resources/ADAOSchemaCatalog.xml

   1 <?xml version='1.0' encoding='iso-8859-1' ?>
   2 <proc>
   3
   4   <objref name="computeAD" id="python:computeAD:1.0">
   5     <base>pyobj</base>
   6   </objref>
   7
   8   <inline name="CreateAssimilationStudy">
   9     <script><code>
  10
  11 <![CDATA[
  12 import numpy
  13 print "Entering in CreateAssimilationStudy"
  14 print "Name is", Name
  15 print "Algorithm is", Algorithm
  16
  17 # Create Assimilation study
  18 from daYacsIntegration.daStudy import *
  19 assim_study = daStudy(Name, Algorithm)
  20
  21 # Data
  22 print "Data entered are:"
  23 # Background
  24 try:
  25   Background
  26 except NameError:
  27   pass
  28 else:
  29   #print "Background is", Background
  30   #print "BackgroundType is", BackgroundType
  31   assim_study.setBackgroundType(BackgroundType)
  32   assim_study.setBackground(Background)
  33
  34 # BackgroundError
  35 try:
  36   BackgroundError
  37 except NameError:
  38   pass
  39 else:
  40   #print "BackgroundError is", BackgroundError
  41   #print "BackgroundErrorType is", BackgroundErrorType
  42   assim_study.setBackgroundError(BackgroundError)
  43
  44 # Observation
  45 try:
  46   Observation
  47 except NameError:
  48   pass
  49 else:
  50   #print "Observation is", Observation
  51   #print "ObservationType is", ObservationType
  52   assim_study.setObservationType(ObservationType)
  53   assim_study.setObservation(Observation)
  54
  55 # ObservationError
  56 try:
  57   ObservationError
  58 except NameError:
  59   pass
  60 else:
  61   #print "ObservationError is", ObservationError
  62   #print "ObservationErrorType is", ObservationErrorType
  63   assim_study.setObservationError(ObservationError)
  64
  65 # ObservationOperator
  66 ObservationOperatorOk = 0
  67 try:
  68   ObservationOperator
  69 except NameError:
  70   pass
  71 else:
  72   #print "ObservationOperator is", ObservationOperator
  73   #print "ObservationOperatorType is", ObservationOperatorType
  74   assim_study.setObservationOperatorType("Matrix", ObservationOperatorType)
  75   assim_study.setObservationOperator("Matrix", ObservationOperator)
  76   ObservationOperatorOk = 1
  77
  78 if ObservationOperatorOk == 0:
  79   try:
  80     ObservationOperatorDirect
  81   except NameError:
  82     pass
  83   else:
  84     #print "ObservationOperatorDirect is", ObservationOperatorDirect
  85     assim_study.setObservationOperatorType("Direct", "Function")
  86     assim_study.setObservationOperator("Direct", ObservationOperatorDirect)
  87   try:
  88     ObservationOperatorTangent
  89   except NameError:
  90     pass
  91   else:
  92     #print "ObservationOperatorTangent is", ObservationOperatorTangent
  93     assim_study.setObservationOperatorType("Tangent", "Function")
  94     assim_study.setObservationOperator("Tangent", ObservationOperatorTangent)
  95   try:
  96     ObservationOperatorAdjoint
  97   except NameError:
  98     pass
  99   else:
 100     #print "ObservationOperatorAdjoint is", ObservationOperatorAdjoint
 101     assim_study.setObservationOperatorType("Adjoint", "Function")
 102     assim_study.setObservationOperator("Adjoint", ObservationOperatorAdjoint)
 103
 104
 105 Study = assim_study
 106 ]]>
 107
 108 </code></script>
 109     <inport name="Name" type="string"/>
 110     <inport name="Algorithm" type="string"/>
 111     <outport name="Study" type="pyobj"/>
 112   </inline>
 113
 114   <inline name="CreateNumpyMatrixFromString">
 115     <script><code><![CDATA[
 116 print "Entering in CreateNumpyMatrixFromString"
 117 import numpy
 118 matrix = numpy.matrix(matrix_in_string)
 119 type = "Matrix"
 120 print "Matrix is", matrix
 121 ]]></code></script>
 122     <inport name="matrix_in_string" type="string"/>
 123     <outport name="matrix" type="pyobj"/>
 124     <outport name="type" type="string"/>
 125   </inline>
 126
 127   <inline name="CreateNumpyMatrixFromScript">
 128     <script><code><![CDATA[
 129 print "Entering in CreateNumpyMatrixFromScript"
 130 execfile(script)
 131 type = "Matrix"
 132 ]]></code></script>
 133     <inport name="script" type="string"/>
 134     <outport name="type" type="string"/>
 135   </inline>
 136
 137   <inline name="CreateNumpyVectorFromString">
 138     <script><code><![CDATA[
 139 print "Entering in CreateNumpyVectorFromString"
 140 import numpy
 141 vector = numpy.matrix(vector_in_string)
 142 type = "Vector"
 143 print "Vector is", vector
 144 ]]></code></script>
 145     <inport name="vector_in_string" type="string"/>
 146     <outport name="vector" type="pyobj"/>
 147     <outport name="type" type="string"/>
 148   </inline>
 149
 150   <inline name="CreateNumpyVectorFromScript">
 151     <script><code><![CDATA[
 152 print "Entering in CreateNumpyVectorFromScript"
 153 execfile(script)
 154 type = "Vector"
 155 ]]></code></script>
 156     <inport name="script" type="string"/>
 157     <outport name="type" type="string"/>
 158   </inline>
 159
 160   <inline name="SimpleExecuteDirectAlgorithm">
 161     <script><code><![CDATA[
 162 print "Entering in SimpleExecuteDirectAlgorithm"
 163 from daYacsIntegration.daStudy import *
 164 ADD = Study.getAssimilationStudy()
 165 ADD.analyze()
 166 ]]></code></script>
 167     <inport name="Study" type="pyobj"/>
 168     <outport name="Study" type="pyobj"/>
 169   </inline>
 170
 171   <inline name="SimpleUserAnalysis">
 172     <script><code><![CDATA[
 173 #-*-coding:iso-8859-1-*-
 174 print "Entering in SimpleUserAnalysis"
 175 from daYacsIntegration.daStudy import *
 176 ADD = Study.getAssimilationStudy()
 177 # User code is below
 178
 179 ]]></code></script>
 180     <inport name="Study" type="pyobj"/>
 181   </inline>
 182
 183   <inline name="FakeOptimizerLoopNode">
 184     <script><code><![CDATA[
 185 print "Entering in FakeOptimizerLoopNode"
 186 result = None
 187 ]]></code></script>
 188     <inport name="computation" type="pyobj"/>
 189     <outport name="result" type="pyobj"/>
 190   </inline>
 191
 192 </proc>