CDMATH/tests/validation/CMakeLists.txt

   1
   2 SET( VALIDATION_FOLDERS
   3 TransportEquation1D/1DTransportUpwindExplicit
   4 TransportEquation1D/1DTransportUpwindImplicit
   5 TransportEquation1D/1DTransportCenteredImplicit
   6 Poisson/2DPoissonEF_Delaunay_triangles
   7 Poisson/2DPoissonEF_flat_cross_triangles
   8 Poisson/2DPoissonEF_skinny_triangles
   9 Poisson/2DPoissonEF_StiffBCDisk_delaunay_triangles
  10 Poisson/2DPoissonEF_StiffBCSquare_delaunay_triangles
  11 Poisson/2DPoissonVF_Delaunay_triangles
  12 Poisson/2DPoissonVF_equilateral_triangles
  13 Poisson/2DPoissonVF_right_triangles
  14 Poisson/2DPoissonVF_cross_triangles
  15 Poisson/2DPoissonVF_skinny_triangles
  16 Poisson/2DPoissonVF_flat_cross_triangles
  17 Poisson/2DPoissonVF_checkerboard
  18 Poisson/2DPoissonVF_loc_ref
  19 Poisson/2DPoissonVF_squares
  20 Poisson/2DPoissonVF_deformedQuadrangles
  21 Poisson/2DPoissonVF_hexagons
  22 Poisson/2DPoissonVF_brickwall
  23 Poisson/2DPoissonVF_long_rectangles
  24 Poisson/2DPoissonVF_StiffBCDisk_delaunay_triangles
  25 Poisson/2DPoissonVF_StiffBCDisk_squares
  26 Poisson/2DPoissonVF_StiffBCDisk_hexagons
  27 Poisson/2DPoissonVF_StiffBCDisk_spiderWeb
  28 Poisson/2DPoissonVF_StiffBCSquare_squares
  29 Poisson/2DPoissonVF_StiffBCSquare_hexagons
  30 Poisson/2DPoissonVF_StiffBCSquare_equilateralTriangles
  31 Poisson/3DSpherePoissonEF
  32 Poisson/3DTorusPoissonEF
  33 Poisson/3DCubeSkinPoissonEF
  34 Poisson/3DPoissonEF
  35 Poisson/3DPoissonVF_checkerboard
  36 Poisson/3DPoissonVF_tetrahedra
  37 Poisson/3DPoissonVF_cubes
  38 AnisotropicDiffusion/2DDiffusionEF_Delaunay_triangles
  39 AnisotropicDiffusion/2DDiffusionEF_flat_cross_triangles
  40 AnisotropicDiffusion/2DDiffusionEF_skinny_triangles
  41 AnisotropicDiffusion/2DDiffusionVF_checkerboard
  42 AnisotropicDiffusion/2DDiffusionVF_loc_ref
  43 AnisotropicDiffusion/2DDiffusionVF_Delaunay_triangles
  44 AnisotropicDiffusion/2DDiffusionVF_squares
  45 AnisotropicDiffusion/2DDiffusionVF_deformedQuadrangles
  46 AnisotropicDiffusion/2DDiffusionVF_hexagons
  47 AnisotropicDiffusion/2DDiffusionVF_brickwall
  48 AnisotropicDiffusion/2DDiffusionVF_cross_triangles
  49 AnisotropicDiffusion/2DDiffusionVF_long_rectangles
  50 AnisotropicDiffusion/2DDiffusionVF_skinny_triangles
  51 AnisotropicDiffusion/2DDiffusionVF_flat_cross_triangles
  52 WaveSystem_stationary/2DWaveSystemPStagSquares
  53 WaveSystem_stationary/2DWaveSystemPStagDelaunayTriangles
  54 WaveSystem_stationary/2DWaveSystemPStagCrossTriangles
  55 WaveSystem_stationary/2DWaveSystemPStagFlatCrossTriangles
  56 WaveSystem_stationary/2DWaveSystemPStagCheckerboard
  57 WaveSystem_stationary/2DWaveSystemPStagBrickWall
  58 WaveSystem_stationary/2DWaveSystemPStagHexagons
  59 WaveSystem_stationary/2DWaveSystemPStagDeformedQuadrangles
  60 WaveSystem_stationary/2DWaveSystemStaggeredSquares
  61 WaveSystem_stationary/2DWaveSystemCenteredSquares
  62 WaveSystem_stationary/2DWaveSystemCenteredDelaunayTriangles
  63 WaveSystem_stationary/2DWaveSystemCenteredCrossTriangles
  64 WaveSystem_stationary/2DWaveSystemCenteredFlatCrossTriangles
  65 WaveSystem_stationary/2DWaveSystemCenteredCheckerboard
  66 WaveSystem_stationary/2DWaveSystemCenteredBrickWall
  67 WaveSystem_stationary/2DWaveSystemCenteredHexagons
  68 WaveSystem_stationary/2DWaveSystemCenteredDeformedQuadrangles
  69 WaveSystem_stationary/2DWaveSystemUpwindSquares
  70 WaveSystem_stationary/2DWaveSystemUpwindDelaunayTriangles
  71 WaveSystem_stationary/2DWaveSystemUpwindCrossTriangles
  72 WaveSystem_stationary/2DWaveSystemUpwindFlatCrossTriangles
  73 WaveSystem_stationary/2DWaveSystemUpwindCheckerboard
  74 WaveSystem_stationary/2DWaveSystemUpwindBrickWall
  75 WaveSystem_stationary/2DWaveSystemUpwindHexagons
  76 WaveSystem_stationary/2DWaveSystemUpwindDeformedQuadrangles
  77 WaveSystem_stationary_DISK/2DWaveSystemUpwindSquares_DISK
  78 WaveSystem_stationary_DISK/2DWaveSystemCenteredSquares_DISK
  79 WaveSystem_stationary_DISK/2DWaveSystemPStagSquares_DISK
  80 WaveSystem_stationary/3DWaveSystemUpwindCubes
  81 WaveSystem_stationary/3DWaveSystemUpwindTetrahedra
  82 WaveSystem_stationary_source/2DWaveSystemPStagSquares
  83 WaveSystem_stationary_source/2DWaveSystemPStagDelaunayTriangles
  84 WaveSystem_stationary_source/2DWaveSystemPStagCrossTriangles
  85 WaveSystem_stationary_source/2DWaveSystemPStagFlatCrossTriangles
  86 WaveSystem_stationary_source/2DWaveSystemPStagCheckerboard
  87 WaveSystem_stationary_source/2DWaveSystemPStagBrickWall
  88 WaveSystem_stationary_source/2DWaveSystemCenteredSquares
  89 WaveSystem_stationary_source/2DWaveSystemCenteredDelaunayTriangles
  90 WaveSystem_stationary_source/2DWaveSystemCenteredCrossTriangles
  91 WaveSystem_stationary_source/2DWaveSystemCenteredFlatCrossTriangles
  92 WaveSystem_stationary_source/2DWaveSystemCenteredCheckerboard
  93 WaveSystem_stationary_source/2DWaveSystemCenteredBrickWall
  94 WaveSystem_stationary_source/2DWaveSystemUpwindSquares
  95 WaveSystem_stationary_source/2DWaveSystemUpwindDelaunayTriangles
  96 WaveSystem_stationary_source/2DWaveSystemUpwindCrossTriangles
  97 WaveSystem_stationary_source/2DWaveSystemUpwindFlatCrossTriangles
  98 WaveSystem_stationary_source/2DWaveSystemUpwindCheckerboard
  99 WaveSystem_stationary_source/2DWaveSystemUpwindBrickWall
 100 WaveSystem_stationary_source/2DWaveSystemUpwindHexagons
 101 WaveSystem_stationary_source/2DWaveSystemUpwindDeformedQuadrangles
 102 test_synthesis
 103 )
 104
 105 IF (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO)
 106
 107   foreach(dir ${VALIDATION_FOLDERS} )
 108     ADD_SUBDIRECTORY(${dir})
 109
 110     install(
 111       DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/
 112       DESTINATION share/validation/${dir}
 113       FILES_MATCHING PATTERN "*.py"
 114                      PATTERN "*.med"
 115                      PATTERN "*_0.vtu"
 116                      PATTERN "*.json"
 117     )
 118
 119     string(FIND ${dir} "2DPoissonVF" is_2DPoissonVF)
 120     if(NOT ${is_2DPoissonVF} EQUAL -1)
 121     install(
 122       DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/
 123       DESTINATION share/doc/convergence/2DPoissonVF
 124       FILES_MATCHING PATTERN "*_SQUARE.ipynb"
 125                      PATTERN "*_SQUARE.pdf"
 126     )
 127     install(
 128       DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/
 129       DESTINATION share/doc/convergence/2DPoissonVF/${dir}
 130       FILES_MATCHING PATTERN "*.png"
 131                      PATTERN "*.ipynb"
 132                      PATTERN "*.py"
 133                      PATTERN "*.html"
 134                      PATTERN "*.pdf"
 135                      PATTERN "*.tex"
 136                      PATTERN "*.md"
 137                      PATTERN "*.xlsx"
 138                      PATTERN "*.csv"
 139                      PATTERN "*.json"
 140     )
 141     endif(NOT ${is_2DPoissonVF} EQUAL -1)
 142     string(FIND ${dir} "2DWaveSystem" is_2DWaveSystem)
 143     if(NOT ${is_2DWaveSystem} EQUAL -1)
 144     install(
 145       DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/
 146       DESTINATION share/doc/convergence/2DWaveSystemVF_stationary
 147       FILES_MATCHING PATTERN "*_SQUARE.ipynb"
 148                      PATTERN "*_SQUARE.pdf"
 149     )
 150     install(
 151       DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/
 152       DESTINATION share/doc/convergence/2DWaveSystemVF_stationary/${dir}
 153       FILES_MATCHING PATTERN "*.png"
 154                      PATTERN "*.ipynb"
 155                      PATTERN "*.py"
 156                      PATTERN "*.html"
 157                      PATTERN "*.pdf"
 158                      PATTERN "*.tex"
 159                      PATTERN "*.md"
 160                      PATTERN "*.xlsx"
 161                      PATTERN "*.csv"
 162                      PATTERN "*.json"
 163     )
 164     endif(NOT ${is_2DWaveSystem} EQUAL -1)
 165
 166     string(FIND ${dir} "2DDiffusionVF" is_2DDiffusion)
 167     if(NOT ${is_2DDiffusion} EQUAL -1)
 168     install(
 169       DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/
 170       DESTINATION share/doc/convergence/2DAnisotropicDiffusionVF
 171       FILES_MATCHING PATTERN "*_SQUARE.ipynb"
 172                      PATTERN "*_SQUARE.pdf"
 173     )
 174     install(
 175       DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/${dir}/
 176       DESTINATION share/doc/convergence/2DAnisotropicDiffusionVF/${dir}
 177       FILES_MATCHING PATTERN "*.png"
 178                      PATTERN "*.ipynb"
 179                      PATTERN "*.py"
 180                      PATTERN "*.html"
 181                      PATTERN "*.pdf"
 182                      PATTERN "*.tex"
 183                      PATTERN "*.md"
 184                      PATTERN "*.xlsx"
 185                      PATTERN "*.csv"
 186                      PATTERN "*.json"
 187     )
 188     endif(NOT ${is_2DDiffusion} EQUAL -1)
 189   endforeach(dir)
 190
 191 add_custom_target (
 192 notebook COMMAND
 193      jupyter-nbconvert --to notebook --execute ${CMAKE_CURRENT_BINARY_DIR}/test_synthesis/test_synthesis_nbook.ipynb
 194 &&   jupyter-nbconvert --to html     ${CMAKE_CURRENT_BINARY_DIR}/test_synthesis/test_synthesis_nbook.ipynb
 195 &&   jupyter-nbconvert --to pdf      ${CMAKE_CURRENT_BINARY_DIR}/test_synthesis/test_synthesis_nbook.ipynb
 196 &&   jupyter-nbconvert --to latex    ${CMAKE_CURRENT_BINARY_DIR}/test_synthesis/test_synthesis_nbook.ipynb
 197 &&   jupyter-nbconvert --to markdown ${CMAKE_CURRENT_BINARY_DIR}/test_synthesis/test_synthesis_nbook.ipynb
 198
 199 &&   jupyter-nbconvert --to notebook --execute ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_brickwall/Convergence_Poisson_FV5_SQUARE_brickwall.ipynb
 200 &&   jupyter-nbconvert --to html     ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_brickwall/Convergence_Poisson_FV5_SQUARE_brickwall.ipynb
 201 &&   jupyter-nbconvert --to pdf      ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_brickwall/Convergence_Poisson_FV5_SQUARE_brickwall.ipynb
 202 &&   jupyter-nbconvert --to latex    ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_brickwall/Convergence_Poisson_FV5_SQUARE_brickwall.ipynb
 203 &&   jupyter-nbconvert --to markdown ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_brickwall/Convergence_Poisson_FV5_SQUARE_brickwall.ipynb
 204
 205 &&   jupyter-nbconvert --to notebook --execute ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_hexagons/Convergence_Poisson_FV5_SQUARE_hexagons.ipynb
 206 &&   jupyter-nbconvert --to html     ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_hexagons/Convergence_Poisson_FV5_SQUARE_hexagons.ipynb
 207 &&   jupyter-nbconvert --to pdf      ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_hexagons/Convergence_Poisson_FV5_SQUARE_hexagons.ipynb
 208 &&   jupyter-nbconvert --to latex    ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_hexagons/Convergence_Poisson_FV5_SQUARE_hexagons.ipynb
 209 &&   jupyter-nbconvert --to markdown ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_hexagons/Convergence_Poisson_FV5_SQUARE_hexagons.ipynb
 210
 211 &&   jupyter-nbconvert --to notebook --execute ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_squares/Convergence_Poisson_FV5_SQUARE_squares.ipynb
 212 &&   jupyter-nbconvert --to html     ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_squares/Convergence_Poisson_FV5_SQUARE_squares.ipynb
 213 &&   jupyter-nbconvert --to pdf      ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_squares/Convergence_Poisson_FV5_SQUARE_squares.ipynb
 214 &&   jupyter-nbconvert --to latex    ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_squares/Convergence_Poisson_FV5_SQUARE_squares.ipynb
 215 &&   jupyter-nbconvert --to markdown ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_squares/Convergence_Poisson_FV5_SQUARE_squares.ipynb
 216
 217 &&   jupyter-nbconvert --to notebook --execute ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_triangles/Convergence_Poisson_FV5_SQUARE_triangles.ipynb
 218 &&   jupyter-nbconvert --to html     ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_triangles/Convergence_Poisson_FV5_SQUARE_triangles.ipynb
 219 &&   jupyter-nbconvert --to pdf      ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_triangles/Convergence_Poisson_FV5_SQUARE_triangles.ipynb
 220 &&   jupyter-nbconvert --to latex    ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_triangles/Convergence_Poisson_FV5_SQUARE_triangles.ipynb
 221 &&   jupyter-nbconvert --to markdown ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_triangles/Convergence_Poisson_FV5_SQUARE_triangles.ipynb
 222
 223 &&   jupyter-nbconvert --to notebook --execute ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_checkerboard/Convergence_Poisson_FV5_SQUARE_checkerboard.ipynb
 224 &&   jupyter-nbconvert --to html     ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_checkerboard/Convergence_Poisson_FV5_SQUARE_checkerboard.ipynb
 225 &&   jupyter-nbconvert --to pdf      ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_checkerboard/Convergence_Poisson_FV5_SQUARE_checkerboard.ipynb
 226 &&   jupyter-nbconvert --to latex    ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_checkerboard/Convergence_Poisson_FV5_SQUARE_checkerboard.ipynb
 227 &&   jupyter-nbconvert --to markdown ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_checkerboard/Convergence_Poisson_FV5_SQUARE_checkerboard.ipynb
 228
 229 &&   jupyter-nbconvert --to notebook --execute ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_loc_ref/Convergence_Poisson_FV5_SQUARE_loc_ref.ipynb
 230 &&   jupyter-nbconvert --to html     ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_loc_ref/Convergence_Poisson_FV5_SQUARE_loc_ref.ipynb
 231 &&   jupyter-nbconvert --to pdf      ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_loc_ref/Convergence_Poisson_FV5_SQUARE_loc_ref.ipynb
 232 &&   jupyter-nbconvert --to latex    ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_loc_ref/Convergence_Poisson_FV5_SQUARE_loc_ref.ipynb
 233 &&   jupyter-nbconvert --to markdown ${CMAKE_CURRENT_BINARY_DIR}/2DPoissonVF_loc_ref/Convergence_Poisson_FV5_SQUARE_loc_ref.ipynb
 234
 235 )
 236
 237
 238 ENDIF (CDMATH_WITH_PYTHON AND CDMATH_WITH_PETSC AND CDMATH_WITH_POSTPRO)
 239