859-1-*-
401 logging.debug("TERMINATE Entering in SimpleUserAnalysis")
402 from daYacsIntegration.daStudy import *
403 ADD = Study.getAssimilationStudy()
407 <inport name="Study" type="pyobj"/>
410 <inline name="FakeOptimizerLoopNode">
411 <script><code><![CDATA[
413 logging.debug("EXECUTE Entering in FakeOptimizerLoopNode")
416 <inport name="computation" type="SALOME_TYPES/ParametricInput"/>
417 <outport name="result" type="SALOME_TYPES/ParametricOutput"/>
420 <inline name="CreateDictFromScript">
421 <script><code><![CDATA[
423 logging.debug("CREATE Entering in CreateDictFromScript")
425 # Get file path and filename
428 filepath = os.path.dirname(script)
429 filename = os.path.basename(script)
430 module_name = os.path.splitext(filename)[0]
431 if sys.path.count(filepath)==0 or (sys.path.count(filepath)>0 and sys.path.index(filepath,0,1)>0):
432 sys.path.insert(0,filepath)
435 __import__(module_name)
436 user_script_module = sys.modules[module_name]
438 # Get Data from script
440 <inport name="script" type="string"/>
443 <inline name="UserDataInitFromScript">
444 <script><code><![CDATA[
446 logging.debug("CREATE Entering in UserDataInitFromScript")
448 # Get file path and filename
451 filepath = os.path.dirname(script)
452 filename = os.path.basename(script)
453 module_name = os.path.splitext(filename)[0]
454 if sys.path.count(filepath)==0 or (sys.path.count(filepath)>0 and sys.path.index(filepath,0,1)>0):
455 sys.path.insert(0,filepath)
458 __import__(module_name)
459 user_script_module = sys.modules[module_name]
461 # Get Data from script
463 <inport name="script" type="string"/>
464 <outport name="init_data" type="pyobj"/>
467 <inline name="ReadForSwitchNode">
468 <script><code><![CDATA[
470 logging.debug("CREATE Entering in ReadForSwitchNode")
471 logging.debug(" with input data : "+str(data["specificParameters"]))
473 for param in data["specificParameters"]:
474 if param["name"] == "switch_value":
475 switch_value = int(param["value"])
476 logging.debug(" switching to value : "+str(switch_value))
478 <inport name="data" type="SALOME_TYPES/ParametricInput"/>
479 <outport name="data" type="SALOME_TYPES/ParametricInput"/>
480 <outport name="switch_value" type="int"/>
483 <inline name="ExtractDataNode">
484 <script><code><![CDATA[
486 logging.debug("TERMINATE Entering in ExtractDataNode")
488 from daCore.AssimilationStudy import AssimilationStudy
491 for param in data["specificParameters"]:
492 if param["name"] == "var":
493 var = cPickle.loads(param["value"])
494 if param["name"] == "info":
495 info = param["value"]
497 <inport name="data" type="SALOME_TYPES/ParametricInput"/>
498 <outport name="var" type="pyobj"/>
499 <outport name="info" type="pyobj"/>
502 <inline name="ObservationNodeString">
503 <script><code><![CDATA[
504 #print "Entering in Observation"
507 <inport name="var" type="pyobj"/>
508 <inport name="info" type="pyobj"/>
511 <inline name="ObservationNodeFile">
512 <script><code><![CDATA[
513 #print "Entering in Observation"
517 <inport name="var" type="pyobj"/>
518 <inport name="info" type="pyobj"/>
519 <inport name="script" type="string"/>
522 <inline name="EndObservationNode">
523 <script><code><![CDATA[
524 # Create a fake output object.
525 # An observer is always successful.
527 output["outputValues"] = [[[[]]]]
528 output["specificOutputInfos"] = []
529 output["returnCode"] = 0
530 output["errorMessage"] = ""
532 <outport name="output" type="SALOME_TYPES/ParametricOutput"/>
535 <inline name="SetObserversNode">
536 <script><code><![CDATA[
537 #print "Setting observers"
539 <outport name="has_observers" type="bool"/>
540 <outport name="observers" type="pyobj"/>