1 <?xml version='1.0' encoding='iso-8859-1' ?>
3 Copyright (C) 2010-2011 EDF R&D
5 This library is free software; you can redistribute it and/or
6 modify it under the terms of the GNU Lesser General Public
7 License as published by the Free Software Foundation; either
8 version 2.1 of the License.
10 This library is distributed in the hope that it will be useful,
11 but WITHOUT ANY WARRANTY; without even the implied warranty of
12 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
13 Lesser General Public License for more details.
15 You should have received a copy of the GNU Lesser General Public
16 License along with this library; if not, write to the Free Software
17 Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
19 See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
21 Author: Andre Ribes, andre.ribes@edf.fr, EDF R&D
25 <objref name="computeAD" id="python:computeAD:1.0">
29 <!-- Types for parametric computations -->
30 <!-- TODO On devrait pouvoir le lire depuis le KERNEL !!!-->
31 <type name="long" kind="int"/>
32 <struct name="SALOME_TYPES/Parameter">
33 <member type="string" name="name"></member>
34 <member type="string" name="value"></member>
36 <sequence content="SALOME_TYPES/Parameter" name="SALOME_TYPES/ParameterList"></sequence>
37 <sequence content="double" name="SALOME_TYPES/Variable"></sequence>
38 <sequence content="SALOME_TYPES/Variable" name="SALOME_TYPES/VariableSequence"></sequence>
39 <sequence content="SALOME_TYPES/VariableSequence" name="SALOME_TYPES/StateSequence"></sequence>
40 <sequence content="SALOME_TYPES/StateSequence" name="SALOME_TYPES/TimeSequence"></sequence>
41 <sequence content="string" name="SALOME_TYPES/VarList"></sequence>
42 <struct name="SALOME_TYPES/ParametricInput">
43 <member type="SALOME_TYPES/VarList" name="inputVarList"></member>
44 <member type="SALOME_TYPES/VarList" name="outputVarList"></member>
45 <member type="SALOME_TYPES/TimeSequence" name="inputValues"></member>
46 <member type="SALOME_TYPES/ParameterList" name="specificParameters"></member>
48 <struct name="SALOME_TYPES/ParametricOutput">
49 <member type="SALOME_TYPES/TimeSequence" name="outputValues"></member>
50 <member type="SALOME_TYPES/ParameterList" name="specificOutputInfos"></member>
51 <member type="long" name="returnCode"></member>
52 <member type="string" name="errorMessage"></member>
56 <inline name="CreateAssimilationStudy">
61 logging.debug("CREATE Entering in CreateAssimilationStudy")
62 print "Entering in the assimilation study"
63 print "Name is set to........:", Name
64 print "Algorithm is set to...:", Algorithm
65 print "Debug is set to.......:", Debug
67 # Create Assimilation study
68 from daYacsIntegration.daStudy import *
69 assim_study = daStudy(Name, Algorithm, Debug)
71 # Algorithm parameters
77 assim_study.setAlgorithmParameters(AlgorithmParameters)
80 # print "Data entered are:"
87 logging.debug("CREATE Background is %s"%Background)
88 logging.debug("CREATE BackgroundType is %s"%BackgroundType)
89 assim_study.setBackgroundType(BackgroundType)
90 assim_study.setBackground(Background)
98 logging.debug("CREATE BackgroundError is %s"%BackgroundError)
99 logging.debug("CREATE BackgroundErrorType is %s"%BackgroundErrorType)
100 assim_study.setBackgroundError(BackgroundError)
108 logging.debug("CREATE Observation is %s"%Observation)
109 logging.debug("CREATE ObservationType is %s"%ObservationType)
110 assim_study.setObservationType(ObservationType)
111 assim_study.setObservation(Observation)
119 logging.debug("CREATE ObservationError is %s"%ObservationError)
120 logging.debug("CREATE ObservationErrorType is %s"%ObservationErrorType)
121 assim_study.setObservationError(ObservationError)
123 # ObservationOperator
124 ObservationOperatorOk = 0
130 logging.debug("CREATE ObservationOperator is %s"%ObservationOperator)
131 logging.debug("CREATE ObservationOperatorType is %s"%ObservationOperatorType)
132 assim_study.setObservationOperatorType("Matrix", ObservationOperatorType)
133 assim_study.setObservationOperator("Matrix", ObservationOperator)
134 ObservationOperatorOk = 1
136 if ObservationOperatorOk == 0:
138 ObservationOperatorDirect
142 logging.debug("CREATE ObservationOperatorDirect is %s"%ObservationOperatorDirect)
143 assim_study.setObservationOperatorType("Direct", "Function")
144 assim_study.setObservationOperator("Direct", ObservationOperatorDirect)
146 ObservationOperatorTangent
150 logging.debug("CREATE ObservationOperatorTangent is %s"%ObservationOperatorTangent)
151 assim_study.setObservationOperatorType("Tangent", "Function")
152 assim_study.setObservationOperator("Tangent", ObservationOperatorTangent)
154 ObservationOperatorAdjoint
158 logging.debug("CREATE ObservationOperatorAdjoint is %s"%ObservationOperatorAdjoint)
159 assim_study.setObservationOperatorType("Adjoint", "Function")
160 assim_study.setObservationOperator("Adjoint", ObservationOperatorAdjoint)
163 for name, size in zip(InputVariablesNames, InputVariablesSizes):
164 assim_study.setInputVariable(name, size)
165 for name, size in zip(OutputVariablesNames, OutputVariablesSizes):
166 assim_study.setOutputVariable(name, size)
169 logging.debug("CREATE Observers is %s"%observers.keys())
170 # Adding observers to the study
171 for observer_name in observers.keys():
174 number = str(observers[observer_name]["number"])
175 if "scheduler" in observers[observer_name].keys():
176 scheduler = observers[observer_name]["scheduler"]
177 if "info" in observers[observer_name].keys():
178 info = observers[observer_name]["info"]
179 assim_study.addObserver(observer_name, scheduler, info, number)
184 <inport name="Name" type="string"/>
185 <inport name="Algorithm" type="string"/>
186 <inport name="Debug" type="bool"/>
187 <inport name="InputVariablesNames" type="stringvec"/>
188 <inport name="InputVariablesSizes" type="intvec"/>
189 <inport name="OutputVariablesNames" type="stringvec"/>
190 <inport name="OutputVariablesSizes" type="intvec"/>
191 <inport name="has_observers" type="bool"/>
192 <inport name="observers" type="pyobj"/>
193 <outport name="Study" type="pyobj"/>
196 <inline name="CreateNumpyMatrixFromString">
197 <script><code><![CDATA[
198 import numpy, logging
199 logging.debug("CREATE Entering in CreateNumpyMatrixFromString")
200 matrix = numpy.matrix(matrix_in_string)
202 logging.debug("CREATE Matrix is %s"%matrix)
204 <inport name="matrix_in_string" type="string"/>
205 <outport name="matrix" type="pyobj"/>
206 <outport name="type" type="string"/>
209 <inline name="CreateNumpyMatrixFromScript">
210 <script><code><![CDATA[
212 logging.debug("CREATE Entering in CreateNumpyMatrixFromScript")
215 # Get file path and filename
218 filepath = os.path.dirname(script)
219 filename = os.path.basename(script)
220 module_name = os.path.splitext(filename)[0]
221 sys.path.insert(0,filepath)
224 __import__(module_name)
225 user_script_module = sys.modules[module_name]
227 # Get Data from script
229 <inport name="script" type="string"/>
230 <outport name="type" type="string"/>
233 <inline name="CreateNumpyVectorFromString">
234 <script><code><![CDATA[
235 import numpy, logging
236 logging.debug("CREATE Entering in CreateNumpyVectorFromString")
237 vector = numpy.matrix(vector_in_string)
239 logging.debug("Vector is %s"%vector)
241 <inport name="vector_in_string" type="string"/>
242 <outport name="vector" type="pyobj"/>
243 <outport name="type" type="string"/>
246 <inline name="CreateNumpyVectorFromScript">
247 <script><code><![CDATA[
249 logging.debug("CREATE Entering in CreateNumpyVectorFromScript")
252 # Get file path and filename
255 filepath = os.path.dirname(script)
256 filename = os.path.basename(script)
257 module_name = os.path.splitext(filename)[0]
258 sys.path.insert(0,filepath)
261 __import__(module_name)
262 user_script_module = sys.modules[module_name]
264 # Get Data from script
266 <inport name="script" type="string"/>
267 <outport name="type" type="string"/>
270 <inline name="SimpleExecuteDirectAlgorithm">
271 <script><code><![CDATA[
273 logging.debug("EXECUTE Entering in SimpleExecuteDirectAlgorithm")
274 from daYacsIntegration.daStudy import *
275 ADD = Study.getAssimilationStudy()
278 <inport name="Study" type="pyobj"/>
279 <outport name="Study" type="pyobj"/>
282 <inline name="SimpleUserAnalysis">
283 <script><code><![CDATA[
284 #-*-coding:iso-8859-1-*-
286 logging.debug("TERMINATE Entering in SimpleUserAnalysis")
287 from daYacsIntegration.daStudy import *
288 ADD = Study.getAssimilationStudy()
292 <inport name="Study" type="pyobj"/>
295 <inline name="FakeOptimizerLoopNode">
296 <script><code><![CDATA[
298 logging.debug("EXECUTE Entering in FakeOptimizerLoopNode")
301 <inport name="computation" type="SALOME_TYPES/ParametricInput"/>
302 <outport name="result" type="SALOME_TYPES/ParametricOutput"/>
305 <inline name="CreateDictFromScript">
306 <script><code><![CDATA[
308 logging.debug("CREATE Entering in CreateDictFromScript")
310 # Get file path and filename
313 filepath = os.path.dirname(script)
314 filename = os.path.basename(script)
315 module_name = os.path.splitext(filename)[0]
316 sys.path.insert(0,filepath)
319 __import__(module_name)
320 user_script_module = sys.modules[module_name]
322 # Get Data from script
324 <inport name="script" type="string"/>
327 <inline name="UserDataInitFromScript">
328 <script><code><![CDATA[
330 logging.debug("CREATE Entering in UserDataInitFromScript")
332 # Get file path and filename
335 filepath = os.path.dirname(script)
336 filename = os.path.basename(script)
337 module_name = os.path.splitext(filename)[0]
338 sys.path.insert(0,filepath)
341 __import__(module_name)
342 user_script_module = sys.modules[module_name]
344 # Get Data from script
346 <inport name="script" type="string"/>
347 <outport name="init_data" type="pyobj"/>
350 <inline name="ReadForSwitchNode">
351 <script><code><![CDATA[
353 logging.debug("CREATE Entering in ReadForSwitchNode")
355 for param in data["specificParameters"]:
356 if param["name"] == "switch_value":
357 switch_value = int(param["value"])
359 <inport name="data" type="SALOME_TYPES/ParametricInput"/>
360 <outport name="data" type="SALOME_TYPES/ParametricInput"/>
361 <outport name="switch_value" type="int"/>
364 <inline name="ExtractDataNode">
365 <script><code><![CDATA[
367 logging.debug("TERMINATE Entering in ExtractDataNode")
369 from daCore.AssimilationStudy import AssimilationStudy
372 for param in data["specificParameters"]:
373 if param["name"] == "var":
374 var = pickle.loads(param["value"])
375 if param["name"] == "info":
376 info = param["value"]
378 <inport name="data" type="SALOME_TYPES/ParametricInput"/>
379 <outport name="var" type="pyobj"/>
380 <outport name="info" type="pyobj"/>
383 <inline name="ObservationNodeString">
384 <script><code><![CDATA[
385 #print "Entering in Observation"
388 <inport name="var" type="pyobj"/>
389 <inport name="info" type="pyobj"/>
392 <inline name="ObservationNodeFile">
393 <script><code><![CDATA[
394 #print "Entering in Observation"
398 <inport name="var" type="pyobj"/>
399 <inport name="info" type="pyobj"/>
400 <inport name="script" type="string"/>
403 <inline name="EndObservationNode">
404 <script><code><![CDATA[
405 # Create a fake output object.
406 # An observer is always successful.
408 output["outputValues"] = [[[[]]]]
409 output["specificOutputInfos"] = []
410 output["returnCode"] = 0
411 output["errorMessage"] = ""
413 <outport name="output" type="SALOME_TYPES/ParametricOutput"/>
416 <inline name="SetObserversNode">
417 <script><code><![CDATA[
418 #print "Setting observers"
420 <outport name="has_observers" type="bool"/>
421 <outport name="observers" type="pyobj"/>