1 <?xml version='1.0' encoding='iso-8859-1' ?>
3 Copyright (C) 2010-2011 EDF R&D
5 This library is free software; you can redistribute it and/or
6 modify it under the terms of the GNU Lesser General Public
7 License as published by the Free Software Foundation; either
8 version 2.1 of the License.
10 This library is distributed in the hope that it will be useful,
11 but WITHOUT ANY WARRANTY; without even the implied warranty of
12 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
13 Lesser General Public License for more details.
15 You should have received a copy of the GNU Lesser General Public
16 License along with this library; if not, write to the Free Software
17 Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
19 See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
21 Author: Andre Ribes, andre.ribes@edf.fr, EDF R&D
25 <objref name="computeAD" id="python:computeAD:1.0">
29 <!-- Types for parametric computations -->
30 <!-- TODO On devrait pouvoir le lire depuis le KERNEL !!!-->
31 <type name="long" kind="int"/>
32 <struct name="SALOME_TYPES/Parameter">
33 <member type="string" name="name"></member>
34 <member type="string" name="value"></member>
36 <sequence content="SALOME_TYPES/Parameter" name="SALOME_TYPES/ParameterList"></sequence>
37 <sequence content="double" name="SALOME_TYPES/Variable"></sequence>
38 <sequence content="SALOME_TYPES/Variable" name="SALOME_TYPES/VariableSequence"></sequence>
39 <sequence content="SALOME_TYPES/VariableSequence" name="SALOME_TYPES/StateSequence"></sequence>
40 <sequence content="SALOME_TYPES/StateSequence" name="SALOME_TYPES/TimeSequence"></sequence>
41 <sequence content="string" name="SALOME_TYPES/VarList"></sequence>
42 <struct name="SALOME_TYPES/ParametricInput">
43 <member type="SALOME_TYPES/VarList" name="inputVarList"></member>
44 <member type="SALOME_TYPES/VarList" name="outputVarList"></member>
45 <member type="SALOME_TYPES/TimeSequence" name="inputValues"></member>
46 <member type="SALOME_TYPES/ParameterList" name="specificParameters"></member>
48 <struct name="SALOME_TYPES/ParametricOutput">
49 <member type="SALOME_TYPES/TimeSequence" name="outputValues"></member>
50 <member type="SALOME_TYPES/ParameterList" name="specificOutputInfos"></member>
51 <member type="long" name="returnCode"></member>
52 <member type="string" name="errorMessage"></member>
56 <inline name="CreateAssimilationStudy">
61 logging.debug("CREATE Entering in CreateAssimilationStudy")
62 print "Entering in the assimilation study"
63 print "Name is set to........:", Name
64 print "Algorithm is set to...:", Algorithm
65 print "Debug is set to.......:", Debug
67 # Create Assimilation study
68 from daYacsIntegration.daStudy import *
69 assim_study = daStudy(Name, Algorithm, Debug)
71 # Algorithm parameters
77 assim_study.setAlgorithmParameters(AlgorithmParameters)
80 # print "Data entered are:"
88 logging.debug("CREATE Background is %s"%Background)
89 logging.debug("CREATE BackgroundType is %s"%BackgroundType)
90 logging.debug("CREATE BackgroundStored is %s"%BackgroundStored)
91 assim_study.setBackgroundType(BackgroundType)
92 assim_study.setBackgroundStored(BackgroundStored)
93 assim_study.setBackground(Background)
101 logging.debug("CREATE CheckingPoint is %s"%CheckingPoint)
102 logging.debug("CREATE CheckingPointType is %s"%CheckingPointType)
103 logging.debug("CREATE CheckingPointStored is %s"%CheckingPointStored)
104 assim_study.setCheckingPointType(CheckingPointType)
105 assim_study.setCheckingPointStored(CheckingPointStored)
106 assim_study.setCheckingPoint(CheckingPoint)
114 logging.debug("CREATE BackgroundError is %s"%BackgroundError)
115 logging.debug("CREATE BackgroundErrorStored is %s"%BackgroundErrorStored)
116 assim_study.setBackgroundErrorStored(BackgroundErrorStored)
117 assim_study.setBackgroundError(BackgroundError)
125 logging.debug("CREATE Observation is %s"%Observation)
126 logging.debug("CREATE ObservationType is %s"%ObservationType)
127 logging.debug("CREATE ObservationStored is %s"%ObservationStored)
128 assim_study.setObservationType(ObservationType)
129 assim_study.setObservationStored(ObservationStored)
130 assim_study.setObservation(Observation)
138 logging.debug("CREATE ObservationError is %s"%ObservationError)
139 logging.debug("CREATE ObservationErrorStored is %s"%ObservationErrorStored)
140 assim_study.setObservationErrorStored(ObservationErrorStored)
141 assim_study.setObservationError(ObservationError)
143 # ObservationOperator
144 ObservationOperatorOk = 0
150 logging.debug("CREATE ObservationOperator is %s"%ObservationOperator)
151 logging.debug("CREATE ObservationOperatorType is %s"%ObservationOperatorType)
152 assim_study.setObservationOperatorType("Matrix", ObservationOperatorType)
153 assim_study.setObservationOperator("Matrix", ObservationOperator)
154 ObservationOperatorOk = 1
156 if ObservationOperatorOk == 0:
158 ObservationOperatorDirect
162 logging.debug("CREATE ObservationOperatorDirect is %s"%ObservationOperatorDirect)
163 assim_study.setObservationOperatorType("Direct", "Function")
164 assim_study.setObservationOperator("Direct", ObservationOperatorDirect)
166 ObservationOperatorTangent
170 logging.debug("CREATE ObservationOperatorTangent is %s"%ObservationOperatorTangent)
171 assim_study.setObservationOperatorType("Tangent", "Function")
172 assim_study.setObservationOperator("Tangent", ObservationOperatorTangent)
174 ObservationOperatorAdjoint
178 logging.debug("CREATE ObservationOperatorAdjoint is %s"%ObservationOperatorAdjoint)
179 assim_study.setObservationOperatorType("Adjoint", "Function")
180 assim_study.setObservationOperator("Adjoint", ObservationOperatorAdjoint)
183 for name, size in zip(InputVariablesNames, InputVariablesSizes):
184 assim_study.setInputVariable(name, size)
185 for name, size in zip(OutputVariablesNames, OutputVariablesSizes):
186 assim_study.setOutputVariable(name, size)
189 logging.debug("CREATE Observers is %s"%observers.keys())
190 # Adding observers to the study
191 for observer_name in observers.keys():
194 number = str(observers[observer_name]["number"])
195 if "scheduler" in observers[observer_name].keys():
196 scheduler = observers[observer_name]["scheduler"]
197 if "info" in observers[observer_name].keys():
198 info = observers[observer_name]["info"]
199 assim_study.addObserver(observer_name, scheduler, info, number)
204 <inport name="Name" type="string"/>
205 <inport name="Algorithm" type="string"/>
206 <inport name="Debug" type="bool"/>
207 <inport name="InputVariablesNames" type="stringvec"/>
208 <inport name="InputVariablesSizes" type="intvec"/>
209 <inport name="OutputVariablesNames" type="stringvec"/>
210 <inport name="OutputVariablesSizes" type="intvec"/>
211 <inport name="has_observers" type="bool"/>
212 <inport name="observers" type="pyobj"/>
213 <outport name="Study" type="pyobj"/>
216 <inline name="CreateNumpyMatrixFromString">
217 <script><code><![CDATA[
218 import numpy, logging
219 logging.debug("CREATE Entering in CreateNumpyMatrixFromString")
220 matrix = numpy.matrix(matrix_in_string)
222 logging.debug("CREATE Matrix is %s"%matrix)
224 <inport name="matrix_in_string" type="string"/>
225 <outport name="matrix" type="pyobj"/>
226 <outport name="type" type="string"/>
227 <outport name="stored" type="bool"/>
230 <inline name="CreateNumpyMatrixFromScript">
231 <script><code><![CDATA[
233 logging.debug("CREATE Entering in CreateNumpyMatrixFromScript")
236 # Get file path and filename
239 filepath = os.path.dirname(script)
240 filename = os.path.basename(script)
241 module_name = os.path.splitext(filename)[0]
242 sys.path.insert(0,filepath)
245 __import__(module_name)
246 user_script_module = sys.modules[module_name]
248 # Get Data from script
250 <inport name="script" type="string"/>
251 <outport name="type" type="string"/>
252 <outport name="stored" type="bool"/>
255 <inline name="CreateNumpyVectorFromString">
256 <script><code><![CDATA[
257 import numpy, logging
258 logging.debug("CREATE Entering in CreateNumpyVectorFromString")
259 vector = numpy.matrix(vector_in_string)
261 logging.debug("Vector is %s"%vector)
263 <inport name="vector_in_string" type="string"/>
264 <outport name="vector" type="pyobj"/>
265 <outport name="type" type="string"/>
266 <outport name="stored" type="bool"/>
269 <inline name="CreateNumpyVectorFromScript">
270 <script><code><![CDATA[
272 logging.debug("CREATE Entering in CreateNumpyVectorFromScript")
275 # Get file path and filename
278 filepath = os.path.dirname(script)
279 filename = os.path.basename(script)
280 module_name = os.path.splitext(filename)[0]
281 sys.path.insert(0,filepath)
284 __import__(module_name)
285 user_script_module = sys.modules[module_name]
287 # Get Data from script
289 <inport name="script" type="string"/>
290 <outport name="type" type="string"/>
291 <outport name="stored" type="bool"/>
294 <inline name="SimpleExecuteDirectAlgorithm">
295 <script><code><![CDATA[
297 logging.debug("EXECUTE Entering in SimpleExecuteDirectAlgorithm")
298 from daYacsIntegration.daStudy import *
299 ADD = Study.getAssimilationStudy()
302 <inport name="Study" type="pyobj"/>
303 <outport name="Study" type="pyobj"/>
306 <inline name="SimpleUserAnalysis">
307 <script><code><![CDATA[
308 #-*-coding:iso-8859-1-*-
310 logging.debug("TERMINATE Entering in SimpleUserAnalysis")
311 from daYacsIntegration.daStudy import *
312 ADD = Study.getAssimilationStudy()
316 <inport name="Study" type="pyobj"/>
319 <inline name="FakeOptimizerLoopNode">
320 <script><code><![CDATA[
322 logging.debug("EXECUTE Entering in FakeOptimizerLoopNode")
325 <inport name="computation" type="SALOME_TYPES/ParametricInput"/>
326 <outport name="result" type="SALOME_TYPES/ParametricOutput"/>
329 <inline name="CreateDictFromScript">
330 <script><code><![CDATA[
332 logging.debug("CREATE Entering in CreateDictFromScript")
334 # Get file path and filename
337 filepath = os.path.dirname(script)
338 filename = os.path.basename(script)
339 module_name = os.path.splitext(filename)[0]
340 sys.path.insert(0,filepath)
343 __import__(module_name)
344 user_script_module = sys.modules[module_name]
346 # Get Data from script
348 <inport name="script" type="string"/>
351 <inline name="UserDataInitFromScript">
352 <script><code><![CDATA[
354 logging.debug("CREATE Entering in UserDataInitFromScript")
356 # Get file path and filename
359 filepath = os.path.dirname(script)
360 filename = os.path.basename(script)
361 module_name = os.path.splitext(filename)[0]
362 sys.path.insert(0,filepath)
365 __import__(module_name)
366 user_script_module = sys.modules[module_name]
368 # Get Data from script
370 <inport name="script" type="string"/>
371 <outport name="init_data" type="pyobj"/>
374 <inline name="ReadForSwitchNode">
375 <script><code><![CDATA[
377 logging.debug("CREATE Entering in ReadForSwitchNode")
379 for param in data["specificParameters"]:
380 if param["name"] == "switch_value":
381 switch_value = int(param["value"])
383 <inport name="data" type="SALOME_TYPES/ParametricInput"/>
384 <outport name="data" type="SALOME_TYPES/ParametricInput"/>
385 <outport name="switch_value" type="int"/>
388 <inline name="ExtractDataNode">
389 <script><code><![CDATA[
391 logging.debug("TERMINATE Entering in ExtractDataNode")
393 from daCore.AssimilationStudy import AssimilationStudy
396 for param in data["specificParameters"]:
397 if param["name"] == "var":
398 var = pickle.loads(param["value"])
399 if param["name"] == "info":
400 info = param["value"]
402 <inport name="data" type="SALOME_TYPES/ParametricInput"/>
403 <outport name="var" type="pyobj"/>
404 <outport name="info" type="pyobj"/>
407 <inline name="ObservationNodeString">
408 <script><code><![CDATA[
409 #print "Entering in Observation"
412 <inport name="var" type="pyobj"/>
413 <inport name="info" type="pyobj"/>
416 <inline name="ObservationNodeFile">
417 <script><code><![CDATA[
418 #print "Entering in Observation"
422 <inport name="var" type="pyobj"/>
423 <inport name="info" type="pyobj"/>
424 <inport name="script" type="string"/>
427 <inline name="EndObservationNode">
428 <script><code><![CDATA[
429 # Create a fake output object.
430 # An observer is always successful.
432 output["outputValues"] = [[[[]]]]
433 output["specificOutputInfos"] = []
434 output["returnCode"] = 0
435 output["errorMessage"] = ""
437 <outport name="output" type="SALOME_TYPES/ParametricOutput"/>
440 <inline name="SetObserversNode">
441 <script><code><![CDATA[
442 #print "Setting observers"
444 <outport name="has_observers" type="bool"/>
445 <outport name="observers" type="pyobj"/>