resources/ADAOSchemaCatalog.xml

   1 <?xml version='1.0' encoding='iso-8859-1' ?>
   2 <proc>
   3
   4   <objref name="computeAD" id="python:computeAD:1.0">
   5     <base>pyobj</base>
   6   </objref>
   7
   8   <inline name="CreateAssimilationStudy">
   9     <script><code>
  10
  11 <![CDATA[
  12 import numpy
  13 print "Entering in CreateAssimilationStudy"
  14 print "Name is", Name
  15 print "Algorithm is", Algorithm
  16 print "Debug is set to", Debug
  17
  18 # Create Assimilation study
  19 from daYacsIntegration.daStudy import *
  20 assim_study = daStudy(Name, Algorithm, Debug)
  21
  22 # Algorithm parameters
  23 try:
  24   AlgorithmParameters
  25 except NameError:
  26   pass
  27 else:
  28   assim_study.setAlgorithmParameters(AlgorithmParameters)
  29
  30 # Data
  31 print "Data entered are:"
  32 # Background
  33 try:
  34   Background
  35 except NameError:
  36   pass
  37 else:
  38   #print "Background is", Background
  39   #print "BackgroundType is", BackgroundType
  40   assim_study.setBackgroundType(BackgroundType)
  41   assim_study.setBackground(Background)
  42
  43 # BackgroundError
  44 try:
  45   BackgroundError
  46 except NameError:
  47   pass
  48 else:
  49   #print "BackgroundError is", BackgroundError
  50   #print "BackgroundErrorType is", BackgroundErrorType
  51   assim_study.setBackgroundError(BackgroundError)
  52
  53 # Observation
  54 try:
  55   Observation
  56 except NameError:
  57   pass
  58 else:
  59   #print "Observation is", Observation
  60   #print "ObservationType is", ObservationType
  61   assim_study.setObservationType(ObservationType)
  62   assim_study.setObservation(Observation)
  63
  64 # ObservationError
  65 try:
  66   ObservationError
  67 except NameError:
  68   pass
  69 else:
  70   #print "ObservationError is", ObservationError
  71   #print "ObservationErrorType is", ObservationErrorType
  72   assim_study.setObservationError(ObservationError)
  73
  74 # ObservationOperator
  75 ObservationOperatorOk = 0
  76 try:
  77   ObservationOperator
  78 except NameError:
  79   pass
  80 else:
  81   #print "ObservationOperator is", ObservationOperator
  82   #print "ObservationOperatorType is", ObservationOperatorType
  83   assim_study.setObservationOperatorType("Matrix", ObservationOperatorType)
  84   assim_study.setObservationOperator("Matrix", ObservationOperator)
  85   ObservationOperatorOk = 1
  86
  87 if ObservationOperatorOk == 0:
  88   try:
  89     ObservationOperatorDirect
  90   except NameError:
  91     pass
  92   else:
  93     #print "ObservationOperatorDirect is", ObservationOperatorDirect
  94     assim_study.setObservationOperatorType("Direct", "Function")
  95     assim_study.setObservationOperator("Direct", ObservationOperatorDirect)
  96   try:
  97     ObservationOperatorTangent
  98   except NameError:
  99     pass
 100   else:
 101     #print "ObservationOperatorTangent is", ObservationOperatorTangent
 102     assim_study.setObservationOperatorType("Tangent", "Function")
 103     assim_study.setObservationOperator("Tangent", ObservationOperatorTangent)
 104   try:
 105     ObservationOperatorAdjoint
 106   except NameError:
 107     pass
 108   else:
 109     #print "ObservationOperatorAdjoint is", ObservationOperatorAdjoint
 110     assim_study.setObservationOperatorType("Adjoint", "Function")
 111     assim_study.setObservationOperator("Adjoint", ObservationOperatorAdjoint)
 112
 113
 114 Study = assim_study
 115 ]]>
 116
 117 </code></script>
 118     <inport name="Name" type="string"/>
 119     <inport name="Algorithm" type="string"/>
 120     <inport name="Debug" type="bool"/>
 121     <outport name="Study" type="pyobj"/>
 122   </inline>
 123
 124   <inline name="CreateNumpyMatrixFromString">
 125     <script><code><![CDATA[
 126 print "Entering in CreateNumpyMatrixFromString"
 127 import numpy
 128 matrix = numpy.matrix(matrix_in_string)
 129 type = "Matrix"
 130 print "Matrix is", matrix
 131 ]]></code></script>
 132     <inport name="matrix_in_string" type="string"/>
 133     <outport name="matrix" type="pyobj"/>
 134     <outport name="type" type="string"/>
 135   </inline>
 136
 137   <inline name="CreateNumpyMatrixFromScript">
 138     <script><code><![CDATA[
 139 print "Entering in CreateNumpyMatrixFromScript"
 140 execfile(script)
 141 type = "Matrix"
 142 ]]></code></script>
 143     <inport name="script" type="string"/>
 144     <outport name="type" type="string"/>
 145   </inline>
 146
 147   <inline name="CreateNumpyVectorFromString">
 148     <script><code><![CDATA[
 149 print "Entering in CreateNumpyVectorFromString"
 150 import numpy
 151 vector = numpy.matrix(vector_in_string)
 152 type = "Vector"
 153 print "Vector is", vector
 154 ]]></code></script>
 155     <inport name="vector_in_string" type="string"/>
 156     <outport name="vector" type="pyobj"/>
 157     <outport name="type" type="string"/>
 158   </inline>
 159
 160   <inline name="CreateNumpyVectorFromScript">
 161     <script><code><![CDATA[
 162 print "Entering in CreateNumpyVectorFromScript"
 163 execfile(script)
 164 type = "Vector"
 165 ]]></code></script>
 166     <inport name="script" type="string"/>
 167     <outport name="type" type="string"/>
 168   </inline>
 169
 170   <inline name="SimpleExecuteDirectAlgorithm">
 171     <script><code><![CDATA[
 172 print "Entering in SimpleExecuteDirectAlgorithm"
 173 from daYacsIntegration.daStudy import *
 174 ADD = Study.getAssimilationStudy()
 175 ADD.analyze()
 176 ]]></code></script>
 177     <inport name="Study" type="pyobj"/>
 178     <outport name="Study" type="pyobj"/>
 179   </inline>
 180
 181   <inline name="SimpleUserAnalysis">
 182     <script><code><![CDATA[
 183 #-*-coding:iso-8859-1-*-
 184 print "Entering in SimpleUserAnalysis"
 185 from daYacsIntegration.daStudy import *
 186 ADD = Study.getAssimilationStudy()
 187 # User code is below
 188
 189 ]]></code></script>
 190     <inport name="Study" type="pyobj"/>
 191   </inline>
 192
 193   <inline name="FakeOptimizerLoopNode">
 194     <script><code><![CDATA[
 195 print "Entering in FakeOptimizerLoopNode"
 196 result = None
 197 ]]></code></script>
 198     <inport name="computation" type="pyobj"/>
 199     <outport name="result" type="pyobj"/>
 200   </inline>
 201
 202   <inline name="CreateDictFromScript">
 203     <script><code><![CDATA[
 204 print "Entering in CreateDictFromScript"
 205 execfile(script)
 206 ]]></code></script>
 207     <inport name="script" type="string"/>
 208   </inline>
 209
 210   <inline name="UserDataInitFromScript">
 211     <script><code><![CDATA[
 212 print "Entering in UserDataInitFromScript"
 213 execfile(script)
 214 ]]></code></script>
 215     <inport name="script" type="string"/>
 216     <outport name="init_data" type="pyobj"/>
 217   </inline>
 218
 219 </proc>