resources/ADAOSchemaCatalog.xml

   1 <?xml version='1.0' encoding='iso-8859-1' ?>
   2 <proc>
   3
   4   <objref name="computeAD" id="python:computeAD:1.0">
   5     <base>pyobj</base>
   6   </objref>
   7
   8   <inline name="CreateAssimilationStudy">
   9     <script><code>
  10
  11 <![CDATA[
  12 import numpy
  13 print "Entering in CreateAssimilationStudy"
  14 print "Name is", Name
  15 print "Algorithm is", Algorithm
  16
  17 # Create Assimilation study
  18 from daYacsIntegration.daStudy import *
  19 assim_study = daStudy(Name, Algorithm)
  20
  21 # Algorithm parameters
  22 try:
  23   AlgorithmParameters
  24 except NameError:
  25   pass
  26 else:
  27   assim_study.setAlgorithmParameters(AlgorithmParameters)
  28
  29 # Data
  30 print "Data entered are:"
  31 # Background
  32 try:
  33   Background
  34 except NameError:
  35   pass
  36 else:
  37   #print "Background is", Background
  38   #print "BackgroundType is", BackgroundType
  39   assim_study.setBackgroundType(BackgroundType)
  40   assim_study.setBackground(Background)
  41
  42 # BackgroundError
  43 try:
  44   BackgroundError
  45 except NameError:
  46   pass
  47 else:
  48   #print "BackgroundError is", BackgroundError
  49   #print "BackgroundErrorType is", BackgroundErrorType
  50   assim_study.setBackgroundError(BackgroundError)
  51
  52 # Observation
  53 try:
  54   Observation
  55 except NameError:
  56   pass
  57 else:
  58   #print "Observation is", Observation
  59   #print "ObservationType is", ObservationType
  60   assim_study.setObservationType(ObservationType)
  61   assim_study.setObservation(Observation)
  62
  63 # ObservationError
  64 try:
  65   ObservationError
  66 except NameError:
  67   pass
  68 else:
  69   #print "ObservationError is", ObservationError
  70   #print "ObservationErrorType is", ObservationErrorType
  71   assim_study.setObservationError(ObservationError)
  72
  73 # ObservationOperator
  74 ObservationOperatorOk = 0
  75 try:
  76   ObservationOperator
  77 except NameError:
  78   pass
  79 else:
  80   #print "ObservationOperator is", ObservationOperator
  81   #print "ObservationOperatorType is", ObservationOperatorType
  82   assim_study.setObservationOperatorType("Matrix", ObservationOperatorType)
  83   assim_study.setObservationOperator("Matrix", ObservationOperator)
  84   ObservationOperatorOk = 1
  85
  86 if ObservationOperatorOk == 0:
  87   try:
  88     ObservationOperatorDirect
  89   except NameError:
  90     pass
  91   else:
  92     #print "ObservationOperatorDirect is", ObservationOperatorDirect
  93     assim_study.setObservationOperatorType("Direct", "Function")
  94     assim_study.setObservationOperator("Direct", ObservationOperatorDirect)
  95   try:
  96     ObservationOperatorTangent
  97   except NameError:
  98     pass
  99   else:
 100     #print "ObservationOperatorTangent is", ObservationOperatorTangent
 101     assim_study.setObservationOperatorType("Tangent", "Function")
 102     assim_study.setObservationOperator("Tangent", ObservationOperatorTangent)
 103   try:
 104     ObservationOperatorAdjoint
 105   except NameError:
 106     pass
 107   else:
 108     #print "ObservationOperatorAdjoint is", ObservationOperatorAdjoint
 109     assim_study.setObservationOperatorType("Adjoint", "Function")
 110     assim_study.setObservationOperator("Adjoint", ObservationOperatorAdjoint)
 111
 112
 113 Study = assim_study
 114 ]]>
 115
 116 </code></script>
 117     <inport name="Name" type="string"/>
 118     <inport name="Algorithm" type="string"/>
 119     <outport name="Study" type="pyobj"/>
 120   </inline>
 121
 122   <inline name="CreateNumpyMatrixFromString">
 123     <script><code><![CDATA[
 124 print "Entering in CreateNumpyMatrixFromString"
 125 import numpy
 126 matrix = numpy.matrix(matrix_in_string)
 127 type = "Matrix"
 128 print "Matrix is", matrix
 129 ]]></code></script>
 130     <inport name="matrix_in_string" type="string"/>
 131     <outport name="matrix" type="pyobj"/>
 132     <outport name="type" type="string"/>
 133   </inline>
 134
 135   <inline name="CreateNumpyMatrixFromScript">
 136     <script><code><![CDATA[
 137 print "Entering in CreateNumpyMatrixFromScript"
 138 execfile(script)
 139 type = "Matrix"
 140 ]]></code></script>
 141     <inport name="script" type="string"/>
 142     <outport name="type" type="string"/>
 143   </inline>
 144
 145   <inline name="CreateNumpyVectorFromString">
 146     <script><code><![CDATA[
 147 print "Entering in CreateNumpyVectorFromString"
 148 import numpy
 149 vector = numpy.matrix(vector_in_string)
 150 type = "Vector"
 151 print "Vector is", vector
 152 ]]></code></script>
 153     <inport name="vector_in_string" type="string"/>
 154     <outport name="vector" type="pyobj"/>
 155     <outport name="type" type="string"/>
 156   </inline>
 157
 158   <inline name="CreateNumpyVectorFromScript">
 159     <script><code><![CDATA[
 160 print "Entering in CreateNumpyVectorFromScript"
 161 execfile(script)
 162 type = "Vector"
 163 ]]></code></script>
 164     <inport name="script" type="string"/>
 165     <outport name="type" type="string"/>
 166   </inline>
 167
 168   <inline name="SimpleExecuteDirectAlgorithm">
 169     <script><code><![CDATA[
 170 print "Entering in SimpleExecuteDirectAlgorithm"
 171 from daYacsIntegration.daStudy import *
 172 ADD = Study.getAssimilationStudy()
 173 ADD.analyze()
 174 ]]></code></script>
 175     <inport name="Study" type="pyobj"/>
 176     <outport name="Study" type="pyobj"/>
 177   </inline>
 178
 179   <inline name="SimpleUserAnalysis">
 180     <script><code><![CDATA[
 181 #-*-coding:iso-8859-1-*-
 182 print "Entering in SimpleUserAnalysis"
 183 from daYacsIntegration.daStudy import *
 184 ADD = Study.getAssimilationStudy()
 185 # User code is below
 186
 187 ]]></code></script>
 188     <inport name="Study" type="pyobj"/>
 189   </inline>
 190
 191   <inline name="FakeOptimizerLoopNode">
 192     <script><code><![CDATA[
 193 print "Entering in FakeOptimizerLoopNode"
 194 result = None
 195 ]]></code></script>
 196     <inport name="computation" type="pyobj"/>
 197     <outport name="result" type="pyobj"/>
 198   </inline>
 199
 200   <inline name="CreateDictFromScript">
 201     <script><code><![CDATA[
 202 print "Entering in CreateDictFromScript"
 203 execfile(script)
 204 ]]></code></script>
 205     <inport name="script" type="string"/>
 206   </inline>
 207
 208   <inline name="InitUserDataFromScript">
 209     <script><code><![CDATA[
 210 print "Entering in InitUserDataFromScript"
 211 execfile(script)
 212 ]]></code></script>
 213     <inport name="script" type="string"/>
 214     <outport name="init_data" type="pyobj"/>
 215   </inline>
 216
 217 </proc>